Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0011243

Physical Location & Seq

Genomic Coordinates Reverse (-)

32508457 .. 32517396

Gene Structure 8940 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG295400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2328 bp

ATGGCTATGGGGTTCTCCTCCTTCCAGACCAGCCATTTGAGGCCTTGCCCTTCTTATTTCTCTTTATTACGGGCTTGTCCTCTGTCTTCTTCGTCTTCTAGGTCCCTATGGACTCCTTCAGTTTCAAGGCGAGTTTTGGATTGCAAGCCAGAGGTCTATGTTGGGCGCCTAAGGGGTGTCCAGGCTGCCAAATCATATAATACTTTGACCTCTGAAGGAAAATCCAACGACTCTAGATATGCCTGGAGAGCTGCCGTTACTCGCCTGAGGAAAGAAAAACAGGAAGTGGAAAGTTCTTACAGAAGTAAGACATACTCTGAAGGAAATATAAAAACGATTACCCCTGAAAAGGTTGATAACAGTAGCTATGAGATGGGGGAGGTAACTTTATACGAGACACATGGTGAAGGAAGTAATGTGGACAGAGTAAATGGTTATGCACACGATAGTCCAGATGTAGTAGCTTCTGTAGGAATTGACAATCCTAGTGTGGAAAAGGTGAATGGTTATGCACATGATGGTCCAAGACTGGGTGTGGCTACGCCACCCAGATCAGGGAAGGAAGTTAAGTCCAAGGGGCCATTATTGGGGAAGACCTCAAAGGTCAGGAAAGGGATTGATTCTGGACCTAGTAAAGTTGAAGCCGGTAATGTGATGAACAGGGACAAGTCCGATGTAAAATCTTCTGAATCTAAAGCTGCTACACCAGTACATAGTAAGGAAGATCTTCGCAAGACACTTAATAACATTTACGACAAAGTTCTCATTGTCAATAGTGTCTCTATTGCAAAGAAAGTCGTTAGGATGCTTAGAGGAGAATATAGGCACCTTGTCCATGCCTGTGACACAGAGGTGGCCGAGATAGATGTTAAGAAAGAAACACCTGTAGATCATGGACAGATAATATGCTTCAGTATATATTCTGGACCAGATGTGGATTTTGGAAATGGAAAGTCCTGCATCTGGGTGGATGTTCTTGATGGTGGCGGCAAGGAACTTCTACTTGAATTTGCTCCATTTTTTGAAGATCCCTCCATTAAAAAGGTTTGGCACAATTATAGCTTTGATAACCATGTAATTGAGAACTATGGATTTAAGGTTTCTGGCTTTCATGCCGACACCATGCACATGGCCCGCTTGTGGGATTCATCAAGGCGGTTAAAGGGTGGTTACTCTCTTGAAGCTCTAACACATGACCCAAAGGTCATGTCTGGGGCACCATCATGTGAGGAGAATGACTTGATTGGTAAGATATCAATGAAGACAATATTTGGCAGAAAGAAATTGAAAAAAGATGGTACCGATGGGAAAATAACAATCCTTGACCCAGTTGAAGTGCTACAAAGAGAGGAGAGAAAACCATGGATCTGTTATTCTGCGTTAGATGCAATAAGCACACTAAAGCTTTATGAGAGTATGAAAAACCAACTCTCCAATAGGCAGTGGGAAATTGATGGAAATCCAGCTCCTGGAACCATGTTTGATTTCTATGAAAAATACTGGCGACCATTTGGCGAGCTCTTAGTTCAGATGGAAACCGAGGGAATGCTGGTTGATCGAGGATATCTAGCTGAAATTGAGAAGTTGGCCAAATCAGAACAAGAGGTTGCTGTGAATAGATTTCGCAAGTGGGCTTCCAGCTTTTGCCCTGATGCTAAGTACATGAATGTGGGAAGTGATGTGCAACTACGCCAGCTTTTATTTGGTGGGACCGTGAACAGCAAGGACTCGAATCAGGCTCTTCCAAATGAGAGGACTTTTAGAGTTCCAAACACTGATAAAGTGATTGAAGAAGGCAAAAGTACAACTCCAAAATTTCGCAATATCACTCTGCACACAGTTGGTGTCAATCTGCCAACTGAGATTTACACAGCAACTGGTTGGCCTTCAGTTAGCGGAGATGCTTTGAAGATTTTAGCTGGCAAGATCTCTTCAGAGTATGATTTTATGGATCCCGCTCCTGATATGGAGTCTGTTGATGATGGAGATTCTTGTGAGACAGTGAGTGATGAATACTTGGGAAAAGAAGAGATTATCTCTGAAAATCTTGACAGGTCTGACTATGGAACAGCTTTGCAAGCATTCGAGTCAGAGGAGAAGGGGAAGGAAGCTTGCCACGCCATTGCTGCATTATGTCAAGTTTGCTCTATTGATTCGTTGATATCCAACTTCATCCTCCCTTTGCAGGGCAGTAATATAGCTGGCAAAAACAGACGAATTCATTGTTCACTAAATATCAACACAGAAACTGGGCGGTTATCTGCTAGGCGACCAAATTTGCAGGTTTGTTATTGGCTCCAACATTCTTGCTATCTTATAAATAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000002 GO:0003674 GO:0003824 GO:0003887 GO:0004518 GO:0004527 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006264 GO:0006725 GO:0006807 GO:0006996 GO:0007005 GO:0008150 GO:0008152 GO:0008409 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009657 GO:0009987 GO:0016043 GO:0016740 GO:0016772 GO:0016779 GO:0016787 GO:0016788 GO:0018130 GO:0019438 GO:0032042 GO:0033258 GO:0033259 GO:0034061 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0071897 GO:0090304 GO:0090305 GO:0140097 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03030 ko03410 ko03420 ko03440 map00230 map00240 map01100 map03030 map03410 map03420 map03440

Pfam Domains

Protein Families

DNA_pol_A DNA_pol_A_exo1

Protein Analysis

775

Amino Acids

86.38

Weight (kDa)

6.66

Isoelectric Point (pI)

43.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_pol_A_exo1	PF01612	315 - 477	4.2e-10	3'-5' exonuclease

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011243)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G50840 AT1G50840 AT3G20540 AT3G20540
fragaria_vesca	FvH4_3g22230
malus_domestica	MD11G1221900.v1.1
prunus_persica	Prupe.4G209500_v2.0.a1 Prupe.4G209500_v2.0.a1 Prupe.4G209500_v2.0.a1
pyrus_communis	pycom11g19570
rosa_chinensis	RchiOBHm_Chr5g0038301
rosa_laevigata	RLG00000033845
rosa_multiflora	Rmu_co8325491.1_g000001
rosa_roxburghii	Rroxscaffold_1G00042720
rosa_rugosa	Rorug05G0171900
rosa_samantha	Rh5AG259200 Rh5BG263000 Rh5CG295400 Rh5DG272000
rosa_wichuraiana	Rw5G024260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2318
AasI	GACNNNNNNGTC	1 cut(s)	1202
Acc36I	ACCTGC	1 cut(s)	2272
Acc65I	GGTACC	1 cut(s)	1298
AccB1I	GGYRCC	4 cut(s)	165, 825, 1216, 1298
AccB7I	CCANNNNNTGG	1 cut(s)	1469
AccBSI	CCGCTC	1 cut(s)	1958
AciI	CCGC	6 cut(s)	987, 1135, 1156, 1896, 1956, 2254
AclWI	GGATC	4 cut(s)	1022, 1373, 1946, 1959
AcoI	YGGCCR	2 cut(s)	855, 1587
AcsI	RAATTY	4 cut(s)	1007, 1814, 2217, 2275
AcuI	CTGAAG	6 cut(s)	102, 234, 339, 895, 1872, 1917
AcyI	GRCGYC	1 cut(s)	166
AdeI	CACNNNGTG	1 cut(s)	404
AfaI	GTAC	4 cut(s)	711, 1300, 1661, 1804
AgsI	TTSAA	9 cut(s)	126, 641, 1007, 1025, 1181, 1288, 1334, 1790, 1909
AjnI	CCWGG	3 cut(s)	180, 242, 1468
AleI	CACNNNNGTG	1 cut(s)	851
Alw21I	GWGCWC	1 cut(s)	1521
Alw26I	GTCTC	3 cut(s)	389, 784, 1991
AlwI	GGATC	4 cut(s)	1022, 1373, 1946, 1959
AlwNI	CAGNNNCTG	3 cut(s)	1469, 1877, 2249
AoxI	GGCC	6 cut(s)	41, 578, 855, 1131, 1587, 1883
ApeKI	GCWGC	4 cut(s)	185, 251, 698, 2126
ApoI	RAATTY	4 cut(s)	1007, 1814, 2217, 2275
ArsI	GACNNNNNNTTYG	4 cut(s)	19, 51, 1193, 1225
Asp700I	GAANNNNTTC	1 cut(s)	726
Asp718I	GGTACC	1 cut(s)	1298
AspLEI	GCGC	1 cut(s)	168
AspS9I	GGNCC	7 cut(s)	102, 521, 578, 626, 926, 1132, 1710
AsuHPI	GGTGA	2 cut(s)	416, 511
AvaII	GGWCC	5 cut(s)	102, 521, 626, 926, 1710
AxyI	CCTNAGG	2 cut(s)	170, 266
BaeGI	GKGCMC	1 cut(s)	1219
BalI	TGGCCA	1 cut(s)	1589
BamHI	GGATCC	1 cut(s)	1951
BanI	GGYRCC	4 cut(s)	165, 825, 1216, 1298
BanII	GRGCYC	1 cut(s)	1521
BbsI	GAAGAC	4 cut(s)	78, 87, 599, 1268
Bbv12I	GWGCWC	1 cut(s)	1521
BbvI	GCAGC	4 cut(s)	172, 238, 685, 2113
BccI	CCATC	9 cut(s)	367, 512, 974, 1228, 1289, 1298, 1448, 1525, 1976
BceAI	ACGGC	1 cut(s)	239
BciT130I	CCWGG	3 cut(s)	182, 244, 1470
BcoDI	GTCTC	3 cut(s)	389, 784, 1991
BfaI	CTAG	6 cut(s)	99, 234, 486, 630, 1568, 2265
BfmI	CTRYAG	2 cut(s)	468, 885
BfoI	RGCGCY	1 cut(s)	169
BfuAI	ACCTGC	1 cut(s)	2272
BglII	AGATCT	2 cut(s)	724, 1926
BisI	GCNGC	5 cut(s)	186, 252, 699, 988, 2127
BlsI	GCNGC	5 cut(s)	187, 253, 700, 989, 2128
Bme1390I	CCNGG	3 cut(s)	182, 244, 1470
Bme18I	GGWCC	5 cut(s)	102, 521, 626, 926, 1710
BmgT120I	GGNCC	7 cut(s)	102, 521, 578, 626, 926, 1132, 1710
BmrFI	CCNGG	3 cut(s)	182, 244, 1470
BmrI	ACTGGG	3 cut(s)	539, 1322, 2259
BmsI	GCATC	5 cut(s)	795, 969, 1375, 1642, 1891
BmuI	ACTGGG	3 cut(s)	539, 1322, 2259
BpiI	GAAGAC	4 cut(s)	78, 87, 599, 1268
BplI	GAGNNNNNCTC	2 cut(s)	2021, 2053
BpmI	CTGGAG	1 cut(s)	265
BsaBI	GATNNNNATC	1 cut(s)	1458
BsaHI	GRCGYC	1 cut(s)	166
BsaJI	CCNNGG	3 cut(s)	573, 1361, 1539
BsaXI	ACNNNNNCTCC	2 cut(s)	1415, 1445
Bse118I	RCCGGY	1 cut(s)	644
Bse1I	ACTGG	6 cut(s)	534, 707, 1328, 1505, 1882, 2254
Bse21I	CCTNAGG	2 cut(s)	170, 266
Bse3DI	GCAATG	1 cut(s)	2121
Bse8I	GATNNNNATC	1 cut(s)	1458
BseBI	CCWGG	3 cut(s)	182, 244, 1470
BseDI	CCNNGG	3 cut(s)	573, 1361, 1539
BseGI	GGATG	3 cut(s)	810, 976, 2172
BseJI	GATNNNNATC	1 cut(s)	1458
BseMI	GCAATG	1 cut(s)	2121
BseMII	CTCAG	2 cut(s)	257, 1851
BseNI	ACTGG	6 cut(s)	534, 707, 1328, 1505, 1882, 2254
BseRI	GAGGAG	5 cut(s)	7, 828, 1244, 1364, 2108
BseSI	GKGCMC	1 cut(s)	1219
BseXI	GCAGC	4 cut(s)	172, 238, 685, 2113
BsgI	GTGCAG	1 cut(s)	1817
BshFI	GGCC	6 cut(s)	43, 580, 857, 1133, 1589, 1885
BshNI	GGYRCC	4 cut(s)	165, 825, 1216, 1298
BsiHKAI	GWGCWC	1 cut(s)	1521
BsiSI	CCGG	1 cut(s)	645
BslFI	GGGAC	3 cut(s)	88, 677, 1723
BsmAI	GTCTC	3 cut(s)	389, 784, 1991
BsmFI	GGGAC	3 cut(s)	88, 677, 1723
BsmI	GAATGC	2 cut(s)	1551, 2081
BsnI	GGCC	6 cut(s)	43, 580, 857, 1133, 1589, 1885
Bsp1286I	GDGCHC	2 cut(s)	1219, 1521
Bsp143I	GATC	8 cut(s)	551, 724, 889, 1027, 1365, 1555, 1926, 1951
Bsp19I	CCATGG	1 cut(s)	1361
BspACI	CCGC	6 cut(s)	987, 1135, 1156, 1896, 1956, 2254
BspANI	GGCC	6 cut(s)	43, 580, 857, 1133, 1589, 1885
BspCNI	CTCAG	2 cut(s)	258, 1852
BspMI	ACCTGC	1 cut(s)	2272
BspPI	GGATC	4 cut(s)	1022, 1373, 1946, 1959
BspQI	GCTCTTC	1 cut(s)	1746
BspT107I	GGYRCC	4 cut(s)	165, 825, 1216, 1298
BsrBI	CCGCTC	1 cut(s)	1958
BsrDI	GCAATG	1 cut(s)	2121
BsrFI	RCCGGY	1 cut(s)	644
BsrI	ACTGG	6 cut(s)	534, 707, 1328, 1505, 1882, 2254
BssAI	RCCGGY	1 cut(s)	644
BssECI	CCNNGG	3 cut(s)	573, 1361, 1539
BssMI	GATC	8 cut(s)	551, 724, 889, 1027, 1365, 1555, 1926, 1951
BssNI	GRCGYC	1 cut(s)	166
BssT1I	CCWWGG	2 cut(s)	573, 1361
Bst2UI	CCWGG	3 cut(s)	182, 244, 1470
Bst4CI	ACNGT	4 cut(s)	362, 1714, 1840, 2002
Bst6I	CTCTTC	3 cut(s)	1746, 1936, 2022
BstACI	GRCGYC	1 cut(s)	166
BstC8I	GCNNGC	8 cut(s)	146, 1135, 1517, 1694, 1921, 2079, 2113, 2203
BstDEI	CTNAG	6 cut(s)	170, 266, 809, 1522, 1656, 1860
BstDSI	CCRYGG	1 cut(s)	1361
BstF5I	GGATG	3 cut(s)	810, 976, 2172
BstH2I	RGCGCY	1 cut(s)	169
BstHHI	GCGC	1 cut(s)	168
BstKTI	GATC	8 cut(s)	554, 727, 892, 1030, 1368, 1558, 1929, 1954
BstMAI	GTCTC	3 cut(s)	389, 784, 1991
BstMBI	GATC	8 cut(s)	551, 724, 889, 1027, 1365, 1555, 1926, 1951
BstMWI	GCNNNNNNNGC	5 cut(s)	248, 1385, 2078, 2117, 2126
BstNI	CCWGG	3 cut(s)	182, 244, 1470
BstSCI	CCNGG	3 cut(s)	180, 242, 1468
BstSFI	CTRYAG	2 cut(s)	468, 885
BstSLI	GKGCMC	1 cut(s)	1219
BstV1I	GCAGC	4 cut(s)	172, 238, 685, 2113
BstV2I	GAAGAC	4 cut(s)	78, 87, 599, 1268
BstX2I	RGATCY	5 cut(s)	724, 1027, 1365, 1926, 1951
BstXI	CCANNNNNNTGG	1 cut(s)	1129
BstYI	RGATCY	5 cut(s)	724, 1027, 1365, 1926, 1951
Bsu36I	CCTNAGG	2 cut(s)	170, 266
BsuRI	GGCC	6 cut(s)	43, 580, 857, 1133, 1589, 1885
BtgI	CCRYGG	1 cut(s)	1361
BtsCI	GGATG	3 cut(s)	810, 976, 2172
BtsI	GCAGTG	1 cut(s)	1448
BtsIMutI	CAGTG	3 cut(s)	1448, 1773, 2007
BveI	ACCTGC	1 cut(s)	2272
Cac8I	GCNNGC	8 cut(s)	146, 1135, 1517, 1694, 1921, 2079, 2113, 2203
CaiI	CAGNNNCTG	3 cut(s)	1469, 1877, 2249
CfoI	GCGC	1 cut(s)	168
Cfr10I	RCCGGY	1 cut(s)	644
Cfr13I	GGNCC	7 cut(s)	102, 521, 578, 626, 926, 1132, 1710
Csp6I	GTAC	4 cut(s)	710, 1299, 1660, 1803
CviQI	GTAC	4 cut(s)	710, 1299, 1660, 1803
DdeI	CTNAG	6 cut(s)	170, 266, 809, 1522, 1656, 1860
DinI	GGCGCC	1 cut(s)	167
DpnI	GATC	8 cut(s)	553, 726, 891, 1029, 1367, 1557, 1928, 1953
DpnII	GATC	8 cut(s)	551, 724, 889, 1027, 1365, 1555, 1926, 1951
DraIII	CACNNNGTG	1 cut(s)	404
DrdI	GACNNNNNNGTC	1 cut(s)	1202
DseDI	GACNNNNNNGTC	1 cut(s)	1202
EaeI	YGGCCR	2 cut(s)	855, 1587
Eam1104I	CTCTTC	3 cut(s)	1746, 1936, 2022
EarI	CTCTTC	3 cut(s)	1746, 1936, 2022
Ecl136II	GAGCTC	1 cut(s)	1519
Eco130I	CCWWGG	2 cut(s)	573, 1361
Eco147I	AGGCCT	1 cut(s)	43
Eco24I	GRGCYC	1 cut(s)	1521
Eco32I	GATATC	3 cut(s)	1254, 1565, 2163
Eco47I	GGWCC	5 cut(s)	102, 521, 626, 926, 1710
Eco53kI	GAGCTC	1 cut(s)	1519
Eco57I	CTGAAG	6 cut(s)	102, 234, 339, 895, 1872, 1917
Eco81I	CCTNAGG	2 cut(s)	170, 266
EcoICRI	GAGCTC	1 cut(s)	1519
EcoO109I	RGGNCCY	1 cut(s)	102
EcoRI	GAATTC	1 cut(s)	2217
EcoRII	CCWGG	3 cut(s)	180, 242, 1468
EcoRV	GATATC	3 cut(s)	1254, 1565, 2163
EcoT14I	CCWWGG	2 cut(s)	573, 1361
EcoT38I	GRGCYC	1 cut(s)	1521
EgeI	GGCGCC	1 cut(s)	167
EheI	GGCGCC	1 cut(s)	167
ErhI	CCWWGG	2 cut(s)	573, 1361
FaqI	GGGAC	3 cut(s)	88, 677, 1723
FauI	CCCGC	2 cut(s)	1142, 1963
Fnu4HI	GCNGC	5 cut(s)	186, 252, 699, 988, 2127
FokI	GGATG	3 cut(s)	817, 983, 2159
FriOI	GRGCYC	1 cut(s)	1521
Fsp4HI	GCNGC	5 cut(s)	186, 252, 699, 988, 2127
FspBI	CTAG	6 cut(s)	99, 234, 486, 630, 1568, 2265
GlaI	GCGC	1 cut(s)	167
GluI	GCNGC	5 cut(s)	186, 252, 699, 988, 2127
GsuI	CTGGAG	1 cut(s)	265
HaeII	RGCGCY	1 cut(s)	169
HaeIII	GGCC	6 cut(s)	43, 580, 857, 1133, 1589, 1885
HapII	CCGG	1 cut(s)	645
HhaI	GCGC	1 cut(s)	168
Hin1I	GRCGYC	1 cut(s)	166
Hin6I	GCGC	1 cut(s)	166
HinP1I	GCGC	1 cut(s)	166
HindIII	AAGCTT	2 cut(s)	1403, 2109
HpaII	CCGG	1 cut(s)	645
HphI	GGTGA	2 cut(s)	416, 511
Hpy166II	GTNNAC	3 cut(s)	421, 1717, 2228
Hpy8I	GTNNAC	3 cut(s)	421, 1717, 2228
HpyCH4III	ACNGT	4 cut(s)	362, 1714, 1840, 2002
HpyF10VI	GCNNNNNNNGC	5 cut(s)	248, 1385, 2078, 2117, 2126
HpyF3I	CTNAG	6 cut(s)	170, 266, 809, 1522, 1656, 1860
Hsp92I	GRCGYC	1 cut(s)	166
HspAI	GCGC	1 cut(s)	166
KasI	GGCGCC	1 cut(s)	165
KpnI	GGTACC	1 cut(s)	1302
Kzo9I	GATC	8 cut(s)	551, 724, 889, 1027, 1365, 1555, 1926, 1951
LguI	GCTCTTC	1 cut(s)	1746
LmnI	GCTCC	4 cut(s)	1018, 1471, 1963, 2301
Lsp1109I	GCAGC	4 cut(s)	172, 238, 685, 2113
LweI	GCATC	5 cut(s)	795, 969, 1375, 1642, 1891
MaeI	CTAG	6 cut(s)	99, 234, 486, 630, 1568, 2265
MaeIII	GTNAC	4 cut(s)	256, 382, 842, 1169
MalI	GATC	8 cut(s)	553, 726, 891, 1029, 1367, 1557, 1928, 1953
MbiI	CCGCTC	1 cut(s)	1958
MboI	GATC	8 cut(s)	551, 724, 889, 1027, 1365, 1555, 1926, 1951
MflI	RGATCY	5 cut(s)	724, 1027, 1365, 1926, 1951
MhlI	GDGCHC	2 cut(s)	1219, 1521
MlsI	TGGCCA	1 cut(s)	1589
MluNI	TGGCCA	1 cut(s)	1589
Mly113I	GGCGCC	1 cut(s)	166
MlyI	GAGTC	5 cut(s)	106, 224, 1721, 1979, 2096
MmeI	TCCRAC	3 cut(s)	249, 2190, 2323
Mox20I	TGGCCA	1 cut(s)	1589
MroXI	GAANNNNTTC	1 cut(s)	726
MscI	TGGCCA	1 cut(s)	1589
MseI	TTAA	6 cut(s)	567, 741, 870, 1038, 1095, 1160
MslI	CAYNNNNRTG	6 cut(s)	840, 851, 965, 1127, 1222, 1667
Msp20I	TGGCCA	1 cut(s)	1589
MspI	CCGG	1 cut(s)	645
MspR9I	CCNGG	3 cut(s)	182, 244, 1470
Mva1269I	GAATGC	2 cut(s)	1551, 2081
MvaI	CCWGG	3 cut(s)	182, 244, 1470
MwoI	GCNNNNNNNGC	5 cut(s)	248, 1385, 2078, 2117, 2126
NarI	GGCGCC	1 cut(s)	166
NcoI	CCATGG	1 cut(s)	1361
NdeII	GATC	8 cut(s)	551, 724, 889, 1027, 1365, 1555, 1926, 1951
NmeAIII	GCCGAG	1 cut(s)	883
NmuCI	GTSAC	1 cut(s)	842
OliI	CACNNNNGTG	1 cut(s)	851
PceI	AGGCCT	1 cut(s)	43
PciSI	GCTCTTC	1 cut(s)	1746
PctI	GAATGC	2 cut(s)	1551, 2081
PdmI	GAANNNNTTC	1 cut(s)	726
PfeI	GAWTC	6 cut(s)	620, 689, 1145, 1732, 1988, 2153
PflMI	CCANNNNNTGG	1 cut(s)	1469
PfoI	TCCNGGA	1 cut(s)	1468
PkrI	GCNGC	5 cut(s)	187, 253, 700, 989, 2128
PleI	GAGTC	5 cut(s)	106, 224, 1721, 1978, 2095
PluTI	GGCGCC	1 cut(s)	169
PpsI	GAGTC	5 cut(s)	106, 224, 1721, 1978, 2095
PpuMI	RGGWCCY	1 cut(s)	102
PsiI	TTATAA	1 cut(s)	2318
Psp124BI	GAGCTC	1 cut(s)	1521
Psp5II	RGGWCCY	1 cut(s)	102
Psp6I	CCWGG	3 cut(s)	180, 242, 1468
PspGI	CCWGG	3 cut(s)	180, 242, 1468
PspPI	GGNCC	7 cut(s)	102, 521, 578, 626, 926, 1132, 1710
PspPPI	RGGWCCY	1 cut(s)	102
PstNI	CAGNNNCTG	3 cut(s)	1469, 1877, 2249
PsuI	RGATCY	5 cut(s)	724, 1027, 1365, 1926, 1951
RsaI	GTAC	4 cut(s)	711, 1300, 1661, 1804
RsaNI	GTAC	4 cut(s)	710, 1299, 1660, 1803
RseI	CAYNNNNRTG	6 cut(s)	840, 851, 965, 1127, 1222, 1667
SacI	GAGCTC	1 cut(s)	1521
SapI	GCTCTTC	1 cut(s)	1746
SaqAI	TTAA	6 cut(s)	567, 741, 870, 1038, 1095, 1160
SatI	GCNGC	5 cut(s)	186, 252, 699, 988, 2127
Sau3AI	GATC	8 cut(s)	551, 724, 889, 1027, 1365, 1555, 1926, 1951
Sau96I	GGNCC	7 cut(s)	102, 521, 578, 626, 926, 1132, 1710
SchI	GAGTC	5 cut(s)	106, 224, 1721, 1979, 2096
ScrFI	CCNGG	3 cut(s)	182, 244, 1470
SduI	GDGCHC	2 cut(s)	1219, 1521
SfaNI	GCATC	5 cut(s)	795, 969, 1375, 1642, 1891
SfcI	CTRYAG	2 cut(s)	468, 885
SfoI	GGCGCC	1 cut(s)	167
SinI	GGWCC	5 cut(s)	102, 521, 626, 926, 1710
SmiMI	CAYNNNNRTG	6 cut(s)	840, 851, 965, 1127, 1222, 1667
SseBI	AGGCCT	1 cut(s)	43
SsiI	CCGC	6 cut(s)	987, 1135, 1156, 1896, 1956, 2254
SspDI	GGCGCC	1 cut(s)	165
SspI	AATATT	1 cut(s)	1269
SspMI	CTAG	6 cut(s)	99, 234, 486, 630, 1568, 2265
SstI	GAGCTC	1 cut(s)	1521
StuI	AGGCCT	1 cut(s)	43
StyD4I	CCNGG	3 cut(s)	180, 242, 1468
StyI	CCWWGG	2 cut(s)	573, 1361
TaaI	ACNGT	4 cut(s)	362, 1714, 1840, 2002
TaqI	TCGA	3 cut(s)	1558, 1730, 2085
TatI	WGTACW	3 cut(s)	709, 1659, 1802
TauI	GCSGC	1 cut(s)	990
TfiI	GAWTC	6 cut(s)	620, 689, 1145, 1732, 1988, 2153
Tru1I	TTAA	6 cut(s)	567, 741, 870, 1038, 1095, 1160
Tru9I	TTAA	6 cut(s)	567, 741, 870, 1038, 1095, 1160
TscAI	CASTG	3 cut(s)	1448, 1780, 2007
TseFI	GTSAC	1 cut(s)	842
TseI	GCWGC	4 cut(s)	185, 251, 698, 2126
Tsp45I	GTSAC	1 cut(s)	842
TspRI	CASTG	3 cut(s)	1448, 1780, 2007
Van91I	CCANNNNNTGG	1 cut(s)	1469
VpaK11BI	GGWCC	5 cut(s)	102, 521, 626, 926, 1710
XapI	RAATTY	4 cut(s)	1007, 1814, 2217, 2275
XbaI	TCTAGA	1 cut(s)	233
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1700
XmnI	GAANNNNTTC	1 cut(s)	726
XspI	CTAG	6 cut(s)	99, 234, 486, 630, 1568, 2265

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.