Rh5DG021700

B-cell receptor-associated protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
1557843 .. 1559127
1285 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG021700.1

Sequence Viewer

Length: 684 bp
ATGAGTGATCTGCTGCTTTCTTCTCTCATATTCTTAACTCTCATTGTAACGGTGAGAATATTGTCCAAGACCCCCTCCCAGTTAGTGAATAAGAATCAGGCCAGAATGGTCTTCTTGGTGCAATTTGTTAGGATCATGGACAAGGCTAGGGCTAGGAACTACGTTTTTGATTTACTTCTCCTAGGGTTATTCCTAGTCCTTTTTCAGATGACACAAAGACTATACCGGTATATCAAAATCCTTAAACAAGAGTACTTTCTTTTTCTTGAGAAAAAAGACATCCAATTGCAGTTGTGGCACTCAAGACTCAAACAGCTTGAGTATGAAGTCAAGATGGAAACCAAAGACCTTAATGCTGCAGAAGACAACATTCTTTCACTAAAGAAACAATTTGAAGAGTTTTGTCTCGAGTATGATCGGGTACTTGCAGAAAACTACACTTTAAGGAACCGGTTGCAGTCATCGGATATGAGACTCACACAGCTTGAAAATGAATACGAGAGAAAGACAAAAGACGCTGTTAATGCTGCAGAAGCGGAAAGGATTGCTCGAAGTGAAGGTTTTCTTCTCGAATGTAATCGTTTAATTAAGGAAAACAAAATGTTAAGAAATCAATTGATGTCCTTGAACTGGAGATTGTCACATTTAGCTAGCAAGAGGAAATCAAGTAATTCTTTGTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000139 GO:0003674 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005794 GO:0005795 GO:0005811 GO:0005886 GO:0005887 GO:0006810 GO:0006873 GO:0006874 GO:0006875 GO:0006888 GO:0007154 GO:0007165 GO:0007204 GO:0007276 GO:0007283 GO:0008104 GO:0008150 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009967 GO:0009987 GO:0010604 GO:0010646 GO:0010647 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0012505 GO:0016020 GO:0016021 GO:0016192 GO:0019222 GO:0019722 GO:0019725 GO:0019932 GO:0019953 GO:0022414 GO:0023051 GO:0023052 GO:0023056 GO:0030003 GO:0030135 GO:0030136 GO:0030162 GO:0031090 GO:0031224 GO:0031226 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031410 GO:0031982 GO:0031984 GO:0031985 GO:0032268 GO:0032270 GO:0032386 GO:0032388 GO:0032434 GO:0032436 GO:0032469 GO:0032471 GO:0032501 GO:0032504 GO:0032580 GO:0032879 GO:0032880 GO:0033036 GO:0033157 GO:0033365 GO:0034613 GO:0035556 GO:0035584 GO:0042175 GO:0042176 GO:0042287 GO:0042288 GO:0042592 GO:0042981 GO:0043065 GO:0043067 GO:0043068 GO:0043085 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043280 GO:0043281 GO:0044093 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044432 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0044703 GO:0044877 GO:0045732 GO:0045862 GO:0046907 GO:0048193 GO:0048232 GO:0048471 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048609 GO:0048878 GO:0050789 GO:0050790 GO:0050794 GO:0050801 GO:0050896 GO:0051049 GO:0051050 GO:0051171 GO:0051173 GO:0051179 GO:0051222 GO:0051223 GO:0051234 GO:0051246 GO:0051247 GO:0051336 GO:0051345 GO:0051480 GO:0051560 GO:0051561 GO:0051641 GO:0051649 GO:0051704 GO:0051716 GO:0052547 GO:0052548 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0060255 GO:0060341 GO:0061136 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0070727 GO:0070861 GO:0070863 GO:0070972 GO:0070973 GO:0071944 GO:0072503 GO:0072507 GO:0080090 GO:0080134 GO:0080135 GO:0090087 GO:0090316 GO:0097038 GO:0097708 GO:0098588 GO:0098771 GO:0098791 GO:0098827 GO:1901800 GO:1902531 GO:1902533 GO:1903050 GO:1903052 GO:1903069 GO:1903071 GO:1903362 GO:1903364 GO:1903827 GO:1903829 GO:1904152 GO:1904154 GO:1904292 GO:1904294 GO:1904951 GO:1905897 GO:1905898 GO:2000058 GO:2000060 GO:2000116 GO:2001056 GO:2001233 GO:2001235 GO:2001242 GO:2001244
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

227

Amino Acids

27.07

Weight (kDa)

9.59

Isoelectric Point (pI)

44.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 536
AclWI GGATC 1 cut(s) 140
AfaI GTAC 2 cut(s) 254, 423
AfiI CCNNNNNNNGG 1 cut(s) 630
AgeI ACCGGT 2 cut(s) 225, 450
AgsI TTSAA 3 cut(s) 395, 488, 628
AluBI AGCT 3 cut(s) 316, 484, 650
AluI AGCT 3 cut(s) 316, 484, 650
Alw26I GTCTC 2 cut(s) 410, 466
AlwI GGATC 1 cut(s) 140
Ama87I CYCGRG 1 cut(s) 407
AoxI GGCC 1 cut(s) 99
ApeKI GCWGC 3 cut(s) 13, 356, 527
AsiGI ACCGGT 2 cut(s) 225, 450
Asp700I GAANNNNTTC 1 cut(s) 561
AspA2I CCTAGG 1 cut(s) 181
AsuHPI GGTGA 1 cut(s) 64
AsuNHI GCTAGC 1 cut(s) 650
AvaI CYCGRG 1 cut(s) 407
AvrII CCTAGG 1 cut(s) 181
BbsI GAAGAC 2 cut(s) 103, 369
BbvI GCAGC 2 cut(s) 343, 514
BccI CCATC 1 cut(s) 328
BcoDI GTCTC 2 cut(s) 410, 466
BfaI CTAG 5 cut(s) 147, 153, 182, 194, 651
BfmI CTRYAG 2 cut(s) 357, 528
BisI GCNGC 3 cut(s) 14, 357, 528
BlnI CCTAGG 1 cut(s) 181
BlsI GCNGC 3 cut(s) 15, 358, 529
BmcAI AGTACT 1 cut(s) 254
BmeT110I CYCGRG 1 cut(s) 407
BmiI GGNNCC 1 cut(s) 449
BmrI ACTGGG 1 cut(s) 73
BmtI GCTAGC 1 cut(s) 654
BmuI ACTGGG 1 cut(s) 73
BpiI GAAGAC 2 cut(s) 103, 369
BpmI CTGGAG 1 cut(s) 652
BpuEI CTTGAG 3 cut(s) 286, 287, 338
BsaJI CCNNGG 1 cut(s) 181
BsaWI WCCGGW 2 cut(s) 225, 450
Bsc4I CCNNNNNNNGG 1 cut(s) 630
Bse118I RCCGGY 2 cut(s) 225, 450
Bse1I ACTGG 2 cut(s) 79, 635
BseDI CCNNGG 1 cut(s) 181
BseGI GGATG 1 cut(s) 279
BseLI CCNNNNNNNGG 1 cut(s) 630
BseNI ACTGG 2 cut(s) 79, 635
BseXI GCAGC 2 cut(s) 343, 514
BshFI GGCC 1 cut(s) 101
BshTI ACCGGT 2 cut(s) 225, 450
BsiHKCI CYCGRG 1 cut(s) 407
BsiSI CCGG 2 cut(s) 226, 451
BslI CCNNNNNNNGG 1 cut(s) 630
BsmAI GTCTC 2 cut(s) 410, 466
BsnI GGCC 1 cut(s) 101
BsoBI CYCGRG 1 cut(s) 407
Bsp143I GATC 3 cut(s) 7, 132, 415
BspACI CCGC 1 cut(s) 536
BspANI GGCC 1 cut(s) 101
BspLI GGNNCC 1 cut(s) 449
BspMAI CTGCAG 2 cut(s) 361, 532
BspOI GCTAGC 1 cut(s) 654
BspPI GGATC 1 cut(s) 140
BsrFI RCCGGY 2 cut(s) 225, 450
BsrI ACTGG 2 cut(s) 79, 635
BssAI RCCGGY 2 cut(s) 225, 450
BssECI CCNNGG 1 cut(s) 181
BssMI GATC 3 cut(s) 7, 132, 415
BssT1I CCWWGG 1 cut(s) 181
Bst4CI ACNGT 1 cut(s) 52
Bst6I CTCTTC 1 cut(s) 390
BstC8I GCNNGC 1 cut(s) 652
BstF5I GGATG 1 cut(s) 279
BstKTI GATC 3 cut(s) 10, 135, 418
BstMAI GTCTC 2 cut(s) 410, 466
BstMBI GATC 3 cut(s) 7, 132, 415
BstMWI GCNNNNNNNGC 3 cut(s) 295, 524, 533
BstSFI CTRYAG 2 cut(s) 357, 528
BstV1I GCAGC 2 cut(s) 343, 514
BstV2I GAAGAC 2 cut(s) 103, 369
BsuRI GGCC 1 cut(s) 101
BtsCI GGATG 1 cut(s) 279
Cac8I GCNNGC 1 cut(s) 652
Cfr10I RCCGGY 2 cut(s) 225, 450
CseI GACGC 1 cut(s) 524
Csp6I GTAC 2 cut(s) 253, 422
CspAI ACCGGT 2 cut(s) 225, 450
CviAII CATG 1 cut(s) 136
CviJI RGCY 6 cut(s) 101, 146, 152, 316, 484, 650
CviKI_1 RGCY 6 cut(s) 101, 146, 152, 316, 484, 650
CviQI GTAC 2 cut(s) 253, 422
DpnI GATC 3 cut(s) 9, 134, 417
DpnII GATC 3 cut(s) 7, 132, 415
Eam1104I CTCTTC 1 cut(s) 390
EarI CTCTTC 1 cut(s) 390
Eco130I CCWWGG 1 cut(s) 181
Eco88I CYCGRG 1 cut(s) 407
EcoT14I CCWWGG 1 cut(s) 181
ErhI CCWWGG 1 cut(s) 181
FaeI CATG 1 cut(s) 139
FaiI YATR 7 cut(s) 29, 137, 223, 231, 324, 414, 470
FalI AAGNNNNNCTT 3 cut(s) 549, 581, 658
FatI CATG 1 cut(s) 135
Fnu4HI GCNGC 3 cut(s) 14, 357, 528
FokI GGATG 1 cut(s) 266
Fsp4HI GCNGC 3 cut(s) 14, 357, 528
FspBI CTAG 5 cut(s) 147, 153, 182, 194, 651
GluI GCNGC 3 cut(s) 14, 357, 528
GsuI CTGGAG 1 cut(s) 652
HaeIII GGCC 1 cut(s) 101
HapII CCGG 2 cut(s) 226, 451
HgaI GACGC 1 cut(s) 524
Hin1II CATG 1 cut(s) 139
HinfI GANTC 3 cut(s) 94, 306, 474
HpaII CCGG 2 cut(s) 226, 451
HphI GGTGA 1 cut(s) 64
Hpy188I TCNGA 2 cut(s) 207, 466
Hpy188III TCNNGA 5 cut(s) 266, 303, 331, 407, 569
HpyAV CCTTC 1 cut(s) 551
HpyCH4III ACNGT 1 cut(s) 52
HpyCH4IV ACGT 1 cut(s) 162
HpyCH4V TGCA 6 cut(s) 121, 289, 359, 428, 457, 530
HpyF10VI GCNNNNNNNGC 3 cut(s) 295, 524, 533
HpySE526I ACGT 1 cut(s) 162
Hsp92II CATG 1 cut(s) 139
Kzo9I GATC 3 cut(s) 7, 132, 415
LpnPI CCDG 6 cut(s) 83, 92, 115, 239, 464, 616
Lsp1109I GCAGC 2 cut(s) 343, 514
MaeI CTAG 5 cut(s) 147, 153, 182, 194, 651
MaeII ACGT 1 cut(s) 162
MaeIII GTNAC 2 cut(s) 46, 639
MalI GATC 3 cut(s) 9, 134, 417
MboI GATC 3 cut(s) 7, 132, 415
MboII GAAGA 5 cut(s) 12, 103, 374, 407, 557
MfeI CAATTG 2 cut(s) 284, 614
MluCI AATT 6 cut(s) 122, 284, 389, 585, 614, 670
MlyI GAGTC 2 cut(s) 300, 468
MnlI CCTC 2 cut(s) 85, 651
MroXI GAANNNNTTC 1 cut(s) 561
MseI TTAA 9 cut(s) 35, 243, 351, 443, 522, 584, 588, 605, 682
MspI CCGG 2 cut(s) 226, 451
MunI CAATTG 2 cut(s) 284, 614
MwoI GCNNNNNNNGC 3 cut(s) 295, 524, 533
NdeII GATC 3 cut(s) 7, 132, 415
NheI GCTAGC 1 cut(s) 650
NlaIII CATG 1 cut(s) 139
NlaIV GGNNCC 1 cut(s) 449
NmuCI GTSAC 1 cut(s) 639
PacI TTAATTAA 1 cut(s) 588
PaeR7I CTCGAG 1 cut(s) 407
PdmI GAANNNNTTC 1 cut(s) 561
PfeI GAWTC 1 cut(s) 94
PinAI ACCGGT 2 cut(s) 225, 450
PkrI GCNGC 3 cut(s) 15, 358, 529
PleI GAGTC 2 cut(s) 300, 468
PpsI GAGTC 2 cut(s) 300, 468
PspN4I GGNNCC 1 cut(s) 449
PstI CTGCAG 2 cut(s) 361, 532
RsaI GTAC 2 cut(s) 254, 423
RsaNI GTAC 2 cut(s) 253, 422
SaqAI TTAA 9 cut(s) 35, 243, 351, 443, 522, 584, 588, 605, 682
SatI GCNGC 3 cut(s) 14, 357, 528
Sau3AI GATC 3 cut(s) 7, 132, 415
ScaI AGTACT 1 cut(s) 254
SchI GAGTC 2 cut(s) 300, 468
SetI ASST 6 cut(s) 165, 318, 351, 486, 562, 652
SfcI CTRYAG 2 cut(s) 357, 528
Sfr274I CTCGAG 1 cut(s) 407
SlaI CTCGAG 1 cut(s) 407
SmlI CTYRAG 4 cut(s) 266, 301, 317, 407
SmoI CTYRAG 4 cut(s) 266, 301, 317, 407
Sse9I AATT 6 cut(s) 122, 284, 389, 585, 614, 670
SsiI CCGC 1 cut(s) 536
SspI AATATT 1 cut(s) 60
SspMI CTAG 5 cut(s) 147, 153, 182, 194, 651
StyI CCWWGG 1 cut(s) 181
TaaI ACNGT 1 cut(s) 52
TaiI ACGT 1 cut(s) 165
TaqI TCGA 3 cut(s) 408, 550, 570
TasI AATT 6 cut(s) 122, 284, 389, 585, 614, 670
TatI WGTACW 1 cut(s) 252
TfiI GAWTC 1 cut(s) 94
Tru1I TTAA 9 cut(s) 35, 243, 351, 443, 522, 584, 588, 605, 682
Tru9I TTAA 9 cut(s) 35, 243, 351, 443, 522, 584, 588, 605, 682
TseFI GTSAC 1 cut(s) 639
TseI GCWGC 3 cut(s) 13, 356, 527
Tsp45I GTSAC 1 cut(s) 639
TspDTI ATGAA 2 cut(s) 339, 507
XhoI CTCGAG 1 cut(s) 407
XmaJI CCTAGG 1 cut(s) 181
XmnI GAANNNNTTC 1 cut(s) 561
XspI CTAG 5 cut(s) 147, 153, 182, 194, 651
ZrmI AGTACT 1 cut(s) 254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.