Rh6DG029000

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0011518
Physical Location & Seq
Forward (+)
2608500 .. 2612164
3665 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG029000.1

Sequence Viewer

Length: 2949 bp
ATGTCGTTCCTCCGGCAACGGCTCCCTCCGGTTCTTCTTCTTCTTCTCTCTCTCCTCTTCCTCTCCCTACTCTCTCCCTCCACATCAACCGAGCTCGACCAACTCTTGAAGCTCAAAACCTCCCTTGAAAGTTCAAACCAAACTCTGTTCAGTTCTTGGAAGCAAGAAACTCCCACGTGCAACTTCACTGGGATTGTCTGCAACTCAAATGGCCTGGTGTCAGAAATCAATCTCTCTCAGCAAAACCTTTCTGGCTCTCTTCCTTTCGACGCAATATGCTCGCTTCCACAACTAGAAAAGCTTTCTTTCGGGTCAAATTTCCTGCACGGAAGTCTCACTGAGGATTTGAAGAAGTGTACTAATTTGCAGGAACTGGATTTGGCTAAGAATTCTTTCACAGGAAAAGTACCTGACTTGGGTTCTTTGAGTCAATTGAGGCTGTTGAATTTGAATGCTAGTGGGGTGTCTGGACTTTTTCCATGGAAATCACTGGAGAATCTGACCGAGTTAACTTTTCTGAGCCTTGGTGATAACAGATTCGATGAAAGTCCTATTACAATGGAGTTGGGAAAGCTTGACAAGCTTTACTGGCTTTACCTCTCAAATTGTAGCATCACAGGTGAAATCCCAGAGGGTATTGGAAACCTGACTCTGCTTGAGAATCTGGAGCTTTCGGATAACCACTTGGTTGGTGAAATTCCTCAGAGTATTACAAATCTCAAGAAGCTCAGGCAACTTGAGCTTTATGCTAATTACCTGACTGGGAAAATCCCAGTTGGGCTTGGCAACCTCACAAGCCTTAGGAATTTTGATGTTTCAACTAACAAGCTTGAGGGTGATCTCTCTGAGCTCAAATCCTTGACAGGGCTTGAGTCTGTGCAGCTTTATGAGAATCACTTAGTTGGCGAAGTTCCGGAGGAGTTTGGAGAGTTCAAGAACCTTTATCAGCTCTCACTTTACAAGAACAAGCTCACTGGCCCTCTTCCTCAGAAGCTTGGTTCTTGGTCAGGCATGGAGTACATTGATGTTTCAGAGAACTATTTGACTGGCCCTATACCCCCTGGCATGTGCAAAAATGAGAAACTGATTGATTTTCTGCTGCTGCAGAACAATTTCACAGGTGGGATTCCTGAGTCCTACGCAAATTGCAAGTCTATAGTTCGGTTACGTGTGAATAACAATTCGCTTTCGGGTACTGTCCCTGTTGGAGTTTGGAGCTTGCCAAGTGTTACAATTCTTGATCTTTCTATGAATCAGTTTGAAGGTCCCCTGGCTTCAGATGTTGGTAAGGCAAATTCTCTGTCATTATTACTCTTAGCTAATAATCGCTTTTCGGGTGAATTGCCTGCTGCTTTGTCTGAAGCTACCTCATTGGTTACGATTCAGCTTAGCGTGAACCAATTTGAGGGTCAAATTCCAGCAACAATTGGGAACTTGAAGAAATTAGGCAGTCTTCATTTAGAACAAAATTTGTTGTCTGGTGCCATACCGGAATCATTAGGCTCATGTGTTTGGATTTCTGAAATCAACCTAGCCCATAACAGTCTTTCTGGCCAAATCCCACCAAGTCTTGGATCATTGCCTAACTTAAATTCCTTGAACTTATCTGGAAACCAACTTTCAAGTGAAGTTCCTGCTACATTGTCATCCCTCAAACTCAGCCTTCTTGATCTTACAAACAACCAGTTGATTGGCCGTGTGCCCGAGTTACTATCCATTGCAGCTTTTAATGAAAGCTTTGATGGAAATCCTGGTTTGTGCAGCCAGACCTTGGAGAATTTGCGGCCTTGTTCTTCAAATTCGGGCTCTCCTAGCCACTCACGGATACTTTTGTCTTCTTTTATTGCTGGAGTACTTGTTCTGCTTATTTTGCTTGGTGTGTTCTTGCTTTGGAAGCTAAGGAGGAGCGATCTTGATCAACCATTGAAGAGTAATTCATGGACTATGAAGCAGTACCATGTGCTAACCTTCACAGAGAATGAAATCCTAGATTCAATCAAAGCTGAAAATTTGATTGGCAAAGGAGGGTCAGGAAATGTATACAAAGTACAACTGAGAGATGGGAAAGCACTTGCTGTGAAGCACATTTGGGCTTCACCAGACTCCGCTCACCAGAAAACTTATCGAAGCACCACTTCCATTTTGAAGAAGTCTAAATCCAGCTCATCGGAATATGATGCCGAGGTGGCCACACTGAGCTCATTGAGGCATGTGAATGTGGTGAAGCTATACTGCAGCATAAGTAGTGAGGACAGCAATCTGCTGGTTTACGAGTACTTTCCCAATGGGAGCTTATGGGATCAGCTGCACATGAATCAGAAGGTCAAGATGGGGTGGGAAGTGAGGTATGAGATTGCTTTGGGGGCTGCAAGAGGATTGGAGTATCTTCACCATGGTAGTCACAGACCTGTTATACACAGAGATGTGAAGTCTAGTAATATTCTGGTAGATGGAGATTGGAAGCCTAAAATTGCTGATTTTGGGCTTGCCAAGATTGTGCAGGCTGGTGGTGAAATGACTCATGTCATTGCTGGAACACTTGGCTACATAGCTCCTGAGTATGCATATACCTACAAGGTGAATGAGAAGAGTGATGTGTATAGCTTTGGGGTGGTCTTGATGGAGTTGGTGACAGGAAAGAGGCCGGTGGAGACTGATTTTGGAGAGAACAAGGACATAGTGAGCTGGGTTTGCAGCAAAATGCAGTGCGAAGAGAGTGAGCTTGAGTTGGTGGACTCGAGCATCGATGATGCTCAACAAGAAGATGCCCTCAACGTTTTGAGCATTGCAATTCGCTGCACCGCTAGGGTTCCGGTTCTAAGACCCTCAATGAGAATGGTGGTTCAAATGCTGGAAGAGGCACAACCTTGTCAGCTCACCAGCATAAGCATTACCAAGGAAGGTGAAAATAACCCGAAAATGGAGCAGAATTTCCACTACAGAATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0003006 GO:0007275 GO:0008150 GO:0009791 GO:0009888 GO:0009960 GO:0010154 GO:0022414 GO:0032501 GO:0032502 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

982

Amino Acids

108.02

Weight (kDa)

5.39

Isoelectric Point (pI)

35.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 30 - 68 1.5e-06 Leucine rich repeat N-terminal domain
LRR_14 PF23598 162 - 299 6.4e-16 Leucine-rich repeat region
LRR_14 PF23598 406 - 546 6.2e-06 Leucine-rich repeat region
PK_Tyr_Ser-Thr PF07714 667 - 950 2.2e-36 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 669 - 949 2.2e-43 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1481
AccB7I CCANNNNNTGG 2 cut(s) 1571, 1771
AccBSI CCGCTC 1 cut(s) 2108
AccI GTMKAC 1 cut(s) 2040
AccIII TCCGGA 1 cut(s) 913
AciI CCGC 3 cut(s) 1783, 2106, 2802
AclI AACGTT 1 cut(s) 2775
AclWI GGATC 2 cut(s) 1582, 2307
AcoI YGGCCR 3 cut(s) 1552, 1693, 2187
AcuI CTGAAG 2 cut(s) 1260, 1380
AcvI CACGTG 1 cut(s) 177
AfaI GTAC 8 cut(s) 358, 408, 1019, 1195, 1854, 1955, 2049, 2276
AfiI CCNNNNNNNGG 6 cut(s) 416, 864, 1405, 1571, 1771, 2920
AflIII ACRYGT 1 cut(s) 1168
AjnI CCWGG 4 cut(s) 213, 1060, 1269, 1750
AjuI GAANNNNNNNTTGG 2 cut(s) 1998, 2030
AloI GAACNNNNNNTCC 2 cut(s) 1842, 1874
Alw21I GWGCWC 3 cut(s) 96, 852, 2201
Alw26I GTCTC 2 cut(s) 338, 2645
AlwI GGATC 2 cut(s) 1582, 2307
AlwNI CAGNNNCTG 1 cut(s) 373
Ama87I CYCGRG 2 cut(s) 1703, 2737
Aor13HI TCCGGA 1 cut(s) 913
AoxI GGCC 8 cut(s) 211, 976, 1048, 1552, 1693, 1784, 2187, 2642
ArsI GACNNNNNNTTYG 4 cut(s) 1136, 1168, 1286, 1318
Asp700I GAANNNNTTC 2 cut(s) 392, 1112
AspS9I GGNCC 3 cut(s) 977, 1049, 1265
AvaI CYCGRG 2 cut(s) 1703, 2737
AvaII GGWCC 1 cut(s) 1265
AxyI CCTNAGG 1 cut(s) 800
BaeGI GKGCMC 1 cut(s) 1704
BaeI ACNNNNGTAYC 2 cut(s) 1817, 1850
BalI TGGCCA 2 cut(s) 1554, 2189
BanI GGYRCC 1 cut(s) 1481
BanII GRGCYC 4 cut(s) 96, 852, 1808, 2201
BbrPI CACGTG 1 cut(s) 177
BbsI GAAGAC 2 cut(s) 1445, 1827
Bbv12I GWGCWC 3 cut(s) 96, 852, 2201
BccI CCATC 5 cut(s) 1736, 2054, 2323, 2444, 2614
BceAI ACGGC 2 cut(s) 35, 1680
BcgI CGANNNNNNTGC 2 cut(s) 261, 295
BciT130I CCWGG 4 cut(s) 215, 1062, 1271, 1752
BciVI GTATCC 1 cut(s) 1818
BclI TGATCA 1 cut(s) 1915
BcoDI GTCTC 2 cut(s) 338, 2645
BfaI CTAG 7 cut(s) 293, 456, 1532, 1812, 1988, 2433, 2805
BfmI CTRYAG 4 cut(s) 1103, 1155, 2233, 2938
BfuI GTATCC 1 cut(s) 1818
BglI GCCNNNNNGGC 1 cut(s) 2186
BlpI GCTNAGC 1 cut(s) 1388
BmcAI AGTACT 2 cut(s) 1854, 2276
Bme1390I CCNGG 4 cut(s) 215, 1062, 1271, 1752
Bme18I GGWCC 1 cut(s) 1265
BmeT110I CYCGRG 2 cut(s) 1703, 2737
BmgT120I GGNCC 3 cut(s) 977, 1049, 1265
BmiI GGNNCC 4 cut(s) 23, 1267, 1483, 2811
BmrFI CCNGG 4 cut(s) 215, 1062, 1271, 1752
BmrI ACTGGG 3 cut(s) 198, 767, 771
BmsI GCATC 5 cut(s) 621, 2167, 2740, 2751, 2755
BmuI ACTGGG 3 cut(s) 198, 767, 771
BoxI GACNNNNGTC 1 cut(s) 2522
BpiI GAAGAC 2 cut(s) 1445, 1827
BpmI CTGGAG 3 cut(s) 512, 686, 1869
Bpu10I CCTNAGC 2 cut(s) 728, 1898
Bpu1102I GCTNAGC 1 cut(s) 1388
BpuEI CTTGAG 6 cut(s) 677, 704, 758, 851, 890, 2744
Bsa29I ATCGAT 1 cut(s) 2745
BsaAI YACGTR 2 cut(s) 177, 1169
BsaBI GATNNNNATC 2 cut(s) 1746, 1914
BsaJI CCNNGG 8 cut(s) 479, 523, 1060, 1269, 1770, 2181, 2392, 2895
BsaWI WCCGGW 4 cut(s) 28, 913, 1489, 2812
BsaXI ACNNNNNCTCC 2 cut(s) 1842, 1872
Bsc4I CCNNNNNNNGG 6 cut(s) 416, 864, 1405, 1571, 1771, 2920
Bse118I RCCGGY 1 cut(s) 2644
Bse1I ACTGG 9 cut(s) 193, 378, 495, 593, 766, 773, 979, 1051, 1684
Bse21I CCTNAGG 1 cut(s) 800
Bse3DI GCAATG 4 cut(s) 1577, 1716, 2526, 2784
Bse8I GATNNNNATC 2 cut(s) 1746, 1914
BseAI TCCGGA 1 cut(s) 913
BseBI CCWGG 4 cut(s) 215, 1062, 1271, 1752
BseCI ATCGAT 1 cut(s) 2745
BseDI CCNNGG 8 cut(s) 479, 523, 1060, 1269, 1770, 2181, 2392, 2895
BseGI GGATG 1 cut(s) 1646
BseJI GATNNNNATC 2 cut(s) 1746, 1914
BseLI CCNNNNNNNGG 6 cut(s) 416, 864, 1405, 1571, 1771, 2920
BseMI GCAATG 4 cut(s) 1577, 1716, 2526, 2784
BseNI ACTGG 9 cut(s) 193, 378, 495, 593, 766, 773, 979, 1051, 1684
BseRI GAGGAG 3 cut(s) 44, 932, 1918
BseSI GKGCMC 1 cut(s) 1704
BseYI CCCAGC 1 cut(s) 2685
BsgI GTGCAG 6 cut(s) 308, 899, 1780, 2291, 2519, 2782
BshFI GGCC 8 cut(s) 213, 978, 1050, 1554, 1695, 1786, 2189, 2644
BshNI GGYRCC 1 cut(s) 1481
BshVI ATCGAT 1 cut(s) 2745
BsiHKAI GWGCWC 3 cut(s) 96, 852, 2201
BsiHKCI CYCGRG 2 cut(s) 1703, 2737
BsiSI CCGG 6 cut(s) 13, 29, 914, 1490, 2645, 2813
BslFI GGGAC 2 cut(s) 1184, 1251
BslI CCNNNNNNNGG 6 cut(s) 416, 864, 1405, 1571, 1771, 2920
BsmAI GTCTC 2 cut(s) 338, 2645
BsmFI GGGAC 2 cut(s) 1184, 1251
BsmI GAATGC 1 cut(s) 457
BsnI GGCC 8 cut(s) 213, 978, 1050, 1554, 1695, 1786, 2189, 2644
BsoBI CYCGRG 2 cut(s) 1703, 2737
Bsp1286I GDGCHC 5 cut(s) 96, 852, 1704, 1808, 2201
Bsp13I TCCGGA 1 cut(s) 913
Bsp143I GATC 7 cut(s) 838, 1240, 1574, 1669, 1909, 1915, 2299
Bsp1720I GCTNAGC 1 cut(s) 1388
Bsp19I CCATGG 2 cut(s) 479, 2392
BspACI CCGC 3 cut(s) 1783, 2106, 2802
BspANI GGCC 8 cut(s) 213, 978, 1050, 1554, 1695, 1786, 2189, 2644
BspDI ATCGAT 1 cut(s) 2745
BspEI TCCGGA 1 cut(s) 913
BspLI GGNNCC 4 cut(s) 23, 1267, 1483, 2811
BspMAI CTGCAG 2 cut(s) 1107, 2237
BspPI GGATC 2 cut(s) 1582, 2307
BspT107I GGYRCC 1 cut(s) 1481
BsrBI CCGCTC 1 cut(s) 2108
BsrDI GCAATG 4 cut(s) 1577, 1716, 2526, 2784
BsrFI RCCGGY 1 cut(s) 2644
BsrI ACTGG 9 cut(s) 193, 378, 495, 593, 766, 773, 979, 1051, 1684
BssAI RCCGGY 1 cut(s) 2644
BssECI CCNNGG 8 cut(s) 479, 523, 1060, 1269, 1770, 2181, 2392, 2895
BssMI GATC 7 cut(s) 838, 1240, 1574, 1669, 1909, 1915, 2299
BssNAI GTATAC 1 cut(s) 2041
BssT1I CCWWGG 5 cut(s) 479, 523, 1770, 2392, 2895
Bst1107I GTATAC 1 cut(s) 2041
Bst2UI CCWGG 4 cut(s) 215, 1062, 1271, 1752
Bst4CI ACNGT 2 cut(s) 1198, 1544
Bst6I CTCTTC 7 cut(s) 62, 264, 987, 1922, 2582, 2706, 2850
BstBAI YACGTR 2 cut(s) 177, 1169
BstC8I GCNNGC 5 cut(s) 281, 1220, 1347, 2487, 2502
BstDSI CCRYGG 2 cut(s) 479, 2392
BstF5I GGATG 1 cut(s) 1646
BstKTI GATC 7 cut(s) 841, 1243, 1577, 1672, 1912, 1918, 2302
BstMAI GTCTC 2 cut(s) 338, 2645
BstMBI GATC 7 cut(s) 838, 1240, 1574, 1669, 1909, 1915, 2299
BstMWI GCNNNNNNNGC 9 cut(s) 580, 589, 739, 1812, 1870, 1894, 2186, 2363, 2691
BstNI CCWGG 4 cut(s) 215, 1062, 1271, 1752
BstNSI RCATGY 2 cut(s) 1069, 2213
BstPAI GACNNNNGTC 1 cut(s) 2522
BstSCI CCNGG 4 cut(s) 213, 1060, 1269, 1750
BstSFI CTRYAG 4 cut(s) 1103, 1155, 2233, 2938
BstSLI GKGCMC 1 cut(s) 1704
BstV2I GAAGAC 2 cut(s) 1445, 1827
BstXI CCANNNNNNTGG 2 cut(s) 689, 1691
BstZ17I GTATAC 1 cut(s) 2041
Bsu15I ATCGAT 1 cut(s) 2745
Bsu36I CCTNAGG 1 cut(s) 800
BsuI GTATCC 1 cut(s) 1818
BsuRI GGCC 8 cut(s) 213, 978, 1050, 1554, 1695, 1786, 2189, 2644
BsuTUI ATCGAT 1 cut(s) 2745
BtgI CCRYGG 2 cut(s) 479, 2392
BtsCI GGATG 1 cut(s) 1646
BtsI GCAGTG 1 cut(s) 2711
BtsIMutI CAGTG 6 cut(s) 186, 336, 488, 972, 2192, 2711
Cac8I GCNNGC 5 cut(s) 281, 1220, 1347, 2487, 2502
CaiI CAGNNNCTG 1 cut(s) 373
Cfr10I RCCGGY 1 cut(s) 2644
Cfr13I GGNCC 3 cut(s) 977, 1049, 1265
ClaI ATCGAT 1 cut(s) 2745
CseI GACGC 1 cut(s) 278
Csp6I GTAC 8 cut(s) 357, 407, 1018, 1194, 1853, 1954, 2048, 2275
CviQI GTAC 8 cut(s) 357, 407, 1018, 1194, 1853, 1954, 2048, 2275
DpnI GATC 7 cut(s) 840, 1242, 1576, 1671, 1911, 1917, 2301
DpnII GATC 7 cut(s) 838, 1240, 1574, 1669, 1909, 1915, 2299
EaeI YGGCCR 3 cut(s) 1552, 1693, 2187
Eam1104I CTCTTC 7 cut(s) 62, 264, 987, 1922, 2582, 2706, 2850
EarI CTCTTC 7 cut(s) 62, 264, 987, 1922, 2582, 2706, 2850
Ecl136II GAGCTC 3 cut(s) 94, 850, 2199
Eco130I CCWWGG 5 cut(s) 479, 523, 1770, 2392, 2895
Eco24I GRGCYC 4 cut(s) 96, 852, 1808, 2201
Eco47I GGWCC 1 cut(s) 1265
Eco53kI GAGCTC 3 cut(s) 94, 850, 2199
Eco57I CTGAAG 2 cut(s) 1260, 1380
Eco72I CACGTG 1 cut(s) 177
Eco81I CCTNAGG 1 cut(s) 800
Eco88I CYCGRG 2 cut(s) 1703, 2737
EcoICRI GAGCTC 3 cut(s) 94, 850, 2199
EcoO109I RGGNCCY 1 cut(s) 1265
EcoRI GAATTC 1 cut(s) 388
EcoRII CCWGG 4 cut(s) 213, 1060, 1269, 1750
EcoT14I CCWWGG 5 cut(s) 479, 523, 1770, 2392, 2895
EcoT22I ATGCAT 1 cut(s) 2566
EcoT38I GRGCYC 4 cut(s) 96, 852, 1808, 2201
ErhI CCWWGG 5 cut(s) 479, 523, 1770, 2392, 2895
FalI AAGNNNNNCTT 2 cut(s) 2119, 2151
FaqI GGGAC 2 cut(s) 1184, 1251
FbaI TGATCA 1 cut(s) 1915
FblI GTMKAC 1 cut(s) 2040
FokI GGATG 1 cut(s) 1633
FriOI GRGCYC 4 cut(s) 96, 852, 1808, 2201
FspBI CTAG 7 cut(s) 293, 456, 1532, 1812, 1988, 2433, 2805
GsaI CCCAGC 1 cut(s) 2689
GsuI CTGGAG 3 cut(s) 512, 686, 1869
HaeIII GGCC 8 cut(s) 213, 978, 1050, 1554, 1695, 1786, 2189, 2644
HapII CCGG 6 cut(s) 13, 29, 914, 1490, 2645, 2813
HgaI GACGC 1 cut(s) 278
HincII GTYRAC 1 cut(s) 510
HindII GTYRAC 1 cut(s) 510
HindIII AAGCTT 6 cut(s) 299, 572, 581, 827, 992, 1735
HpaI GTTAAC 1 cut(s) 510
HpaII CCGG 6 cut(s) 13, 29, 914, 1490, 2645, 2813
Hpy166II GTNNAC 6 cut(s) 357, 510, 1396, 2041, 2269, 2734
Hpy8I GTNNAC 6 cut(s) 357, 510, 1396, 2041, 2269, 2734
Hpy99I CGWCG 1 cut(s) 272
HpyAV CCTTC 5 cut(s) 1256, 1673, 1978, 2314, 2894
HpyCH4III ACNGT 2 cut(s) 1198, 1544
HpyCH4IV ACGT 3 cut(s) 176, 1168, 2775
HpyF10VI GCNNNNNNNGC 9 cut(s) 580, 589, 739, 1812, 1870, 1894, 2186, 2363, 2691
HpySE526I ACGT 3 cut(s) 176, 1168, 2775
Kpn2I TCCGGA 1 cut(s) 913
Ksp22I TGATCA 1 cut(s) 1915
KspAI GTTAAC 1 cut(s) 510
Kzo9I GATC 7 cut(s) 838, 1240, 1574, 1669, 1909, 1915, 2299
LmnI GCTCC 7 cut(s) 27, 667, 1215, 1905, 2289, 2557, 2923
LweI GCATC 5 cut(s) 621, 2167, 2740, 2751, 2755
MaeI CTAG 7 cut(s) 293, 456, 1532, 1812, 1988, 2433, 2805
MaeII ACGT 3 cut(s) 176, 1168, 2775
MaeIII GTNAC 6 cut(s) 1164, 1228, 1375, 1707, 2399, 2629
MalI GATC 7 cut(s) 840, 1242, 1576, 1671, 1911, 1917, 2301
MbiI CCGCTC 1 cut(s) 2108
MboI GATC 7 cut(s) 838, 1240, 1574, 1669, 1909, 1915, 2299
MfeI CAATTG 2 cut(s) 431, 1425
MhlI GDGCHC 5 cut(s) 96, 852, 1704, 1808, 2201
MlsI TGGCCA 2 cut(s) 1554, 2189
MluNI TGGCCA 2 cut(s) 1554, 2189
MlyI GAGTC 7 cut(s) 436, 643, 881, 1142, 2096, 2512, 2729
MmeI TCCRAC 1 cut(s) 1186
Mox20I TGGCCA 2 cut(s) 1554, 2189
Mph1103I ATGCAT 1 cut(s) 2566
MroI TCCGGA 1 cut(s) 913
MroXI GAANNNNTTC 2 cut(s) 392, 1112
MscI TGGCCA 2 cut(s) 1554, 2189
MseI TTAA 3 cut(s) 509, 1589, 1728
MslI CAYNNNNRTG 2 cut(s) 2214, 2421
Msp20I TGGCCA 2 cut(s) 1554, 2189
MspA1I CMGCKG 1 cut(s) 2305
MspI CCGG 6 cut(s) 13, 29, 914, 1490, 2645, 2813
MspR9I CCNGG 4 cut(s) 215, 1062, 1271, 1752
MunI CAATTG 2 cut(s) 431, 1425
Mva1269I GAATGC 1 cut(s) 457
MvaI CCWGG 4 cut(s) 215, 1062, 1271, 1752
MwoI GCNNNNNNNGC 9 cut(s) 580, 589, 739, 1812, 1870, 1894, 2186, 2363, 2691
NcoI CCATGG 2 cut(s) 479, 2392
NdeII GATC 7 cut(s) 838, 1240, 1574, 1669, 1909, 1915, 2299
NlaIV GGNNCC 4 cut(s) 23, 1267, 1483, 2811
NmeAIII GCCGAG 1 cut(s) 2206
NmuCI GTSAC 2 cut(s) 2399, 2629
NsiI ATGCAT 1 cut(s) 2566
NspI RCATGY 2 cut(s) 1069, 2213
PaeR7I CTCGAG 1 cut(s) 2737
PctI GAATGC 1 cut(s) 457
PdmI GAANNNNTTC 2 cut(s) 392, 1112
PflMI CCANNNNNTGG 2 cut(s) 1571, 1771
PleI GAGTC 7 cut(s) 435, 643, 880, 1141, 2096, 2512, 2729
PmaCI CACGTG 1 cut(s) 177
PmlI CACGTG 1 cut(s) 177
PpsI GAGTC 7 cut(s) 435, 643, 880, 1141, 2096, 2512, 2729
Ppu21I YACGTR 2 cut(s) 177, 1169
PpuMI RGGWCCY 1 cut(s) 1265
PshAI GACNNNNGTC 1 cut(s) 2522
Psp124BI GAGCTC 3 cut(s) 96, 852, 2201
Psp1406I AACGTT 1 cut(s) 2775
Psp5II RGGWCCY 1 cut(s) 1265
Psp6I CCWGG 4 cut(s) 213, 1060, 1269, 1750
PspCI CACGTG 1 cut(s) 177
PspFI CCCAGC 1 cut(s) 2685
PspGI CCWGG 4 cut(s) 213, 1060, 1269, 1750
PspN4I GGNNCC 4 cut(s) 23, 1267, 1483, 2811
PspPI GGNCC 3 cut(s) 977, 1049, 1265
PspPPI RGGWCCY 1 cut(s) 1265
PspXI VCTCGAGB 1 cut(s) 2737
PstI CTGCAG 2 cut(s) 1107, 2237
PstNI CAGNNNCTG 1 cut(s) 373
PvuII CAGCTG 1 cut(s) 2305
RsaI GTAC 8 cut(s) 358, 408, 1019, 1195, 1854, 1955, 2049, 2276
RsaNI GTAC 8 cut(s) 357, 407, 1018, 1194, 1853, 1954, 2048, 2275
RseI CAYNNNNRTG 2 cut(s) 2214, 2421
SacI GAGCTC 3 cut(s) 96, 852, 2201
SaqAI TTAA 3 cut(s) 509, 1589, 1728
Sau3AI GATC 7 cut(s) 838, 1240, 1574, 1669, 1909, 1915, 2299
Sau96I GGNCC 3 cut(s) 977, 1049, 1265
ScaI AGTACT 2 cut(s) 1854, 2276
SchI GAGTC 7 cut(s) 436, 643, 881, 1142, 2096, 2512, 2729
ScrFI CCNGG 4 cut(s) 215, 1062, 1271, 1752
SduI GDGCHC 5 cut(s) 96, 852, 1704, 1808, 2201
SfaNI GCATC 5 cut(s) 621, 2167, 2740, 2751, 2755
SfcI CTRYAG 4 cut(s) 1103, 1155, 2233, 2938
Sfr274I CTCGAG 1 cut(s) 2737
SinI GGWCC 1 cut(s) 1265
SlaI CTCGAG 1 cut(s) 2737
SmiMI CAYNNNNRTG 2 cut(s) 2214, 2421
SmlI CTYRAG 7 cut(s) 656, 719, 737, 830, 869, 2723, 2737
SmoI CTYRAG 7 cut(s) 656, 719, 737, 830, 869, 2723, 2737
SsiI CCGC 3 cut(s) 1783, 2106, 2802
SspI AATATT 1 cut(s) 2440
SspMI CTAG 7 cut(s) 293, 456, 1532, 1812, 1988, 2433, 2805
SstI GAGCTC 3 cut(s) 96, 852, 2201
StyD4I CCNGG 4 cut(s) 213, 1060, 1269, 1750
StyI CCWWGG 5 cut(s) 479, 523, 1770, 2392, 2895
TaaI ACNGT 2 cut(s) 1198, 1544
TaiI ACGT 3 cut(s) 179, 1171, 2778
TaqI TCGA 6 cut(s) 96, 267, 540, 2125, 2738, 2745
TaqII GACCGA 1 cut(s) 518
TatI WGTACW 5 cut(s) 356, 1017, 1852, 2047, 2274
TauI GCSGC 1 cut(s) 1786
Tru1I TTAA 3 cut(s) 509, 1589, 1728
Tru9I TTAA 3 cut(s) 509, 1589, 1728
TscAI CASTG 6 cut(s) 193, 343, 495, 979, 2199, 2711
TseFI GTSAC 2 cut(s) 2399, 2629
Tsp45I GTSAC 2 cut(s) 2399, 2629
TspDTI ATGAA 8 cut(s) 558, 1265, 1445, 1746, 1926, 1961, 1995, 2327
TspGWI ACGGA 2 cut(s) 342, 1837
TspRI CASTG 6 cut(s) 193, 343, 495, 979, 2199, 2711
Van91I CCANNNNNTGG 2 cut(s) 1571, 1771
VpaK11BI GGWCC 1 cut(s) 1265
XceI RCATGY 2 cut(s) 1069, 2213
XhoI CTCGAG 1 cut(s) 2737
XmiI GTMKAC 1 cut(s) 2040
XmnI GAANNNNTTC 2 cut(s) 392, 1112
XspI CTAG 7 cut(s) 293, 456, 1532, 1812, 1988, 2433, 2805
ZrmI AGTACT 2 cut(s) 1854, 2276
Zsp2I ATGCAT 1 cut(s) 2566
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.