Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g13960 |
| malus_domestica | MD05G1239500.v1.1 MD10G1217700.v1.1 |
| prunus_persica | Prupe.4G126300_v2.0.a1 |
| pyrus_communis | pycom05g21580 pycom10g18360 |
| rosa_chinensis | RchiOBHm_Chr5g0023171 |
| rosa_laevigata | RLG00000032705 |
| rosa_multiflora | Rmu_sc0007300.1_g000014 |
| rosa_roxburghii | Rroxscaffold_1G00056170 |
| rosa_rugosa | Rorug05G0077700 |
| rosa_samantha | Rh5AG163900 Rh5BG163200 Rh5CG178200 Rh5DG164600 |
| rosa_wichuraiana | Rw0G018300 Rw5G014790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 186 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 255 |
| AgsI | TTSAA | 3 cut(s) | 71, 86, 165 |
| Alw21I | GWGCWC | 1 cut(s) | 157 |
| AspLEI | GCGC | 1 cut(s) | 248 |
| AspS9I | GGNCC | 1 cut(s) | 11 |
| AvaII | GGWCC | 1 cut(s) | 11 |
| BaeGI | GKGCMC | 1 cut(s) | 279 |
| BbsI | GAAGAC | 1 cut(s) | 125 |
| Bbv12I | GWGCWC | 1 cut(s) | 157 |
| BccI | CCATC | 1 cut(s) | 285 |
| BfoI | RGCGCY | 1 cut(s) | 249 |
| Bme18I | GGWCC | 1 cut(s) | 11 |
| BmgT120I | GGNCC | 1 cut(s) | 11 |
| BmsI | GCATC | 1 cut(s) | 83 |
| BpiI | GAAGAC | 1 cut(s) | 125 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 255 |
| BseGI | GGATG | 1 cut(s) | 296 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 255 |
| BseSI | GKGCMC | 1 cut(s) | 279 |
| Bsh1236I | CGCG | 1 cut(s) | 186 |
| BsiHKAI | GWGCWC | 1 cut(s) | 157 |
| BsiSI | CCGG | 1 cut(s) | 59 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 255 |
| BsmI | GAATGC | 1 cut(s) | 273 |
| Bsp1286I | GDGCHC | 2 cut(s) | 157, 279 |
| BspFNI | CGCG | 1 cut(s) | 186 |
| Bst4CI | ACNGT | 1 cut(s) | 179 |
| BstC8I | GCNNGC | 2 cut(s) | 26, 53 |
| BstF5I | GGATG | 1 cut(s) | 296 |
| BstFNI | CGCG | 1 cut(s) | 186 |
| BstH2I | RGCGCY | 1 cut(s) | 249 |
| BstHHI | GCGC | 1 cut(s) | 248 |
| BstNSI | RCATGY | 1 cut(s) | 24 |
| BstSLI | GKGCMC | 1 cut(s) | 279 |
| BstUI | CGCG | 1 cut(s) | 186 |
| BstV2I | GAAGAC | 1 cut(s) | 125 |
| BtsCI | GGATG | 1 cut(s) | 296 |
| BtsI | GCAGTG | 1 cut(s) | 157 |
| BtsIMutI | CAGTG | 1 cut(s) | 157 |
| Cac8I | GCNNGC | 2 cut(s) | 26, 53 |
| CfoI | GCGC | 1 cut(s) | 248 |
| Cfr13I | GGNCC | 1 cut(s) | 11 |
| CviAII | CATG | 4 cut(s) | 21, 35, 250, 272 |
| CviJI | RGCY | 1 cut(s) | 62 |
| CviKI_1 | RGCY | 1 cut(s) | 62 |
| Eco47I | GGWCC | 1 cut(s) | 11 |
| EcoO109I | RGGNCCY | 1 cut(s) | 11 |
| EcoT22I | ATGCAT | 1 cut(s) | 273 |
| FaeI | CATG | 4 cut(s) | 24, 38, 253, 275 |
| FaiI | YATR | 7 cut(s) | 22, 36, 128, 171, 251, 264, 273 |
| FatI | CATG | 4 cut(s) | 20, 34, 249, 271 |
| GlaI | GCGC | 1 cut(s) | 247 |
| HaeII | RGCGCY | 1 cut(s) | 249 |
| HapII | CCGG | 1 cut(s) | 59 |
| HhaI | GCGC | 1 cut(s) | 248 |
| Hin1II | CATG | 4 cut(s) | 24, 38, 253, 275 |
| Hin6I | GCGC | 1 cut(s) | 246 |
| HinP1I | GCGC | 1 cut(s) | 246 |
| HincII | GTYRAC | 1 cut(s) | 136 |
| HindII | GTYRAC | 1 cut(s) | 136 |
| HinfI | GANTC | 2 cut(s) | 100, 137 |
| HpaII | CCGG | 1 cut(s) | 59 |
| Hpy166II | GTNNAC | 1 cut(s) | 136 |
| Hpy188III | TCNNGA | 1 cut(s) | 198 |
| Hpy8I | GTNNAC | 1 cut(s) | 136 |
| HpyCH4III | ACNGT | 1 cut(s) | 179 |
| HpyCH4V | TGCA | 2 cut(s) | 173, 271 |
| Hsp92II | CATG | 4 cut(s) | 24, 38, 253, 275 |
| HspAI | GCGC | 1 cut(s) | 246 |
| LmnI | GCTCC | 1 cut(s) | 243 |
| LpnPI | CCDG | 4 cut(s) | 29, 42, 72, 211 |
| LweI | GCATC | 1 cut(s) | 83 |
| MboII | GAAGA | 1 cut(s) | 130 |
| MhlI | GDGCHC | 2 cut(s) | 157, 279 |
| MlyI | GAGTC | 1 cut(s) | 131 |
| MnlI | CCTC | 2 cut(s) | 249, 280 |
| Mph1103I | ATGCAT | 1 cut(s) | 273 |
| MslI | CAYNNNNRTG | 1 cut(s) | 164 |
| MspI | CCGG | 1 cut(s) | 59 |
| Mva1269I | GAATGC | 1 cut(s) | 273 |
| MvnI | CGCG | 1 cut(s) | 186 |
| NlaIII | CATG | 4 cut(s) | 24, 38, 253, 275 |
| NsiI | ATGCAT | 1 cut(s) | 273 |
| NspI | RCATGY | 1 cut(s) | 24 |
| PctI | GAATGC | 1 cut(s) | 273 |
| PfeI | GAWTC | 1 cut(s) | 100 |
| PleI | GAGTC | 1 cut(s) | 131 |
| PpsI | GAGTC | 1 cut(s) | 131 |
| PpuMI | RGGWCCY | 1 cut(s) | 11 |
| Psp5II | RGGWCCY | 1 cut(s) | 11 |
| PspPI | GGNCC | 1 cut(s) | 11 |
| PspPPI | RGGWCCY | 1 cut(s) | 11 |
| RseI | CAYNNNNRTG | 1 cut(s) | 164 |
| Sau96I | GGNCC | 1 cut(s) | 11 |
| SchI | GAGTC | 1 cut(s) | 131 |
| SduI | GDGCHC | 2 cut(s) | 157, 279 |
| SetI | ASST | 2 cut(s) | 13, 260 |
| SfaNI | GCATC | 1 cut(s) | 83 |
| SinI | GGWCC | 1 cut(s) | 11 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 164 |
| TaaI | ACNGT | 1 cut(s) | 179 |
| TaqII | GACCGA | 1 cut(s) | 228 |
| TfiI | GAWTC | 1 cut(s) | 100 |
| TscAI | CASTG | 1 cut(s) | 157 |
| TspDTI | ATGAA | 1 cut(s) | 92 |
| TspRI | CASTG | 1 cut(s) | 157 |
| VpaK11BI | GGWCC | 1 cut(s) | 11 |
| XceI | RCATGY | 1 cut(s) | 24 |
| Zsp2I | ATGCAT | 1 cut(s) | 273 |