Rh6BG029700

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0011518
Physical Location & Seq
Forward (+)
4432138 .. 4435955
3818 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG029700.1

Sequence Viewer

Length: 2946 bp
ATGTCGTTCCTCCGGCAACGGCTCCCTCCGGTTCTTCTTCTTCTTCTCCTCTCTCTCCTATTCCTCTCCTTACTCTCTCCCTCCACATCAACCGAGCTCGACCAACTCTTGAAGCTCAAAACCTCACTTGAAAGTTTAAACCCAACTCTGTTCAGTTCTTGGAAGCAAGAAAATGCCACGTGCAACTTCACTGGGATTGTCTGCAACTTAAATGGGCTGGTCTCAGAAATCAATCTTTCTCAGCAAAACCTTTTTGGCTCTCTTCCTTTCGATGCAATATGCTCGCTCCCACAACTAGAAAAGCTTTCTTTTGGCTCAAATTTCCTGCACGGAAGTCTCACTGAGGATTTGAAGAAGTGTACTAGTTTGCAGGAACTGGATTTGGCTAATAATTCTTTCACAGGAAAAGTACCTGACTTGGGTTCCTTGAGTCAATTGAGGCTGTTGAGTTTGAATGCTAGTGGGGTGTCTGGACTTTTTCCATGGAAATCACTGGAGAATCTGACGGAGTTAACTTTTCTGAGCCTTGGTGATAACAGATTCGATGAAAGTCCTATTACAATGGAGTTGGGAAAGCATGACAAGCTTTACTGGCTTTACCTCTCAAATTGTAGCATCACAGGTGAAATCCCAGAGGGCATTGGAAACCTGACTCTGCTCGAGAATCTGGAGCTTTCGGATAACCACTTGGTTGGGGAAATTCCTCAGAGTATTACAAATCTCAAGAAGCTCAGGCAACTTGAGCTTTATGCTAATTCCCTGACCGGGAAAATCCCAGTTGGGCTTGGCAACCTCACAAGCCTTAGGAATTTTGATGTTTCAAATAACAAGCTTGAGGGTGATCTCTCTGAGCTCAAATCCTTGACAGGGCTTGAGTCTGTGCAGCTTTATGAGAATCACTTAGTTGGCGAAGTTCCGGAGGAGTTTGGAGAGTTCAATAACCTTTATCAGCTCTCACTTTACAAGAACAAGCTCACTGGCCCTCTTCCTCAGAAGCTTGGTTCTTGGTCTGGCCTGGAGTACATTGATGTTTCAGAGAACTACTTGACTGGCCCTATACCCCCTGGCATGTGCAAAAATGAGAAACTGATTGATTTTCTTCTGCTGCAGAACAATTTCACAGGTGGGATTCCTGAGTCCTATGCAAATTGCAAGTCTTTAGTTCGATTACGTGTGAATAACAATTCACTTTCGGGTACTGTCCCTGTTGGAATTTGGAGCTTGCCACGTGTTGTAGTTATGGATCTTTCTATGAATCAGTTTGAAGGTCCTCTGACTTCAGATGTTGGTAAGGCAAATTCTCTATCATTATTACTCTTAGCAAATAATCGATTTTCGGGTGAATTGCCTTCTGCTTTGTCTGAAGCTACCTCATTGGTAACGATTCAGCTTAGTATGAACCAATTTGAGGGTCAAATCCCAGCAACAATTGGGAACTTGAAGAAATTAGGCAGTTTTCATTTAGAACAAAATTTGTTGTCTGGTGCTATACCGGAATCAATAGGCTCATGTGCTAGGATTTCTGAAATCAACCTTGCCCATAACAATCTTTCTGGCCAAATCCCTCCAAGTCTTGGATCATTGCCTAACTTAAACTCCTTGAACTTATCTGGAAACCAACTTTCAAGTGAAGTTCCTGCTACTTTGTCATCCCTCAAACTCAGCCTTCTTGATCTTACAAACAACCAGTTGATTGGCCGCGTGCCCGAGTTACTATCCATTGCAGCTTTTAATGAAAGCTTTGATGGAAATCCTGGTTTGTGCAGCCAGACCTTGAAGAATTTGCGGCCTTGTTCTTCAAATTCCGGCTCTCCTAGCCACCCACGGATACTTTTGTCTTCTTTTATTGCTGGAGTACTTGCTCTGCTTATTTTGCTTGGTGTGTTCTTGCTTTGGAAGCTAAGGAGGAGCAGTCTTGATCAACCATTGAAGAGTAATTCATGGACTATGAAGCAGTACCATGTGCTTACCTTCACAGAGAATGAAATCCTAGATTCAATCAAAGCTGAAAATTTGATTGGCAAAGGAGGGTCAGGAAATGTATACAAAGTACAACTGAGAGATGGGAAAGCACTTGCTGTGAAGCACATTTGGACTTCACCAGACTCCGCTCACCAGAAAACTTATCGAAGCACCACTTCCATTTTGAAGAAGTCTAAATCCAGCTCATCGGAATATGATGCCGAGGTGGCCACACTGAGCTCATTGAGGCATGTGAATGTGGTGAAGCTATACTGCAGCATTAGTAGTGAGGACAGCAATCTGCTGGTTTACGAGTACTTTCCCAATGGGAGCTTATGGGATCAGCTGCACATGAATAACAAGGTCAAGATGGGGTGGGAAGTGAGGTATGAGATTGCTTTGGGGGCTGCAAGAGGATTGGAGTATCTTCACCATGGTAGTCACAGACCTGTTATACACAGAGATGTGAAGTCTAGTAATATTCTGCTAGATGGAGATTGGAAGCCTAGAATTGCTGATTTTGGGCTTGCCAAGATTGTGCAGGCTGGTGGTGAAATGACTCATGTCATTGCTGGGACACTCGGCTACATAGCTCCTGAGTATGCATATACCTACAAGGTAAATGAGAAGAGTGATGTGTATAGCTTTGGGGTGGTCTTGATGGAGTTGGTGACAGGAAAGAGGCCGGTGGAGACTGAGTTTGGAGAGAACAAGGACATTGTGAGCTGGGTTTGCAGCAAAATGCAGTGCGGAGAGAGTGAGTTTGAGTTGGTGGACTCGAGCATTGACGATACTCTACAAGAAGATGCTCTCAACGTTTTGAGCATTGCAATTCGCTGCACCGCTAGGGTTCCGGTTCTAAGACCCTCGATGAGAATGGTGGTTCAAATGCTGGAAGAGGCACAACCTTGTCAGCTCACCAGCATAAGCATTACCAAGGAAGGTGAAAATAACCCGAAAATGGAGCAGAATTTCCACTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0007275 GO:0008150 GO:0009791 GO:0009888 GO:0009960 GO:0010154 GO:0022414 GO:0032501 GO:0032502 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

981

Amino Acids

107.94

Weight (kDa)

5.55

Isoelectric Point (pI)

35.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 31 - 69 5.8e-06 Leucine rich repeat N-terminal domain
LRR_14 PF23598 164 - 300 1.3e-14 Leucine-rich repeat region
LRR_14 PF23598 411 - 548 5.7e-06 Leucine-rich repeat region
PK_Tyr_Ser-Thr PF07714 668 - 949 7.1e-35 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 670 - 950 8.4e-43 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1574
AccBSI CCGCTC 1 cut(s) 2111
AccI GTMKAC 1 cut(s) 2043
AccII CGCG 1 cut(s) 1701
AccIII TCCGGA 1 cut(s) 916
AciI CCGC 5 cut(s) 1699, 1786, 2109, 2712, 2805
AclI AACGTT 1 cut(s) 2778
AclWI GGATC 3 cut(s) 1251, 1585, 2310
AcoI YGGCCR 3 cut(s) 1555, 1696, 2190
AcuI CTGAAG 2 cut(s) 1263, 1383
AcvI CACGTG 2 cut(s) 180, 1229
AfaI GTAC 8 cut(s) 361, 411, 1022, 1198, 1857, 1958, 2052, 2279
AfiI CCNNNNNNNGG 6 cut(s) 419, 765, 867, 1408, 1574, 2923
AflIII ACRYGT 2 cut(s) 1171, 1228
AhlI ACTAGT 1 cut(s) 362
AjnI CCWGG 3 cut(s) 1014, 1063, 1753
AjuI GAANNNNNNNTTGG 2 cut(s) 2001, 2033
Alw21I GWGCWC 3 cut(s) 99, 855, 2204
Alw26I GTCTC 3 cut(s) 226, 341, 2648
AlwI GGATC 3 cut(s) 1251, 1585, 2310
AlwNI CAGNNNCTG 1 cut(s) 376
Ama87I CYCGRG 3 cut(s) 659, 1706, 2740
Aor13HI TCCGGA 1 cut(s) 916
AoxI GGCC 8 cut(s) 979, 1012, 1051, 1555, 1696, 1787, 2190, 2645
ApeKI GCWGC 9 cut(s) 883, 1105, 1724, 1764, 2238, 2308, 2369, 2697, 2799
ArsI GACNNNNNNTTYG 2 cut(s) 1139, 1171
Asp700I GAANNNNTTC 1 cut(s) 1115
AspS9I GGNCC 3 cut(s) 980, 1052, 1268
AsuC2I CCSGG 1 cut(s) 766
AvaI CYCGRG 3 cut(s) 659, 1706, 2740
AvaII GGWCC 1 cut(s) 1268
AxyI CCTNAGG 1 cut(s) 803
BaeGI GKGCMC 1 cut(s) 1707
BaeI ACNNNNGTAYC 2 cut(s) 1820, 1853
BalI TGGCCA 2 cut(s) 1557, 2192
BanII GRGCYC 3 cut(s) 99, 855, 2204
BbrPI CACGTG 2 cut(s) 180, 1229
BbsI GAAGAC 1 cut(s) 1830
Bbv12I GWGCWC 3 cut(s) 99, 855, 2204
BbvI GCAGC 9 cut(s) 895, 1092, 1736, 1776, 2250, 2295, 2356, 2709, 2786
BccI CCATC 5 cut(s) 1739, 2057, 2326, 2447, 2617
BceAI ACGGC 1 cut(s) 35
BcgI CGANNNNNNTGC 2 cut(s) 264, 298
BciT130I CCWGG 3 cut(s) 1016, 1065, 1755
BciVI GTATCC 1 cut(s) 1821
BclI TGATCA 1 cut(s) 1918
BcnI CCSGG 1 cut(s) 766
BcoDI GTCTC 3 cut(s) 226, 341, 2648
BcuI ACTAGT 1 cut(s) 362
BfmI CTRYAG 2 cut(s) 1106, 2236
BfuI GTATCC 1 cut(s) 1821
BglI GCCNNNNNGGC 1 cut(s) 2189
BmcAI AGTACT 2 cut(s) 1857, 2279
Bme1390I CCNGG 4 cut(s) 766, 1016, 1065, 1755
Bme18I GGWCC 1 cut(s) 1268
BmeT110I CYCGRG 3 cut(s) 659, 1706, 2740
BmgT120I GGNCC 3 cut(s) 980, 1052, 1268
BmiI GGNNCC 3 cut(s) 23, 424, 2814
BmrFI CCNGG 4 cut(s) 766, 1016, 1065, 1755
BmrI ACTGGG 2 cut(s) 201, 770
BmsI GCATC 4 cut(s) 262, 624, 2170, 2758
BmuI ACTGGG 2 cut(s) 201, 770
BoxI GACNNNNGTC 1 cut(s) 2525
BpiI GAAGAC 1 cut(s) 1830
BpmI CTGGAG 4 cut(s) 515, 689, 1037, 1872
Bpu10I CCTNAGC 2 cut(s) 731, 1901
BpuEI CTTGAG 5 cut(s) 448, 707, 761, 854, 893
BpuMI CCSGG 1 cut(s) 766
Bsa29I ATCGAT 1 cut(s) 1330
BsaAI YACGTR 3 cut(s) 180, 1172, 1229
BsaBI GATNNNNATC 1 cut(s) 1749
BsaI GGTCTC 1 cut(s) 226
BsaJI CCNNGG 7 cut(s) 482, 526, 1063, 1823, 2184, 2395, 2898
BsaWI WCCGGW 4 cut(s) 28, 916, 1492, 2815
BsaXI ACNNNNNCTCC 6 cut(s) 1580, 1610, 1897, 1927, 2645, 2675
Bsc4I CCNNNNNNNGG 6 cut(s) 419, 765, 867, 1408, 1574, 2923
Bse118I RCCGGY 1 cut(s) 2647
Bse1I ACTGG 8 cut(s) 196, 381, 498, 596, 776, 982, 1054, 1687
Bse21I CCTNAGG 1 cut(s) 803
Bse3DI GCAATG 4 cut(s) 1580, 1719, 2529, 2787
Bse8I GATNNNNATC 1 cut(s) 1749
BseAI TCCGGA 1 cut(s) 916
BseBI CCWGG 3 cut(s) 1016, 1065, 1755
BseCI ATCGAT 1 cut(s) 1330
BseDI CCNNGG 7 cut(s) 482, 526, 1063, 1823, 2184, 2395, 2898
BseGI GGATG 1 cut(s) 1649
BseJI GATNNNNATC 1 cut(s) 1749
BseLI CCNNNNNNNGG 6 cut(s) 419, 765, 867, 1408, 1574, 2923
BseMI GCAATG 4 cut(s) 1580, 1719, 2529, 2787
BseNI ACTGG 8 cut(s) 196, 381, 498, 596, 776, 982, 1054, 1687
BseRI GAGGAG 3 cut(s) 38, 935, 1921
BseSI GKGCMC 1 cut(s) 1707
BseXI GCAGC 9 cut(s) 895, 1092, 1736, 1776, 2250, 2295, 2356, 2709, 2786
BseYI CCCAGC 3 cut(s) 1420, 2534, 2688
BsgI GTGCAG 6 cut(s) 311, 902, 1783, 2294, 2522, 2785
Bsh1236I CGCG 1 cut(s) 1701
BshFI GGCC 8 cut(s) 981, 1014, 1053, 1557, 1698, 1789, 2192, 2647
BshVI ATCGAT 1 cut(s) 1330
BsiHKAI GWGCWC 3 cut(s) 99, 855, 2204
BsiHKCI CYCGRG 3 cut(s) 659, 1706, 2740
BsiSI CCGG 8 cut(s) 13, 29, 765, 917, 1493, 1806, 2648, 2816
BslFI GGGAC 2 cut(s) 1187, 2551
BslI CCNNNNNNNGG 6 cut(s) 419, 765, 867, 1408, 1574, 2923
BsmAI GTCTC 3 cut(s) 226, 341, 2648
BsmFI GGGAC 2 cut(s) 1187, 2551
BsmI GAATGC 1 cut(s) 460
BsnI GGCC 8 cut(s) 981, 1014, 1053, 1557, 1698, 1789, 2192, 2647
Bso31I GGTCTC 1 cut(s) 226
BsoBI CYCGRG 3 cut(s) 659, 1706, 2740
Bsp1286I GDGCHC 4 cut(s) 99, 855, 1707, 2204
Bsp13I TCCGGA 1 cut(s) 916
Bsp143I GATC 6 cut(s) 841, 1243, 1577, 1672, 1918, 2302
Bsp19I CCATGG 2 cut(s) 482, 2395
BspACI CCGC 5 cut(s) 1699, 1786, 2109, 2712, 2805
BspANI GGCC 8 cut(s) 981, 1014, 1053, 1557, 1698, 1789, 2192, 2647
BspDI ATCGAT 1 cut(s) 1330
BspEI TCCGGA 1 cut(s) 916
BspFNI CGCG 1 cut(s) 1701
BspLI GGNNCC 3 cut(s) 23, 424, 2814
BspMAI CTGCAG 2 cut(s) 1110, 2240
BspPI GGATC 3 cut(s) 1251, 1585, 2310
BspTNI GGTCTC 1 cut(s) 226
BsrBI CCGCTC 1 cut(s) 2111
BsrDI GCAATG 4 cut(s) 1580, 1719, 2529, 2787
BsrFI RCCGGY 1 cut(s) 2647
BsrI ACTGG 8 cut(s) 196, 381, 498, 596, 776, 982, 1054, 1687
BssAI RCCGGY 1 cut(s) 2647
BssECI CCNNGG 7 cut(s) 482, 526, 1063, 1823, 2184, 2395, 2898
BssMI GATC 6 cut(s) 841, 1243, 1577, 1672, 1918, 2302
BssNAI GTATAC 1 cut(s) 2044
BssT1I CCWWGG 4 cut(s) 482, 526, 2395, 2898
Bst1107I GTATAC 1 cut(s) 2044
Bst2UI CCWGG 3 cut(s) 1016, 1065, 1755
Bst4CI ACNGT 1 cut(s) 1201
Bst6I CTCTTC 5 cut(s) 267, 990, 1925, 2585, 2853
BstBAI YACGTR 3 cut(s) 180, 1172, 1229
BstC8I GCNNGC 5 cut(s) 284, 1223, 1703, 2490, 2505
BstDSI CCRYGG 3 cut(s) 482, 1823, 2395
BstF5I GGATG 1 cut(s) 1649
BstFNI CGCG 1 cut(s) 1701
BstKTI GATC 6 cut(s) 844, 1246, 1580, 1675, 1921, 2305
BstMAI GTCTC 3 cut(s) 226, 341, 2648
BstMBI GATC 6 cut(s) 841, 1243, 1577, 1672, 1918, 2302
BstMWI GCNNNNNNNGC 9 cut(s) 583, 592, 742, 1815, 1873, 1897, 2189, 2366, 2694
BstNI CCWGG 3 cut(s) 1016, 1065, 1755
BstNSI RCATGY 2 cut(s) 1072, 2216
BstPAI GACNNNNGTC 1 cut(s) 2525
BstSCI CCNGG 4 cut(s) 764, 1014, 1063, 1753
BstSFI CTRYAG 2 cut(s) 1106, 2236
BstSLI GKGCMC 1 cut(s) 1707
BstUI CGCG 1 cut(s) 1701
BstV1I GCAGC 9 cut(s) 895, 1092, 1736, 1776, 2250, 2295, 2356, 2709, 2786
BstV2I GAAGAC 1 cut(s) 1830
BstX2I RGATCY 1 cut(s) 1243
BstXI CCANNNNNNTGG 2 cut(s) 692, 1694
BstYI RGATCY 1 cut(s) 1243
BstZ17I GTATAC 1 cut(s) 2044
Bsu15I ATCGAT 1 cut(s) 1330
Bsu36I CCTNAGG 1 cut(s) 803
BsuI GTATCC 1 cut(s) 1821
BsuRI GGCC 8 cut(s) 981, 1014, 1053, 1557, 1698, 1789, 2192, 2647
BsuTUI ATCGAT 1 cut(s) 1330
BtgI CCRYGG 3 cut(s) 482, 1823, 2395
BtsCI GGATG 1 cut(s) 1649
BtsI GCAGTG 1 cut(s) 2714
BtsIMutI CAGTG 6 cut(s) 189, 339, 491, 975, 2195, 2714
Cac8I GCNNGC 5 cut(s) 284, 1223, 1703, 2490, 2505
CaiI CAGNNNCTG 1 cut(s) 376
Cfr10I RCCGGY 1 cut(s) 2647
Cfr13I GGNCC 3 cut(s) 980, 1052, 1268
ClaI ATCGAT 1 cut(s) 1330
Csp6I GTAC 8 cut(s) 360, 410, 1021, 1197, 1856, 1957, 2051, 2278
CviQI GTAC 8 cut(s) 360, 410, 1021, 1197, 1856, 1957, 2051, 2278
DpnI GATC 6 cut(s) 843, 1245, 1579, 1674, 1920, 2304
DpnII GATC 6 cut(s) 841, 1243, 1577, 1672, 1918, 2302
DraI TTTAAA 1 cut(s) 138
EaeI YGGCCR 3 cut(s) 1555, 1696, 2190
Eam1104I CTCTTC 5 cut(s) 267, 990, 1925, 2585, 2853
EarI CTCTTC 5 cut(s) 267, 990, 1925, 2585, 2853
Ecl136II GAGCTC 3 cut(s) 97, 853, 2202
Eco130I CCWWGG 4 cut(s) 482, 526, 2395, 2898
Eco24I GRGCYC 3 cut(s) 99, 855, 2204
Eco31I GGTCTC 1 cut(s) 226
Eco47I GGWCC 1 cut(s) 1268
Eco53kI GAGCTC 3 cut(s) 97, 853, 2202
Eco57I CTGAAG 2 cut(s) 1263, 1383
Eco72I CACGTG 2 cut(s) 180, 1229
Eco81I CCTNAGG 1 cut(s) 803
Eco88I CYCGRG 3 cut(s) 659, 1706, 2740
EcoICRI GAGCTC 3 cut(s) 97, 853, 2202
EcoO109I RGGNCCY 1 cut(s) 1268
EcoRII CCWGG 3 cut(s) 1014, 1063, 1753
EcoT14I CCWWGG 4 cut(s) 482, 526, 2395, 2898
EcoT22I ATGCAT 1 cut(s) 2569
EcoT38I GRGCYC 3 cut(s) 99, 855, 2204
ErhI CCWWGG 4 cut(s) 482, 526, 2395, 2898
FalI AAGNNNNNCTT 2 cut(s) 2122, 2154
FaqI GGGAC 2 cut(s) 1187, 2551
FbaI TGATCA 1 cut(s) 1918
FblI GTMKAC 1 cut(s) 2043
FokI GGATG 1 cut(s) 1636
FriOI GRGCYC 3 cut(s) 99, 855, 2204
GsaI CCCAGC 3 cut(s) 1424, 2538, 2692
GsuI CTGGAG 4 cut(s) 515, 689, 1037, 1872
HaeIII GGCC 8 cut(s) 981, 1014, 1053, 1557, 1698, 1789, 2192, 2647
HapII CCGG 8 cut(s) 13, 29, 765, 917, 1493, 1806, 2648, 2816
HincII GTYRAC 1 cut(s) 513
HindII GTYRAC 1 cut(s) 513
HindIII AAGCTT 5 cut(s) 302, 584, 830, 995, 1738
HpaI GTTAAC 1 cut(s) 513
HpaII CCGG 8 cut(s) 13, 29, 765, 917, 1493, 1806, 2648, 2816
Hpy166II GTNNAC 5 cut(s) 360, 513, 2044, 2272, 2737
Hpy8I GTNNAC 5 cut(s) 360, 513, 2044, 2272, 2737
HpyAV CCTTC 5 cut(s) 1259, 1359, 1676, 1981, 2897
HpyCH4III ACNGT 1 cut(s) 1201
HpyCH4IV ACGT 4 cut(s) 179, 1171, 1228, 2778
HpyF10VI GCNNNNNNNGC 9 cut(s) 583, 592, 742, 1815, 1873, 1897, 2189, 2366, 2694
HpySE526I ACGT 4 cut(s) 179, 1171, 1228, 2778
Kpn2I TCCGGA 1 cut(s) 916
Ksp22I TGATCA 1 cut(s) 1918
KspAI GTTAAC 1 cut(s) 513
Kzo9I GATC 6 cut(s) 841, 1243, 1577, 1672, 1918, 2302
LmnI GCTCC 8 cut(s) 27, 291, 670, 1218, 1908, 2292, 2560, 2926
Lsp1109I GCAGC 9 cut(s) 895, 1092, 1736, 1776, 2250, 2295, 2356, 2709, 2786
LweI GCATC 4 cut(s) 262, 624, 2170, 2758
MaeII ACGT 4 cut(s) 179, 1171, 1228, 2778
MaeIII GTNAC 4 cut(s) 1378, 1710, 2402, 2632
MalI GATC 6 cut(s) 843, 1245, 1579, 1674, 1920, 2304
MbiI CCGCTC 1 cut(s) 2111
MboI GATC 6 cut(s) 841, 1243, 1577, 1672, 1918, 2302
MfeI CAATTG 2 cut(s) 434, 1428
MflI RGATCY 1 cut(s) 1243
MhlI GDGCHC 4 cut(s) 99, 855, 1707, 2204
MlsI TGGCCA 2 cut(s) 1557, 2192
MluNI TGGCCA 2 cut(s) 1557, 2192
MlyI GAGTC 7 cut(s) 439, 646, 884, 1145, 2099, 2515, 2732
MmeI TCCRAC 1 cut(s) 1189
Mox20I TGGCCA 2 cut(s) 1557, 2192
Mph1103I ATGCAT 1 cut(s) 2569
MroI TCCGGA 1 cut(s) 916
MroXI GAANNNNTTC 1 cut(s) 1115
MscI TGGCCA 2 cut(s) 1557, 2192
MseI TTAA 5 cut(s) 137, 209, 512, 1592, 1731
MslI CAYNNNNRTG 2 cut(s) 2217, 2424
Msp20I TGGCCA 2 cut(s) 1557, 2192
MspA1I CMGCKG 1 cut(s) 2308
MspI CCGG 8 cut(s) 13, 29, 765, 917, 1493, 1806, 2648, 2816
MspR9I CCNGG 4 cut(s) 766, 1016, 1065, 1755
MssI GTTTAAAC 1 cut(s) 138
MunI CAATTG 2 cut(s) 434, 1428
Mva1269I GAATGC 1 cut(s) 460
MvaI CCWGG 3 cut(s) 1016, 1065, 1755
MvnI CGCG 1 cut(s) 1701
MwoI GCNNNNNNNGC 9 cut(s) 583, 592, 742, 1815, 1873, 1897, 2189, 2366, 2694
NciI CCSGG 1 cut(s) 766
NcoI CCATGG 2 cut(s) 482, 2395
NdeII GATC 6 cut(s) 841, 1243, 1577, 1672, 1918, 2302
NlaIV GGNNCC 3 cut(s) 23, 424, 2814
NmeAIII GCCGAG 2 cut(s) 2209, 2523
NmuCI GTSAC 2 cut(s) 2402, 2632
NsiI ATGCAT 1 cut(s) 2569
NspI RCATGY 2 cut(s) 1072, 2216
PaeR7I CTCGAG 2 cut(s) 659, 2740
PctI GAATGC 1 cut(s) 460
PdmI GAANNNNTTC 1 cut(s) 1115
PfeI GAWTC 9 cut(s) 499, 540, 664, 895, 1129, 1255, 1384, 1496, 1994
PflMI CCANNNNNTGG 1 cut(s) 1574
PleI GAGTC 7 cut(s) 438, 646, 883, 1144, 2099, 2515, 2732
PmaCI CACGTG 2 cut(s) 180, 1229
PmeI GTTTAAAC 1 cut(s) 138
PmlI CACGTG 2 cut(s) 180, 1229
PpsI GAGTC 7 cut(s) 438, 646, 883, 1144, 2099, 2515, 2732
Ppu21I YACGTR 3 cut(s) 180, 1172, 1229
PpuMI RGGWCCY 1 cut(s) 1268
PshAI GACNNNNGTC 1 cut(s) 2525
Psp124BI GAGCTC 3 cut(s) 99, 855, 2204
Psp1406I AACGTT 1 cut(s) 2778
Psp5II RGGWCCY 1 cut(s) 1268
Psp6I CCWGG 3 cut(s) 1014, 1063, 1753
PspCI CACGTG 2 cut(s) 180, 1229
PspFI CCCAGC 3 cut(s) 1420, 2534, 2688
PspGI CCWGG 3 cut(s) 1014, 1063, 1753
PspN4I GGNNCC 3 cut(s) 23, 424, 2814
PspPI GGNCC 3 cut(s) 980, 1052, 1268
PspPPI RGGWCCY 1 cut(s) 1268
PspXI VCTCGAGB 1 cut(s) 2740
PstI CTGCAG 2 cut(s) 1110, 2240
PstNI CAGNNNCTG 1 cut(s) 376
PsuI RGATCY 1 cut(s) 1243
PvuII CAGCTG 1 cut(s) 2308
RsaI GTAC 8 cut(s) 361, 411, 1022, 1198, 1857, 1958, 2052, 2279
RsaNI GTAC 8 cut(s) 360, 410, 1021, 1197, 1856, 1957, 2051, 2278
RseI CAYNNNNRTG 2 cut(s) 2217, 2424
SacI GAGCTC 3 cut(s) 99, 855, 2204
SaqAI TTAA 5 cut(s) 137, 209, 512, 1592, 1731
Sau3AI GATC 6 cut(s) 841, 1243, 1577, 1672, 1918, 2302
Sau96I GGNCC 3 cut(s) 980, 1052, 1268
ScaI AGTACT 2 cut(s) 1857, 2279
SchI GAGTC 7 cut(s) 439, 646, 884, 1145, 2099, 2515, 2732
ScrFI CCNGG 4 cut(s) 766, 1016, 1065, 1755
SduI GDGCHC 4 cut(s) 99, 855, 1707, 2204
SfaNI GCATC 4 cut(s) 262, 624, 2170, 2758
SfcI CTRYAG 2 cut(s) 1106, 2236
Sfr274I CTCGAG 2 cut(s) 659, 2740
SinI GGWCC 1 cut(s) 1268
SlaI CTCGAG 2 cut(s) 659, 2740
SmiMI CAYNNNNRTG 2 cut(s) 2217, 2424
SmlI CTYRAG 7 cut(s) 427, 659, 722, 740, 833, 872, 2740
SmoI CTYRAG 7 cut(s) 427, 659, 722, 740, 833, 872, 2740
SpeI ACTAGT 1 cut(s) 362
SsiI CCGC 5 cut(s) 1699, 1786, 2109, 2712, 2805
SspI AATATT 1 cut(s) 2443
SstI GAGCTC 3 cut(s) 99, 855, 2204
StyD4I CCNGG 4 cut(s) 764, 1014, 1063, 1753
StyI CCWWGG 4 cut(s) 482, 526, 2395, 2898
TaaI ACNGT 1 cut(s) 1201
TaiI ACGT 4 cut(s) 182, 1174, 1231, 2781
TaqI TCGA 9 cut(s) 99, 270, 543, 660, 1165, 1330, 2128, 2741, 2831
TatI WGTACW 5 cut(s) 359, 1020, 1855, 2050, 2277
TauI GCSGC 2 cut(s) 1701, 1789
TfiI GAWTC 9 cut(s) 499, 540, 664, 895, 1129, 1255, 1384, 1496, 1994
Tru1I TTAA 5 cut(s) 137, 209, 512, 1592, 1731
Tru9I TTAA 5 cut(s) 137, 209, 512, 1592, 1731
TscAI CASTG 6 cut(s) 196, 346, 498, 982, 2202, 2714
TseFI GTSAC 2 cut(s) 2402, 2632
TseI GCWGC 9 cut(s) 883, 1105, 1724, 1764, 2238, 2308, 2369, 2697, 2799
Tsp45I GTSAC 2 cut(s) 2402, 2632
TspDTI ATGAA 9 cut(s) 561, 1268, 1412, 1448, 1749, 1929, 1964, 1998, 2330
TspGWI ACGGA 3 cut(s) 345, 521, 1840
TspRI CASTG 6 cut(s) 196, 346, 498, 982, 2202, 2714
Van91I CCANNNNNTGG 1 cut(s) 1574
VpaK11BI GGWCC 1 cut(s) 1268
XceI RCATGY 2 cut(s) 1072, 2216
XhoI CTCGAG 2 cut(s) 659, 2740
XmiI GTMKAC 1 cut(s) 2043
XmnI GAANNNNTTC 1 cut(s) 1115
ZrmI AGTACT 2 cut(s) 1857, 2279
Zsp2I ATGCAT 1 cut(s) 2569
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.