Rh5AG020600

B-cell receptor-associated protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Reverse (-)
1451053 .. 1452356
1304 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG020600.1

Sequence Viewer

Length: 681 bp
ATGAGTGATCTGCTGCTTTCTTCTCTCATATTCTTAACTCTCATTGTAACGGTGAGAATATTGTCCAAGACCCCCTCCAAGTTTGTGAAGAATCAGGCCAGAATGGTCTTCTTGGTGCAATTTGTTAGGATCATGGACAAGGCTAGGGCTAGGAACTACGTTTTTGATTTACTTCTCATAGGGTTTTTCCTAGTTCTTTTTCATATGACACAAAGACTATACCGGTATATCAAAATCCTTAAACAAGAGTACTTTCTTTTTCTTGAGAAAAAAGACATCCAATTGCAGTTGTGGCACTCAAGACTCAAACAGCTTGAGTATGAAGTCAAGATTGAAACCAAAGACCTTAATGCTGCAGAAGACAACATTCTTTCTCTAAAGAAACAATTTGAAGAGTTTTGTCTCAAGTATGATCGGGTACTTGCAGAAAACTACACTTTAAGGAACCGGTTGCAGTCATCGGATATGAGACGACTACAGCTTGAAAATGAGTACGAGAGAAGGACAAAAGACGCTGTTAATGCTGCAGAAGCGAAAAGGATTGCTCGAAGTGAAGGTTTTCTTCTCGAATGTAATCGTTTAATTAAGGAAAACAAAATCTTAAGAAATCAATTGATGTCCTTGAACTGGAGATTGTCACATTTAGCTAGCAAGAGGAAATCAAGTAATTCTTTGTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000139 GO:0003674 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005794 GO:0005795 GO:0005811 GO:0005886 GO:0005887 GO:0006810 GO:0006873 GO:0006874 GO:0006875 GO:0006888 GO:0007154 GO:0007165 GO:0007204 GO:0007276 GO:0007283 GO:0008104 GO:0008150 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009967 GO:0009987 GO:0010604 GO:0010646 GO:0010647 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0012505 GO:0016020 GO:0016021 GO:0016192 GO:0019222 GO:0019722 GO:0019725 GO:0019932 GO:0019953 GO:0022414 GO:0023051 GO:0023052 GO:0023056 GO:0030003 GO:0030135 GO:0030136 GO:0030162 GO:0031090 GO:0031224 GO:0031226 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031410 GO:0031982 GO:0031984 GO:0031985 GO:0032268 GO:0032270 GO:0032386 GO:0032388 GO:0032434 GO:0032436 GO:0032469 GO:0032471 GO:0032501 GO:0032504 GO:0032580 GO:0032879 GO:0032880 GO:0033036 GO:0033157 GO:0033365 GO:0034613 GO:0035556 GO:0035584 GO:0042175 GO:0042176 GO:0042287 GO:0042288 GO:0042592 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043085 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043280 GO:0043281 GO:0044093 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0044703 GO:0044877 GO:0045732 GO:0045862 GO:0046907 GO:0048193 GO:0048232 GO:0048471 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048609 GO:0048878 GO:0050789 GO:0050790 GO:0050794 GO:0050801 GO:0050896 GO:0051049 GO:0051050 GO:0051171 GO:0051173 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051246 GO:0051247 GO:0051336 GO:0051345 GO:0051480 GO:0051560 GO:0051561 GO:0051641 GO:0051649 GO:0051704 GO:0051716 GO:0052547 GO:0052548 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0060255 GO:0060341 GO:0061136 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0070727 GO:0070861 GO:0070863 GO:0070972 GO:0070973 GO:0071944 GO:0072503 GO:0072507 GO:0080090 GO:0080134 GO:0080135 GO:0090087 GO:0090316 GO:0097038 GO:0097708 GO:0098588 GO:0098771 GO:0098791 GO:0098827 GO:1901800 GO:1902531 GO:1902533 GO:1903050 GO:1903052 GO:1903069 GO:1903071 GO:1903362 GO:1903364 GO:1903827 GO:1903829 GO:1904152 GO:1904154 GO:1904292 GO:1904294 GO:1904951 GO:1905897 GO:1905898 GO:2000058 GO:2000060 GO:2000116 GO:2001056 GO:2001233 GO:2001235 GO:2001242 GO:2001244
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

226

Amino Acids

27.08

Weight (kDa)

9.94

Isoelectric Point (pI)

49.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 137
AfaI GTAC 3 cut(s) 251, 420, 494
AfiI CCNNNNNNNGG 1 cut(s) 627
AflII CTTAAG 1 cut(s) 601
AgeI ACCGGT 2 cut(s) 222, 447
AgsI TTSAA 4 cut(s) 335, 392, 485, 625
AluBI AGCT 3 cut(s) 313, 481, 647
AluI AGCT 3 cut(s) 313, 481, 647
Alw26I GTCTC 2 cut(s) 407, 463
AlwI GGATC 1 cut(s) 137
AoxI GGCC 1 cut(s) 96
ApeKI GCWGC 3 cut(s) 13, 353, 524
AsiGI ACCGGT 2 cut(s) 222, 447
Asp700I GAANNNNTTC 1 cut(s) 558
AsuHPI GGTGA 1 cut(s) 64
AsuNHI GCTAGC 1 cut(s) 647
BbsI GAAGAC 2 cut(s) 100, 366
BbvI GCAGC 2 cut(s) 340, 511
BcoDI GTCTC 2 cut(s) 407, 463
BfaI CTAG 4 cut(s) 144, 150, 191, 648
BfmI CTRYAG 3 cut(s) 354, 476, 525
BfrI CTTAAG 1 cut(s) 601
BisI GCNGC 3 cut(s) 14, 354, 525
BlsI GCNGC 3 cut(s) 15, 355, 526
BmcAI AGTACT 1 cut(s) 251
BmiI GGNNCC 1 cut(s) 446
BmtI GCTAGC 1 cut(s) 651
BpiI GAAGAC 2 cut(s) 100, 366
BpmI CTGGAG 1 cut(s) 649
BpuEI CTTGAG 4 cut(s) 283, 284, 335, 389
BsaWI WCCGGW 2 cut(s) 222, 447
Bsc4I CCNNNNNNNGG 1 cut(s) 627
Bse118I RCCGGY 2 cut(s) 222, 447
Bse1I ACTGG 1 cut(s) 632
BseGI GGATG 1 cut(s) 276
BseLI CCNNNNNNNGG 1 cut(s) 627
BseNI ACTGG 1 cut(s) 632
BseXI GCAGC 2 cut(s) 340, 511
BshFI GGCC 1 cut(s) 98
BshTI ACCGGT 2 cut(s) 222, 447
BsiSI CCGG 2 cut(s) 223, 448
BslI CCNNNNNNNGG 1 cut(s) 627
BsmAI GTCTC 2 cut(s) 407, 463
BsmBI CGTCTC 1 cut(s) 463
BsnI GGCC 1 cut(s) 98
Bsp143I GATC 3 cut(s) 7, 129, 412
BspANI GGCC 1 cut(s) 98
BspLI GGNNCC 1 cut(s) 446
BspMAI CTGCAG 2 cut(s) 358, 529
BspOI GCTAGC 1 cut(s) 651
BspPI GGATC 1 cut(s) 137
BspTI CTTAAG 1 cut(s) 601
BsrFI RCCGGY 2 cut(s) 222, 447
BsrI ACTGG 1 cut(s) 632
BssAI RCCGGY 2 cut(s) 222, 447
BssMI GATC 3 cut(s) 7, 129, 412
Bst4CI ACNGT 1 cut(s) 52
Bst6I CTCTTC 1 cut(s) 387
BstAFI CTTAAG 1 cut(s) 601
BstC8I GCNNGC 1 cut(s) 649
BstF5I GGATG 1 cut(s) 276
BstKTI GATC 3 cut(s) 10, 132, 415
BstMAI GTCTC 2 cut(s) 407, 463
BstMBI GATC 3 cut(s) 7, 129, 412
BstMWI GCNNNNNNNGC 3 cut(s) 292, 521, 530
BstSFI CTRYAG 3 cut(s) 354, 476, 525
BstV1I GCAGC 2 cut(s) 340, 511
BstV2I GAAGAC 2 cut(s) 100, 366
BsuRI GGCC 1 cut(s) 98
BtsCI GGATG 1 cut(s) 276
Cac8I GCNNGC 1 cut(s) 649
Cfr10I RCCGGY 2 cut(s) 222, 447
CseI GACGC 1 cut(s) 521
Csp6I GTAC 3 cut(s) 250, 419, 493
CspAI ACCGGT 2 cut(s) 222, 447
CviAII CATG 1 cut(s) 133
CviJI RGCY 6 cut(s) 98, 143, 149, 313, 481, 647
CviKI_1 RGCY 6 cut(s) 98, 143, 149, 313, 481, 647
CviQI GTAC 3 cut(s) 250, 419, 493
DpnI GATC 3 cut(s) 9, 131, 414
DpnII GATC 3 cut(s) 7, 129, 412
Eam1104I CTCTTC 1 cut(s) 387
EarI CTCTTC 1 cut(s) 387
Esp3I CGTCTC 1 cut(s) 463
FaeI CATG 1 cut(s) 136
FalI AAGNNNNNCTT 3 cut(s) 546, 578, 655
FatI CATG 1 cut(s) 132
FauNDI CATATG 1 cut(s) 204
Fnu4HI GCNGC 3 cut(s) 14, 354, 525
FokI GGATG 1 cut(s) 263
Fsp4HI GCNGC 3 cut(s) 14, 354, 525
FspBI CTAG 4 cut(s) 144, 150, 191, 648
GluI GCNGC 3 cut(s) 14, 354, 525
GsuI CTGGAG 1 cut(s) 649
HaeIII GGCC 1 cut(s) 98
HapII CCGG 2 cut(s) 223, 448
HgaI GACGC 1 cut(s) 521
Hin1II CATG 1 cut(s) 136
HinfI GANTC 2 cut(s) 91, 303
HpaII CCGG 2 cut(s) 223, 448
HphI GGTGA 1 cut(s) 64
Hpy188I TCNGA 1 cut(s) 463
Hpy188III TCNNGA 4 cut(s) 263, 300, 328, 566
HpyAV CCTTC 2 cut(s) 495, 548
HpyCH4III ACNGT 1 cut(s) 52
HpyCH4IV ACGT 1 cut(s) 159
HpyCH4V TGCA 6 cut(s) 118, 286, 356, 425, 454, 527
HpyF10VI GCNNNNNNNGC 3 cut(s) 292, 521, 530
HpySE526I ACGT 1 cut(s) 159
Hsp92II CATG 1 cut(s) 136
Kzo9I GATC 3 cut(s) 7, 129, 412
LpnPI CCDG 5 cut(s) 80, 112, 236, 461, 613
Lsp1109I GCAGC 2 cut(s) 340, 511
MaeI CTAG 4 cut(s) 144, 150, 191, 648
MaeII ACGT 1 cut(s) 159
MaeIII GTNAC 2 cut(s) 46, 636
MalI GATC 3 cut(s) 9, 131, 414
MboI GATC 3 cut(s) 7, 129, 412
MboII GAAGA 6 cut(s) 12, 100, 100, 371, 404, 554
MfeI CAATTG 2 cut(s) 281, 611
MluCI AATT 6 cut(s) 119, 281, 386, 582, 611, 667
MlyI GAGTC 1 cut(s) 297
MnlI CCTC 2 cut(s) 85, 648
MroXI GAANNNNTTC 1 cut(s) 558
MseI TTAA 9 cut(s) 35, 240, 348, 440, 519, 581, 585, 602, 679
MspCI CTTAAG 1 cut(s) 601
MspI CCGG 2 cut(s) 223, 448
MunI CAATTG 2 cut(s) 281, 611
MwoI GCNNNNNNNGC 3 cut(s) 292, 521, 530
NdeI CATATG 1 cut(s) 204
NdeII GATC 3 cut(s) 7, 129, 412
NheI GCTAGC 1 cut(s) 647
NlaIII CATG 1 cut(s) 136
NlaIV GGNNCC 1 cut(s) 446
NmuCI GTSAC 1 cut(s) 636
PacI TTAATTAA 1 cut(s) 585
PdmI GAANNNNTTC 1 cut(s) 558
PfeI GAWTC 1 cut(s) 91
PinAI ACCGGT 2 cut(s) 222, 447
PkrI GCNGC 3 cut(s) 15, 355, 526
PleI GAGTC 1 cut(s) 297
PpsI GAGTC 1 cut(s) 297
PspN4I GGNNCC 1 cut(s) 446
PstI CTGCAG 2 cut(s) 358, 529
RsaI GTAC 3 cut(s) 251, 420, 494
RsaNI GTAC 3 cut(s) 250, 419, 493
SaqAI TTAA 9 cut(s) 35, 240, 348, 440, 519, 581, 585, 602, 679
SatI GCNGC 3 cut(s) 14, 354, 525
Sau3AI GATC 3 cut(s) 7, 129, 412
ScaI AGTACT 1 cut(s) 251
SchI GAGTC 1 cut(s) 297
SetI ASST 6 cut(s) 162, 315, 348, 483, 559, 649
SfcI CTRYAG 3 cut(s) 354, 476, 525
SmlI CTYRAG 5 cut(s) 263, 298, 314, 404, 601
SmoI CTYRAG 5 cut(s) 263, 298, 314, 404, 601
Sse9I AATT 6 cut(s) 119, 281, 386, 582, 611, 667
SspI AATATT 1 cut(s) 60
SspMI CTAG 4 cut(s) 144, 150, 191, 648
TaaI ACNGT 1 cut(s) 52
TaiI ACGT 1 cut(s) 162
TaqI TCGA 2 cut(s) 547, 567
TasI AATT 6 cut(s) 119, 281, 386, 582, 611, 667
TatI WGTACW 1 cut(s) 249
TfiI GAWTC 1 cut(s) 91
Tru1I TTAA 9 cut(s) 35, 240, 348, 440, 519, 581, 585, 602, 679
Tru9I TTAA 9 cut(s) 35, 240, 348, 440, 519, 581, 585, 602, 679
TseFI GTSAC 1 cut(s) 636
TseI GCWGC 3 cut(s) 13, 353, 524
Tsp45I GTSAC 1 cut(s) 636
TspDTI ATGAA 2 cut(s) 191, 336
Vha464I CTTAAG 1 cut(s) 601
XmnI GAANNNNTTC 1 cut(s) 558
XspI CTAG 4 cut(s) 144, 150, 191, 648
ZrmI AGTACT 1 cut(s) 251
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.