ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0152111 |
| rosa_multiflora | Rmu_sc0012279.1_g000001 |
| rosa_samantha | Rh1DG047700 Rh2AG330800 Rh2BG229400 Rh3AG215600 Rh3DG242500 Rh4DG296200 Rh5AG179900 Rh5AG520100 Rh6BG112700 Rh6CG110900 Rh6DG100500 Rh7AG290600 Rh7CG220800 |
| rosa_wichuraiana | Rw2G017870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 463 |
| AcsI | RAATTY | 2 cut(s) | 58, 227 |
| AcuI | CTGAAG | 1 cut(s) | 384 |
| AfaI | GTAC | 1 cut(s) | 290 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 89, 488 |
| AgsI | TTSAA | 2 cut(s) | 226, 331 |
| AjnI | CCWGG | 2 cut(s) | 62, 444 |
| AluBI | AGCT | 5 cut(s) | 113, 173, 268, 312, 338 |
| AluI | AGCT | 5 cut(s) | 113, 173, 268, 312, 338 |
| Alw26I | GTCTC | 1 cut(s) | 421 |
| AlwI | GGATC | 1 cut(s) | 463 |
| ApeKI | GCWGC | 2 cut(s) | 110, 113 |
| ApoI | RAATTY | 2 cut(s) | 58, 227 |
| AsuC2I | CCSGG | 1 cut(s) | 261 |
| AsuHPI | GGTGA | 1 cut(s) | 131 |
| AsuII | TTCGAA | 1 cut(s) | 236 |
| AxyI | CCTNAGG | 1 cut(s) | 18 |
| BbvI | GCAGC | 2 cut(s) | 100, 122 |
| BciT130I | CCWGG | 2 cut(s) | 64, 446 |
| BcnI | CCSGG | 1 cut(s) | 261 |
| BcoDI | GTCTC | 1 cut(s) | 421 |
| BfmI | CTRYAG | 2 cut(s) | 198, 497 |
| BisI | GCNGC | 2 cut(s) | 111, 114 |
| BlsI | GCNGC | 2 cut(s) | 112, 115 |
| Bme1390I | CCNGG | 3 cut(s) | 64, 261, 446 |
| BmiI | GGNNCC | 1 cut(s) | 360 |
| BmrFI | CCNGG | 3 cut(s) | 64, 261, 446 |
| BmrI | ACTGGG | 1 cut(s) | 399 |
| BmsI | GCATC | 2 cut(s) | 156, 457 |
| BmuI | ACTGGG | 1 cut(s) | 399 |
| BpmI | CTGGAG | 1 cut(s) | 150 |
| Bpu14I | TTCGAA | 1 cut(s) | 236 |
| BpuEI | CTTGAG | 1 cut(s) | 338 |
| BpuMI | CCSGG | 1 cut(s) | 261 |
| BsaI | GGTCTC | 1 cut(s) | 421 |
| BsaJI | CCNNGG | 1 cut(s) | 260 |
| BsaWI | WCCGGW | 1 cut(s) | 244 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 272, 302 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 89, 488 |
| Bse118I | RCCGGY | 1 cut(s) | 116 |
| Bse1I | ACTGG | 2 cut(s) | 133, 394 |
| Bse21I | CCTNAGG | 1 cut(s) | 18 |
| Bse3DI | GCAATG | 1 cut(s) | 301 |
| BseBI | CCWGG | 2 cut(s) | 64, 446 |
| BseDI | CCNNGG | 1 cut(s) | 260 |
| BseGI | GGATG | 2 cut(s) | 403, 472 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 89, 488 |
| BseMI | GCAATG | 1 cut(s) | 301 |
| BseNI | ACTGG | 2 cut(s) | 133, 394 |
| BseRI | GAGGAG | 1 cut(s) | 177 |
| BseXI | GCAGC | 2 cut(s) | 100, 122 |
| BsiSI | CCGG | 3 cut(s) | 117, 245, 260 |
| BslFI | GGGAC | 2 cut(s) | 106, 173 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 89, 488 |
| BsmAI | GTCTC | 1 cut(s) | 421 |
| BsmFI | GGGAC | 2 cut(s) | 106, 173 |
| BsmI | GAATGC | 1 cut(s) | 30 |
| Bso31I | GGTCTC | 1 cut(s) | 421 |
| Bsp119I | TTCGAA | 1 cut(s) | 236 |
| Bsp1407I | TGTACA | 1 cut(s) | 288 |
| Bsp143I | GATC | 2 cut(s) | 97, 455 |
| BspHI | TCATGA | 1 cut(s) | 384 |
| BspLI | GGNNCC | 1 cut(s) | 360 |
| BspMAI | CTGCAG | 1 cut(s) | 202 |
| BspPI | GGATC | 1 cut(s) | 463 |
| BspT104I | TTCGAA | 1 cut(s) | 236 |
| BspTNI | GGTCTC | 1 cut(s) | 421 |
| BsrDI | GCAATG | 1 cut(s) | 301 |
| BsrFI | RCCGGY | 1 cut(s) | 116 |
| BsrGI | TGTACA | 1 cut(s) | 288 |
| BsrI | ACTGG | 2 cut(s) | 133, 394 |
| BssAI | RCCGGY | 1 cut(s) | 116 |
| BssECI | CCNNGG | 1 cut(s) | 260 |
| BssMI | GATC | 2 cut(s) | 97, 455 |
| Bst2UI | CCWGG | 2 cut(s) | 64, 446 |
| Bst4CI | ACNGT | 1 cut(s) | 491 |
| Bst6I | CTCTTC | 1 cut(s) | 489 |
| BstAUI | TGTACA | 1 cut(s) | 288 |
| BstBI | TTCGAA | 1 cut(s) | 236 |
| BstC8I | GCNNGC | 1 cut(s) | 171 |
| BstDEI | CTNAG | 3 cut(s) | 18, 306, 420 |
| BstF5I | GGATG | 2 cut(s) | 403, 472 |
| BstKTI | GATC | 2 cut(s) | 100, 458 |
| BstMAI | GTCTC | 1 cut(s) | 421 |
| BstMBI | GATC | 2 cut(s) | 97, 455 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 206 |
| BstNI | CCWGG | 2 cut(s) | 64, 446 |
| BstSCI | CCNGG | 3 cut(s) | 62, 259, 444 |
| BstSFI | CTRYAG | 2 cut(s) | 198, 497 |
| BstV1I | GCAGC | 2 cut(s) | 100, 122 |
| BstX2I | RGATCY | 1 cut(s) | 455 |
| BstYI | RGATCY | 1 cut(s) | 455 |
| Bsu36I | CCTNAGG | 1 cut(s) | 18 |
| BtsCI | GGATG | 2 cut(s) | 403, 472 |
| Cac8I | GCNNGC | 1 cut(s) | 171 |
| CciI | TCATGA | 1 cut(s) | 384 |
| Cfr10I | RCCGGY | 1 cut(s) | 116 |
| CseI | GACGC | 1 cut(s) | 290 |
| Csp6I | GTAC | 1 cut(s) | 289 |
| CviAII | CATG | 1 cut(s) | 385 |
| CviJI | RGCY | 7 cut(s) | 113, 173, 222, 268, 312, 338, 444 |
| CviKI_1 | RGCY | 7 cut(s) | 113, 173, 222, 268, 312, 338, 444 |
| CviQI | GTAC | 1 cut(s) | 289 |
| DdeI | CTNAG | 3 cut(s) | 18, 306, 420 |
| DpnI | GATC | 2 cut(s) | 99, 457 |
| DpnII | GATC | 2 cut(s) | 97, 455 |
| Eam1104I | CTCTTC | 1 cut(s) | 489 |
| EarI | CTCTTC | 1 cut(s) | 489 |
| Eco31I | GGTCTC | 1 cut(s) | 421 |
| Eco57I | CTGAAG | 1 cut(s) | 384 |
| Eco81I | CCTNAGG | 1 cut(s) | 18 |
| EcoRI | GAATTC | 1 cut(s) | 58 |
| EcoRII | CCWGG | 2 cut(s) | 62, 444 |
| FaeI | CATG | 1 cut(s) | 388 |
| FaqI | GGGAC | 2 cut(s) | 106, 173 |
| FatI | CATG | 1 cut(s) | 384 |
| Fnu4HI | GCNGC | 2 cut(s) | 111, 114 |
| FokI | GGATG | 2 cut(s) | 410, 479 |
| Fsp4HI | GCNGC | 2 cut(s) | 111, 114 |
| GluI | GCNGC | 2 cut(s) | 111, 114 |
| GsuI | CTGGAG | 1 cut(s) | 150 |
| HapII | CCGG | 3 cut(s) | 117, 245, 260 |
| HgaI | GACGC | 1 cut(s) | 290 |
| Hin1II | CATG | 1 cut(s) | 388 |
| HinfI | GANTC | 1 cut(s) | 320 |
| HpaII | CCGG | 3 cut(s) | 117, 245, 260 |
| HphI | GGTGA | 1 cut(s) | 131 |
| Hpy188III | TCNNGA | 4 cut(s) | 317, 341, 376, 385 |
| HpyAV | CCTTC | 3 cut(s) | 359, 446, 488 |
| HpyCH4III | ACNGT | 1 cut(s) | 491 |
| HpyCH4V | TGCA | 5 cut(s) | 28, 110, 146, 169, 200 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 206 |
| HpyF3I | CTNAG | 3 cut(s) | 18, 306, 420 |
| Hsp92II | CATG | 1 cut(s) | 388 |
| Kzo9I | GATC | 2 cut(s) | 97, 455 |
| LmnI | GCTCC | 1 cut(s) | 84 |
| Lsp1109I | GCAGC | 2 cut(s) | 100, 122 |
| LweI | GCATC | 2 cut(s) | 156, 457 |
| MaeIII | GTNAC | 1 cut(s) | 181 |
| MalI | GATC | 2 cut(s) | 99, 457 |
| MboI | GATC | 2 cut(s) | 97, 455 |
| MboII | GAAGA | 5 cut(s) | 62, 92, 440, 461, 476 |
| MflI | RGATCY | 1 cut(s) | 455 |
| MluCI | AATT | 4 cut(s) | 30, 58, 227, 238 |
| MlyI | GAGTC | 1 cut(s) | 329 |
| MnlI | CCTC | 3 cut(s) | 125, 198, 492 |
| MseI | TTAA | 1 cut(s) | 354 |
| MspA1I | CMGCKG | 1 cut(s) | 113 |
| MspI | CCGG | 3 cut(s) | 117, 245, 260 |
| MspR9I | CCNGG | 3 cut(s) | 64, 261, 446 |
| Mva1269I | GAATGC | 1 cut(s) | 30 |
| MvaI | CCWGG | 2 cut(s) | 64, 446 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 206 |
| NciI | CCSGG | 1 cut(s) | 261 |
| NdeII | GATC | 2 cut(s) | 97, 455 |
| NlaIII | CATG | 1 cut(s) | 388 |
| NlaIV | GGNNCC | 1 cut(s) | 360 |
| NspV | TTCGAA | 1 cut(s) | 236 |
| PagI | TCATGA | 1 cut(s) | 384 |
| PctI | GAATGC | 1 cut(s) | 30 |
| PfoI | TCCNGGA | 1 cut(s) | 62 |
| PkrI | GCNGC | 2 cut(s) | 112, 115 |
| PleI | GAGTC | 1 cut(s) | 328 |
| PpsI | GAGTC | 1 cut(s) | 328 |
| Psp6I | CCWGG | 2 cut(s) | 62, 444 |
| PspGI | CCWGG | 2 cut(s) | 62, 444 |
| PspN4I | GGNNCC | 1 cut(s) | 360 |
| PstI | CTGCAG | 1 cut(s) | 202 |
| PsuI | RGATCY | 1 cut(s) | 455 |
| PvuII | CAGCTG | 1 cut(s) | 113 |
| RsaI | GTAC | 1 cut(s) | 290 |
| RsaNI | GTAC | 1 cut(s) | 289 |
| SaqAI | TTAA | 1 cut(s) | 354 |
| SatI | GCNGC | 2 cut(s) | 111, 114 |
| Sau3AI | GATC | 2 cut(s) | 97, 455 |
| SchI | GAGTC | 1 cut(s) | 329 |
| ScrFI | CCNGG | 3 cut(s) | 64, 261, 446 |
| SetI | ASST | 7 cut(s) | 115, 136, 175, 270, 314, 340, 364 |
| SfaNI | GCATC | 2 cut(s) | 156, 457 |
| SfcI | CTRYAG | 2 cut(s) | 198, 497 |
| SfuI | TTCGAA | 1 cut(s) | 236 |
| SmlI | CTYRAG | 1 cut(s) | 317 |
| SmoI | CTYRAG | 1 cut(s) | 317 |
| Sse9I | AATT | 4 cut(s) | 30, 58, 227, 238 |
| StyD4I | CCNGG | 3 cut(s) | 62, 259, 444 |
| TaaI | ACNGT | 1 cut(s) | 491 |
| TaqI | TCGA | 2 cut(s) | 236, 342 |
| TasI | AATT | 4 cut(s) | 30, 58, 227, 238 |
| TatI | WGTACW | 1 cut(s) | 288 |
| Tru1I | TTAA | 1 cut(s) | 354 |
| Tru9I | TTAA | 1 cut(s) | 354 |
| TseI | GCWGC | 2 cut(s) | 110, 113 |
| TspDTI | ATGAA | 2 cut(s) | 71, 373 |
| XapI | RAATTY | 2 cut(s) | 58, 227 |