Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0014662

Physical Location & Seq

Genomic Coordinates Forward (+)

49318864 .. 49322484

Gene Structure 3621 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG295600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGGACATGGAACCGGTGTTTTATGAGGCGTCGTCTTCGAATGGAATCGAGGAGCCAAAGGGAGTGCCCAAGTTTCTAGAAATGCAGGAGTGCTATAACATATGCATGGCAGCTTACAAAGAGGTCATGACTATGGCTGTGAAAGCAAACACTTGGGTTGTGGAGGTTCCACTGCTCGGTTCGATTGAGGAACTCCAGCAGATGTTCAGGGCTCCACCCTCTCCTGGGATGGAGATTGAGTATTCCATTGACAGCGGTGTTGTTCCGTTCAAGCTAGAGACTGTGGTTGCTGCCATGACAAATGTGGATGAATGGGCTTCAGCCTTGAGCAACATTGTTCATCACAGAACTGATGAAGTGCCGAGTGGTGTTATGAGTAATTTGGCGTGTAATACACCGCCACATACCCGTGACAATTTCAAGGGTGTAAAAACGATAAATGCTGAACTTCTCTTGCCCATGCCATGTATGCCAACACGTAAATTCAGTTTTGTCAGGTTTTTGAGGCAAGTCATACCAGATGTATGGGCTGTTGTTGATGTATCGACCGACTATTTTCCGCACATTGACTCTACACTGAAAGTGAACTGTAAGAGAAGGCCTTCTGGGGTCATCATTAGGAGGCGTGATGATCATTCTGAGGTTATATGGATTGAGAATATGGAAGTACAGAAATGCAATGTCCAAGATAGTATATACTCTGGAGTAATCAATTCAAACCTGGCATTCAGAGCAAAGCGCTGGATTAGTACATTGTCAACCAAAGAAAAGCGGATCGAAAGTAGATTTGTCACTCTTAGATTGCCTAATAATTTTTCTCAAGCATTTTCAGTTCGTGTTGCTCTGCTGACATTGACTAGAAGGTTGAAGAAGGCATATTTGAATTACATAACTGAGCATCCAGATGAAACTAAATGGGATTTACTATCAGACACAGGAGTTCAGATTTTGAAGGATACTGATGCAGAAGGAAAAGATAATTACATGGCAGTGACTACCTTCCGAGTCAAAGCAACTCCGAGCACAGTTTTTAACTTTCTTGTCAAAAGGACTCGGGAATTACAGTGGTCACATTTAGAAGAGATGGAAGAGCCTGAAGAAGTGATAACGTTAGTCACGGACGATGACAGCAACTGTATTACTTTACATGCAAAATCAGTTATGCAAACAGAGTCTGCAGAGAATTTTGAATATGTGTTACAAGAAGCTTCCAGGGATGAGTTTTGCTCTTTCATTATAGCATCACCTATCAGCCAGTCAGAAGTTAATAGTGCTTTAGGGCTTGGAAAATCATCTTGTGCCTTAAGACCTTTTGGTTTTTCCATAATACCTGATGGGTCTCGGGGACTCCTATCCGGTGCCTCCCTTGTAACTATGGCCTTCCAACGAGAGCTTGATGCTGATCTTGAAACTAGTGAAGTGATTGAAGGAATGAGCAATCATGTCAGCGATATTGTTGGAGCGATAAATGAAGCATATTCTGCAGTTACAGTAGGGGAAGAAGCAACAGAGCAAGCAACAGAGCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

START

Protein Analysis

509

Amino Acids

57.11

Weight (kDa)

4.92

Isoelectric Point (pI)

53.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
START	PF01852	38 - 256	5.2e-15	START domain
PDF2_C	PF25797	279 - 492	5.2e-21	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014662)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g20620 FvH4_2g20620
malus_domestica	MD00G1060500.v1.1 MD00G1060600.v1.1
pyrus_communis	pycom10g15300
rosa_chinensis	RchiOBHm_Chr6g0286791
rosa_laevigata	RLG00000012536
rosa_multiflora	Rmu_co8407681.1_g000001 Rmu_sc0007546.1_g000021 Rmu_ssc0000279.1_g000001
rosa_roxburghii	Rroxscaffold_7G00181970
rosa_rugosa	Rorug06G0183000
rosa_samantha	Rh6AG295600 Rh6BG300000 Rh6CG307700 Rh6DG291600
rosa_wichuraiana	Rw6G025490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1358
AciI	CCGC	4 cut(s)	255, 398, 560, 772
AclI	AACGTT	1 cut(s)	1109
AclWI	GGATC	1 cut(s)	782
AcsI	RAATTY	2 cut(s)	482, 1183
AcuI	CTGAAG	2 cut(s)	303, 1116
AcyI	GRCGYC	1 cut(s)	29
AfaI	GTAC	2 cut(s)	669, 751
AfeI	AGCGCT	1 cut(s)	740
AfiI	CCNNNNNNNGG	3 cut(s)	176, 224, 225
AflII	CTTAAG	1 cut(s)	1303
AflIII	ACRYGT	1 cut(s)	476
AgeI	ACCGGT	1 cut(s)	13
AgsI	TTSAA	9 cut(s)	271, 421, 717, 868, 883, 952, 1190, 1409, 1427
AhlI	ACTAGT	1 cut(s)	1412
AjnI	CCWGG	3 cut(s)	223, 720, 1211
AluBI	AGCT	5 cut(s)	113, 274, 1208, 1393, 1525
AluI	AGCT	5 cut(s)	113, 274, 1208, 1393, 1525
Alw21I	GWGCWC	1 cut(s)	1025
Alw26I	GTCTC	2 cut(s)	272, 1344
AlwI	GGATC	1 cut(s)	782
AlwNI	CAGNNNCTG	2 cut(s)	1134, 1175
Ama87I	CYCGRG	2 cut(s)	1053, 1341
Aor51HI	AGCGCT	1 cut(s)	740
AoxI	GGCC	2 cut(s)	599, 1377
ApeKI	GCWGC	2 cut(s)	110, 290
ApoI	RAATTY	2 cut(s)	482, 1183
AsiGI	ACCGGT	1 cut(s)	13
Asp700I	GAANNNNTTC	1 cut(s)	601
AspLEI	GCGC	1 cut(s)	741
AsuHPI	GGTGA	1 cut(s)	1236
AsuII	TTCGAA	1 cut(s)	38
AvaI	CYCGRG	2 cut(s)	1053, 1341
BaeGI	GKGCMC	1 cut(s)	69
BanI	GGYRCC	1 cut(s)	1358
BanII	GRGCYC	1 cut(s)	214
BbsI	GAAGAC	1 cut(s)	27
Bbv12I	GWGCWC	1 cut(s)	1025
BbvI	GCAGC	2 cut(s)	122, 277
BccI	CCATC	3 cut(s)	223, 1078, 1328
BciT130I	CCWGG	3 cut(s)	225, 722, 1213
BciVI	GTATCC	1 cut(s)	949
BclI	TGATCA	1 cut(s)	631
BcoDI	GTCTC	2 cut(s)	272, 1344
BcuI	ACTAGT	1 cut(s)	1412
BfaI	CTAG	4 cut(s)	77, 275, 858, 1413
BfmI	CTRYAG	3 cut(s)	1176, 1482, 1526
BfoI	RGCGCY	1 cut(s)	742
BfrI	CTTAAG	1 cut(s)	1303
BfuI	GTATCC	1 cut(s)	949
BisI	GCNGC	2 cut(s)	111, 291
BlsI	GCNGC	2 cut(s)	112, 292
Bme1390I	CCNGG	3 cut(s)	225, 722, 1213
BmeT110I	CYCGRG	2 cut(s)	1053, 1341
BmiI	GGNNCC	5 cut(s)	12, 54, 168, 213, 1360
BmrFI	CCNGG	3 cut(s)	225, 722, 1213
BmsI	GCATC	4 cut(s)	907, 952, 1250, 1387
BpiI	GAAGAC	1 cut(s)	27
BplI	GAGNNNNNCTC	2 cut(s)	1211, 1243
BpmI	CTGGAG	2 cut(s)	179, 723
Bpu14I	TTCGAA	1 cut(s)	38
BpuEI	CTTGAG	2 cut(s)	346, 804
BsaAI	YACGTR	1 cut(s)	479
BsaBI	GATNNNNATC	1 cut(s)	1401
BsaHI	GRCGYC	1 cut(s)	29
BsaI	GGTCTC	1 cut(s)	1344
BsaJI	CCNNGG	2 cut(s)	224, 1212
BsaWI	WCCGGW	2 cut(s)	13, 1355
BsaXI	ACNNNNNCTCC	2 cut(s)	224, 254
Bsc4I	CCNNNNNNNGG	3 cut(s)	176, 224, 225
Bse118I	RCCGGY	1 cut(s)	13
Bse1I	ACTGG	1 cut(s)	1255
Bse3DI	GCAATG	1 cut(s)	685
Bse8I	GATNNNNATC	1 cut(s)	1401
BseBI	CCWGG	3 cut(s)	225, 722, 1213
BseDI	CCNNGG	2 cut(s)	224, 1212
BseGI	GGATG	4 cut(s)	234, 313, 898, 1222
BseJI	GATNNNNATC	1 cut(s)	1401
BseLI	CCNNNNNNNGG	3 cut(s)	176, 224, 225
BseMI	GCAATG	1 cut(s)	685
BseMII	CTCAG	2 cut(s)	630, 885
BseNI	ACTGG	1 cut(s)	1255
BseRI	GAGGAG	1 cut(s)	65
BseSI	GKGCMC	1 cut(s)	69
BseXI	GCAGC	2 cut(s)	122, 277
Bsh1285I	CGRYCG	1 cut(s)	549
BshFI	GGCC	2 cut(s)	601, 1379
BshNI	GGYRCC	1 cut(s)	1358
BshTI	ACCGGT	1 cut(s)	13
BsiEI	CGRYCG	1 cut(s)	549
BsiHKAI	GWGCWC	1 cut(s)	1025
BsiHKCI	CYCGRG	2 cut(s)	1053, 1341
BsiSI	CCGG	2 cut(s)	14, 1356
BslFI	GGGAC	1 cut(s)	1359
BslI	CCNNNNNNNGG	3 cut(s)	176, 224, 225
BsmAI	GTCTC	2 cut(s)	272, 1344
BsmFI	GGGAC	1 cut(s)	1359
BsmI	GAATGC	1 cut(s)	725
BsnI	GGCC	2 cut(s)	601, 1379
Bso31I	GGTCTC	1 cut(s)	1344
BsoBI	CYCGRG	2 cut(s)	1053, 1341
Bsp119I	TTCGAA	1 cut(s)	38
Bsp1286I	GDGCHC	3 cut(s)	69, 214, 1025
Bsp143I	GATC	3 cut(s)	631, 774, 1402
BspACI	CCGC	4 cut(s)	255, 398, 560, 772
BspANI	GGCC	2 cut(s)	601, 1379
BspCNI	CTCAG	2 cut(s)	631, 886
BspHI	TCATGA	1 cut(s)	126
BspLI	GGNNCC	5 cut(s)	12, 54, 168, 213, 1360
BspMAI	CTGCAG	2 cut(s)	1180, 1486
BspPI	GGATC	1 cut(s)	782
BspQI	GCTCTTC	1 cut(s)	1083
BspT104I	TTCGAA	1 cut(s)	38
BspT107I	GGYRCC	1 cut(s)	1358
BspTI	CTTAAG	1 cut(s)	1303
BspTNI	GGTCTC	1 cut(s)	1344
BsrDI	GCAATG	1 cut(s)	685
BsrFI	RCCGGY	1 cut(s)	13
BsrI	ACTGG	1 cut(s)	1255
BssAI	RCCGGY	1 cut(s)	13
BssECI	CCNNGG	2 cut(s)	224, 1212
BssMI	GATC	3 cut(s)	631, 774, 1402
BssNI	GRCGYC	1 cut(s)	29
Bst2UI	CCWGG	3 cut(s)	225, 722, 1213
Bst4CI	ACNGT	6 cut(s)	283, 590, 1027, 1065, 1136, 1492
Bst6I	CTCTTC	2 cut(s)	1074, 1083
BstACI	GRCGYC	1 cut(s)	29
BstAFI	CTTAAG	1 cut(s)	1303
BstAPI	GCANNNNNTGC	1 cut(s)	1481
BstBAI	YACGTR	1 cut(s)	479
BstBI	TTCGAA	1 cut(s)	38
BstC8I	GCNNGC	1 cut(s)	1515
BstDEI	CTNAG	3 cut(s)	639, 797, 894
BstF5I	GGATG	4 cut(s)	234, 313, 898, 1222
BstH2I	RGCGCY	1 cut(s)	742
BstHHI	GCGC	1 cut(s)	741
BstKTI	GATC	3 cut(s)	634, 777, 1405
BstMAI	GTCTC	2 cut(s)	272, 1344
BstMBI	GATC	3 cut(s)	631, 774, 1402
BstMCI	CGRYCG	1 cut(s)	549
BstMWI	GCNNNNNNNGC	4 cut(s)	143, 469, 731, 1481
BstNI	CCWGG	3 cut(s)	225, 722, 1213
BstNSI	RCATGY	1 cut(s)	1151
BstSCI	CCNGG	3 cut(s)	223, 720, 1211
BstSFI	CTRYAG	3 cut(s)	1176, 1482, 1526
BstSLI	GKGCMC	1 cut(s)	69
BstV1I	GCAGC	2 cut(s)	122, 277
BstV2I	GAAGAC	1 cut(s)	27
BstXI	CCANNNNNNTGG	1 cut(s)	525
BsuI	GTATCC	1 cut(s)	949
BsuRI	GGCC	2 cut(s)	601, 1379
BtsCI	GGATG	4 cut(s)	234, 313, 898, 1222
BtsI	GCAGTG	2 cut(s)	170, 996
BtsIMutI	CAGTG	4 cut(s)	170, 575, 996, 1070
Cac8I	GCNNGC	1 cut(s)	1515
CaiI	CAGNNNCTG	2 cut(s)	1134, 1175
CciI	TCATGA	1 cut(s)	126
CfoI	GCGC	1 cut(s)	741
Cfr10I	RCCGGY	1 cut(s)	13
CseI	GACGC	1 cut(s)	18
Csp6I	GTAC	2 cut(s)	668, 750
CspAI	ACCGGT	1 cut(s)	13
CviAII	CATG	9 cut(s)	7, 106, 127, 295, 460, 465, 985, 1148, 1442
CviQI	GTAC	2 cut(s)	668, 750
DdeI	CTNAG	3 cut(s)	639, 797, 894
DpnI	GATC	3 cut(s)	633, 776, 1404
DpnII	GATC	3 cut(s)	631, 774, 1402
Eam1104I	CTCTTC	2 cut(s)	1074, 1083
EarI	CTCTTC	2 cut(s)	1074, 1083
Eco147I	AGGCCT	1 cut(s)	601
Eco24I	GRGCYC	1 cut(s)	214
Eco31I	GGTCTC	1 cut(s)	1344
Eco47III	AGCGCT	1 cut(s)	740
Eco57I	CTGAAG	2 cut(s)	303, 1116
Eco88I	CYCGRG	2 cut(s)	1053, 1341
EcoRII	CCWGG	3 cut(s)	223, 720, 1211
EcoT22I	ATGCAT	1 cut(s)	107
EcoT38I	GRGCYC	1 cut(s)	214
FaeI	CATG	9 cut(s)	10, 109, 130, 298, 463, 468, 988, 1151, 1445
FaqI	GGGAC	1 cut(s)	1359
FatI	CATG	9 cut(s)	6, 105, 126, 294, 459, 464, 984, 1147, 1441
FauNDI	CATATG	1 cut(s)	101
FbaI	TGATCA	1 cut(s)	631
Fnu4HI	GCNGC	2 cut(s)	111, 291
FokI	GGATG	4 cut(s)	241, 320, 885, 1229
FriOI	GRGCYC	1 cut(s)	214
Fsp4HI	GCNGC	2 cut(s)	111, 291
FspBI	CTAG	4 cut(s)	77, 275, 858, 1413
GlaI	GCGC	1 cut(s)	740
GluI	GCNGC	2 cut(s)	111, 291
GsuI	CTGGAG	2 cut(s)	179, 723
HaeII	RGCGCY	1 cut(s)	742
HaeIII	GGCC	2 cut(s)	601, 1379
HapII	CCGG	2 cut(s)	14, 1356
HgaI	GACGC	1 cut(s)	18
HhaI	GCGC	1 cut(s)	741
Hin1I	GRCGYC	1 cut(s)	29
Hin1II	CATG	9 cut(s)	10, 109, 130, 298, 463, 468, 988, 1151, 1445
Hin6I	GCGC	1 cut(s)	739
HinP1I	GCGC	1 cut(s)	739
HincII	GTYRAC	1 cut(s)	759
HindII	GTYRAC	1 cut(s)	759
HindIII	AAGCTT	1 cut(s)	1206
HinfI	GANTC	6 cut(s)	45, 569, 1005, 1051, 1172, 1347
HpaII	CCGG	2 cut(s)	14, 1356
HphI	GGTGA	1 cut(s)	1236
Hpy166II	GTNNAC	2 cut(s)	586, 759
Hpy188I	TCNGA	7 cut(s)	640, 731, 931, 945, 1004, 1020, 1261
Hpy188III	TCNNGA	6 cut(s)	77, 127, 702, 902, 1055, 1406
Hpy8I	GTNNAC	2 cut(s)	586, 759
Hpy99I	CGWCG	1 cut(s)	34
HpyAV	CCTTC	9 cut(s)	591, 612, 855, 865, 946, 962, 1009, 1390, 1421
HpyCH4III	ACNGT	6 cut(s)	283, 590, 1027, 1065, 1136, 1492
HpyCH4IV	ACGT	2 cut(s)	478, 1109
HpyCH4V	TGCA	8 cut(s)	85, 105, 678, 965, 1151, 1165, 1178, 1484
HpyF10VI	GCNNNNNNNGC	4 cut(s)	143, 469, 731, 1481
HpyF3I	CTNAG	3 cut(s)	639, 797, 894
HpySE526I	ACGT	2 cut(s)	478, 1109
Hsp92I	GRCGYC	1 cut(s)	29
Hsp92II	CATG	9 cut(s)	10, 109, 130, 298, 463, 468, 988, 1151, 1445
HspAI	GCGC	1 cut(s)	739
Ksp22I	TGATCA	1 cut(s)	631
Kzo9I	GATC	3 cut(s)	631, 774, 1402
LguI	GCTCTTC	1 cut(s)	1083
LmnI	GCTCC	3 cut(s)	52, 217, 1460
Lsp1109I	GCAGC	2 cut(s)	122, 277
LweI	GCATC	4 cut(s)	907, 952, 1250, 1387
MaeI	CTAG	4 cut(s)	77, 275, 858, 1413
MaeII	ACGT	2 cut(s)	478, 1109
MaeIII	GTNAC	8 cut(s)	410, 790, 991, 1068, 1114, 1197, 1369, 1486
MalI	GATC	3 cut(s)	633, 776, 1404
MboI	GATC	3 cut(s)	631, 774, 1402
MboII	GAAGA	6 cut(s)	27, 880, 1091, 1100, 1109, 1511
MhlI	GDGCHC	3 cut(s)	69, 214, 1025
MluCI	AATT	9 cut(s)	379, 415, 482, 712, 811, 883, 979, 1058, 1183
MlyI	GAGTC	5 cut(s)	563, 1014, 1045, 1181, 1341
MmeI	TCCRAC	2 cut(s)	1408, 1438
Mph1103I	ATGCAT	1 cut(s)	107
MroXI	GAANNNNTTC	1 cut(s)	601
MseI	TTAA	3 cut(s)	1032, 1266, 1304
MslI	CAYNNNNRTG	5 cut(s)	104, 131, 408, 903, 989
MspA1I	CMGCKG	1 cut(s)	255
MspCI	CTTAAG	1 cut(s)	1303
MspI	CCGG	2 cut(s)	14, 1356
MspR9I	CCNGG	3 cut(s)	225, 722, 1213
Mva1269I	GAATGC	1 cut(s)	725
MvaI	CCWGG	3 cut(s)	225, 722, 1213
MwoI	GCNNNNNNNGC	4 cut(s)	143, 469, 731, 1481
NdeI	CATATG	1 cut(s)	101
NdeII	GATC	3 cut(s)	631, 774, 1402
NlaIII	CATG	9 cut(s)	10, 109, 130, 298, 463, 468, 988, 1151, 1445
NlaIV	GGNNCC	5 cut(s)	12, 54, 168, 213, 1360
NmeAIII	GCCGAG	1 cut(s)	387
NmuCI	GTSAC	5 cut(s)	410, 790, 991, 1068, 1114
NsiI	ATGCAT	1 cut(s)	107
NspI	RCATGY	1 cut(s)	1151
NspV	TTCGAA	1 cut(s)	38
PagI	TCATGA	1 cut(s)	126
PceI	AGGCCT	1 cut(s)	601
PciSI	GCTCTTC	1 cut(s)	1083
PctI	GAATGC	1 cut(s)	725
PdmI	GAANNNNTTC	1 cut(s)	601
PfeI	GAWTC	1 cut(s)	45
PinAI	ACCGGT	1 cut(s)	13
PkrI	GCNGC	2 cut(s)	112, 292
PleI	GAGTC	5 cut(s)	563, 1013, 1045, 1180, 1341
PpsI	GAGTC	5 cut(s)	563, 1013, 1045, 1180, 1341
Ppu21I	YACGTR	1 cut(s)	479
Psp1406I	AACGTT	1 cut(s)	1109
Psp6I	CCWGG	3 cut(s)	223, 720, 1211
PspGI	CCWGG	3 cut(s)	223, 720, 1211
PspN4I	GGNNCC	5 cut(s)	12, 54, 168, 213, 1360
PstI	CTGCAG	2 cut(s)	1180, 1486
PstNI	CAGNNNCTG	2 cut(s)	1134, 1175
RsaI	GTAC	2 cut(s)	669, 751
RsaNI	GTAC	2 cut(s)	668, 750
RseI	CAYNNNNRTG	5 cut(s)	104, 131, 408, 903, 989
SapI	GCTCTTC	1 cut(s)	1083
SaqAI	TTAA	3 cut(s)	1032, 1266, 1304
SatI	GCNGC	2 cut(s)	111, 291
Sau3AI	GATC	3 cut(s)	631, 774, 1402
SchI	GAGTC	5 cut(s)	563, 1014, 1045, 1181, 1341
ScrFI	CCNGG	3 cut(s)	225, 722, 1213
SduI	GDGCHC	3 cut(s)	69, 214, 1025
SfaNI	GCATC	4 cut(s)	907, 952, 1250, 1387
SfcI	CTRYAG	3 cut(s)	1176, 1482, 1526
SfuI	TTCGAA	1 cut(s)	38
SmiMI	CAYNNNNRTG	5 cut(s)	104, 131, 408, 903, 989
SmlI	CTYRAG	3 cut(s)	325, 819, 1303
SmoI	CTYRAG	3 cut(s)	325, 819, 1303
SpeI	ACTAGT	1 cut(s)	1412
Sse9I	AATT	9 cut(s)	379, 415, 482, 712, 811, 883, 979, 1058, 1183
SseBI	AGGCCT	1 cut(s)	601
SsiI	CCGC	4 cut(s)	255, 398, 560, 772
SspMI	CTAG	4 cut(s)	77, 275, 858, 1413
StuI	AGGCCT	1 cut(s)	601
StyD4I	CCNGG	3 cut(s)	223, 720, 1211
TaaI	ACNGT	6 cut(s)	283, 590, 1027, 1065, 1136, 1492
TaiI	ACGT	2 cut(s)	481, 1112
TaqI	TCGA	5 cut(s)	38, 48, 182, 545, 777
TaqII	GACCGA	1 cut(s)	563
TasI	AATT	9 cut(s)	379, 415, 482, 712, 811, 883, 979, 1058, 1183
TatI	WGTACW	2 cut(s)	667, 749
TfiI	GAWTC	1 cut(s)	45
Tru1I	TTAA	3 cut(s)	1032, 1266, 1304
Tru9I	TTAA	3 cut(s)	1032, 1266, 1304
TscAI	CASTG	4 cut(s)	177, 582, 996, 1070
TseFI	GTSAC	5 cut(s)	410, 790, 991, 1068, 1114
TseI	GCWGC	2 cut(s)	110, 290
Tsp45I	GTSAC	5 cut(s)	410, 790, 991, 1068, 1114
TspDTI	ATGAA	6 cut(s)	324, 329, 369, 921, 1222, 1485
TspGWI	ACGGA	2 cut(s)	255, 1133
TspRI	CASTG	4 cut(s)	177, 582, 996, 1070
Vha464I	CTTAAG	1 cut(s)	1303
XapI	RAATTY	2 cut(s)	482, 1183
XbaI	TCTAGA	1 cut(s)	76
XceI	RCATGY	1 cut(s)	1151
XcmI	CCANNNNNNNNNTGG	1 cut(s)	301
XmnI	GAANNNNTTC	1 cut(s)	601
XspI	CTAG	4 cut(s)	77, 275, 858, 1413
Zsp2I	ATGCAT	1 cut(s)	107

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.