Rh5BG287300

Belongs to the pirin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0008258
Physical Location & Seq
Forward (+)
36580318 .. 36602724
22407 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG287300.1

Sequence Viewer

Length: 1920 bp
ATGAAAACTTTCAATGTAAACCAATATGGTGGTGTTGCAGATGGAAAAACTGATAACAGCAAGGCTTTTACTGATGCATGGAATCAAGCTTGCCAAAACAATGGAGGTGGTGTGGTCTTGTTTCAACAAGGGATATATTTGGTGAACCCTTTGGTTATAGAAGGCTCTTGCAAGGGACCGATGGAGTTGCAGATCCAGGGTACCTTATTGGCTTCAAGGGAGTACCAGTACTCGGTTGGTATTGACCATTGGATCGTCTTCCGATACATTGACAACTTAGTAATTAGTGGTGGAGGGACGTTCGATGGCCAAGGAGCCTCTTCTTGGCCCTATAACGACTGTCGCAAAAACCCACAGTGCAAGGCACTGCCTGCGTCATTGAGGTTCGACTTTGCCAATAATACAAAGATCGACAACATAACTCTCATCAACAGCAAGAACACCAACATCCACCTTTTCGCAGGTCTTAATGTGATAATCAGCAACATTAACATAAGTGCCCCGGCCGATAGCCCCAACACCGATGGAATCAAAGTCGGTAGTTCAAGCATCGTCCAAATATATGATTCTATAATATCCACCGGAGATGACTGCATAGCTTTCCTTCCTGAATCAACCAACCTTAACGTTACTAACGTTCACTGCGGGCCTGGCCATGGAATTAGTGTAGGAAGCATTTCCAGTAACTCTATTACTGGCTTGAACGTAAGGAATTGCAGCTTCGTAGGTACTCAGAATGGTGTTAGAATCAAGACGAAGAGTCCCTCTCAACAAGGAACTGTTGCACAAGTTACATTTGAAAACATTGAAATGGACAAGGTCAATAATCCCATCATCATTGATCAACAATATTGCGCTAGTAGTGGCTGTAGTCCACGGAAAACTTCGGAGATTCAGATTACTGATGTGAAGTACAATAACATTTGGGGTACTTCAAACACAAAAATTGCAGTTTTACTCAAATGTAGCGAAAATAAACCTTGCCAGAACATCGAGTTGAGGGATATCGACCTAAATTACAGAGGAGAAGTTTCACTTGGTTTTAAAGAAGGTCGAGTTGTGGTGAGGAAGTTCTTGGCTAGGCCTCAGCATGAAGGAGTTGGTGCCATTGTTAGAAGAAGCATTGGGAGGTTTGAGCTGAGATACTTTGATCCTTTTCTTGTTCTGGATGAGTTCTCAGTTACTGCTCCTGCTGGATTCCCTGATCATCCACATAGAGGGTTTGAGACGGTGACCTACATGTTGCAGGGAGCCATCACACATGAAGATTTCGAAGGGCACAAAGGGACGATAGGAGCCGGCGATGTGCAGTGGATGACTGCAGGTAGAGGTATTGTTCACTCGGAAATGCCTGCAGCCCAAGGAACCCAAAAGGGTCTACAGTTGTGGATAAACCTCTCCTCCAAACATAAAATGATTGAGCCAAAGTACCAAGAAATGGTCAGCAAGGACATTGCAGAGGCTACAAAAGATGGGATCGAGGTTAGAGTGATAGCAGGAGAAGCCTTGGGAACAAAGTCACCAATCTACACAAGAACCCCAACCATGTACTTGGACTTCACTCTCAAACCAGGAGCTCACCTTCAGCAACCAATACCAACATCATGGAATGCATTTGTATACGTCTTGGAGGGGGAGGGCATTTTTGGAACTCCAAAGTCATTGCCAGTGGCAGGTCACCACCTTCTTCTTTTAGGATCTGGGGATGGGTTGGAGGCATGGAACATGTCTTCCAAGAACCTTAGGTTTATATTAGTTGGAGGTCAACCTTTGGGGGAGCCTGTAAAGCAACTAGGGCCCTTTGTGATGAACACTGAGGAAGAGATTGATCAAACCATTGATGACTTTGAAAACTGTGTCAATGGATTTGAGAAGGCAACACATTGGAGATCTGGATCTGCACTTAGCCTTGATTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pirin Pirin_C

Protein Analysis

639

Amino Acids

69.79

Weight (kDa)

5.87

Isoelectric Point (pI)

37.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pect-lyase_RHGA_epim PF12708 4 - 240 1.7e-06 Rhamnogalacturonase A/epimerase, pectate lyase-like
Glyco_hydro_28 PF00295 45 - 344 1.7e-88 Glycosyl hydrolases family 28
Pirin PF02678 371 - 464 2.1e-31 Pirin
Pirin_C PF05726 517 - 621 5.8e-31 Pirin C-terminal cupin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 452, 1313, 1664
Acc65I GGTACC 1 cut(s) 200
AccB1I GGYRCC 2 cut(s) 200, 1103
AccB7I CCANNNNNTGG 1 cut(s) 1438
AccI GTMKAC 2 cut(s) 1378, 1620
AciI CCGC 1 cut(s) 645
AclI AACGTT 2 cut(s) 627, 636
AclWI GGATC 6 cut(s) 187, 260, 1145, 1484, 1705, 1903
AcoI YGGCCR 3 cut(s) 307, 504, 652
AcuI CTGAAG 1 cut(s) 1568
AfaI GTAC 8 cut(s) 202, 224, 230, 730, 914, 931, 1430, 1550
AfiI CCNNNNNNNGG 6 cut(s) 232, 324, 656, 1217, 1438, 1673
AflIII ACRYGT 2 cut(s) 1239, 1725
AgsI TTSAA 9 cut(s) 13, 125, 216, 546, 703, 800, 809, 936, 1850
AhdI GACNNNNNGTC 1 cut(s) 759
AjnI CCWGG 3 cut(s) 195, 649, 1570
AjuI GAANNNNNNNTTGG 2 cut(s) 1020, 1052
AloI GAACNNNNNNTCC 2 cut(s) 1715, 1747
AluBI AGCT 5 cut(s) 89, 599, 720, 1138, 1577
AluI AGCT 5 cut(s) 89, 599, 720, 1138, 1577
Alw21I GWGCWC 1 cut(s) 1579
Alw26I GTCTC 1 cut(s) 1220
AlwI GGATC 6 cut(s) 187, 260, 1145, 1484, 1705, 1903
AlwNI CAGNNNCTG 1 cut(s) 1184
AoxI GGCC 7 cut(s) 307, 326, 504, 647, 652, 1082, 1796
ApaI GGGCCC 1 cut(s) 1800
ApeKI GCWGC 2 cut(s) 717, 1355
Asp700I GAANNNNTTC 2 cut(s) 8, 676
Asp718I GGTACC 1 cut(s) 200
AspLEI GCGC 1 cut(s) 857
AspS9I GGNCC 5 cut(s) 176, 327, 647, 1796, 1797
AsuC2I CCSGG 1 cut(s) 503
AsuHPI GGTGA 6 cut(s) 154, 1075, 1243, 1512, 1571, 1670
AsuII TTCGAA 1 cut(s) 1272
AvaII GGWCC 1 cut(s) 176
AxyI CCTNAGG 1 cut(s) 1742
BaeGI GKGCMC 3 cut(s) 502, 1281, 1800
BalI TGGCCA 2 cut(s) 309, 654
BanI GGYRCC 2 cut(s) 200, 1103
BanII GRGCYC 2 cut(s) 1579, 1800
BarI GAAGNNNNNNTAC 2 cut(s) 1541, 1573
BbsI GAAGAC 2 cut(s) 250, 1722
Bbv12I GWGCWC 1 cut(s) 1579
BbvCI CCTCAGC 1 cut(s) 1086
BbvI GCAGC 2 cut(s) 729, 1367
BccI CCATC 8 cut(s) 35, 175, 299, 518, 839, 1262, 1466, 1700
BcgI CGANNNNNNTGC 2 cut(s) 169, 203
BciT130I CCWGG 3 cut(s) 197, 651, 1572
BclI TGATCA 3 cut(s) 841, 1204, 1828
BcnI CCSGG 1 cut(s) 503
BcoDI GTCTC 1 cut(s) 1220
BfaI CTAG 3 cut(s) 858, 1080, 1793
BfmI CTRYAG 4 cut(s) 868, 1320, 1353, 1379
BfuAI ACCTGC 3 cut(s) 452, 1313, 1664
BglII AGATCT 1 cut(s) 1889
BisI GCNGC 2 cut(s) 718, 1356
BlsI GCNGC 2 cut(s) 719, 1357
BmcAI AGTACT 1 cut(s) 230
Bme1390I CCNGG 4 cut(s) 197, 503, 651, 1572
Bme18I GGWCC 1 cut(s) 176
BmeRI GACNNNNNGTC 1 cut(s) 759
BmgT120I GGNCC 5 cut(s) 176, 327, 647, 1796, 1797
BmiI GGNNCC 9 cut(s) 177, 202, 316, 1105, 1252, 1297, 1366, 1779, 1798
BmrFI CCNGG 4 cut(s) 197, 503, 651, 1572
BmsI GCATC 2 cut(s) 64, 558
BpiI GAAGAC 2 cut(s) 250, 1722
BplI GAGNNNNNCTC 2 cut(s) 751, 783
Bpu10I CCTNAGC 1 cut(s) 1086
Bpu14I TTCGAA 1 cut(s) 1272
BpuMI CCSGG 1 cut(s) 503
BsaBI GATNNNNATC 1 cut(s) 1894
BsaJI CCNNGG 7 cut(s) 196, 310, 501, 655, 875, 1360, 1506
BsaWI WCCGGW 1 cut(s) 581
BsaXI ACNNNNNCTCC 6 cut(s) 96, 126, 212, 242, 1385, 1415
Bsc4I CCNNNNNNNGG 6 cut(s) 232, 324, 656, 1217, 1438, 1673
Bse118I RCCGGY 1 cut(s) 1298
Bse1I ACTGG 4 cut(s) 226, 681, 700, 1667
Bse21I CCTNAGG 1 cut(s) 1742
Bse3DI GCAATG 2 cut(s) 1452, 1661
Bse8I GATNNNNATC 1 cut(s) 1894
BseBI CCWGG 3 cut(s) 197, 651, 1572
BseDI CCNNGG 7 cut(s) 196, 310, 501, 655, 875, 1360, 1506
BseGI GGATG 5 cut(s) 447, 1174, 1207, 1320, 1711
BseJI GATNNNNATC 1 cut(s) 1894
BseLI CCNNNNNNNGG 6 cut(s) 232, 324, 656, 1217, 1438, 1673
BseMI GCAATG 2 cut(s) 1452, 1661
BseMII CTCAG 5 cut(s) 746, 1100, 1130, 1191, 1806
BseNI ACTGG 4 cut(s) 226, 681, 700, 1667
BseRI GAGGAG 2 cut(s) 1038, 1390
BseSI GKGCMC 3 cut(s) 502, 1281, 1800
BseX3I CGGCCG 1 cut(s) 504
BseXI GCAGC 2 cut(s) 729, 1367
BsgI GTGCAG 2 cut(s) 1328, 1884
Bsh1285I CGRYCG 1 cut(s) 507
BshFI GGCC 7 cut(s) 309, 328, 506, 649, 654, 1084, 1798
BshNI GGYRCC 2 cut(s) 200, 1103
BsiEI CGRYCG 1 cut(s) 507
BsiHKAI GWGCWC 1 cut(s) 1579
BsiSI CCGG 3 cut(s) 503, 582, 1299
BslFI GGGAC 4 cut(s) 189, 310, 747, 1300
BslI CCNNNNNNNGG 6 cut(s) 232, 324, 656, 1217, 1438, 1673
BsmAI GTCTC 1 cut(s) 1220
BsmBI CGTCTC 1 cut(s) 1220
BsmFI GGGAC 4 cut(s) 189, 310, 747, 1300
BsmI GAATGC 1 cut(s) 1615
BsnI GGCC 7 cut(s) 309, 328, 506, 649, 654, 1084, 1798
Bsp119I TTCGAA 1 cut(s) 1272
Bsp120I GGGCCC 1 cut(s) 1796
Bsp1286I GDGCHC 4 cut(s) 502, 1281, 1579, 1800
Bsp19I CCATGG 1 cut(s) 655
BspACI CCGC 1 cut(s) 645
BspANI GGCC 7 cut(s) 309, 328, 506, 649, 654, 1084, 1798
BspCNI CTCAG 5 cut(s) 745, 1099, 1131, 1190, 1807
BspLI GGNNCC 9 cut(s) 177, 202, 316, 1105, 1252, 1297, 1366, 1779, 1798
BspMAI CTGCAG 2 cut(s) 1324, 1357
BspMI ACCTGC 3 cut(s) 452, 1313, 1664
BspPI GGATC 6 cut(s) 187, 260, 1145, 1484, 1705, 1903
BspT104I TTCGAA 1 cut(s) 1272
BspT107I GGYRCC 2 cut(s) 200, 1103
BsrDI GCAATG 2 cut(s) 1452, 1661
BsrFI RCCGGY 1 cut(s) 1298
BsrI ACTGG 4 cut(s) 226, 681, 700, 1667
BssAI RCCGGY 1 cut(s) 1298
BssECI CCNNGG 7 cut(s) 196, 310, 501, 655, 875, 1360, 1506
BssNAI GTATAC 1 cut(s) 1621
BssT1I CCWWGG 4 cut(s) 310, 655, 1360, 1506
Bst1107I GTATAC 1 cut(s) 1621
Bst2UI CCWGG 3 cut(s) 197, 651, 1572
Bst4CI ACNGT 6 cut(s) 341, 357, 781, 1231, 1383, 1856
Bst6I CTCTTC 3 cut(s) 325, 752, 1815
BstAPI GCANNNNNTGC 1 cut(s) 371
BstBI TTCGAA 1 cut(s) 1272
BstC8I GCNNGC 5 cut(s) 91, 372, 647, 1300, 1353
BstDEI CTNAG 8 cut(s) 277, 732, 1086, 1139, 1177, 1742, 1815, 1904
BstDSI CCRYGG 2 cut(s) 655, 875
BstEII GGTNACC 2 cut(s) 1231, 1676
BstF5I GGATG 5 cut(s) 447, 1174, 1207, 1320, 1711
BstHHI GCGC 1 cut(s) 857
BstMAI GTCTC 1 cut(s) 1220
BstMCI CGRYCG 1 cut(s) 507
BstMWI GCNNNNNNNGC 5 cut(s) 371, 651, 1502, 1786, 1795
BstNI CCWGG 3 cut(s) 197, 651, 1572
BstNSI RCATGY 2 cut(s) 1243, 1729
BstPI GGTNACC 2 cut(s) 1231, 1676
BstSCI CCNGG 4 cut(s) 195, 501, 649, 1570
BstSFI CTRYAG 4 cut(s) 868, 1320, 1353, 1379
BstSLI GKGCMC 3 cut(s) 502, 1281, 1800
BstV1I GCAGC 2 cut(s) 729, 1367
BstV2I GAAGAC 2 cut(s) 250, 1722
BstX2I RGATCY 4 cut(s) 192, 1697, 1889, 1895
BstXI CCANNNNNNTGG 4 cut(s) 29, 101, 1552, 1605
BstYI RGATCY 4 cut(s) 192, 1697, 1889, 1895
BstZ17I GTATAC 1 cut(s) 1621
BstZI CGGCCG 1 cut(s) 504
Bsu36I CCTNAGG 1 cut(s) 1742
BsuRI GGCC 7 cut(s) 309, 328, 506, 649, 654, 1084, 1798
BtgI CCRYGG 2 cut(s) 655, 875
BtgZI GCGATG 1 cut(s) 1317
BtsCI GGATG 5 cut(s) 447, 1174, 1207, 1320, 1711
BtsI GCAGTG 3 cut(s) 365, 640, 1316
BtsIMutI CAGTG 6 cut(s) 362, 365, 640, 1316, 1674, 1812
BveI ACCTGC 3 cut(s) 452, 1313, 1664
Cac8I GCNNGC 5 cut(s) 91, 372, 647, 1300, 1353
CaiI CAGNNNCTG 1 cut(s) 1184
CfoI GCGC 1 cut(s) 857
Cfr10I RCCGGY 1 cut(s) 1298
Cfr13I GGNCC 5 cut(s) 176, 327, 647, 1796, 1797
CseI GACGC 1 cut(s) 363
Csp6I GTAC 8 cut(s) 201, 223, 229, 729, 913, 930, 1429, 1549
CspCI CAANNNNNGTGG 2 cut(s) 88, 123
CviAII CATG 9 cut(s) 78, 656, 1091, 1240, 1262, 1546, 1605, 1719, 1726
CviQI GTAC 8 cut(s) 201, 223, 229, 729, 913, 930, 1429, 1549
DdeI CTNAG 8 cut(s) 277, 732, 1086, 1139, 1177, 1742, 1815, 1904
DraI TTTAAA 1 cut(s) 1045
DriI GACNNNNNGTC 1 cut(s) 759
EaeI YGGCCR 3 cut(s) 307, 504, 652
EagI CGGCCG 1 cut(s) 504
Eam1104I CTCTTC 3 cut(s) 325, 752, 1815
Eam1105I GACNNNNNGTC 1 cut(s) 759
EarI CTCTTC 3 cut(s) 325, 752, 1815
Ecl136II GAGCTC 1 cut(s) 1577
EclXI CGGCCG 1 cut(s) 504
Eco130I CCWWGG 4 cut(s) 310, 655, 1360, 1506
Eco147I AGGCCT 1 cut(s) 1084
Eco24I GRGCYC 2 cut(s) 1579, 1800
Eco32I GATATC 1 cut(s) 1006
Eco47I GGWCC 1 cut(s) 176
Eco52I CGGCCG 1 cut(s) 504
Eco53kI GAGCTC 1 cut(s) 1577
Eco57I CTGAAG 1 cut(s) 1568
Eco81I CCTNAGG 1 cut(s) 1742
Eco91I GGTNACC 2 cut(s) 1231, 1676
EcoICRI GAGCTC 1 cut(s) 1577
EcoO109I RGGNCCY 2 cut(s) 1796, 1797
EcoO65I GGTNACC 2 cut(s) 1231, 1676
EcoRII CCWGG 3 cut(s) 195, 649, 1570
EcoRV GATATC 1 cut(s) 1006
EcoT14I CCWWGG 4 cut(s) 310, 655, 1360, 1506
EcoT22I ATGCAT 2 cut(s) 79, 1615
EcoT38I GRGCYC 2 cut(s) 1579, 1800
ErhI CCWWGG 4 cut(s) 310, 655, 1360, 1506
Esp3I CGTCTC 1 cut(s) 1220
FaeI CATG 9 cut(s) 81, 659, 1094, 1243, 1265, 1549, 1608, 1722, 1729
FalI AAGNNNNNCTT 2 cut(s) 1020, 1052
FaqI GGGAC 4 cut(s) 189, 310, 747, 1300
FatI CATG 9 cut(s) 77, 655, 1090, 1239, 1261, 1545, 1604, 1718, 1725
FauI CCCGC 1 cut(s) 638
FbaI TGATCA 3 cut(s) 841, 1204, 1828
FblI GTMKAC 2 cut(s) 1378, 1620
Fnu4HI GCNGC 2 cut(s) 718, 1356
FokI GGATG 5 cut(s) 434, 1181, 1194, 1327, 1718
FriOI GRGCYC 2 cut(s) 1579, 1800
Fsp4HI GCNGC 2 cut(s) 718, 1356
FspBI CTAG 3 cut(s) 858, 1080, 1793
GlaI GCGC 1 cut(s) 856
GluI GCNGC 2 cut(s) 718, 1356
HaeIII GGCC 7 cut(s) 309, 328, 506, 649, 654, 1084, 1798
HapII CCGG 3 cut(s) 503, 582, 1299
HgaI GACGC 1 cut(s) 363
HhaI GCGC 1 cut(s) 857
Hin1II CATG 9 cut(s) 81, 659, 1094, 1243, 1265, 1549, 1608, 1722, 1729
Hin6I GCGC 1 cut(s) 855
HinP1I GCGC 1 cut(s) 855
HincII GTYRAC 1 cut(s) 1766
HindII GTYRAC 1 cut(s) 1766
HindIII AAGCTT 1 cut(s) 87
HinfI GANTC 8 cut(s) 82, 528, 566, 611, 747, 760, 892, 1197
HpaII CCGG 3 cut(s) 503, 582, 1299
HphI GGTGA 6 cut(s) 154, 1075, 1243, 1512, 1571, 1670
Hpy166II GTNNAC 8 cut(s) 19, 145, 640, 875, 1339, 1379, 1621, 1766
Hpy188I TCNGA 5 cut(s) 263, 735, 889, 897, 1345
Hpy188III TCNNGA 4 cut(s) 608, 751, 1166, 1893
Hpy8I GTNNAC 8 cut(s) 19, 145, 640, 875, 1339, 1379, 1621, 1766
HpyAV CCTTC 8 cut(s) 155, 614, 1043, 1088, 1268, 1592, 1694, 1867
HpyCH4III ACNGT 6 cut(s) 341, 357, 781, 1231, 1383, 1856
HpyCH4IV ACGT 5 cut(s) 299, 627, 636, 705, 1623
HpyF10VI GCNNNNNNNGC 5 cut(s) 371, 651, 1502, 1786, 1795
HpyF3I CTNAG 8 cut(s) 277, 732, 1086, 1139, 1177, 1742, 1815, 1904
HpySE526I ACGT 5 cut(s) 299, 627, 636, 705, 1623
Hsp92II CATG 9 cut(s) 81, 659, 1094, 1243, 1265, 1549, 1608, 1722, 1729
HspAI GCGC 1 cut(s) 855
KpnI GGTACC 1 cut(s) 204
KroI GCCGGC 1 cut(s) 1298
KroNI GCCGGC 1 cut(s) 1300
Ksp22I TGATCA 3 cut(s) 841, 1204, 1828
LmnI GCTCC 6 cut(s) 314, 1192, 1250, 1295, 1574, 1777
Lsp1109I GCAGC 2 cut(s) 729, 1367
LweI GCATC 2 cut(s) 64, 558
MaeI CTAG 3 cut(s) 858, 1080, 1793
MaeII ACGT 5 cut(s) 299, 627, 636, 705, 1623
MaeIII GTNAC 7 cut(s) 628, 683, 790, 1180, 1231, 1518, 1676
MboII GAAGA 8 cut(s) 250, 312, 769, 1128, 1277, 1679, 1722, 1832
MflI RGATCY 4 cut(s) 192, 1697, 1889, 1895
MhlI GDGCHC 4 cut(s) 502, 1281, 1579, 1800
MlsI TGGCCA 2 cut(s) 309, 654
MluCI AATT 5 cut(s) 282, 660, 712, 945, 1015
MluNI TGGCCA 2 cut(s) 309, 654
MlyI GAGTC 1 cut(s) 769
MmeI TCCRAC 2 cut(s) 1692, 1738
Mox20I TGGCCA 2 cut(s) 309, 654
Mph1103I ATGCAT 2 cut(s) 79, 1615
MroNI GCCGGC 1 cut(s) 1298
MroXI GAANNNNTTC 2 cut(s) 8, 676
MscI TGGCCA 2 cut(s) 309, 654
MseI TTAA 4 cut(s) 468, 489, 624, 1044
MslI CAYNNNNRTG 1 cut(s) 809
Msp20I TGGCCA 2 cut(s) 309, 654
MspI CCGG 3 cut(s) 503, 582, 1299
MspR9I CCNGG 4 cut(s) 197, 503, 651, 1572
Mva1269I GAATGC 1 cut(s) 1615
MvaI CCWGG 3 cut(s) 197, 651, 1572
MwoI GCNNNNNNNGC 5 cut(s) 371, 651, 1502, 1786, 1795
NaeI GCCGGC 1 cut(s) 1300
NciI CCSGG 1 cut(s) 503
NcoI CCATGG 1 cut(s) 655
NgoMIV GCCGGC 1 cut(s) 1298
NlaIII CATG 9 cut(s) 81, 659, 1094, 1243, 1265, 1549, 1608, 1722, 1729
NlaIV GGNNCC 9 cut(s) 177, 202, 316, 1105, 1252, 1297, 1366, 1779, 1798
NmuCI GTSAC 3 cut(s) 1231, 1518, 1676
NsiI ATGCAT 2 cut(s) 79, 1615
NspI RCATGY 2 cut(s) 1243, 1729
NspV TTCGAA 1 cut(s) 1272
PceI AGGCCT 1 cut(s) 1084
PciI ACATGT 2 cut(s) 1239, 1725
PcsI WCGNNNNNNNCGW 1 cut(s) 633
PctI GAATGC 1 cut(s) 1615
PdiI GCCGGC 1 cut(s) 1300
PdmI GAANNNNTTC 2 cut(s) 8, 676
PfeI GAWTC 7 cut(s) 82, 528, 566, 611, 747, 892, 1197
PflFI GACNNNGTC 1 cut(s) 818
PflMI CCANNNNNTGG 1 cut(s) 1438
PkrI GCNGC 2 cut(s) 719, 1357
PleI GAGTC 1 cut(s) 768
PpsI GAGTC 1 cut(s) 768
PscI ACATGT 2 cut(s) 1239, 1725
Psp124BI GAGCTC 1 cut(s) 1579
Psp1406I AACGTT 2 cut(s) 627, 636
Psp6I CCWGG 3 cut(s) 195, 649, 1570
PspEI GGTNACC 2 cut(s) 1231, 1676
PspGI CCWGG 3 cut(s) 195, 649, 1570
PspN4I GGNNCC 9 cut(s) 177, 202, 316, 1105, 1252, 1297, 1366, 1779, 1798
PspOMI GGGCCC 1 cut(s) 1796
PspPI GGNCC 5 cut(s) 176, 327, 647, 1796, 1797
PstI CTGCAG 2 cut(s) 1324, 1357
PstNI CAGNNNCTG 1 cut(s) 1184
PsuI RGATCY 4 cut(s) 192, 1697, 1889, 1895
PsyI GACNNNGTC 1 cut(s) 818
RsaI GTAC 8 cut(s) 202, 224, 230, 730, 914, 931, 1430, 1550
RsaNI GTAC 8 cut(s) 201, 223, 229, 729, 913, 930, 1429, 1549
RseI CAYNNNNRTG 1 cut(s) 809
SacI GAGCTC 1 cut(s) 1579
SaqAI TTAA 4 cut(s) 468, 489, 624, 1044
SatI GCNGC 2 cut(s) 718, 1356
Sau96I GGNCC 5 cut(s) 176, 327, 647, 1796, 1797
ScaI AGTACT 1 cut(s) 230
SchI GAGTC 1 cut(s) 769
ScrFI CCNGG 4 cut(s) 197, 503, 651, 1572
SduI GDGCHC 4 cut(s) 502, 1281, 1579, 1800
SfaNI GCATC 2 cut(s) 64, 558
SfcI CTRYAG 4 cut(s) 868, 1320, 1353, 1379
SfuI TTCGAA 1 cut(s) 1272
SinI GGWCC 1 cut(s) 176
SmiMI CAYNNNNRTG 1 cut(s) 809
Sse9I AATT 5 cut(s) 282, 660, 712, 945, 1015
SseBI AGGCCT 1 cut(s) 1084
SsiI CCGC 1 cut(s) 645
SspI AATATT 1 cut(s) 851
SspMI CTAG 3 cut(s) 858, 1080, 1793
SstI GAGCTC 1 cut(s) 1579
StuI AGGCCT 1 cut(s) 1084
StyD4I CCNGG 4 cut(s) 195, 501, 649, 1570
StyI CCWWGG 4 cut(s) 310, 655, 1360, 1506
TaaI ACNGT 6 cut(s) 341, 357, 781, 1231, 1383, 1856
TaiI ACGT 5 cut(s) 302, 630, 639, 708, 1626
TaqI TCGA 8 cut(s) 303, 387, 411, 993, 1008, 1054, 1272, 1479
TaqII GACCGA 1 cut(s) 193
TasI AATT 5 cut(s) 282, 660, 712, 945, 1015
TatI WGTACW 3 cut(s) 228, 912, 1548
TfiI GAWTC 7 cut(s) 82, 528, 566, 611, 747, 892, 1197
Tru1I TTAA 4 cut(s) 468, 489, 624, 1044
Tru9I TTAA 4 cut(s) 468, 489, 624, 1044
TscAI CASTG 6 cut(s) 362, 372, 647, 1316, 1674, 1819
TseFI GTSAC 3 cut(s) 1231, 1518, 1676
TseI GCWGC 2 cut(s) 717, 1355
Tsp45I GTSAC 3 cut(s) 1231, 1518, 1676
TspDTI ATGAA 4 cut(s) 17, 1107, 1278, 1823
TspGWI ACGGA 1 cut(s) 892
TspRI CASTG 6 cut(s) 362, 372, 647, 1316, 1674, 1819
Tth111I GACNNNGTC 1 cut(s) 818
Van91I CCANNNNNTGG 1 cut(s) 1438
VpaK11BI GGWCC 1 cut(s) 176
XceI RCATGY 2 cut(s) 1243, 1729
XcmI CCANNNNNNNNNTGG 1 cut(s) 233
XmiI GTMKAC 2 cut(s) 1378, 1620
XmnI GAANNNNTTC 2 cut(s) 8, 676
XspI CTAG 3 cut(s) 858, 1080, 1793
ZrmI AGTACT 1 cut(s) 230
Zsp2I ATGCAT 2 cut(s) 79, 1615
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.