No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G38980 |
| fragaria_vesca | FvH4_2g10380 |
| malus_domestica | MD00G1040100.v1.1 MD10G1063700.v1.1 |
| prunus_persica | Prupe.8G085200_v2.0.a1 Prupe.8G085200_v2.0.a1 Prupe.8G085200_v2.0.a1 Prupe.8G085200_v2.0.a1 |
| pyrus_communis | pycom05g04670 |
| rosa_chinensis | RchiOBHm_Chr6g0267851 |
| rosa_laevigata | RLG00000013977 |
| rosa_multiflora | Rmu_sc0005400.1_g000020 |
| rosa_roxburghii | Rroxscaffold_7G00200440 Rroxscaffold_7G00200450 |
| rosa_rugosa | Rorug06G0034400 Rorug06G0034500 |
| rosa_samantha | Rh6AG156300 Rh6AG156400 Rh6BG157400 Rh6CG158600 Rh6DG142500 Rh6DG142600 |
| rosa_wichuraiana | Rw6G013430 Rw6G013570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 77 |
| AcuI | CTGAAG | 1 cut(s) | 138 |
| AhlI | ACTAGT | 1 cut(s) | 109 |
| AluBI | AGCT | 2 cut(s) | 11, 104 |
| AluI | AGCT | 2 cut(s) | 11, 104 |
| Alw26I | GTCTC | 1 cut(s) | 18 |
| ApeKI | GCWGC | 1 cut(s) | 104 |
| BbvI | GCAGC | 1 cut(s) | 91 |
| BcoDI | GTCTC | 1 cut(s) | 18 |
| BcuI | ACTAGT | 1 cut(s) | 109 |
| BfaI | CTAG | 2 cut(s) | 110, 199 |
| BglII | AGATCT | 1 cut(s) | 195 |
| BisI | GCNGC | 1 cut(s) | 105 |
| BlsI | GCNGC | 1 cut(s) | 106 |
| BmsI | GCATC | 1 cut(s) | 84 |
| BpmI | CTGGAG | 1 cut(s) | 42 |
| BpuEI | CTTGAG | 1 cut(s) | 56 |
| BsaBI | GATNNNNATC | 1 cut(s) | 129 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 15, 45 |
| Bse1I | ACTGG | 1 cut(s) | 25 |
| Bse8I | GATNNNNATC | 1 cut(s) | 129 |
| BseGI | GGATG | 1 cut(s) | 130 |
| BseJI | GATNNNNATC | 1 cut(s) | 129 |
| BseMII | CTCAG | 1 cut(s) | 95 |
| BseNI | ACTGG | 1 cut(s) | 25 |
| BseXI | GCAGC | 1 cut(s) | 91 |
| BsgI | GTGCAG | 1 cut(s) | 90 |
| BsmAI | GTCTC | 1 cut(s) | 18 |
| BsmBI | CGTCTC | 1 cut(s) | 18 |
| Bsp143I | GATC | 1 cut(s) | 195 |
| BspCNI | CTCAG | 1 cut(s) | 94 |
| BspQI | GCTCTTC | 1 cut(s) | 154 |
| BsrI | ACTGG | 1 cut(s) | 25 |
| BssMI | GATC | 1 cut(s) | 195 |
| Bst6I | CTCTTC | 1 cut(s) | 154 |
| BstDEI | CTNAG | 1 cut(s) | 81 |
| BstF5I | GGATG | 1 cut(s) | 130 |
| BstKTI | GATC | 1 cut(s) | 198 |
| BstMAI | GTCTC | 1 cut(s) | 18 |
| BstMBI | GATC | 1 cut(s) | 195 |
| BstV1I | GCAGC | 1 cut(s) | 91 |
| BstX2I | RGATCY | 1 cut(s) | 195 |
| BstYI | RGATCY | 1 cut(s) | 195 |
| BtsCI | GGATG | 1 cut(s) | 130 |
| BtsIMutI | CAGTG | 1 cut(s) | 18 |
| CviJI | RGCY | 3 cut(s) | 11, 104, 147 |
| CviKI_1 | RGCY | 3 cut(s) | 11, 104, 147 |
| DdeI | CTNAG | 1 cut(s) | 81 |
| DpnI | GATC | 1 cut(s) | 197 |
| DpnII | GATC | 1 cut(s) | 195 |
| Eam1104I | CTCTTC | 1 cut(s) | 154 |
| EarI | CTCTTC | 1 cut(s) | 154 |
| Eco57I | CTGAAG | 1 cut(s) | 138 |
| Esp3I | CGTCTC | 1 cut(s) | 18 |
| FaiI | YATR | 2 cut(s) | 14, 35 |
| FblI | GTMKAC | 1 cut(s) | 77 |
| Fnu4HI | GCNGC | 1 cut(s) | 105 |
| FokI | GGATG | 1 cut(s) | 117 |
| Fsp4HI | GCNGC | 1 cut(s) | 105 |
| FspBI | CTAG | 2 cut(s) | 110, 199 |
| GluI | GCNGC | 1 cut(s) | 105 |
| GsuI | CTGGAG | 1 cut(s) | 42 |
| HinfI | GANTC | 3 cut(s) | 65, 125, 137 |
| Hpy166II | GTNNAC | 1 cut(s) | 78 |
| Hpy188I | TCNGA | 1 cut(s) | 84 |
| Hpy188III | TCNNGA | 1 cut(s) | 134 |
| Hpy8I | GTNNAC | 1 cut(s) | 78 |
| HpyAV | CCTTC | 1 cut(s) | 60 |
| HpyCH4V | TGCA | 1 cut(s) | 107 |
| HpyF3I | CTNAG | 1 cut(s) | 81 |
| Kzo9I | GATC | 1 cut(s) | 195 |
| LguI | GCTCTTC | 1 cut(s) | 154 |
| LpnPI | CCDG | 3 cut(s) | 6, 141, 147 |
| Lsp1109I | GCAGC | 1 cut(s) | 91 |
| LweI | GCATC | 1 cut(s) | 84 |
| MaeI | CTAG | 2 cut(s) | 110, 199 |
| MalI | GATC | 1 cut(s) | 197 |
| MboI | GATC | 1 cut(s) | 195 |
| MboII | GAAGA | 2 cut(s) | 141, 144 |
| MflI | RGATCY | 1 cut(s) | 195 |
| MluCI | AATT | 1 cut(s) | 170 |
| MnlI | CCTC | 2 cut(s) | 80, 131 |
| MseI | TTAA | 1 cut(s) | 60 |
| NdeII | GATC | 1 cut(s) | 195 |
| NmeAIII | GCCGAG | 1 cut(s) | 123 |
| PciSI | GCTCTTC | 1 cut(s) | 154 |
| PfeI | GAWTC | 3 cut(s) | 65, 125, 137 |
| PkrI | GCNGC | 1 cut(s) | 106 |
| PsuI | RGATCY | 1 cut(s) | 195 |
| SapI | GCTCTTC | 1 cut(s) | 154 |
| SaqAI | TTAA | 1 cut(s) | 60 |
| SatI | GCNGC | 1 cut(s) | 105 |
| Sau3AI | GATC | 1 cut(s) | 195 |
| SetI | ASST | 2 cut(s) | 13, 106 |
| SfaNI | GCATC | 1 cut(s) | 84 |
| SgeI | CNNG | 9 cut(s) | 33, 85, 103, 122, 134, 146, 155, 168, 188 |
| SmlI | CTYRAG | 1 cut(s) | 71 |
| SmoI | CTYRAG | 1 cut(s) | 71 |
| SpeI | ACTAGT | 1 cut(s) | 109 |
| Sse9I | AATT | 1 cut(s) | 170 |
| SspMI | CTAG | 2 cut(s) | 110, 199 |
| TaqI | TCGA | 1 cut(s) | 123 |
| TasI | AATT | 1 cut(s) | 170 |
| TfiI | GAWTC | 3 cut(s) | 65, 125, 137 |
| Tru1I | TTAA | 1 cut(s) | 60 |
| Tru9I | TTAA | 1 cut(s) | 60 |
| TscAI | CASTG | 1 cut(s) | 25 |
| TseI | GCWGC | 1 cut(s) | 104 |
| TspDTI | ATGAA | 1 cut(s) | 183 |
| TspRI | CASTG | 1 cut(s) | 25 |
| XmiI | GTMKAC | 1 cut(s) | 77 |
| XspI | CTAG | 2 cut(s) | 110, 199 |