Rh6AG034600

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0011518
Physical Location & Seq
Forward (+)
4357960 .. 4361793
3834 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG034600.1

Sequence Viewer

Length: 2943 bp
ATGTCGTTCCTCCGGCAACGGCTCCCTCCGGTTCTTCTTCTTCTCCTCTCTCTCCTATTCCTCTCCTTACTCTCTCCCTCCACATCAACCGAGCTCGACCAACTCTTGAAGCTCAAAACCTCCCTTGAAAGTTCAAACCCAACTCTGTTCAGTTCTTGGAAGCAAGAAACTCCCACGTGCAACTTCACTGGGATTGTCTGCAACTCAAATGGGCTGGTCTCAGAAATCAATCTTGCTCAGAAAAACCTTTCTGGCTCTCTTCCTTTCGATGCAATATGCTCGCTTCCACAACTAGAAAAGCTTTCTTTCTGGTCAAATTTCCTGCACGGAAGTCTCACTGAGGATTTGAAGAAGTGTACTAATTTGCAGGAATTGGATTTGGCTAAGAATTCTTTCACAGGAAAAGTACCTGACTTGGGTTCTTTGAGTCAATTGAGGCTGTTGAGTCTGAATGCTAGTGGGGTGTCTGGACTTTTTCCATGGAAATCACTGGAGAATCTGACCGAGTTAACTTTTCTGAGCCTTGGTGATAACAGATTCGATGAAAGTCCTATTACAATGGAGTTGGCAAAGCTTGACAAGCTTTACTGGCTTTACCTCTCAAATTGCAGCATCACAGGTGAAATTCCAGAGGGTATTGGAAACCTGACTCTGCTTGAGAATCTGGAGCTTTCGGATAACCACTTGGTTGGTGAAATTCCTCAGAGTATTACGAATCTCAAGAAGCTCAGGCAACTTGAGCTTTATGCTAATTACCTAACTGGGAAAATCCCACTTGGGCTTGGCAACCTCACAAGCCTTAGGAATTTTGATGTTTCAACTAACAAGCTTGAGGGTGATCTCTCTGAGCTCAAATCCTTGACAGGGCTTGAGTCTGTGCAGCTTTATGAGAATCACTTAGTTGGCGAAGTTCCGGAGGAGTTTGGAGAGTTCAAGAACCTTTATCAGCTCTCACTTTACAAGAACAAGCTCACTGGCCCTCTTCCTCAGAAGCTTGGTTCTTGGTCTGGCCTGGAGTACATTGATGTTTCAGAGAACTACTTGACTGGCCCTATACCCCCTGGCATGTGCAAAAATGAGAAACTGATTGATTTTCTTCTGCTGCAGAACAATTTCACAGGTGGGATTCCTGAGTCCTATGCAAATTGCAAGTCTTTAGTTCGGTTACGTGTGAATAACAATTCACTTTCGGGTACTGTCCCTGTTGGAATTTGGAGCTTGCCACGTGTTGTAGTTATGGATCTTTCTATGAATCAGTTTGAAGGTCCTCTGACTTCAGATGTTGGTAAGGCAAATTCTCTATCATTATTACTCTTAGCTAATAATCGATTTTCGGGTGAATTGCCTGCTGCTTTGTCTGAAGCTACCTCATTGGTAACGATTCAGCTTAGTATGAACCAATTTGAGGGTCAAATCCCAGCAACAATTGGGAACTTGAAGAAATTAGGCAGTTTTCATTTAGAACAAAATTTGTTGTCTGGTGCTATACCGGAATCAATAGGCTCATGTGCTAGGATTTCTGAAATCAACCTTGCCCATAACAATCTTTCTGGCCAAATCCCTCCAAGTCTTGGATCATTGCCTAACTTAAACTCCTTGAACTTATCTGGAAACCAACTTTCAAGTGAAGTTCCTGCTACTTTGTCATCCCTCAAACTCAGCCTTCTTGATCTTACAAACAACCAGTTGATTGGCCGCGTGCCCGAGTTACTATCCATTGCAGCTTTTAATGAAAGCTTTGATGGAAATCCTGGTTTGTGCAGCCAGACCTTGAAGAATTTGCGGCCTTGTTCTTCAAATTCCGGCTCTCCTAGCCACCCACGGATACTTTTGTCTTCTTTTATTGCTGGAGTACTTGCTCTGCTTATTTTGCTTGGTGTGTTCTTGCTTTGGAAGCTAAGGAGGAGCAGTCTTGATCAACCATTGAAGAGTAATTCATGGACTATGAAGCAGTACCATGTGCTTACCTTCACAGAGAATGAAATCCTAGATTCAATCAAAGCTGAAAATTTGATTGGCAAAGGAGGGTCAGGAAATGTATACAAAGTACAACTGAGAGATGGGAAAGCACTTGCTGTGAAGCACATTTGGACTTCACCAGACTCCGCTCACCAGAAAACTTATCGAAGCACCACTTCCATTTTGAAGAAGACTAAATCCAGCTCATCGGAATATGATGCCGAGGTGGCCACACTGAGCTCATTGAGGCATGTGAATGTGGTGAAGCTATACTGCAGCATCAGTAGTGAGGACAGCAATCTGCTGGTTTACGAGTACTTTCCCAATGGGAGCTTATGGGATCAGCTGCACATGAATAACAAGGTCAAGATGGGGTGGGAAGTGAGGTATGAGATTGCTTTGGGGGCTGCAAGAGGATTGGAGTATCTTCACCATGGTAGTCACAGACCTGTTATACACAGAGATGTGAAGTCTAGTAATATTCTGCTAGATGGAGATTGGAAGCCTAGAATTGCTGATTTTGGGCTTGCCAAGATTGTGCAGGCTGGTGGTGAAATGACTCATGTCATTGCTGGGACACTCGGCTACATAGCTCCTGAGTATGCATATACCTACAAGGTAAATGAGAAGAGTGATGTGTATAGCTTTGGGGTGGTCTTGATGGAGTTGGTGACAGGAAAGAGTCCGGTGGAGGCTGAGTTCGGAGAGAACAAGGACATTGTGAGCTGGGTTTGCAGCAAAATGCAGTGCGGAGAGAGTGAGTTTGAGTTGGTGGACTCGAGCATTGACGATACTCTACAAGAAGATGCTCTCAACGTTTTGAGCATTGCAATTCGCTGCACCGCTAGGGTTCCGGTTCTAAGACCCTCGATGAGAATGGTGGTTCAAATGCTGGAAGAGGCACAACCCTGTCAGCTCACCAGCATAAACATTACCAAGGAAGGTGAAAATAACCCGAAAATGGAGCAGAATTTCCACTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0007275 GO:0008150 GO:0009791 GO:0009888 GO:0009960 GO:0010154 GO:0022414 GO:0032501 GO:0032502 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

980

Amino Acids

107.89

Weight (kDa)

5.61

Isoelectric Point (pI)

34.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 30 - 68 3.8e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 163 - 296 1.9e-14 Leucine-rich repeat region
LRR_14 PF23598 409 - 546 8.4e-06 Leucine-rich repeat region
PK_Tyr_Ser-Thr PF07714 667 - 948 5.2e-35 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 669 - 949 6.6e-43 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1571
AccBSI CCGCTC 1 cut(s) 2108
AccI GTMKAC 1 cut(s) 2040
AccII CGCG 1 cut(s) 1698
AccIII TCCGGA 1 cut(s) 913
AciI CCGC 5 cut(s) 1696, 1783, 2106, 2709, 2802
AclI AACGTT 1 cut(s) 2775
AclWI GGATC 3 cut(s) 1248, 1582, 2307
AcoI YGGCCR 3 cut(s) 1552, 1693, 2187
AcuI CTGAAG 2 cut(s) 1260, 1380
AcvI CACGTG 2 cut(s) 177, 1226
AfaI GTAC 8 cut(s) 358, 408, 1019, 1195, 1854, 1955, 2049, 2276
AfiI CCNNNNNNNGG 5 cut(s) 416, 864, 1405, 1571, 2920
AflIII ACRYGT 2 cut(s) 1168, 1225
AjnI CCWGG 3 cut(s) 1011, 1060, 1750
AjuI GAANNNNNNNTTGG 2 cut(s) 1998, 2030
AloI GAACNNNNNNTCC 2 cut(s) 2642, 2674
Alw21I GWGCWC 3 cut(s) 96, 852, 2201
Alw26I GTCTC 2 cut(s) 223, 338
AlwI GGATC 3 cut(s) 1248, 1582, 2307
Ama87I CYCGRG 2 cut(s) 1703, 2737
Aor13HI TCCGGA 1 cut(s) 913
AoxI GGCC 7 cut(s) 976, 1009, 1048, 1552, 1693, 1784, 2187
ArsI GACNNNNNNTTYG 2 cut(s) 1136, 1168
Asp700I GAANNNNTTC 2 cut(s) 392, 1112
AspS9I GGNCC 3 cut(s) 977, 1049, 1265
AvaI CYCGRG 2 cut(s) 1703, 2737
AvaII GGWCC 1 cut(s) 1265
AxyI CCTNAGG 1 cut(s) 800
BaeGI GKGCMC 1 cut(s) 1704
BaeI ACNNNNGTAYC 2 cut(s) 1817, 1850
BalI TGGCCA 2 cut(s) 1554, 2189
BanII GRGCYC 3 cut(s) 96, 852, 2201
BbrPI CACGTG 2 cut(s) 177, 1226
BbsI GAAGAC 2 cut(s) 1827, 2156
Bbv12I GWGCWC 3 cut(s) 96, 852, 2201
BccI CCATC 5 cut(s) 1736, 2054, 2323, 2444, 2614
BceAI ACGGC 1 cut(s) 35
BcgI CGANNNNNNTGC 2 cut(s) 261, 295
BciT130I CCWGG 3 cut(s) 1013, 1062, 1752
BciVI GTATCC 1 cut(s) 1818
BclI TGATCA 1 cut(s) 1915
BcoDI GTCTC 2 cut(s) 223, 338
BfaI CTAG 9 cut(s) 293, 456, 1512, 1812, 1988, 2433, 2447, 2466, 2805
BfmI CTRYAG 2 cut(s) 1103, 2233
BfuI GTATCC 1 cut(s) 1818
BglI GCCNNNNNGGC 1 cut(s) 2186
BmcAI AGTACT 2 cut(s) 1854, 2276
Bme1390I CCNGG 3 cut(s) 1013, 1062, 1752
Bme18I GGWCC 1 cut(s) 1265
BmeT110I CYCGRG 2 cut(s) 1703, 2737
BmgT120I GGNCC 3 cut(s) 977, 1049, 1265
BmiI GGNNCC 2 cut(s) 23, 2811
BmrFI CCNGG 3 cut(s) 1013, 1062, 1752
BmrI ACTGGG 2 cut(s) 198, 771
BmsI GCATC 5 cut(s) 259, 621, 2167, 2247, 2755
BmuI ACTGGG 2 cut(s) 198, 771
BoxI GACNNNNGTC 1 cut(s) 2522
BpiI GAAGAC 2 cut(s) 1827, 2156
BpmI CTGGAG 4 cut(s) 512, 686, 1034, 1869
Bpu10I CCTNAGC 2 cut(s) 728, 1898
BpuEI CTTGAG 5 cut(s) 677, 704, 758, 851, 890
Bsa29I ATCGAT 1 cut(s) 1327
BsaAI YACGTR 3 cut(s) 177, 1169, 1226
BsaBI GATNNNNATC 1 cut(s) 1746
BsaI GGTCTC 1 cut(s) 223
BsaJI CCNNGG 7 cut(s) 479, 523, 1060, 1820, 2181, 2392, 2895
BsaWI WCCGGW 5 cut(s) 28, 913, 1489, 2644, 2812
BsaXI ACNNNNNCTCC 6 cut(s) 1577, 1607, 1894, 1924, 2642, 2672
Bsc4I CCNNNNNNNGG 5 cut(s) 416, 864, 1405, 1571, 2920
Bse1I ACTGG 7 cut(s) 193, 495, 593, 766, 979, 1051, 1684
Bse21I CCTNAGG 1 cut(s) 800
Bse3DI GCAATG 4 cut(s) 1577, 1716, 2526, 2784
Bse8I GATNNNNATC 1 cut(s) 1746
BseAI TCCGGA 1 cut(s) 913
BseBI CCWGG 3 cut(s) 1013, 1062, 1752
BseCI ATCGAT 1 cut(s) 1327
BseDI CCNNGG 7 cut(s) 479, 523, 1060, 1820, 2181, 2392, 2895
BseGI GGATG 1 cut(s) 1646
BseJI GATNNNNATC 1 cut(s) 1746
BseLI CCNNNNNNNGG 5 cut(s) 416, 864, 1405, 1571, 2920
BseMI GCAATG 4 cut(s) 1577, 1716, 2526, 2784
BseNI ACTGG 7 cut(s) 193, 495, 593, 766, 979, 1051, 1684
BseRI GAGGAG 3 cut(s) 35, 932, 1918
BseSI GKGCMC 1 cut(s) 1704
BseYI CCCAGC 3 cut(s) 1417, 2531, 2685
BsgI GTGCAG 6 cut(s) 308, 899, 1780, 2291, 2519, 2782
Bsh1236I CGCG 1 cut(s) 1698
BshFI GGCC 7 cut(s) 978, 1011, 1050, 1554, 1695, 1786, 2189
BshVI ATCGAT 1 cut(s) 1327
BsiHKAI GWGCWC 3 cut(s) 96, 852, 2201
BsiHKCI CYCGRG 2 cut(s) 1703, 2737
BsiSI CCGG 7 cut(s) 13, 29, 914, 1490, 1803, 2645, 2813
BslFI GGGAC 2 cut(s) 1184, 2548
BslI CCNNNNNNNGG 5 cut(s) 416, 864, 1405, 1571, 2920
BsmAI GTCTC 2 cut(s) 223, 338
BsmFI GGGAC 2 cut(s) 1184, 2548
BsmI GAATGC 1 cut(s) 457
BsnI GGCC 7 cut(s) 978, 1011, 1050, 1554, 1695, 1786, 2189
Bso31I GGTCTC 1 cut(s) 223
BsoBI CYCGRG 2 cut(s) 1703, 2737
Bsp1286I GDGCHC 4 cut(s) 96, 852, 1704, 2201
Bsp13I TCCGGA 1 cut(s) 913
Bsp143I GATC 6 cut(s) 838, 1240, 1574, 1669, 1915, 2299
Bsp19I CCATGG 2 cut(s) 479, 2392
BspACI CCGC 5 cut(s) 1696, 1783, 2106, 2709, 2802
BspANI GGCC 7 cut(s) 978, 1011, 1050, 1554, 1695, 1786, 2189
BspDI ATCGAT 1 cut(s) 1327
BspEI TCCGGA 1 cut(s) 913
BspFNI CGCG 1 cut(s) 1698
BspLI GGNNCC 2 cut(s) 23, 2811
BspMAI CTGCAG 2 cut(s) 1107, 2237
BspPI GGATC 3 cut(s) 1248, 1582, 2307
BspTNI GGTCTC 1 cut(s) 223
BsrBI CCGCTC 1 cut(s) 2108
BsrDI GCAATG 4 cut(s) 1577, 1716, 2526, 2784
BsrI ACTGG 7 cut(s) 193, 495, 593, 766, 979, 1051, 1684
BssECI CCNNGG 7 cut(s) 479, 523, 1060, 1820, 2181, 2392, 2895
BssMI GATC 6 cut(s) 838, 1240, 1574, 1669, 1915, 2299
BssNAI GTATAC 1 cut(s) 2041
BssT1I CCWWGG 4 cut(s) 479, 523, 2392, 2895
Bst1107I GTATAC 1 cut(s) 2041
Bst2UI CCWGG 3 cut(s) 1013, 1062, 1752
Bst4CI ACNGT 1 cut(s) 1198
Bst6I CTCTTC 5 cut(s) 264, 987, 1922, 2582, 2850
BstBAI YACGTR 3 cut(s) 177, 1169, 1226
BstC8I GCNNGC 6 cut(s) 281, 1220, 1347, 1700, 2487, 2502
BstDSI CCRYGG 3 cut(s) 479, 1820, 2392
BstF5I GGATG 1 cut(s) 1646
BstFNI CGCG 1 cut(s) 1698
BstKTI GATC 6 cut(s) 841, 1243, 1577, 1672, 1918, 2302
BstMAI GTCTC 2 cut(s) 223, 338
BstMBI GATC 6 cut(s) 838, 1240, 1574, 1669, 1915, 2299
BstMWI GCNNNNNNNGC 9 cut(s) 580, 589, 739, 1812, 1870, 1894, 2186, 2363, 2691
BstNI CCWGG 3 cut(s) 1013, 1062, 1752
BstNSI RCATGY 2 cut(s) 1069, 2213
BstPAI GACNNNNGTC 1 cut(s) 2522
BstSCI CCNGG 3 cut(s) 1011, 1060, 1750
BstSFI CTRYAG 2 cut(s) 1103, 2233
BstSLI GKGCMC 1 cut(s) 1704
BstUI CGCG 1 cut(s) 1698
BstV2I GAAGAC 2 cut(s) 1827, 2156
BstX2I RGATCY 1 cut(s) 1240
BstXI CCANNNNNNTGG 2 cut(s) 689, 1691
BstYI RGATCY 1 cut(s) 1240
BstZ17I GTATAC 1 cut(s) 2041
Bsu15I ATCGAT 1 cut(s) 1327
Bsu36I CCTNAGG 1 cut(s) 800
BsuI GTATCC 1 cut(s) 1818
BsuRI GGCC 7 cut(s) 978, 1011, 1050, 1554, 1695, 1786, 2189
BsuTUI ATCGAT 1 cut(s) 1327
BtgI CCRYGG 3 cut(s) 479, 1820, 2392
BtsCI GGATG 1 cut(s) 1646
BtsI GCAGTG 1 cut(s) 2711
BtsIMutI CAGTG 6 cut(s) 186, 336, 488, 972, 2192, 2711
Cac8I GCNNGC 6 cut(s) 281, 1220, 1347, 1700, 2487, 2502
Cfr13I GGNCC 3 cut(s) 977, 1049, 1265
ClaI ATCGAT 1 cut(s) 1327
Csp6I GTAC 8 cut(s) 357, 407, 1018, 1194, 1853, 1954, 2048, 2275
CviAII CATG 9 cut(s) 480, 1066, 1506, 1938, 1958, 2210, 2311, 2393, 2522
CviQI GTAC 8 cut(s) 357, 407, 1018, 1194, 1853, 1954, 2048, 2275
DpnI GATC 6 cut(s) 840, 1242, 1576, 1671, 1917, 2301
DpnII GATC 6 cut(s) 838, 1240, 1574, 1669, 1915, 2299
EaeI YGGCCR 3 cut(s) 1552, 1693, 2187
Eam1104I CTCTTC 5 cut(s) 264, 987, 1922, 2582, 2850
EarI CTCTTC 5 cut(s) 264, 987, 1922, 2582, 2850
Ecl136II GAGCTC 3 cut(s) 94, 850, 2199
Eco130I CCWWGG 4 cut(s) 479, 523, 2392, 2895
Eco24I GRGCYC 3 cut(s) 96, 852, 2201
Eco31I GGTCTC 1 cut(s) 223
Eco47I GGWCC 1 cut(s) 1265
Eco53kI GAGCTC 3 cut(s) 94, 850, 2199
Eco57I CTGAAG 2 cut(s) 1260, 1380
Eco72I CACGTG 2 cut(s) 177, 1226
Eco81I CCTNAGG 1 cut(s) 800
Eco88I CYCGRG 2 cut(s) 1703, 2737
EcoICRI GAGCTC 3 cut(s) 94, 850, 2199
EcoO109I RGGNCCY 1 cut(s) 1265
EcoRI GAATTC 1 cut(s) 388
EcoRII CCWGG 3 cut(s) 1011, 1060, 1750
EcoT14I CCWWGG 4 cut(s) 479, 523, 2392, 2895
EcoT22I ATGCAT 1 cut(s) 2566
EcoT38I GRGCYC 3 cut(s) 96, 852, 2201
ErhI CCWWGG 4 cut(s) 479, 523, 2392, 2895
FaeI CATG 9 cut(s) 483, 1069, 1509, 1941, 1961, 2213, 2314, 2396, 2525
FalI AAGNNNNNCTT 2 cut(s) 2119, 2151
FaqI GGGAC 2 cut(s) 1184, 2548
FatI CATG 9 cut(s) 479, 1065, 1505, 1937, 1957, 2209, 2310, 2392, 2521
FbaI TGATCA 1 cut(s) 1915
FblI GTMKAC 1 cut(s) 2040
FokI GGATG 1 cut(s) 1633
FriOI GRGCYC 3 cut(s) 96, 852, 2201
FspBI CTAG 9 cut(s) 293, 456, 1512, 1812, 1988, 2433, 2447, 2466, 2805
GsaI CCCAGC 3 cut(s) 1421, 2535, 2689
GsuI CTGGAG 4 cut(s) 512, 686, 1034, 1869
HaeIII GGCC 7 cut(s) 978, 1011, 1050, 1554, 1695, 1786, 2189
HapII CCGG 7 cut(s) 13, 29, 914, 1490, 1803, 2645, 2813
Hin1II CATG 9 cut(s) 483, 1069, 1509, 1941, 1961, 2213, 2314, 2396, 2525
HincII GTYRAC 1 cut(s) 510
HindII GTYRAC 1 cut(s) 510
HindIII AAGCTT 6 cut(s) 299, 572, 581, 827, 992, 1735
HpaI GTTAAC 1 cut(s) 510
HpaII CCGG 7 cut(s) 13, 29, 914, 1490, 1803, 2645, 2813
Hpy166II GTNNAC 5 cut(s) 357, 510, 2041, 2269, 2734
Hpy8I GTNNAC 5 cut(s) 357, 510, 2041, 2269, 2734
HpyAV CCTTC 4 cut(s) 1256, 1673, 1978, 2894
HpyCH4III ACNGT 1 cut(s) 1198
HpyCH4IV ACGT 4 cut(s) 176, 1168, 1225, 2775
HpyF10VI GCNNNNNNNGC 9 cut(s) 580, 589, 739, 1812, 1870, 1894, 2186, 2363, 2691
HpySE526I ACGT 4 cut(s) 176, 1168, 1225, 2775
Hsp92II CATG 9 cut(s) 483, 1069, 1509, 1941, 1961, 2213, 2314, 2396, 2525
Kpn2I TCCGGA 1 cut(s) 913
Ksp22I TGATCA 1 cut(s) 1915
KspAI GTTAAC 1 cut(s) 510
Kzo9I GATC 6 cut(s) 838, 1240, 1574, 1669, 1915, 2299
LmnI GCTCC 7 cut(s) 27, 667, 1215, 1905, 2289, 2557, 2923
LweI GCATC 5 cut(s) 259, 621, 2167, 2247, 2755
MaeI CTAG 9 cut(s) 293, 456, 1512, 1812, 1988, 2433, 2447, 2466, 2805
MaeII ACGT 4 cut(s) 176, 1168, 1225, 2775
MaeIII GTNAC 5 cut(s) 1164, 1375, 1707, 2399, 2629
MalI GATC 6 cut(s) 840, 1242, 1576, 1671, 1917, 2301
MbiI CCGCTC 1 cut(s) 2108
MboI GATC 6 cut(s) 838, 1240, 1574, 1669, 1915, 2299
MfeI CAATTG 2 cut(s) 431, 1425
MflI RGATCY 1 cut(s) 1240
MhlI GDGCHC 4 cut(s) 96, 852, 1704, 2201
MlsI TGGCCA 2 cut(s) 1554, 2189
MluNI TGGCCA 2 cut(s) 1554, 2189
MlyI GAGTC 9 cut(s) 436, 454, 643, 881, 1142, 2096, 2512, 2650, 2729
MmeI TCCRAC 1 cut(s) 1186
Mox20I TGGCCA 2 cut(s) 1554, 2189
Mph1103I ATGCAT 1 cut(s) 2566
MroI TCCGGA 1 cut(s) 913
MroXI GAANNNNTTC 2 cut(s) 392, 1112
MscI TGGCCA 2 cut(s) 1554, 2189
MseI TTAA 3 cut(s) 509, 1589, 1728
MslI CAYNNNNRTG 2 cut(s) 2214, 2421
Msp20I TGGCCA 2 cut(s) 1554, 2189
MspA1I CMGCKG 1 cut(s) 2305
MspI CCGG 7 cut(s) 13, 29, 914, 1490, 1803, 2645, 2813
MspR9I CCNGG 3 cut(s) 1013, 1062, 1752
MunI CAATTG 2 cut(s) 431, 1425
Mva1269I GAATGC 1 cut(s) 457
MvaI CCWGG 3 cut(s) 1013, 1062, 1752
MvnI CGCG 1 cut(s) 1698
MwoI GCNNNNNNNGC 9 cut(s) 580, 589, 739, 1812, 1870, 1894, 2186, 2363, 2691
NcoI CCATGG 2 cut(s) 479, 2392
NdeII GATC 6 cut(s) 838, 1240, 1574, 1669, 1915, 2299
NlaIII CATG 9 cut(s) 483, 1069, 1509, 1941, 1961, 2213, 2314, 2396, 2525
NlaIV GGNNCC 2 cut(s) 23, 2811
NmeAIII GCCGAG 2 cut(s) 2206, 2520
NmuCI GTSAC 2 cut(s) 2399, 2629
NsiI ATGCAT 1 cut(s) 2566
NspI RCATGY 2 cut(s) 1069, 2213
PaeR7I CTCGAG 1 cut(s) 2737
PctI GAATGC 1 cut(s) 457
PdmI GAANNNNTTC 2 cut(s) 392, 1112
PflMI CCANNNNNTGG 1 cut(s) 1571
PleI GAGTC 9 cut(s) 435, 453, 643, 880, 1141, 2096, 2512, 2649, 2729
PmaCI CACGTG 2 cut(s) 177, 1226
PmlI CACGTG 2 cut(s) 177, 1226
PpsI GAGTC 9 cut(s) 435, 453, 643, 880, 1141, 2096, 2512, 2649, 2729
Ppu21I YACGTR 3 cut(s) 177, 1169, 1226
PpuMI RGGWCCY 1 cut(s) 1265
PshAI GACNNNNGTC 1 cut(s) 2522
Psp124BI GAGCTC 3 cut(s) 96, 852, 2201
Psp1406I AACGTT 1 cut(s) 2775
Psp5II RGGWCCY 1 cut(s) 1265
Psp6I CCWGG 3 cut(s) 1011, 1060, 1750
PspCI CACGTG 2 cut(s) 177, 1226
PspFI CCCAGC 3 cut(s) 1417, 2531, 2685
PspGI CCWGG 3 cut(s) 1011, 1060, 1750
PspN4I GGNNCC 2 cut(s) 23, 2811
PspPI GGNCC 3 cut(s) 977, 1049, 1265
PspPPI RGGWCCY 1 cut(s) 1265
PspXI VCTCGAGB 1 cut(s) 2737
PstI CTGCAG 2 cut(s) 1107, 2237
PsuI RGATCY 1 cut(s) 1240
PvuII CAGCTG 1 cut(s) 2305
RsaI GTAC 8 cut(s) 358, 408, 1019, 1195, 1854, 1955, 2049, 2276
RsaNI GTAC 8 cut(s) 357, 407, 1018, 1194, 1853, 1954, 2048, 2275
RseI CAYNNNNRTG 2 cut(s) 2214, 2421
SacI GAGCTC 3 cut(s) 96, 852, 2201
SaqAI TTAA 3 cut(s) 509, 1589, 1728
Sau3AI GATC 6 cut(s) 838, 1240, 1574, 1669, 1915, 2299
Sau96I GGNCC 3 cut(s) 977, 1049, 1265
ScaI AGTACT 2 cut(s) 1854, 2276
SchI GAGTC 9 cut(s) 436, 454, 643, 881, 1142, 2096, 2512, 2650, 2729
ScrFI CCNGG 3 cut(s) 1013, 1062, 1752
SduI GDGCHC 4 cut(s) 96, 852, 1704, 2201
SfaNI GCATC 5 cut(s) 259, 621, 2167, 2247, 2755
SfcI CTRYAG 2 cut(s) 1103, 2233
Sfr274I CTCGAG 1 cut(s) 2737
SinI GGWCC 1 cut(s) 1265
SlaI CTCGAG 1 cut(s) 2737
SmiMI CAYNNNNRTG 2 cut(s) 2214, 2421
SmlI CTYRAG 6 cut(s) 656, 719, 737, 830, 869, 2737
SmoI CTYRAG 6 cut(s) 656, 719, 737, 830, 869, 2737
SsiI CCGC 5 cut(s) 1696, 1783, 2106, 2709, 2802
SspI AATATT 1 cut(s) 2440
SspMI CTAG 9 cut(s) 293, 456, 1512, 1812, 1988, 2433, 2447, 2466, 2805
SstI GAGCTC 3 cut(s) 96, 852, 2201
StyD4I CCNGG 3 cut(s) 1011, 1060, 1750
StyI CCWWGG 4 cut(s) 479, 523, 2392, 2895
TaaI ACNGT 1 cut(s) 1198
TaiI ACGT 4 cut(s) 179, 1171, 1228, 2778
TaqI TCGA 7 cut(s) 96, 267, 540, 1327, 2125, 2738, 2828
TaqII GACCGA 1 cut(s) 518
TatI WGTACW 5 cut(s) 356, 1017, 1852, 2047, 2274
TauI GCSGC 2 cut(s) 1698, 1786
Tru1I TTAA 3 cut(s) 509, 1589, 1728
Tru9I TTAA 3 cut(s) 509, 1589, 1728
TscAI CASTG 6 cut(s) 193, 343, 495, 979, 2199, 2711
TseFI GTSAC 2 cut(s) 2399, 2629
Tsp45I GTSAC 2 cut(s) 2399, 2629
TspDTI ATGAA 9 cut(s) 558, 1265, 1409, 1445, 1746, 1926, 1961, 1995, 2327
TspGWI ACGGA 2 cut(s) 342, 1837
TspRI CASTG 6 cut(s) 193, 343, 495, 979, 2199, 2711
Van91I CCANNNNNTGG 1 cut(s) 1571
VpaK11BI GGWCC 1 cut(s) 1265
XceI RCATGY 2 cut(s) 1069, 2213
XhoI CTCGAG 1 cut(s) 2737
XmiI GTMKAC 1 cut(s) 2040
XmnI GAANNNNTTC 2 cut(s) 392, 1112
XspI CTAG 9 cut(s) 293, 456, 1512, 1812, 1988, 2433, 2447, 2466, 2805
ZrmI AGTACT 2 cut(s) 1854, 2276
Zsp2I ATGCAT 1 cut(s) 2566
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.