Rh4CG257400

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
51020105 .. 51020397
293 bp
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UTR
Exon/CDS
Intron
Rh4CG257400.1

Sequence Viewer

Length: 180 bp
ATGATGATGAACGACGAATCCTCTGATGACGAGGATGAAGCAATTATGCTTGCTCTTGTTGAACAATCAATGAAGGAAGACAAGTCCCGCCGCCGACGCGGTTCTGTTGAAGTTGGTTCCCAATGCATCCCAGATGACTACCCCACACTTCCCAGAGAATCAATGCAACTTTCCATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

59

Amino Acids

6.75

Weight (kDa)

4.27

Isoelectric Point (pI)

66.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 99
AciI CCGC 3 cut(s) 88, 91, 99
AgsI TTSAA 2 cut(s) 62, 110
AloI GAACNNNNNNTCC 1 cut(s) 34
BbsI GAAGAC 1 cut(s) 84
BisI GCNGC 1 cut(s) 91
BlsI GCNGC 1 cut(s) 92
BmiI GGNNCC 1 cut(s) 118
BmsI GCATC 1 cut(s) 135
BpiI GAAGAC 1 cut(s) 84
BseGI GGATG 2 cut(s) 40, 126
Bsh1236I CGCG 1 cut(s) 99
BslFI GGGAC 1 cut(s) 70
BsmFI GGGAC 1 cut(s) 70
BspACI CCGC 3 cut(s) 88, 91, 99
BspFNI CGCG 1 cut(s) 99
BspLI GGNNCC 1 cut(s) 118
BstC8I GCNNGC 1 cut(s) 51
BstF5I GGATG 2 cut(s) 40, 126
BstFNI CGCG 1 cut(s) 99
BstMWI GCNNNNNNNGC 1 cut(s) 96
BstUI CGCG 1 cut(s) 99
BstV2I GAAGAC 1 cut(s) 84
BtsCI GGATG 2 cut(s) 40, 126
Cac8I GCNNGC 1 cut(s) 51
CseI GACGC 1 cut(s) 105
EcoT22I ATGCAT 1 cut(s) 128
FaiI YATR 1 cut(s) 47
FaqI GGGAC 1 cut(s) 70
FauI CCCGC 1 cut(s) 95
Fnu4HI GCNGC 1 cut(s) 91
FokI GGATG 2 cut(s) 47, 113
Fsp4HI GCNGC 1 cut(s) 91
GluI GCNGC 1 cut(s) 91
HgaI GACGC 1 cut(s) 105
HinfI GANTC 2 cut(s) 17, 158
Hpy188I TCNGA 1 cut(s) 25
Hpy99I CGWCG 2 cut(s) 17, 99
HpyAV CCTTC 1 cut(s) 67
HpyCH4V TGCA 2 cut(s) 126, 166
HpyF10VI GCNNNNNNNGC 1 cut(s) 96
LpnPI CCDG 2 cut(s) 144, 166
LweI GCATC 1 cut(s) 135
MboII GAAGA 1 cut(s) 89
MluCI AATT 1 cut(s) 42
MnlI CCTC 2 cut(s) 25, 31
Mph1103I ATGCAT 1 cut(s) 128
MvnI CGCG 1 cut(s) 99
MwoI GCNNNNNNNGC 1 cut(s) 96
NlaIV GGNNCC 1 cut(s) 118
NsiI ATGCAT 1 cut(s) 128
PfeI GAWTC 2 cut(s) 17, 158
PkrI GCNGC 1 cut(s) 92
PspN4I GGNNCC 1 cut(s) 118
SatI GCNGC 1 cut(s) 91
SfaNI GCATC 1 cut(s) 135
SgeI CNNG 8 cut(s) 43, 62, 68, 94, 99, 110, 143, 165
Sse9I AATT 1 cut(s) 42
SsiI CCGC 3 cut(s) 88, 91, 99
TasI AATT 1 cut(s) 42
TauI GCSGC 1 cut(s) 93
TfiI GAWTC 2 cut(s) 17, 158
TspDTI ATGAA 3 cut(s) 23, 51, 86
Zsp2I ATGCAT 1 cut(s) 128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.