Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0003894

Physical Location & Seq

Genomic Coordinates Forward (+)

18654747 .. 18657573

Gene Structure 2827 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0132000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1458 bp

ATGAGGGAGAAGGTTGATACTTGTTCTCCCGTTGGAGTTCTTGAGGACTTCTTTAGGAGCTCAGATTCTGAAAGCTCTACCAAGGAGCCCAATCTGGACTTTGAAATCACCCAAAAATCAAAGGCAAATTCCAGGTGGAATGGACTTGTTCAATTGCTGAGAACAAAATCCAAGAGGTCTTTGGCCTCAATGCATCCTCTGTTGAAACTCTCAAAGAAAATGAGCAGTAGTATGAGGGAGATTATAACGCCAAAACTCGAGTCAGATTCCGAATACCCTTTCAAGTCACCATGGAAGAACTTCTCCCTTCATGAGCTCCAAGCTGCAACAAAGAATTTCAGCCAAGAAAATATGATCGGAAAAGGGGGTTATGCTGAAGTTTACAAGGGTTGTTTAGCAAATGGGCAATTTGTGGCAATCAAACGGCTAACCAGGGGAACGCCGGAGGAGATCACCGGCGACTTTTTATCGGAGATTGGAATCATGGGACATGTGAATCATCCTAATACTGCAAAGTTGATTGGATATGGAGTTGAAGGAGGGATGCACTTGGTTCTTGAATTGTCTCCACAAGGAAGCTTAGCTTCTGTGCTTTATGGTTCAAAGGTGAAGCTTAAGTGGGAGGTCAGGTACAAAATTGCATTAGGTGCAGCTAAGGGTTTACAGTATCTTCATGAGGGTTGTCAGAGGAGGATTATCCACAGAGATATTAAGGCTGCAAATATTTTGCTCACTGAGGAATTCGAGGCCAAGATCTGTGACTTTGGTCTTGCAAAATGGCTGCCAGAGAGTTGGACTCACCACACCATTTCAAAATTTGAAGGCACATTCGGCTACCTTGCTCCTGAGTTCCTATTGCACGGTATAGTAGATGAGAAAACTGATGTTTTTGCCTTTGGTGTGCTGCTGTTGGAACTAGTCACGGGGCGCCGAGCTCTAGATTACTCCCAACAAAGCCTTGTTTTGTGGGCAAAGCCCTTGCTGAAGAAGAATGAAATCAAAGGCTTGGTTGATCCTTCCCTAGCCAACGACTACAACCCTCTACAGATGAATCTCGTTTTGTTGGCTGCTTCGTTGTGCATACAACGATCCTCAATACGACGGCCTAGTATGAATCAGGCCCGATCAAGAGAGGACGTCTGCACTTTCGCTAAAGTGAGGACGACGGCGCTGCAGCCCAGCTCAGGCCTCGACGGCGGCGCGAATCGGGCCGGATGGAGGCCGGAAGCATCCCAGCCGGCTTCTGGACAGCGATCGAGGTCGGAGGAGGTCGAGGTTGCAGGTTTCTGGGCAGCAACCTCACCTGCAACTGCAACCTCACCTGCAGCGCTGCAACCTCGTCGCCGGAGACTCCACCCGACTACAGACTGGTCCGTCCGACCCCTGGCCTCCCTCCGGCAACTGGCGCCCCACCGTAGTGGCCTGAGTTGGGCTGCAGCGCCGTCATCCGTACTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006091 GO:0006099 GO:0006101 GO:0006102 GO:0008150 GO:0008152 GO:0008270 GO:0009060 GO:0009987 GO:0015980 GO:0016999 GO:0017144 GO:0019752 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045333 GO:0046872 GO:0046914 GO:0055114 GO:0071704 GO:0072350

KEGG Pathways

Metabolic & Signaling

ko00020 ko01100 ko01110 ko01120 ko01130 ko01200 ko01210 ko01230 map00020 map01100 map01110 map01120 map01130 map01200 map01210 map01230

Pfam Domains

Protein Families

Iso_dh

Protein Analysis

485

Amino Acids

53.74

Weight (kDa)

9.46

Isoelectric Point (pI)

56.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	114 - 320	4.8e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	115 - 313	9.5e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003894)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G38370
fragaria_vesca	FvH4_2g16540 FvH4_7g04340
malus_domestica	MD05G1133800.v1.1 MD10G1138800.v1.1
prunus_persica	Prupe.8G177600_v2.0.a1 Prupe.8G177600_v2.0.a1
pyrus_communis	pycom05g13060 pycom10g11800
rosa_chinensis	RchiOBHm_Chr1g0329291 RchiOBHm_Chr6g0280561
rosa_laevigata	RLG00000013054 RLG00000029903
rosa_multiflora	Rmu_co8146946.1_g000001 Rmu_co8448883.1_g000001 Rmu_sc0015818.1_g000007
rosa_roxburghii	Rroxscaffold_4G00321230 Rroxscaffold_7G00187990
rosa_rugosa	Rorug06G0132000 Rorug06G0132000 Rorug06G0132100 Rorug06G0132200 Rorug06G0132300 Rorug06G0132400.1
rosa_samantha	Rh1AG096800 Rh1BG077400 Rh1CG093600 Rh1CG093700 Rh6AG244600 Rh6BG247000 Rh6CG248600 Rh6DG239800
rosa_wichuraiana	Rw1G007540 Rw6G021180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	245
AarI	CACCTGC	2 cut(s)	1312, 1330
AasI	GACNNNNNNGTC	1 cut(s)	1373
AatII	GACGTC	1 cut(s)	1140
Acc36I	ACCTGC	3 cut(s)	1271, 1312, 1330
AccB1I	GGYRCC	2 cut(s)	927, 1405
AccII	CGCG	1 cut(s)	1202
AciI	CCGC	1 cut(s)	1197
AclWI	GGATC	2 cut(s)	1007, 1083
AcsI	RAATTY	4 cut(s)	127, 334, 740, 815
AcuI	CTGAAG	2 cut(s)	396, 1004
AcyI	GRCGYC	3 cut(s)	928, 1137, 1406
AfaI	GTAC	2 cut(s)	632, 1452
AfeI	AGCGCT	1 cut(s)	1329
AfiI	CCNNNNNNNGG	7 cut(s)	1184, 1218, 1244, 1384, 1395, 1402, 1429
AflII	CTTAAG	1 cut(s)	614
AflIII	ACRYGT	1 cut(s)	490
AgsI	TTSAA	9 cut(s)	104, 152, 205, 283, 536, 560, 603, 813, 821
AhlI	ACTAGT	1 cut(s)	916
AjnI	CCWGG	3 cut(s)	131, 431, 1383
AleI	CACNNNNGTG	1 cut(s)	1416
Alw21I	GWGCWC	3 cut(s)	62, 318, 937
Alw26I	GTCTC	2 cut(s)	570, 1342
AlwI	GGATC	2 cut(s)	1007, 1083
AlwNI	CAGNNNCTG	1 cut(s)	68
Ama87I	CYCGRG	1 cut(s)	257
Aor51HI	AGCGCT	1 cut(s)	1329
AoxI	GGCC	9 cut(s)	183, 747, 1103, 1119, 1186, 1209, 1220, 1386, 1420
ApoI	RAATTY	4 cut(s)	127, 334, 740, 815
ArsI	GACNNNNNNTTYG	2 cut(s)	245, 277
Asp700I	GAANNNNTTC	1 cut(s)	299
AspLEI	GCGC	6 cut(s)	930, 1171, 1202, 1330, 1408, 1441
AspS9I	GGNCC	3 cut(s)	1120, 1209, 1371
AsuHPI	GGTGA	7 cut(s)	100, 279, 445, 619, 791, 1293, 1311
AvaI	CYCGRG	1 cut(s)	257
AvaII	GGWCC	1 cut(s)	1371
BanI	GGYRCC	2 cut(s)	927, 1405
BanII	GRGCYC	4 cut(s)	62, 90, 318, 937
Bbv12I	GWGCWC	3 cut(s)	62, 318, 937
BccI	CCATC	1 cut(s)	1209
BceAI	ACGGC	5 cut(s)	440, 1118, 1182, 1210, 1426
BcgI	CGANNNNNNTGC	4 cut(s)	1153, 1187, 1322, 1356
BciT130I	CCWGG	3 cut(s)	133, 433, 1385
BcoDI	GTCTC	2 cut(s)	570, 1342
BcuI	ACTAGT	1 cut(s)	916
BfaI	CTAG	4 cut(s)	917, 938, 1022, 1107
BfmI	CTRYAG	5 cut(s)	1043, 1172, 1323, 1362, 1434
BfoI	RGCGCY	5 cut(s)	931, 1172, 1331, 1409, 1442
BfrI	CTTAAG	1 cut(s)	614
BfuAI	ACCTGC	3 cut(s)	1271, 1312, 1330
BglI	GCCNNNNNGGC	1 cut(s)	1194
BglII	AGATCT	1 cut(s)	753
BlpI	GCTNAGC	1 cut(s)	580
Bme1390I	CCNGG	3 cut(s)	133, 433, 1385
Bme18I	GGWCC	1 cut(s)	1371
BmeT110I	CYCGRG	1 cut(s)	257
BmgT120I	GGNCC	3 cut(s)	1120, 1209, 1371
BmiI	GGNNCC	3 cut(s)	87, 929, 1407
BmrFI	CCNGG	3 cut(s)	133, 433, 1385
BmsI	GCATC	3 cut(s)	202, 534, 1238
BoxI	GACNNNNGTC	1 cut(s)	765
BplI	GAGNNNNNCTC	2 cut(s)	781, 813
Bpu10I	CCTNAGC	2 cut(s)	654, 1183
Bpu1102I	GCTNAGC	1 cut(s)	580
BpuEI	CTTGAG	1 cut(s)	62
BsaBI	GATNNNNATC	1 cut(s)	479
BsaHI	GRCGYC	3 cut(s)	928, 1137, 1406
BsaJI	CCNNGG	4 cut(s)	81, 290, 432, 1383
BsaXI	ACNNNNNCTCC	4 cut(s)	10, 40, 614, 644
Bsc4I	CCNNNNNNNGG	7 cut(s)	1184, 1218, 1244, 1384, 1395, 1402, 1429
Bse118I	RCCGGY	2 cut(s)	455, 1237
Bse1I	ACTGG	2 cut(s)	1373, 1407
Bse8I	GATNNNNATC	1 cut(s)	479
BseBI	CCWGG	3 cut(s)	133, 433, 1385
BseDI	CCNNGG	4 cut(s)	81, 290, 432, 1383
BseGI	GGATG	6 cut(s)	193, 499, 549, 1220, 1229, 1445
BseJI	GATNNNNATC	1 cut(s)	479
BseLI	CCNNNNNNNGG	7 cut(s)	1184, 1218, 1244, 1384, 1395, 1402, 1429
BseMII	CTCAG	6 cut(s)	75, 149, 726, 837, 1197, 1415
BseNI	ACTGG	2 cut(s)	1373, 1407
BseRI	GAGGAG	3 cut(s)	461, 703, 1280
BseYI	CCCAGC	2 cut(s)	1178, 1233
BsgI	GTGCAG	2 cut(s)	669, 1126
Bsh1236I	CGCG	1 cut(s)	1202
Bsh1285I	CGRYCG	1 cut(s)	1256
BshFI	GGCC	9 cut(s)	185, 749, 1105, 1121, 1188, 1211, 1222, 1388, 1422
BshNI	GGYRCC	2 cut(s)	927, 1405
BsiEI	CGRYCG	1 cut(s)	1256
BsiHKAI	GWGCWC	3 cut(s)	62, 318, 937
BsiHKCI	CYCGRG	1 cut(s)	257
BsiSI	CCGG	7 cut(s)	443, 456, 1212, 1223, 1238, 1345, 1396
BslFI	GGGAC	1 cut(s)	501
BslI	CCNNNNNNNGG	7 cut(s)	1184, 1218, 1244, 1384, 1395, 1402, 1429
BsmAI	GTCTC	2 cut(s)	570, 1342
BsmFI	GGGAC	1 cut(s)	501
BsnI	GGCC	9 cut(s)	185, 749, 1105, 1121, 1188, 1211, 1222, 1388, 1422
BsoBI	CYCGRG	1 cut(s)	257
Bsp1286I	GDGCHC	4 cut(s)	62, 90, 318, 937
Bsp143I	GATC	7 cut(s)	354, 450, 753, 1012, 1088, 1124, 1253
Bsp1720I	GCTNAGC	1 cut(s)	580
Bsp19I	CCATGG	1 cut(s)	290
BspACI	CCGC	1 cut(s)	1197
BspANI	GGCC	9 cut(s)	185, 749, 1105, 1121, 1188, 1211, 1222, 1388, 1422
BspCNI	CTCAG	6 cut(s)	74, 150, 727, 838, 1196, 1416
BspFNI	CGCG	1 cut(s)	1202
BspHI	TCATGA	2 cut(s)	310, 673
BspLI	GGNNCC	3 cut(s)	87, 929, 1407
BspMAI	CTGCAG	3 cut(s)	1176, 1327, 1438
BspMI	ACCTGC	3 cut(s)	1271, 1312, 1330
BspPI	GGATC	2 cut(s)	1007, 1083
BspT107I	GGYRCC	2 cut(s)	927, 1405
BspTI	CTTAAG	1 cut(s)	614
BsrFI	RCCGGY	2 cut(s)	455, 1237
BsrI	ACTGG	2 cut(s)	1373, 1407
BssAI	RCCGGY	2 cut(s)	455, 1237
BssECI	CCNNGG	4 cut(s)	81, 290, 432, 1383
BssMI	GATC	7 cut(s)	354, 450, 753, 1012, 1088, 1124, 1253
BssNI	GRCGYC	3 cut(s)	928, 1137, 1406
BssT1I	CCWWGG	2 cut(s)	81, 290
Bst2UI	CCWGG	3 cut(s)	133, 433, 1385
Bst4CI	ACNGT	3 cut(s)	666, 863, 1415
BstACI	GRCGYC	3 cut(s)	928, 1137, 1406
BstAFI	CTTAAG	1 cut(s)	614
BstAPI	GCANNNNNTGC	1 cut(s)	647
BstC8I	GCNNGC	1 cut(s)	1239
BstDEI	CTNAG	8 cut(s)	61, 158, 580, 654, 735, 846, 1183, 1424
BstDSI	CCRYGG	1 cut(s)	290
BstF5I	GGATG	6 cut(s)	193, 499, 549, 1220, 1229, 1445
BstFNI	CGCG	1 cut(s)	1202
BstH2I	RGCGCY	5 cut(s)	931, 1172, 1331, 1409, 1442
BstHHI	GCGC	6 cut(s)	930, 1171, 1202, 1330, 1408, 1441
BstKTI	GATC	7 cut(s)	357, 453, 756, 1015, 1091, 1127, 1256
BstMAI	GTCTC	2 cut(s)	570, 1342
BstMBI	GATC	7 cut(s)	354, 450, 753, 1012, 1088, 1124, 1253
BstMCI	CGRYCG	1 cut(s)	1256
BstMWI	GCNNNNNNNGC	5 cut(s)	647, 831, 1194, 1208, 1405
BstNI	CCWGG	3 cut(s)	133, 433, 1385
BstNSI	RCATGY	1 cut(s)	494
BstPAI	GACNNNNGTC	1 cut(s)	765
BstSCI	CCNGG	3 cut(s)	131, 431, 1383
BstSFI	CTRYAG	5 cut(s)	1043, 1172, 1323, 1362, 1434
BstUI	CGCG	1 cut(s)	1202
BstX2I	RGATCY	1 cut(s)	753
BstXI	CCANNNNNNTGG	2 cut(s)	792, 1418
BstYI	RGATCY	1 cut(s)	753
BsuRI	GGCC	9 cut(s)	185, 749, 1105, 1121, 1188, 1211, 1222, 1388, 1422
BtgI	CCRYGG	1 cut(s)	290
BtsCI	GGATG	6 cut(s)	193, 499, 549, 1220, 1229, 1445
BtsIMutI	CAGTG	1 cut(s)	732
BveI	ACCTGC	3 cut(s)	1271, 1312, 1330
Cac8I	GCNNGC	1 cut(s)	1239
CaiI	CAGNNNCTG	1 cut(s)	68
CciI	TCATGA	2 cut(s)	310, 673
CfoI	GCGC	6 cut(s)	930, 1171, 1202, 1330, 1408, 1441
Cfr10I	RCCGGY	2 cut(s)	455, 1237
Cfr13I	GGNCC	3 cut(s)	1120, 1209, 1371
Csp6I	GTAC	2 cut(s)	631, 1451
CviAII	CATG	5 cut(s)	291, 311, 484, 491, 674
CviQI	GTAC	2 cut(s)	631, 1451
DdeI	CTNAG	8 cut(s)	61, 158, 580, 654, 735, 846, 1183, 1424
DinI	GGCGCC	2 cut(s)	929, 1407
DpnI	GATC	7 cut(s)	356, 452, 755, 1014, 1090, 1126, 1255
DpnII	GATC	7 cut(s)	354, 450, 753, 1012, 1088, 1124, 1253
DrdI	GACNNNNNNGTC	1 cut(s)	1373
DseDI	GACNNNNNNGTC	1 cut(s)	1373
Ecl136II	GAGCTC	3 cut(s)	60, 316, 935
Eco130I	CCWWGG	2 cut(s)	81, 290
Eco147I	AGGCCT	1 cut(s)	1188
Eco24I	GRGCYC	4 cut(s)	62, 90, 318, 937
Eco47I	GGWCC	1 cut(s)	1371
Eco47III	AGCGCT	1 cut(s)	1329
Eco53kI	GAGCTC	3 cut(s)	60, 316, 935
Eco57I	CTGAAG	2 cut(s)	396, 1004
Eco88I	CYCGRG	1 cut(s)	257
EcoICRI	GAGCTC	3 cut(s)	60, 316, 935
EcoRI	GAATTC	1 cut(s)	740
EcoRII	CCWGG	3 cut(s)	131, 431, 1383
EcoT14I	CCWWGG	2 cut(s)	81, 290
EcoT22I	ATGCAT	1 cut(s)	195
EcoT38I	GRGCYC	4 cut(s)	62, 90, 318, 937
EgeI	GGCGCC	2 cut(s)	929, 1407
EheI	GGCGCC	2 cut(s)	929, 1407
ErhI	CCWWGG	2 cut(s)	81, 290
FaeI	CATG	5 cut(s)	294, 314, 487, 494, 677
FalI	AAGNNNNNCTT	2 cut(s)	568, 600
FaqI	GGGAC	1 cut(s)	501
FatI	CATG	5 cut(s)	290, 310, 483, 490, 673
FokI	GGATG	6 cut(s)	180, 486, 556, 1216, 1227, 1432
FriOI	GRGCYC	4 cut(s)	62, 90, 318, 937
FspBI	CTAG	4 cut(s)	917, 938, 1022, 1107
GlaI	GCGC	6 cut(s)	929, 1170, 1201, 1329, 1407, 1440
GsaI	CCCAGC	2 cut(s)	1182, 1237
HaeII	RGCGCY	5 cut(s)	931, 1172, 1331, 1409, 1442
HaeIII	GGCC	9 cut(s)	185, 749, 1105, 1121, 1188, 1211, 1222, 1388, 1422
HapII	CCGG	7 cut(s)	443, 456, 1212, 1223, 1238, 1345, 1396
HhaI	GCGC	6 cut(s)	930, 1171, 1202, 1330, 1408, 1441
Hin1I	GRCGYC	3 cut(s)	928, 1137, 1406
Hin1II	CATG	5 cut(s)	294, 314, 487, 494, 677
Hin6I	GCGC	6 cut(s)	928, 1169, 1200, 1328, 1406, 1439
HinP1I	GCGC	6 cut(s)	928, 1169, 1200, 1328, 1406, 1439
HindIII	AAGCTT	2 cut(s)	577, 611
HpaII	CCGG	7 cut(s)	443, 456, 1212, 1223, 1238, 1345, 1396
HphI	GGTGA	7 cut(s)	100, 279, 445, 619, 791, 1293, 1311
Hpy166II	GTNNAC	2 cut(s)	382, 662
Hpy188I	TCNGA	9 cut(s)	64, 70, 265, 271, 359, 472, 687, 1264, 1379
Hpy188III	TCNNGA	9 cut(s)	41, 95, 311, 557, 674, 845, 938, 1128, 1245
Hpy8I	GTNNAC	2 cut(s)	382, 662
Hpy99I	CGWCG	4 cut(s)	1104, 1168, 1196, 1344
HpyAV	CCTTC	5 cut(s)	4, 317, 530, 815, 1026
HpyCH4III	ACNGT	3 cut(s)	666, 863, 1415
HpyCH4IV	ACGT	1 cut(s)	1137
HpyF10VI	GCNNNNNNNGC	5 cut(s)	647, 831, 1194, 1208, 1405
HpyF3I	CTNAG	8 cut(s)	61, 158, 580, 654, 735, 846, 1183, 1424
HpySE526I	ACGT	1 cut(s)	1137
Hsp92I	GRCGYC	3 cut(s)	928, 1137, 1406
Hsp92II	CATG	5 cut(s)	294, 314, 487, 494, 677
HspAI	GCGC	6 cut(s)	928, 1169, 1200, 1328, 1406, 1439
KasI	GGCGCC	2 cut(s)	927, 1405
KroI	GCCGGC	1 cut(s)	1237
KroNI	GCCGGC	1 cut(s)	1239
Kzo9I	GATC	7 cut(s)	354, 450, 753, 1012, 1088, 1124, 1253
LmnI	GCTCC	4 cut(s)	57, 85, 321, 847
LweI	GCATC	3 cut(s)	202, 534, 1238
MaeI	CTAG	4 cut(s)	917, 938, 1022, 1107
MaeII	ACGT	1 cut(s)	1137
MaeIII	GTNAC	3 cut(s)	285, 758, 919
MalI	GATC	7 cut(s)	356, 452, 755, 1014, 1090, 1126, 1255
MboI	GATC	7 cut(s)	354, 450, 753, 1012, 1088, 1124, 1253
MboII	GAAGA	4 cut(s)	307, 662, 997, 1000
MfeI	CAATTG	1 cut(s)	152
MflI	RGATCY	1 cut(s)	753
MhlI	GDGCHC	4 cut(s)	62, 90, 318, 937
MluCI	AATT	8 cut(s)	127, 152, 334, 407, 560, 636, 740, 815
Mly113I	GGCGCC	2 cut(s)	928, 1406
MlyI	GAGTC	3 cut(s)	269, 790, 1344
MmeI	TCCRAC	5 cut(s)	13, 773, 891, 1242, 1402
Mph1103I	ATGCAT	1 cut(s)	195
MroNI	GCCGGC	1 cut(s)	1237
MroXI	GAANNNNTTC	1 cut(s)	299
MseI	TTAA	2 cut(s)	615, 711
MslI	CAYNNNNRTG	1 cut(s)	1416
MspCI	CTTAAG	1 cut(s)	614
MspI	CCGG	7 cut(s)	443, 456, 1212, 1223, 1238, 1345, 1396
MspR9I	CCNGG	3 cut(s)	133, 433, 1385
MunI	CAATTG	1 cut(s)	152
MvaI	CCWGG	3 cut(s)	133, 433, 1385
MvnI	CGCG	1 cut(s)	1202
MwoI	GCNNNNNNNGC	5 cut(s)	647, 831, 1194, 1208, 1405
NaeI	GCCGGC	1 cut(s)	1239
NarI	GGCGCC	2 cut(s)	928, 1406
NcoI	CCATGG	1 cut(s)	290
NdeII	GATC	7 cut(s)	354, 450, 753, 1012, 1088, 1124, 1253
NgoMIV	GCCGGC	1 cut(s)	1237
NlaIII	CATG	5 cut(s)	294, 314, 487, 494, 677
NlaIV	GGNNCC	3 cut(s)	87, 929, 1407
NmeAIII	GCCGAG	1 cut(s)	956
NmuCI	GTSAC	3 cut(s)	285, 758, 919
NsiI	ATGCAT	1 cut(s)	195
NspI	RCATGY	1 cut(s)	494
OliI	CACNNNNGTG	1 cut(s)	1416
PaeR7I	CTCGAG	1 cut(s)	257
PagI	TCATGA	2 cut(s)	310, 673
PaqCI	CACCTGC	2 cut(s)	1312, 1330
PceI	AGGCCT	1 cut(s)	1188
PciI	ACATGT	1 cut(s)	490
PdiI	GCCGGC	1 cut(s)	1239
PdmI	GAANNNNTTC	1 cut(s)	299
PfeI	GAWTC	7 cut(s)	65, 266, 480, 496, 1051, 1114, 1204
Ple19I	CGATCG	1 cut(s)	1256
PleI	GAGTC	3 cut(s)	268, 790, 1344
PluTI	GGCGCC	2 cut(s)	931, 1409
PpsI	GAGTC	3 cut(s)	268, 790, 1344
PscI	ACATGT	1 cut(s)	490
PshAI	GACNNNNGTC	1 cut(s)	765
PsiI	TTATAA	1 cut(s)	245
Psp124BI	GAGCTC	3 cut(s)	62, 318, 937
Psp6I	CCWGG	3 cut(s)	131, 431, 1383
PspFI	CCCAGC	2 cut(s)	1178, 1233
PspGI	CCWGG	3 cut(s)	131, 431, 1383
PspN4I	GGNNCC	3 cut(s)	87, 929, 1407
PspPI	GGNCC	3 cut(s)	1120, 1209, 1371
PspXI	VCTCGAGB	1 cut(s)	257
PstI	CTGCAG	3 cut(s)	1176, 1327, 1438
PstNI	CAGNNNCTG	1 cut(s)	68
PsuI	RGATCY	1 cut(s)	753
PvuI	CGATCG	1 cut(s)	1256
RsaI	GTAC	2 cut(s)	632, 1452
RsaNI	GTAC	2 cut(s)	631, 1451
RseI	CAYNNNNRTG	1 cut(s)	1416
SacI	GAGCTC	3 cut(s)	62, 318, 937
SaqAI	TTAA	2 cut(s)	615, 711
Sau3AI	GATC	7 cut(s)	354, 450, 753, 1012, 1088, 1124, 1253
Sau96I	GGNCC	3 cut(s)	1120, 1209, 1371
SchI	GAGTC	3 cut(s)	269, 790, 1344
ScrFI	CCNGG	3 cut(s)	133, 433, 1385
SduI	GDGCHC	4 cut(s)	62, 90, 318, 937
SfaNI	GCATC	3 cut(s)	202, 534, 1238
SfcI	CTRYAG	5 cut(s)	1043, 1172, 1323, 1362, 1434
SfoI	GGCGCC	2 cut(s)	929, 1407
Sfr274I	CTCGAG	1 cut(s)	257
SgrAI	CRCCGGYG	1 cut(s)	455
SinI	GGWCC	1 cut(s)	1371
SlaI	CTCGAG	1 cut(s)	257
SmiMI	CAYNNNNRTG	1 cut(s)	1416
SmlI	CTYRAG	3 cut(s)	41, 257, 614
SmoI	CTYRAG	3 cut(s)	41, 257, 614
SpeI	ACTAGT	1 cut(s)	916
Sse9I	AATT	8 cut(s)	127, 152, 334, 407, 560, 636, 740, 815
SseBI	AGGCCT	1 cut(s)	1188
SsiI	CCGC	1 cut(s)	1197
SspDI	GGCGCC	2 cut(s)	927, 1405
SspI	AATATT	1 cut(s)	724
SspMI	CTAG	4 cut(s)	917, 938, 1022, 1107
SstI	GAGCTC	3 cut(s)	62, 318, 937
StuI	AGGCCT	1 cut(s)	1188
StyD4I	CCNGG	3 cut(s)	131, 431, 1383
StyI	CCWWGG	2 cut(s)	81, 290
TaaI	ACNGT	3 cut(s)	666, 863, 1415
TaiI	ACGT	1 cut(s)	1140
TaqI	TCGA	5 cut(s)	258, 744, 1191, 1256, 1272
TasI	AATT	8 cut(s)	127, 152, 334, 407, 560, 636, 740, 815
TauI	GCSGC	1 cut(s)	1200
TfiI	GAWTC	7 cut(s)	65, 266, 480, 496, 1051, 1114, 1204
Tru1I	TTAA	2 cut(s)	615, 711
Tru9I	TTAA	2 cut(s)	615, 711
TscAI	CASTG	1 cut(s)	739
TseFI	GTSAC	3 cut(s)	285, 758, 919
Tsp45I	GTSAC	3 cut(s)	285, 758, 919
TspDTI	ATGAA	5 cut(s)	299, 662, 1008, 1064, 1127
TspGWI	ACGGA	2 cut(s)	1363, 1438
TspRI	CASTG	1 cut(s)	739
Vha464I	CTTAAG	1 cut(s)	614
VpaK11BI	GGWCC	1 cut(s)	1371
XapI	RAATTY	4 cut(s)	127, 334, 740, 815
XbaI	TCTAGA	1 cut(s)	937
XceI	RCATGY	1 cut(s)	494
XcmI	CCANNNNNNNNNTGG	2 cut(s)	178, 1241
XhoI	CTCGAG	1 cut(s)	257
XmnI	GAANNNNTTC	1 cut(s)	299
XspI	CTAG	4 cut(s)	917, 938, 1022, 1107
ZraI	GACGTC	1 cut(s)	1138
Zsp2I	ATGCAT	1 cut(s)	195

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.