Rh6AG244400

Isocitrate dehydrogenase NAD regulatory subunit 1

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Reverse (-)
43331828 .. 43335289
3462 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG244400.1

Sequence Viewer

Length: 786 bp
ATGGCCCGTCGAGCCCTCCCCATCCTCAAGCAGTTCTCTCACCGCCCCACACTCGGATCCTTCCTCCCCAAACCCGACCCGAACACCCGATCGGTCACTTACATGCCCCGACCCGGCGACGGAACCCCGCGCTGCGTCACTCTCATCCCCGGCGACGGGATCGGGCCGCTCGTCACCAACGCCGTCGAGCAAGTCATGGAGGCGATGCACGCGCCGGTGTTCTTCGAGCGCTACGACGTCCACGGCGACATGAGCCGCGTGCCGCCGGAGGTGATGGACTCGATCCGGAAGAACAAGGTCTGCATAAAGGGCGGGCTTAAGACGCCGGTCGGCGGCGGTGTGAGCTCGCTCAATATGCAGCTGAGGAAGGAGCTTGATTTGTACGCGTCGCTGGTCAATTGCTTCAACCTCCCTGGACTCCCCACGCGCCACGAGAACGTGGACATTGTGGTGATCAGAGAGAACACCGAGGGTGAGTACGCCGGCCTCGAGCACGAAGTCGTTCCCGGAGTCGTGGAGAGCCTCAAGGTGATCACAAAGTTCTGCTCAGAACGCATAGCCAAGTATGCGTTTGAGTATGCATACTTGAATAACAGAAAGAAAGTGACTGCCGTGCACAAAGCCAACATCATGAAGCTTGCGGATGGTTTGTTCTTGGAGTCTTGCCGGGAGGTTGCGACAAAGTATCCCAGTATCAAGTATAATGAGATTATCGTGGACAATTGCTGTATGCAACTTGTTTCAAAGCCTGAACAGTTTGATGTGATGGTATGCGAGCGCAATTAG

Protein Analysis

261

Amino Acids

29.18

Weight (kDa)

8.36

Isoelectric Point (pI)

42.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Iso_dh PF00180 46 - 259 2.5e-51 Isocitrate/isopropylmalate dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 240
AccBSI CCGCTC 1 cut(s) 169
AccII CGCG 5 cut(s) 130, 212, 258, 386, 427
AccIII TCCGGA 1 cut(s) 285
AciI CCGC 9 cut(s) 43, 128, 167, 256, 263, 312, 333, 336, 641
AclWI GGATC 4 cut(s) 51, 64, 167, 277
AcyI GRCGYC 2 cut(s) 237, 323
AfaI GTAC 2 cut(s) 383, 479
AfeI AGCGCT 1 cut(s) 230
AfiI CCNNNNNNNGG 6 cut(s) 53, 113, 119, 155, 156, 332
AflII CTTAAG 1 cut(s) 317
AflIII ACRYGT 1 cut(s) 384
AgsI TTSAA 3 cut(s) 406, 589, 744
AjnI CCWGG 1 cut(s) 412
AloI GAACNNNNNNTCC 2 cut(s) 635, 667
AluBI AGCT 4 cut(s) 345, 361, 373, 637
AluI AGCT 4 cut(s) 345, 361, 373, 637
Alw21I GWGCWC 3 cut(s) 347, 495, 618
Alw44I GTGCAC 1 cut(s) 614
AlwI GGATC 4 cut(s) 51, 64, 167, 277
Ama87I CYCGRG 1 cut(s) 488
Aor13HI TCCGGA 1 cut(s) 285
Aor51HI AGCGCT 1 cut(s) 230
AoxI GGCC 3 cut(s) 3, 164, 484
ApaLI GTGCAC 1 cut(s) 614
ApeKI GCWGC 2 cut(s) 132, 358
Asp700I GAANNNNTTC 1 cut(s) 501
AspLEI GCGC 5 cut(s) 132, 214, 231, 429, 780
AspS9I GGNCC 2 cut(s) 4, 164
AsuC2I CCSGG 4 cut(s) 114, 150, 507, 668
AsuHPI GGTGA 6 cut(s) 32, 166, 283, 463, 485, 541
AvaI CYCGRG 1 cut(s) 488
BaeGI GKGCMC 1 cut(s) 618
BamHI GGATCC 1 cut(s) 56
BanII GRGCYC 2 cut(s) 16, 347
BauI CACGAG 1 cut(s) 431
Bbv12I GWGCWC 3 cut(s) 347, 495, 618
BbvCI CCTCAGC 1 cut(s) 362
BbvI GCAGC 2 cut(s) 119, 370
BccI CCATC 4 cut(s) 29, 268, 638, 760
BceAI ACGGC 3 cut(s) 167, 259, 596
BciT130I CCWGG 1 cut(s) 414
BciVI GTATCC 1 cut(s) 696
BclI TGATCA 2 cut(s) 453, 531
BcnI CCSGG 4 cut(s) 114, 150, 507, 668
BfoI RGCGCY 1 cut(s) 232
BfrI CTTAAG 1 cut(s) 317
BfuI GTATCC 1 cut(s) 696
BisI GCNGC 6 cut(s) 133, 167, 256, 263, 334, 359
BlsI GCNGC 6 cut(s) 134, 168, 257, 264, 335, 360
Bme1390I CCNGG 5 cut(s) 114, 150, 414, 507, 668
BmeT110I CYCGRG 1 cut(s) 488
BmgT120I GGNCC 2 cut(s) 4, 164
BmiI GGNNCC 2 cut(s) 58, 124
BmrFI CCNGG 5 cut(s) 114, 150, 414, 507, 668
BmrI ACTGGG 1 cut(s) 684
BmsI GCATC 1 cut(s) 195
BmuI ACTGGG 1 cut(s) 684
BoxI GACNNNNGTC 1 cut(s) 326
Bpu10I CCTNAGC 1 cut(s) 362
BpuEI CTTGAG 2 cut(s) 11, 509
BpuMI CCSGG 4 cut(s) 114, 150, 507, 668
BsaHI GRCGYC 2 cut(s) 237, 323
BsaJI CCNNGG 4 cut(s) 148, 241, 412, 468
BsaWI WCCGGW 1 cut(s) 285
Bsc4I CCNNNNNNNGG 6 cut(s) 53, 113, 119, 155, 156, 332
Bse118I RCCGGY 3 cut(s) 214, 325, 482
Bse1I ACTGG 1 cut(s) 690
BseAI TCCGGA 1 cut(s) 285
BseBI CCWGG 1 cut(s) 414
BseDI CCNNGG 4 cut(s) 148, 241, 412, 468
BseGI GGATG 3 cut(s) 21, 144, 649
BseLI CCNNNNNNNGG 6 cut(s) 53, 113, 119, 155, 156, 332
BseMII CTCAG 2 cut(s) 353, 561
BseNI ACTGG 1 cut(s) 690
BseSI GKGCMC 1 cut(s) 618
BseXI GCAGC 2 cut(s) 119, 370
Bsh1236I CGCG 5 cut(s) 130, 212, 258, 386, 427
Bsh1285I CGRYCG 2 cut(s) 92, 330
BshFI GGCC 3 cut(s) 5, 166, 486
BsiEI CGRYCG 2 cut(s) 92, 330
BsiHKAI GWGCWC 3 cut(s) 347, 495, 618
BsiHKCI CYCGRG 1 cut(s) 488
BsiSI CCGG 9 cut(s) 114, 150, 215, 266, 286, 326, 483, 507, 667
BslI CCNNNNNNNGG 6 cut(s) 53, 113, 119, 155, 156, 332
BsnI GGCC 3 cut(s) 5, 166, 486
BsoBI CYCGRG 1 cut(s) 488
Bsp1286I GDGCHC 4 cut(s) 16, 347, 495, 618
Bsp13I TCCGGA 1 cut(s) 285
Bsp143I GATC 6 cut(s) 56, 89, 159, 282, 453, 531
BspACI CCGC 9 cut(s) 43, 128, 167, 256, 263, 312, 333, 336, 641
BspANI GGCC 3 cut(s) 5, 166, 486
BspCNI CTCAG 2 cut(s) 354, 560
BspEI TCCGGA 1 cut(s) 285
BspFNI CGCG 5 cut(s) 130, 212, 258, 386, 427
BspHI TCATGA 1 cut(s) 630
BspLI GGNNCC 2 cut(s) 58, 124
BspPI GGATC 4 cut(s) 51, 64, 167, 277
BspTI CTTAAG 1 cut(s) 317
BsrBI CCGCTC 1 cut(s) 169
BsrFI RCCGGY 3 cut(s) 214, 325, 482
BsrI ACTGG 1 cut(s) 690
BssAI RCCGGY 3 cut(s) 214, 325, 482
BssECI CCNNGG 4 cut(s) 148, 241, 412, 468
BssMI GATC 6 cut(s) 56, 89, 159, 282, 453, 531
BssNI GRCGYC 2 cut(s) 237, 323
BssSI CACGAG 1 cut(s) 431
Bst2BI CACGAG 1 cut(s) 431
Bst2UI CCWGG 1 cut(s) 414
Bst4CI ACNGT 1 cut(s) 756
BstACI GRCGYC 2 cut(s) 237, 323
BstAFI CTTAAG 1 cut(s) 317
BstC8I GCNNGC 7 cut(s) 210, 260, 314, 347, 484, 639, 776
BstDEI CTNAG 2 cut(s) 362, 547
BstDSI CCRYGG 1 cut(s) 241
BstF5I GGATG 3 cut(s) 21, 144, 649
BstFNI CGCG 5 cut(s) 130, 212, 258, 386, 427
BstH2I RGCGCY 1 cut(s) 232
BstHHI GCGC 5 cut(s) 132, 214, 231, 429, 780
BstKTI GATC 6 cut(s) 59, 92, 162, 285, 456, 534
BstMBI GATC 6 cut(s) 56, 89, 159, 282, 453, 531
BstMCI CGRYCG 2 cut(s) 92, 330
BstMWI GCNNNNNNNGC 9 cut(s) 11, 209, 252, 309, 322, 342, 355, 552, 566
BstNI CCWGG 1 cut(s) 414
BstNSI RCATGY 1 cut(s) 106
BstPAI GACNNNNGTC 1 cut(s) 326
BstSCI CCNGG 5 cut(s) 112, 148, 412, 505, 666
BstSLI GKGCMC 1 cut(s) 618
BstUI CGCG 5 cut(s) 130, 212, 258, 386, 427
BstV1I GCAGC 2 cut(s) 119, 370
BstX2I RGATCY 1 cut(s) 56
BstYI RGATCY 1 cut(s) 56
BsuI GTATCC 1 cut(s) 696
BsuRI GGCC 3 cut(s) 5, 166, 486
BtgI CCRYGG 1 cut(s) 241
BtgZI GCGATG 1 cut(s) 218
BtsCI GGATG 3 cut(s) 21, 144, 649
Cac8I GCNNGC 7 cut(s) 210, 260, 314, 347, 484, 639, 776
CciI TCATGA 1 cut(s) 630
CfoI GCGC 5 cut(s) 132, 214, 231, 429, 780
Cfr10I RCCGGY 3 cut(s) 214, 325, 482
Cfr13I GGNCC 2 cut(s) 4, 164
CseI GACGC 3 cut(s) 124, 331, 375
Csp6I GTAC 2 cut(s) 382, 478
CviAII CATG 4 cut(s) 103, 196, 250, 631
CviQI GTAC 2 cut(s) 382, 478
DdeI CTNAG 2 cut(s) 362, 547
DpnI GATC 6 cut(s) 58, 91, 161, 284, 455, 533
DpnII GATC 6 cut(s) 56, 89, 159, 282, 453, 531
Ecl136II GAGCTC 1 cut(s) 345
Eco24I GRGCYC 2 cut(s) 16, 347
Eco47III AGCGCT 1 cut(s) 230
Eco53kI GAGCTC 1 cut(s) 345
Eco88I CYCGRG 1 cut(s) 488
EcoICRI GAGCTC 1 cut(s) 345
EcoRII CCWGG 1 cut(s) 412
EcoT22I ATGCAT 1 cut(s) 583
EcoT38I GRGCYC 2 cut(s) 16, 347
FaeI CATG 4 cut(s) 106, 199, 253, 634
FatI CATG 4 cut(s) 102, 195, 249, 630
FauI CCCGC 2 cut(s) 135, 305
FbaI TGATCA 2 cut(s) 453, 531
Fnu4HI GCNGC 6 cut(s) 133, 167, 256, 263, 334, 359
FokI GGATG 3 cut(s) 8, 131, 656
FriOI GRGCYC 2 cut(s) 16, 347
Fsp4HI GCNGC 6 cut(s) 133, 167, 256, 263, 334, 359
GlaI GCGC 5 cut(s) 131, 213, 230, 428, 779
GluI GCNGC 6 cut(s) 133, 167, 256, 263, 334, 359
HaeII RGCGCY 1 cut(s) 232
HaeIII GGCC 3 cut(s) 5, 166, 486
HapII CCGG 9 cut(s) 114, 150, 215, 266, 286, 326, 483, 507, 667
HgaI GACGC 3 cut(s) 124, 331, 375
HhaI GCGC 5 cut(s) 132, 214, 231, 429, 780
Hin1I GRCGYC 2 cut(s) 237, 323
Hin1II CATG 4 cut(s) 106, 199, 253, 634
Hin6I GCGC 5 cut(s) 130, 212, 229, 427, 778
HinP1I GCGC 5 cut(s) 130, 212, 229, 427, 778
HindIII AAGCTT 1 cut(s) 635
HinfI GANTC 4 cut(s) 278, 417, 510, 659
HpaII CCGG 9 cut(s) 114, 150, 215, 266, 286, 326, 483, 507, 667
HphI GGTGA 6 cut(s) 32, 166, 283, 463, 485, 541
Hpy166II GTNNAC 4 cut(s) 241, 442, 616, 718
Hpy188I TCNGA 3 cut(s) 56, 458, 550
Hpy188III TCNNGA 2 cut(s) 286, 631
Hpy8I GTNNAC 4 cut(s) 241, 442, 616, 718
Hpy99I CGWCG 6 cut(s) 12, 122, 158, 188, 239, 391
HpyAV CCTTC 2 cut(s) 70, 361
HpyCH4III ACNGT 1 cut(s) 756
HpyCH4IV ACGT 2 cut(s) 237, 438
HpyCH4V TGCA 6 cut(s) 208, 303, 358, 581, 616, 733
HpyF10VI GCNNNNNNNGC 9 cut(s) 11, 209, 252, 309, 322, 342, 355, 552, 566
HpyF3I CTNAG 2 cut(s) 362, 547
HpySE526I ACGT 2 cut(s) 237, 438
Hsp92I GRCGYC 2 cut(s) 237, 323
Hsp92II CATG 4 cut(s) 106, 199, 253, 634
HspAI GCGC 5 cut(s) 130, 212, 229, 427, 778
Kpn2I TCCGGA 1 cut(s) 285
KroI GCCGGC 1 cut(s) 482
KroNI GCCGGC 1 cut(s) 484
Ksp22I TGATCA 2 cut(s) 453, 531
Kzo9I GATC 6 cut(s) 56, 89, 159, 282, 453, 531
LmnI GCTCC 1 cut(s) 370
Lsp1109I GCAGC 2 cut(s) 119, 370
LweI GCATC 1 cut(s) 195
MaeII ACGT 2 cut(s) 237, 438
MaeIII GTNAC 4 cut(s) 94, 136, 172, 604
MalI GATC 6 cut(s) 58, 91, 161, 284, 455, 533
MbiI CCGCTC 1 cut(s) 169
MboI GATC 6 cut(s) 56, 89, 159, 282, 453, 531
MboII GAAGA 2 cut(s) 214, 301
MfeI CAATTG 2 cut(s) 397, 721
MflI RGATCY 1 cut(s) 56
MhlI GDGCHC 4 cut(s) 16, 347, 495, 618
MluCI AATT 3 cut(s) 397, 721, 781
MluI ACGCGT 1 cut(s) 384
MlyI GAGTC 4 cut(s) 272, 411, 519, 668
Mph1103I ATGCAT 1 cut(s) 583
MroI TCCGGA 1 cut(s) 285
MroNI GCCGGC 1 cut(s) 482
MroXI GAANNNNTTC 1 cut(s) 501
MseI TTAA 1 cut(s) 318
MslI CAYNNNNRTG 2 cut(s) 101, 449
MspA1I CMGCKG 1 cut(s) 361
MspCI CTTAAG 1 cut(s) 317
MspI CCGG 9 cut(s) 114, 150, 215, 266, 286, 326, 483, 507, 667
MspR9I CCNGG 5 cut(s) 114, 150, 414, 507, 668
MunI CAATTG 2 cut(s) 397, 721
MvaI CCWGG 1 cut(s) 414
MvnI CGCG 5 cut(s) 130, 212, 258, 386, 427
MwoI GCNNNNNNNGC 9 cut(s) 11, 209, 252, 309, 322, 342, 355, 552, 566
NaeI GCCGGC 1 cut(s) 484
NciI CCSGG 4 cut(s) 114, 150, 507, 668
NdeII GATC 6 cut(s) 56, 89, 159, 282, 453, 531
NgoMIV GCCGGC 1 cut(s) 482
NlaIII CATG 4 cut(s) 106, 199, 253, 634
NlaIV GGNNCC 2 cut(s) 58, 124
NmuCI GTSAC 4 cut(s) 94, 136, 172, 604
NsiI ATGCAT 1 cut(s) 583
NspI RCATGY 1 cut(s) 106
PaeR7I CTCGAG 1 cut(s) 488
PagI TCATGA 1 cut(s) 630
PcsI WCGNNNNNNNCGW 4 cut(s) 168, 231, 243, 486
PdiI GCCGGC 1 cut(s) 484
PdmI GAANNNNTTC 1 cut(s) 501
PfoI TCCNGGA 1 cut(s) 505
PkrI GCNGC 6 cut(s) 134, 168, 257, 264, 335, 360
Ple19I CGATCG 1 cut(s) 92
PleI GAGTC 4 cut(s) 272, 411, 518, 667
PpsI GAGTC 4 cut(s) 272, 411, 518, 667
PshAI GACNNNNGTC 1 cut(s) 326
Psp124BI GAGCTC 1 cut(s) 347
Psp6I CCWGG 1 cut(s) 412
PspGI CCWGG 1 cut(s) 412
PspN4I GGNNCC 2 cut(s) 58, 124
PspPI GGNCC 2 cut(s) 4, 164
PspXI VCTCGAGB 1 cut(s) 488
PsuI RGATCY 1 cut(s) 56
PvuI CGATCG 1 cut(s) 92
PvuII CAGCTG 1 cut(s) 361
RsaI GTAC 2 cut(s) 383, 479
RsaNI GTAC 2 cut(s) 382, 478
RseI CAYNNNNRTG 2 cut(s) 101, 449
SacI GAGCTC 1 cut(s) 347
SaqAI TTAA 1 cut(s) 318
SatI GCNGC 6 cut(s) 133, 167, 256, 263, 334, 359
Sau3AI GATC 6 cut(s) 56, 89, 159, 282, 453, 531
Sau96I GGNCC 2 cut(s) 4, 164
SchI GAGTC 4 cut(s) 272, 411, 519, 668
ScrFI CCNGG 5 cut(s) 114, 150, 414, 507, 668
SduI GDGCHC 4 cut(s) 16, 347, 495, 618
SfaNI GCATC 1 cut(s) 195
Sfr274I CTCGAG 1 cut(s) 488
SgrAI CRCCGGYG 1 cut(s) 214
SlaI CTCGAG 1 cut(s) 488
SmiMI CAYNNNNRTG 2 cut(s) 101, 449
SmlI CTYRAG 4 cut(s) 26, 317, 488, 524
SmoI CTYRAG 4 cut(s) 26, 317, 488, 524
Sse9I AATT 3 cut(s) 397, 721, 781
SsiI CCGC 9 cut(s) 43, 128, 167, 256, 263, 312, 333, 336, 641
SstI GAGCTC 1 cut(s) 347
StyD4I CCNGG 5 cut(s) 112, 148, 412, 505, 666
TaaI ACNGT 1 cut(s) 756
TaiI ACGT 2 cut(s) 240, 441
TaqI TCGA 5 cut(s) 10, 186, 225, 281, 489
TaqII GACCGA 1 cut(s) 82
TasI AATT 3 cut(s) 397, 721, 781
TauI GCSGC 4 cut(s) 169, 258, 265, 336
Tru1I TTAA 1 cut(s) 318
Tru9I TTAA 1 cut(s) 318
TseFI GTSAC 4 cut(s) 94, 136, 172, 604
TseI GCWGC 2 cut(s) 132, 358
Tsp45I GTSAC 4 cut(s) 94, 136, 172, 604
TspDTI ATGAA 1 cut(s) 647
TspGWI ACGGA 1 cut(s) 135
Vha464I CTTAAG 1 cut(s) 317
VneI GTGCAC 1 cut(s) 614
XceI RCATGY 1 cut(s) 106
XhoI CTCGAG 1 cut(s) 488
XmnI GAANNNNTTC 1 cut(s) 501
ZraI GACGTC 1 cut(s) 238
Zsp2I ATGCAT 1 cut(s) 583
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.