Rh5CG172700

DREPP plasma membrane polypeptide

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0003896
Physical Location & Seq
Forward (+)
16325622 .. 16327678
2057 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG172700.1

Sequence Viewer

Length: 729 bp
ATGATCAACTTTTCATGTATATATAAGATTTTGCCTTTGTTTGGATGGTTCTCAGGGGTATTCGAGTTTGAGAAGAATTCAAAGATGGGTTACTGGAAAACAAAGGTGCTTCCCACAATCAAGAAGGTGTTTGAGAACAAGGGCAGTATCAAAAAGGCTGAAGCTGCTGAAGCTTGCAAGACCTTTGATGAGTCGAAGGAGAGTTATGCCAAGGAGTTTGAAGAGAAGAAGGCTGAGTATCAAGTAAAAGTAGTTGAATTATATGAAGCTTCCTCTGCTGAAATCAAGACTTTGATTAAGGAGCGGAAGCTGGCTGCGTTGAAGAAGTACTCTGCTGCAGTCCACAAGTTCCTTGAAGAGCTTGCCAAGATAGACTTTCCAGGATCGAAACCAGTCTCAGAAGCATCATCAAAGTATGGACCGGCCTACGTCTCAGGTCCAGTCTTCTTTGTGTTTGAGAAGGTCTCAACGTATATTGTGACAGAAGAGAAGGTAGCGGAGCCAACGCCACCAGAACCAACACCAGCTAAAGTCGAAGAGGAAACAAGTTCCAGAAAAGAAAAGGAGATAGTGATCGAAGAAGAGAAGAAGGAAGAGGTTGTAGAGGTGAAGAAAGAAGAAGAGGTGGTGGTGGTGGAGGAGAAGAAGGAAGAGCCTGAAGCATCATGTGGTGAGGAAAAGCCTAAGGAGGAGGAAGCTGCTCCTGCTGCTGAACCAGCAAAGCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000226 GO:0001101 GO:0001558 GO:0002237 GO:0003674 GO:0005488 GO:0005507 GO:0005509 GO:0005515 GO:0005516 GO:0005543 GO:0005546 GO:0005547 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005856 GO:0005874 GO:0005881 GO:0005886 GO:0005911 GO:0006464 GO:0006497 GO:0006498 GO:0006499 GO:0006807 GO:0006810 GO:0006950 GO:0006952 GO:0006970 GO:0006996 GO:0007010 GO:0007017 GO:0007154 GO:0008017 GO:0008092 GO:0008150 GO:0008152 GO:0008289 GO:0009058 GO:0009059 GO:0009266 GO:0009267 GO:0009409 GO:0009414 GO:0009415 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009735 GO:0009743 GO:0009987 GO:0009991 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010118 GO:0010350 GO:0010555 GO:0010638 GO:0010639 GO:0015630 GO:0015631 GO:0016020 GO:0016032 GO:0016043 GO:0018377 GO:0019058 GO:0019538 GO:0022603 GO:0022604 GO:0030054 GO:0030308 GO:0030865 GO:0031110 GO:0031111 GO:0031112 GO:0031113 GO:0031114 GO:0031115 GO:0031117 GO:0031122 GO:0031224 GO:0031225 GO:0031226 GO:0031333 GO:0031365 GO:0031667 GO:0031668 GO:0031669 GO:0032026 GO:0032271 GO:0032272 GO:0032886 GO:0033043 GO:0033554 GO:0034645 GO:0035091 GO:0035864 GO:0035865 GO:0036211 GO:0040008 GO:0042157 GO:0042158 GO:0042221 GO:0042594 GO:0042742 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043243 GO:0043244 GO:0043254 GO:0043325 GO:0043412 GO:0043543 GO:0043622 GO:0044087 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044403 GO:0044419 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0044766 GO:0045926 GO:0046658 GO:0046688 GO:0046794 GO:0046872 GO:0046914 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048638 GO:0048640 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051128 GO:0051129 GO:0051130 GO:0051179 GO:0051234 GO:0051493 GO:0051494 GO:0051495 GO:0051510 GO:0051511 GO:0051592 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070507 GO:0070887 GO:0071214 GO:0071216 GO:0071219 GO:0071241 GO:0071248 GO:0071280 GO:0071281 GO:0071286 GO:0071310 GO:0071322 GO:0071325 GO:0071470 GO:0071472 GO:0071496 GO:0071704 GO:0071840 GO:0071944 GO:0072708 GO:0072709 GO:0075733 GO:0080025 GO:0090332 GO:0097435 GO:0098542 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0104004 GO:1901564 GO:1901566 GO:1901576 GO:1901700 GO:1901701 GO:1901879 GO:1901881 GO:1901981 GO:1902579 GO:1902903 GO:1902904 GO:1902905 GO:1902936
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DREPP

Protein Analysis

242

Amino Acids

27.36

Weight (kDa)

5.15

Isoelectric Point (pI)

53.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DREPP PF05558 29 - 236 1.4e-74 DREPP plasma membrane polypeptide
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 304
AciI CCGC 2 cut(s) 304, 497
AclWI GGATC 1 cut(s) 391
AcsI RAATTY 1 cut(s) 76
AcuI CTGAAG 3 cut(s) 180, 189, 678
AfaI GTAC 1 cut(s) 329
AfiI CCNNNNNNNGG 1 cut(s) 41
AgsI TTSAA 5 cut(s) 81, 221, 257, 322, 356
AjnI CCWGG 1 cut(s) 379
AluBI AGCT 7 cut(s) 164, 173, 269, 310, 361, 527, 698
AluI AGCT 7 cut(s) 164, 173, 269, 310, 361, 527, 698
Alw26I GTCTC 3 cut(s) 400, 436, 469
AlwI GGATC 1 cut(s) 391
AoxI GGCC 1 cut(s) 423
ApeKI GCWGC 5 cut(s) 164, 314, 335, 698, 707
ApoI RAATTY 1 cut(s) 76
AspS9I GGNCC 2 cut(s) 419, 437
AsuHPI GGTGA 2 cut(s) 619, 683
AvaII GGWCC 2 cut(s) 419, 437
AxyI CCTNAGG 1 cut(s) 684
BbsI GAAGAC 1 cut(s) 436
BbvI GCAGC 5 cut(s) 151, 301, 322, 685, 694
BccI CCATC 2 cut(s) 39, 79
BciT130I CCWGG 1 cut(s) 381
BclI TGATCA 1 cut(s) 3
BcoDI GTCTC 3 cut(s) 400, 436, 469
BfmI CTRYAG 1 cut(s) 336
BisI GCNGC 5 cut(s) 165, 315, 336, 699, 708
BlsI GCNGC 5 cut(s) 166, 316, 337, 700, 709
BmcAI AGTACT 1 cut(s) 329
Bme1390I CCNGG 1 cut(s) 381
Bme18I GGWCC 2 cut(s) 419, 437
BmgT120I GGNCC 2 cut(s) 419, 437
BmiI GGNNCC 1 cut(s) 501
BmrFI CCNGG 1 cut(s) 381
BmsI GCATC 2 cut(s) 413, 671
BpiI GAAGAC 1 cut(s) 436
BplI GAGNNNNNCTC 2 cut(s) 449, 481
BsaBI GATNNNNATC 1 cut(s) 572
BsaI GGTCTC 1 cut(s) 469
BsaJI CCNNGG 1 cut(s) 210
Bsc4I CCNNNNNNNGG 1 cut(s) 41
Bse118I RCCGGY 1 cut(s) 421
Bse1I ACTGG 3 cut(s) 98, 392, 440
Bse21I CCTNAGG 1 cut(s) 684
Bse8I GATNNNNATC 1 cut(s) 572
BseBI CCWGG 1 cut(s) 381
BseDI CCNNGG 1 cut(s) 210
BseGI GGATG 1 cut(s) 50
BseJI GATNNNNATC 1 cut(s) 572
BseLI CCNNNNNNNGG 1 cut(s) 41
BseMII CTCAG 4 cut(s) 66, 225, 411, 447
BseNI ACTGG 3 cut(s) 98, 392, 440
BseRI GAGGAG 2 cut(s) 653, 704
BseXI GCAGC 5 cut(s) 151, 301, 322, 685, 694
BshFI GGCC 1 cut(s) 425
BsiSI CCGG 1 cut(s) 422
BslI CCNNNNNNNGG 1 cut(s) 41
BsmAI GTCTC 3 cut(s) 400, 436, 469
BsmBI CGTCTC 1 cut(s) 436
BsnI GGCC 1 cut(s) 425
Bso31I GGTCTC 1 cut(s) 469
Bsp143I GATC 3 cut(s) 3, 383, 573
BspACI CCGC 2 cut(s) 304, 497
BspANI GGCC 1 cut(s) 425
BspCNI CTCAG 4 cut(s) 65, 226, 410, 446
BspLI GGNNCC 1 cut(s) 501
BspMAI CTGCAG 1 cut(s) 340
BspPI GGATC 1 cut(s) 391
BspQI GCTCTTC 2 cut(s) 351, 645
BspTNI GGTCTC 1 cut(s) 469
BsrBI CCGCTC 1 cut(s) 304
BsrFI RCCGGY 1 cut(s) 421
BsrI ACTGG 3 cut(s) 98, 392, 440
BssAI RCCGGY 1 cut(s) 421
BssECI CCNNGG 1 cut(s) 210
BssMI GATC 3 cut(s) 3, 383, 573
BssT1I CCWWGG 1 cut(s) 210
Bst2UI CCWGG 1 cut(s) 381
Bst6I CTCTTC 8 cut(s) 216, 351, 480, 531, 576, 588, 615, 645
BstC8I GCNNGC 3 cut(s) 175, 312, 363
BstDEI CTNAG 5 cut(s) 52, 234, 397, 433, 684
BstF5I GGATG 1 cut(s) 50
BstKTI GATC 3 cut(s) 6, 386, 576
BstMAI GTCTC 3 cut(s) 400, 436, 469
BstMBI GATC 3 cut(s) 3, 383, 573
BstMWI GCNNNNNNNGC 6 cut(s) 164, 170, 275, 704, 707, 716
BstNI CCWGG 1 cut(s) 381
BstSCI CCNGG 1 cut(s) 379
BstSFI CTRYAG 1 cut(s) 336
BstV1I GCAGC 5 cut(s) 151, 301, 322, 685, 694
BstV2I GAAGAC 1 cut(s) 436
Bsu36I CCTNAGG 1 cut(s) 684
BsuRI GGCC 1 cut(s) 425
BtsCI GGATG 1 cut(s) 50
Cac8I GCNNGC 3 cut(s) 175, 312, 363
Cfr10I RCCGGY 1 cut(s) 421
Cfr13I GGNCC 2 cut(s) 419, 437
Csp6I GTAC 1 cut(s) 328
CviAII CATG 2 cut(s) 15, 666
CviQI GTAC 1 cut(s) 328
DdeI CTNAG 5 cut(s) 52, 234, 397, 433, 684
DpnI GATC 3 cut(s) 5, 385, 575
DpnII GATC 3 cut(s) 3, 383, 573
Eam1104I CTCTTC 8 cut(s) 216, 351, 480, 531, 576, 588, 615, 645
EarI CTCTTC 8 cut(s) 216, 351, 480, 531, 576, 588, 615, 645
Eco130I CCWWGG 1 cut(s) 210
Eco31I GGTCTC 1 cut(s) 469
Eco47I GGWCC 2 cut(s) 419, 437
Eco57I CTGAAG 3 cut(s) 180, 189, 678
Eco81I CCTNAGG 1 cut(s) 684
EcoRI GAATTC 1 cut(s) 76
EcoRII CCWGG 1 cut(s) 379
EcoT14I CCWWGG 1 cut(s) 210
ErhI CCWWGG 1 cut(s) 210
Esp3I CGTCTC 1 cut(s) 436
FaeI CATG 2 cut(s) 18, 669
FalI AAGNNNNNCTT 2 cut(s) 359, 391
FatI CATG 2 cut(s) 14, 665
FbaI TGATCA 1 cut(s) 3
Fnu4HI GCNGC 5 cut(s) 165, 315, 336, 699, 708
FokI GGATG 1 cut(s) 57
Fsp4HI GCNGC 5 cut(s) 165, 315, 336, 699, 708
GluI GCNGC 5 cut(s) 165, 315, 336, 699, 708
HaeIII GGCC 1 cut(s) 425
HapII CCGG 1 cut(s) 422
Hin1II CATG 2 cut(s) 18, 669
HindIII AAGCTT 2 cut(s) 171, 267
HinfI GANTC 1 cut(s) 191
HpaII CCGG 1 cut(s) 422
HphI GGTGA 2 cut(s) 619, 683
Hpy166II GTNNAC 1 cut(s) 343
Hpy188I TCNGA 1 cut(s) 400
Hpy188III TCNNGA 3 cut(s) 121, 286, 552
Hpy8I GTNNAC 1 cut(s) 343
HpyAV CCTTC 7 cut(s) 118, 190, 223, 454, 484, 583, 640
HpyCH4IV ACGT 2 cut(s) 429, 470
HpyCH4V TGCA 2 cut(s) 177, 338
HpyF10VI GCNNNNNNNGC 6 cut(s) 164, 170, 275, 704, 707, 716
HpyF3I CTNAG 5 cut(s) 52, 234, 397, 433, 684
HpySE526I ACGT 2 cut(s) 429, 470
Hsp92II CATG 2 cut(s) 18, 669
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 3 cut(s) 3, 383, 573
LguI GCTCTTC 2 cut(s) 351, 645
LmnI GCTCC 3 cut(s) 301, 499, 706
Lsp1109I GCAGC 5 cut(s) 151, 301, 322, 685, 694
LweI GCATC 2 cut(s) 413, 671
MaeII ACGT 2 cut(s) 429, 470
MaeIII GTNAC 2 cut(s) 89, 478
MalI GATC 3 cut(s) 5, 385, 575
MbiI CCGCTC 1 cut(s) 304
MboI GATC 3 cut(s) 3, 383, 573
MluCI AATT 2 cut(s) 76, 257
MlyI GAGTC 1 cut(s) 200
MnlI CCTC 9 cut(s) 283, 532, 589, 598, 616, 631, 667, 682, 685
MseI TTAA 1 cut(s) 297
MspI CCGG 1 cut(s) 422
MspR9I CCNGG 1 cut(s) 381
MvaI CCWGG 1 cut(s) 381
MwoI GCNNNNNNNGC 6 cut(s) 164, 170, 275, 704, 707, 716
NdeII GATC 3 cut(s) 3, 383, 573
NlaIII CATG 2 cut(s) 18, 669
NlaIV GGNNCC 1 cut(s) 501
NmuCI GTSAC 1 cut(s) 478
PciSI GCTCTTC 2 cut(s) 351, 645
PfoI TCCNGGA 1 cut(s) 379
PkrI GCNGC 5 cut(s) 166, 316, 337, 700, 709
PleI GAGTC 1 cut(s) 199
PpsI GAGTC 1 cut(s) 199
Psp6I CCWGG 1 cut(s) 379
PspGI CCWGG 1 cut(s) 379
PspN4I GGNNCC 1 cut(s) 501
PspPI GGNCC 2 cut(s) 419, 437
PstI CTGCAG 1 cut(s) 340
RsaI GTAC 1 cut(s) 329
RsaNI GTAC 1 cut(s) 328
SapI GCTCTTC 2 cut(s) 351, 645
SaqAI TTAA 1 cut(s) 297
SatI GCNGC 5 cut(s) 165, 315, 336, 699, 708
Sau3AI GATC 3 cut(s) 3, 383, 573
Sau96I GGNCC 2 cut(s) 419, 437
ScaI AGTACT 1 cut(s) 329
SchI GAGTC 1 cut(s) 200
ScrFI CCNGG 1 cut(s) 381
SfaNI GCATC 2 cut(s) 413, 671
SfcI CTRYAG 1 cut(s) 336
SinI GGWCC 2 cut(s) 419, 437
Sse9I AATT 2 cut(s) 76, 257
SsiI CCGC 2 cut(s) 304, 497
StyD4I CCNGG 1 cut(s) 379
StyI CCWWGG 1 cut(s) 210
TaiI ACGT 2 cut(s) 432, 473
TaqI TCGA 5 cut(s) 63, 194, 386, 534, 576
TasI AATT 2 cut(s) 76, 257
TatI WGTACW 1 cut(s) 327
Tru1I TTAA 1 cut(s) 297
Tru9I TTAA 1 cut(s) 297
TseFI GTSAC 1 cut(s) 478
TseI GCWGC 5 cut(s) 164, 314, 335, 698, 707
Tsp45I GTSAC 1 cut(s) 478
TspDTI ATGAA 1 cut(s) 279
VpaK11BI GGWCC 2 cut(s) 419, 437
XapI RAATTY 1 cut(s) 76
ZrmI AGTACT 1 cut(s) 329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.