pyridoxal biosynthesis protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G60540 |
| fragaria_vesca | FvH4_3g32570 FvH4_3g32570 FvH4_3g32570 FvH4_3g32570 FvH4_3g32570 FvH4_3g32570 |
| malus_domestica | MD03G1113000.v1.1 MD11G1133800.v1.1 |
| prunus_persica | Prupe.6G100100_v2.0.a1 |
| pyrus_communis | pycom11g11030 |
| rosa_chinensis | RchiOBHm_Chr5g0059641 |
| rosa_laevigata | RLG00000035317 |
| rosa_multiflora | Rmu_sc0001146.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00020970 |
| rosa_rugosa | Rorug05G0323800 |
| rosa_samantha | Rh5AG389100 Rh5BG400800 Rh5DG417200 |
| rosa_wichuraiana | Rw5G036630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 3 cut(s) | 328, 541, 586 |
| AcuI | CTGAAG | 2 cut(s) | 332, 426 |
| AfaI | GTAC | 2 cut(s) | 173, 375 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 227 |
| AgsI | TTSAA | 4 cut(s) | 467, 513, 527, 652 |
| AjnI | CCWGG | 3 cut(s) | 133, 471, 517 |
| AluBI | AGCT | 6 cut(s) | 106, 163, 266, 346, 382, 494 |
| AluI | AGCT | 6 cut(s) | 106, 163, 266, 346, 382, 494 |
| Alw21I | GWGCWC | 2 cut(s) | 149, 436 |
| Alw26I | GTCTC | 1 cut(s) | 353 |
| AoxI | GGCC | 5 cut(s) | 3, 117, 218, 304, 529 |
| ApeKI | GCWGC | 1 cut(s) | 103 |
| ApoI | RAATTY | 3 cut(s) | 328, 541, 586 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 411 |
| AspS9I | GGNCC | 3 cut(s) | 4, 401, 455 |
| AsuII | TTCGAA | 1 cut(s) | 389 |
| AsuNHI | GCTAGC | 1 cut(s) | 592 |
| AvaII | GGWCC | 2 cut(s) | 401, 455 |
| BanII | GRGCYC | 1 cut(s) | 35 |
| Bbv12I | GWGCWC | 2 cut(s) | 149, 436 |
| BbvI | GCAGC | 1 cut(s) | 115 |
| BccI | CCATC | 3 cut(s) | 205, 627, 649 |
| BciT130I | CCWGG | 3 cut(s) | 135, 473, 519 |
| BcoDI | GTCTC | 1 cut(s) | 353 |
| BfaI | CTAG | 3 cut(s) | 308, 593, 710 |
| BfmI | CTRYAG | 1 cut(s) | 267 |
| BglII | AGATCT | 1 cut(s) | 706 |
| BisI | GCNGC | 1 cut(s) | 104 |
| BlsI | GCNGC | 1 cut(s) | 105 |
| Bme1390I | CCNGG | 3 cut(s) | 135, 473, 519 |
| Bme18I | GGWCC | 2 cut(s) | 401, 455 |
| BmgT120I | GGNCC | 3 cut(s) | 4, 401, 455 |
| BmiI | GGNNCC | 2 cut(s) | 232, 676 |
| BmrFI | CCNGG | 3 cut(s) | 135, 473, 519 |
| BmrI | ACTGGG | 1 cut(s) | 737 |
| BmtI | GCTAGC | 1 cut(s) | 596 |
| BmuI | ACTGGG | 1 cut(s) | 737 |
| BpmI | CTGGAG | 1 cut(s) | 156 |
| Bpu14I | TTCGAA | 1 cut(s) | 389 |
| BpuEI | CTTGAG | 2 cut(s) | 467, 664 |
| BsaBI | GATNNNNATC | 1 cut(s) | 513 |
| BsaJI | CCNNGG | 2 cut(s) | 133, 153 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 227 |
| Bse1I | ACTGG | 1 cut(s) | 743 |
| Bse8I | GATNNNNATC | 1 cut(s) | 513 |
| BseBI | CCWGG | 3 cut(s) | 135, 473, 519 |
| BseDI | CCNNGG | 2 cut(s) | 133, 153 |
| BseGI | GGATG | 1 cut(s) | 426 |
| BseJI | GATNNNNATC | 1 cut(s) | 513 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 227 |
| BseMII | CTCAG | 2 cut(s) | 50, 543 |
| BseNI | ACTGG | 1 cut(s) | 743 |
| BseRI | GAGGAG | 1 cut(s) | 153 |
| BseXI | GCAGC | 1 cut(s) | 115 |
| BseYI | CCCAGC | 2 cut(s) | 67, 490 |
| BsgI | GTGCAG | 1 cut(s) | 723 |
| BshFI | GGCC | 5 cut(s) | 5, 119, 220, 306, 531 |
| BsiHKAI | GWGCWC | 2 cut(s) | 149, 436 |
| BslFI | GGGAC | 1 cut(s) | 473 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 227 |
| BsmAI | GTCTC | 1 cut(s) | 353 |
| BsmFI | GGGAC | 1 cut(s) | 473 |
| BsnI | GGCC | 5 cut(s) | 5, 119, 220, 306, 531 |
| Bsp119I | TTCGAA | 1 cut(s) | 389 |
| Bsp1286I | GDGCHC | 3 cut(s) | 35, 149, 436 |
| Bsp143I | GATC | 1 cut(s) | 706 |
| Bsp19I | CCATGG | 1 cut(s) | 153 |
| BspANI | GGCC | 5 cut(s) | 5, 119, 220, 306, 531 |
| BspCNI | CTCAG | 2 cut(s) | 51, 544 |
| BspLI | GGNNCC | 2 cut(s) | 232, 676 |
| BspOI | GCTAGC | 1 cut(s) | 596 |
| BspT104I | TTCGAA | 1 cut(s) | 389 |
| BsrI | ACTGG | 1 cut(s) | 743 |
| BssECI | CCNNGG | 2 cut(s) | 133, 153 |
| BssMI | GATC | 1 cut(s) | 706 |
| BssT1I | CCWWGG | 1 cut(s) | 153 |
| Bst2UI | CCWGG | 3 cut(s) | 135, 473, 519 |
| BstBI | TTCGAA | 1 cut(s) | 389 |
| BstC8I | GCNNGC | 5 cut(s) | 17, 21, 165, 384, 594 |
| BstDEI | CTNAG | 3 cut(s) | 59, 253, 552 |
| BstDSI | CCRYGG | 1 cut(s) | 153 |
| BstF5I | GGATG | 1 cut(s) | 426 |
| BstKTI | GATC | 1 cut(s) | 709 |
| BstMAI | GTCTC | 1 cut(s) | 353 |
| BstMBI | GATC | 1 cut(s) | 706 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 64, 164, 263, 312, 701 |
| BstNI | CCWGG | 3 cut(s) | 135, 473, 519 |
| BstSCI | CCNGG | 3 cut(s) | 133, 471, 517 |
| BstSFI | CTRYAG | 1 cut(s) | 267 |
| BstV1I | GCAGC | 1 cut(s) | 115 |
| BstX2I | RGATCY | 1 cut(s) | 706 |
| BstYI | RGATCY | 1 cut(s) | 706 |
| BsuRI | GGCC | 5 cut(s) | 5, 119, 220, 306, 531 |
| BtgI | CCRYGG | 1 cut(s) | 153 |
| BtsCI | GGATG | 1 cut(s) | 426 |
| BtsI | GCAGTG | 1 cut(s) | 60 |
| BtsIMutI | CAGTG | 1 cut(s) | 60 |
| Cac8I | GCNNGC | 5 cut(s) | 17, 21, 165, 384, 594 |
| Cfr13I | GGNCC | 3 cut(s) | 4, 401, 455 |
| Csp6I | GTAC | 2 cut(s) | 172, 374 |
| CviAII | CATG | 3 cut(s) | 154, 316, 533 |
| CviQI | GTAC | 2 cut(s) | 172, 374 |
| DdeI | CTNAG | 3 cut(s) | 59, 253, 552 |
| DpnI | GATC | 1 cut(s) | 708 |
| DpnII | GATC | 1 cut(s) | 706 |
| DraI | TTTAAA | 1 cut(s) | 717 |
| Eco130I | CCWWGG | 1 cut(s) | 153 |
| Eco147I | AGGCCT | 2 cut(s) | 220, 306 |
| Eco24I | GRGCYC | 1 cut(s) | 35 |
| Eco47I | GGWCC | 2 cut(s) | 401, 455 |
| Eco57I | CTGAAG | 2 cut(s) | 332, 426 |
| EcoRII | CCWGG | 3 cut(s) | 133, 471, 517 |
| EcoT14I | CCWWGG | 1 cut(s) | 153 |
| EcoT38I | GRGCYC | 1 cut(s) | 35 |
| ErhI | CCWWGG | 1 cut(s) | 153 |
| FaeI | CATG | 3 cut(s) | 157, 319, 536 |
| FaiI | YATR | 8 cut(s) | 50, 128, 155, 248, 317, 534, 639, 754 |
| FaqI | GGGAC | 1 cut(s) | 473 |
| FatI | CATG | 3 cut(s) | 153, 315, 532 |
| Fnu4HI | GCNGC | 1 cut(s) | 104 |
| FokI | GGATG | 1 cut(s) | 413 |
| FriOI | GRGCYC | 1 cut(s) | 35 |
| Fsp4HI | GCNGC | 1 cut(s) | 104 |
| FspBI | CTAG | 3 cut(s) | 308, 593, 710 |
| GluI | GCNGC | 1 cut(s) | 104 |
| GsaI | CCCAGC | 2 cut(s) | 71, 494 |
| GsuI | CTGGAG | 1 cut(s) | 156 |
| HaeIII | GGCC | 5 cut(s) | 5, 119, 220, 306, 531 |
| Hin1II | CATG | 3 cut(s) | 157, 319, 536 |
| HinfI | GANTC | 1 cut(s) | 509 |
| Hpy166II | GTNNAC | 1 cut(s) | 322 |
| Hpy188I | TCNGA | 2 cut(s) | 351, 553 |
| Hpy188III | TCNNGA | 3 cut(s) | 404, 649, 710 |
| Hpy8I | GTNNAC | 1 cut(s) | 322 |
| Hpy99I | CGWCG | 1 cut(s) | 14 |
| HpyAV | CCTTC | 8 cut(s) | 57, 70, 385, 389, 499, 521, 613, 665 |
| HpyCH4IV | ACGT | 1 cut(s) | 114 |
| HpyCH4V | TGCA | 3 cut(s) | 315, 440, 704 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 64, 164, 263, 312, 701 |
| HpyF3I | CTNAG | 3 cut(s) | 59, 253, 552 |
| HpySE526I | ACGT | 1 cut(s) | 114 |
| Hsp92II | CATG | 3 cut(s) | 157, 319, 536 |
| Kzo9I | GATC | 1 cut(s) | 706 |
| LmnI | GCTCC | 2 cut(s) | 439, 674 |
| Lsp1109I | GCAGC | 1 cut(s) | 115 |
| MaeI | CTAG | 3 cut(s) | 308, 593, 710 |
| MaeII | ACGT | 1 cut(s) | 114 |
| MaeIII | GTNAC | 1 cut(s) | 641 |
| MalI | GATC | 1 cut(s) | 708 |
| MboI | GATC | 1 cut(s) | 706 |
| MboII | GAAGA | 2 cut(s) | 568, 664 |
| MflI | RGATCY | 1 cut(s) | 706 |
| MhlI | GDGCHC | 3 cut(s) | 35, 149, 436 |
| MluCI | AATT | 3 cut(s) | 328, 541, 586 |
| MmeI | TCCRAC | 1 cut(s) | 280 |
| MroXI | GAANNNNTTC | 1 cut(s) | 411 |
| MseI | TTAA | 2 cut(s) | 207, 716 |
| MslI | CAYNNNNRTG | 2 cut(s) | 53, 152 |
| MspR9I | CCNGG | 3 cut(s) | 135, 473, 519 |
| MvaI | CCWGG | 3 cut(s) | 135, 473, 519 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 64, 164, 263, 312, 701 |
| NcoI | CCATGG | 1 cut(s) | 153 |
| NdeII | GATC | 1 cut(s) | 706 |
| NheI | GCTAGC | 1 cut(s) | 592 |
| NlaIII | CATG | 3 cut(s) | 157, 319, 536 |
| NlaIV | GGNNCC | 2 cut(s) | 232, 676 |
| NmeAIII | GCCGAG | 1 cut(s) | 193 |
| NspV | TTCGAA | 1 cut(s) | 389 |
| PceI | AGGCCT | 2 cut(s) | 220, 306 |
| PdmI | GAANNNNTTC | 1 cut(s) | 411 |
| PfeI | GAWTC | 1 cut(s) | 509 |
| PkrI | GCNGC | 1 cut(s) | 105 |
| Psp6I | CCWGG | 3 cut(s) | 133, 471, 517 |
| PspFI | CCCAGC | 2 cut(s) | 67, 490 |
| PspGI | CCWGG | 3 cut(s) | 133, 471, 517 |
| PspN4I | GGNNCC | 2 cut(s) | 232, 676 |
| PspPI | GGNCC | 3 cut(s) | 4, 401, 455 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 357, 389 |
| PsuI | RGATCY | 1 cut(s) | 706 |
| RsaI | GTAC | 2 cut(s) | 173, 375 |
| RsaNI | GTAC | 2 cut(s) | 172, 374 |
| RseI | CAYNNNNRTG | 2 cut(s) | 53, 152 |
| SaqAI | TTAA | 2 cut(s) | 207, 716 |
| SatI | GCNGC | 1 cut(s) | 104 |
| Sau3AI | GATC | 1 cut(s) | 706 |
| Sau96I | GGNCC | 3 cut(s) | 4, 401, 455 |
| ScrFI | CCNGG | 3 cut(s) | 135, 473, 519 |
| SduI | GDGCHC | 3 cut(s) | 35, 149, 436 |
| SfcI | CTRYAG | 1 cut(s) | 267 |
| SfuI | TTCGAA | 1 cut(s) | 389 |
| SinI | GGWCC | 2 cut(s) | 401, 455 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 53, 152 |
| SmlI | CTYRAG | 2 cut(s) | 446, 679 |
| SmoI | CTYRAG | 2 cut(s) | 446, 679 |
| Sse9I | AATT | 3 cut(s) | 328, 541, 586 |
| SseBI | AGGCCT | 2 cut(s) | 220, 306 |
| SspMI | CTAG | 3 cut(s) | 308, 593, 710 |
| StuI | AGGCCT | 2 cut(s) | 220, 306 |
| StyD4I | CCNGG | 3 cut(s) | 133, 471, 517 |
| StyI | CCWWGG | 1 cut(s) | 153 |
| TaiI | ACGT | 1 cut(s) | 117 |
| TaqI | TCGA | 3 cut(s) | 108, 389, 631 |
| TasI | AATT | 3 cut(s) | 328, 541, 586 |
| TfiI | GAWTC | 1 cut(s) | 509 |
| Tru1I | TTAA | 2 cut(s) | 207, 716 |
| Tru9I | TTAA | 2 cut(s) | 207, 716 |
| TscAI | CASTG | 1 cut(s) | 60 |
| TseI | GCWGC | 1 cut(s) | 103 |
| TspDTI | ATGAA | 1 cut(s) | 415 |
| TspGWI | ACGGA | 1 cut(s) | 419 |
| TspRI | CASTG | 1 cut(s) | 60 |
| VpaK11BI | GGWCC | 2 cut(s) | 401, 455 |
| XapI | RAATTY | 3 cut(s) | 328, 541, 586 |
| XbaI | TCTAGA | 1 cut(s) | 709 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 498 |
| XmnI | GAANNNNTTC | 1 cut(s) | 411 |
| XspI | CTAG | 3 cut(s) | 308, 593, 710 |