No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g44242 |
| rosa_chinensis | RchiOBHm_Chr1g0375541 |
| rosa_multiflora | Rmu_co8136822.1_g000001 Rmu_co8219862.1_g000001 Rmu_sc0003275.1_g000022 Rmu_sc0005416.1_g000026 Rmu_sc0041306.1_g000001 Rmu_sc0041306.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00043020 Rroxscaffold_5G00374040 |
| rosa_samantha | Rh5AG257200 Rh5BG259800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 128 |
| AciI | CCGC | 1 cut(s) | 134 |
| AcyI | GRCGYC | 1 cut(s) | 131 |
| AfaI | GTAC | 1 cut(s) | 180 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 153 |
| AgsI | TTSAA | 1 cut(s) | 91 |
| Alw21I | GWGCWC | 1 cut(s) | 54 |
| Alw44I | GTGCAC | 1 cut(s) | 50 |
| ApaLI | GTGCAC | 1 cut(s) | 50 |
| BaeGI | GKGCMC | 1 cut(s) | 54 |
| Bbv12I | GWGCWC | 1 cut(s) | 54 |
| BisI | GCNGC | 1 cut(s) | 134 |
| BlsI | GCNGC | 1 cut(s) | 135 |
| BmiI | GGNNCC | 1 cut(s) | 189 |
| Bpu10I | CCTNAGC | 1 cut(s) | 137 |
| BsaHI | GRCGYC | 1 cut(s) | 131 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 153 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 153 |
| BseSI | GKGCMC | 1 cut(s) | 54 |
| BsiHKAI | GWGCWC | 1 cut(s) | 54 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 153 |
| Bsp1286I | GDGCHC | 1 cut(s) | 54 |
| Bsp143I | GATC | 1 cut(s) | 96 |
| BspACI | CCGC | 1 cut(s) | 134 |
| BspLI | GGNNCC | 1 cut(s) | 189 |
| BssMI | GATC | 1 cut(s) | 96 |
| BssNI | GRCGYC | 1 cut(s) | 131 |
| Bst4CI | ACNGT | 1 cut(s) | 126 |
| BstACI | GRCGYC | 1 cut(s) | 131 |
| BstDEI | CTNAG | 2 cut(s) | 137, 166 |
| BstKTI | GATC | 1 cut(s) | 99 |
| BstMBI | GATC | 1 cut(s) | 96 |
| BstSLI | GKGCMC | 1 cut(s) | 54 |
| CseI | GACGC | 1 cut(s) | 139 |
| Csp6I | GTAC | 1 cut(s) | 179 |
| CviQI | GTAC | 1 cut(s) | 179 |
| DdeI | CTNAG | 2 cut(s) | 137, 166 |
| DpnI | GATC | 1 cut(s) | 98 |
| DpnII | GATC | 1 cut(s) | 96 |
| FaiI | YATR | 4 cut(s) | 17, 66, 111, 196 |
| FblI | GTMKAC | 1 cut(s) | 128 |
| Fnu4HI | GCNGC | 1 cut(s) | 134 |
| Fsp4HI | GCNGC | 1 cut(s) | 134 |
| GluI | GCNGC | 1 cut(s) | 134 |
| HgaI | GACGC | 1 cut(s) | 139 |
| Hin1I | GRCGYC | 1 cut(s) | 131 |
| HincII | GTYRAC | 1 cut(s) | 129 |
| HindII | GTYRAC | 1 cut(s) | 129 |
| HinfI | GANTC | 1 cut(s) | 5 |
| Hpy166II | GTNNAC | 2 cut(s) | 52, 129 |
| Hpy8I | GTNNAC | 2 cut(s) | 52, 129 |
| Hpy99I | CGWCG | 2 cut(s) | 130, 133 |
| HpyAV | CCTTC | 1 cut(s) | 169 |
| HpyCH4III | ACNGT | 1 cut(s) | 126 |
| HpyCH4V | TGCA | 1 cut(s) | 52 |
| HpyF3I | CTNAG | 2 cut(s) | 137, 166 |
| Hsp92I | GRCGYC | 1 cut(s) | 131 |
| Kzo9I | GATC | 1 cut(s) | 96 |
| MalI | GATC | 1 cut(s) | 98 |
| MboI | GATC | 1 cut(s) | 96 |
| MboII | GAAGA | 3 cut(s) | 44, 103, 106 |
| MhlI | GDGCHC | 1 cut(s) | 54 |
| MluCI | AATT | 1 cut(s) | 81 |
| MnlI | CCTC | 1 cut(s) | 178 |
| MseI | TTAA | 2 cut(s) | 27, 42 |
| NdeII | GATC | 1 cut(s) | 96 |
| NlaIV | GGNNCC | 1 cut(s) | 189 |
| PfeI | GAWTC | 1 cut(s) | 5 |
| PkrI | GCNGC | 1 cut(s) | 135 |
| PspN4I | GGNNCC | 1 cut(s) | 189 |
| RsaI | GTAC | 1 cut(s) | 180 |
| RsaNI | GTAC | 1 cut(s) | 179 |
| SalI | GTCGAC | 1 cut(s) | 127 |
| SaqAI | TTAA | 2 cut(s) | 27, 42 |
| SatI | GCNGC | 1 cut(s) | 134 |
| Sau3AI | GATC | 1 cut(s) | 96 |
| SduI | GDGCHC | 1 cut(s) | 54 |
| SetI | ASST | 1 cut(s) | 180 |
| SgeI | CNNG | 4 cut(s) | 68, 100, 184, 194 |
| SgrDI | CGTCGACG | 1 cut(s) | 127 |
| Sse9I | AATT | 1 cut(s) | 81 |
| SsiI | CCGC | 1 cut(s) | 134 |
| TaaI | ACNGT | 1 cut(s) | 126 |
| TaqI | TCGA | 1 cut(s) | 128 |
| TasI | AATT | 1 cut(s) | 81 |
| TauI | GCSGC | 1 cut(s) | 136 |
| TfiI | GAWTC | 1 cut(s) | 5 |
| Tru1I | TTAA | 2 cut(s) | 27, 42 |
| Tru9I | TTAA | 2 cut(s) | 27, 42 |
| VneI | GTGCAC | 1 cut(s) | 50 |
| XmiI | GTMKAC | 1 cut(s) | 128 |