Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0014662

Physical Location & Seq

Genomic Coordinates Forward (+)

48852428 .. 48922860

Gene Structure 70433 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG307700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2634 bp

ATGGGGCGGCGTGTGGGTCTTGGGGCTGGTGCATCGACTGTGGCTCGCGGGGCTCGGGGATGTGCTGGCTTGGTGGAGATCAGCGGCTTGGCTCGTGGTGCGGTTGGCATTGTGGCGGGGCTTGGGCGGTGCGGGTTCGTGGTGACGGGACCTTTGGGTAGAGCTGCACAGGCGGCTGCAGGTGTGGTGGACGGGTGGACTGGACTTGGGTCAACCCTAGCTTGCTGGATCTTGAGATGGGCTCTTCTCTTTGGGGCTGCCCTATTGGGAAGATATCATATTACACCGGAGTCTCTTCACGCAGACACAAAACAGTTCTCTGTTGCTCACTCCGATTATGAAGAGAGAACTGAAGTGACATCAAATCACTCACTCCGATTCCGATCATATCAGAGCCCTAACCACTCCGATCAGATCAGCTTCTCTATTTCTCCGATCGATTTCGCTATGGGTTTGATTGATCGCAGCGGCGGAGAAACCATAAGCTACCGTACTCCATTAAGATCCTTCTTGAGTCTGCAATCTATAACTGCCAAGAGTTTCAGGTCTTACAAGTCCCGGTTTAAGTTATTGAATGATGGCACTATTCGATGCTGGAGGGAGGGCAAGCGGCACAATGCACATCTGAAGAGATGGCCCAGGAACTCGAAAGCGAAATTCGAGTGTGTGTTTAGTGAAGTTGGTGTTGTTAAAGAAGATGGGTTTTCGATGCCTGTGAACCCCAGCAGCCAAGAAACCTTGGGTCATTGTTTCATAGAGTTTAATTCTCCTCAGTCCTCAAGGTATCCAGGGTCTCCTTCCTTGCTTAGTCCCGTACTAAAGGAAGACGAAGAACCCGTTCATAGTGATGAAACTAGTGCAGATGACCATGACGACATAATGCAGTGGAATGTGGATGCCCGTCTTGTTGGGTATAATTGCTCCAAGAATTTTATGGGATCCAGGGGTGGTGGCATGGATTCTGGTTGGCTTCTGGGTTGGAGAACTCCAATGGCTATGGTGGCTGCGCTGGATCGAGACAACCTTGATGCAGACGGCGCCGACGTCATCGCTAGTTTGGCTGGTCCACACCCATTTGGGTCAGGGTCTGAAAATCCAACGGCTACAAATCCCAACATGGACATGGAACCGGTGTTTTATGAGGCGTCGTCTTCGAATGGAATCGAGGAGCCAAAGGGAGTGCCCAAGTTTCTAGAAATGCAGGAGTGCTATAACATATGTATGGCAGCTTACAAAGAGGTCATGACTATGGCTGTGAAAGCAAACACTTGGGTTGTGGAGGTTCCACTGCTCGGTTCGATTGAGGAACTCCAGCAGATGTTCAGGGCTCCACCCTCTCCTGGGATGGAGATTGAGTATTCCATTGACAGCGGTGTTGTTCCGTTCAAGCTAGAGACTGTGGTTGCTGCCATGACAAATGTGGATGAATGGGCTTCAGCCTTGAGCAACATTGTTCATCACAGAACTGATGAAGTGCCGAGTGGTGTTATGAGTAATTTGGCGTGTAATACACCACCACATACCCGTGACAATTTCAAGGGTGTAAAAACGATAAATGCTGAACTTCTCTTGCCCATGCCATGTATGCCAACACGTAAATTCAGTTTCGTCAGGTTTTTGAGGCAAGTCATACCAGATGTATGGGCTGTTGTTGATGTATCGACCGACTATTTTCCGCACATTGACTCTACACTGAAAGTGAACTGTAAGAGAAGGCCTTCTGGGGTCATCATTAGGAGGCGTGATGATCATTCTGAGGTTATATGGATTGAGAATATGGAAGTACAGAAATGCAATGTCCAAGATAGTATATACTCTGGAGTAATCAATTCAAACCTGGCATTCGGAGCAAAGCGCTGGATTAGTACATTGTCAACCAAAGAAAAGCGGATCGAAAGTAGATTTGTCACTCTTAGACTGCCTAATAATTTTTCTCAAGCATTTTCAGTTCGTGTTGCTCTGCTGACATTGACTAGAAGGTTGAAGAAGGCATATTTGAATTACATAACTGAGCATCCAGATGAAACTAAATGGGATTTACTATCAGACACAGGAGTTCAGATTTTGAAGGATGCTGATGCAGAAGGAAAAGATAATTACATGGCAGTGACTACCTTCCGAGTCAAAGCAACTCCGAGCACAGTTTTTAACTTTCTTGTCAAAAGGACTCGGGAATTACAGTGGTCACATTTAGAAGAGATGGAAGAGCCTGAAGAAGTGATAACGTTAGTCACGGACGATGACAGCAACTGTATTACTTTACATGCAAAATCAGTTATGCAAACAGAGTCTGCAGAGAATTTTGAATATGTGTTACAAGAGGCTTCCAGGGATGAGTTTTGCTCTTTCATTATAGCATCACCTATCAGCCAGTCAGAAGTTAATAGTGCTTTAGGGCTTGGAAAATCATCTTGTGCCTTAAGACCTTTTGGTTTTTCCATAATACCTGATGGGTCTCGGGGACTCCTATCCGGTGCCTCCCTTGTAACTATGGCCTTCCAACGAGAGCTTGACGCTGATCTTGAAACTAGTGAAGTGATTGAAGGAATGAGCAATCATGTCAGCGATATTGTTGGAGCGATAAATGAAGCATATTCTGCAGTTACAGTAGGGGAAGAAGCAACAGAGCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

START

Protein Analysis

877

Amino Acids

96.67

Weight (kDa)

5.44

Isoelectric Point (pI)

50.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
START	PF01852	410 - 628	2e-15	START domain
PDF2_C	PF25797	651 - 864	2.3e-20	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014662)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g20620 FvH4_2g20620
malus_domestica	MD00G1060500.v1.1 MD00G1060600.v1.1
pyrus_communis	pycom10g15300
rosa_chinensis	RchiOBHm_Chr6g0286791
rosa_laevigata	RLG00000012536
rosa_multiflora	Rmu_co8407681.1_g000001 Rmu_sc0007546.1_g000021 Rmu_ssc0000279.1_g000001
rosa_roxburghii	Rroxscaffold_7G00181970
rosa_rugosa	Rorug06G0183000
rosa_samantha	Rh6AG295600 Rh6BG300000 Rh6CG307700 Rh6DG291600
rosa_wichuraiana	Rw6G025490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	170
AatII	GACGTC	1 cut(s)	1047
Acc36I	ACCTGC	1 cut(s)	170
AccB1I	GGYRCC	2 cut(s)	1037, 2474
AccII	CGCG	1 cut(s)	48
AclI	AACGTT	1 cut(s)	2225
AclWI	GGATC	6 cut(s)	236, 498, 933, 946, 1020, 1898
AcsI	RAATTY	4 cut(s)	656, 928, 1598, 2299
AcuI	CTGAAG	4 cut(s)	372, 647, 1419, 2232
AcyI	GRCGYC	3 cut(s)	1038, 1044, 1145
AfaI	GTAC	4 cut(s)	493, 816, 1785, 1867
AfeI	AGCGCT	1 cut(s)	1856
AfiI	CCNNNNNNNGG	3 cut(s)	1292, 1340, 1341
AflII	CTTAAG	1 cut(s)	2419
AflIII	ACRYGT	1 cut(s)	1592
AgeI	ACCGGT	1 cut(s)	1129
AhlI	ACTAGT	2 cut(s)	854, 2528
AjnI	CCWGG	6 cut(s)	638, 787, 941, 1339, 1836, 2327
AluBI	AGCT	8 cut(s)	164, 221, 420, 486, 1229, 1390, 2509, 2629
AluI	AGCT	8 cut(s)	164, 221, 420, 486, 1229, 1390, 2509, 2629
Alw21I	GWGCWC	1 cut(s)	2141
Alw26I	GTCTC	5 cut(s)	297, 798, 1011, 1388, 2460
AlwI	GGATC	6 cut(s)	236, 498, 933, 946, 1020, 1898
AlwNI	CAGNNNCTG	3 cut(s)	1088, 2250, 2291
Ama87I	CYCGRG	3 cut(s)	54, 2169, 2457
Aor51HI	AGCGCT	1 cut(s)	1856
AoxI	GGCC	3 cut(s)	635, 1715, 2493
ApeKI	GCWGC	8 cut(s)	164, 176, 257, 465, 726, 1004, 1226, 1406
ApoI	RAATTY	4 cut(s)	656, 928, 1598, 2299
ArsI	GACNNNNNNTTYG	2 cut(s)	136, 168
AsiGI	ACCGGT	1 cut(s)	1129
Asp700I	GAANNNNTTC	2 cut(s)	837, 1717
AspLEI	GCGC	3 cut(s)	1009, 1040, 1857
AspS9I	GGNCC	3 cut(s)	149, 636, 1064
AsuC2I	CCSGG	1 cut(s)	559
AsuHPI	GGTGA	2 cut(s)	154, 2352
AsuII	TTCGAA	1 cut(s)	1154
AvaI	CYCGRG	3 cut(s)	54, 2169, 2457
AvaII	GGWCC	2 cut(s)	149, 1064
BaeGI	GKGCMC	1 cut(s)	1185
BamHI	GGATCC	1 cut(s)	938
BanI	GGYRCC	2 cut(s)	1037, 2474
BanII	GRGCYC	4 cut(s)	55, 244, 398, 1330
BauI	CACGAG	1 cut(s)	93
BbsI	GAAGAC	2 cut(s)	831, 1143
Bbv12I	GWGCWC	1 cut(s)	2141
BbvI	GCAGC	8 cut(s)	151, 163, 244, 477, 738, 991, 1238, 1393
BccI	CCATC	7 cut(s)	231, 572, 627, 692, 1339, 2194, 2444
BceAI	ACGGC	2 cut(s)	1051, 1116
BciT130I	CCWGG	6 cut(s)	640, 789, 943, 1341, 1838, 2329
BciVI	GTATCC	1 cut(s)	795
BclI	TGATCA	1 cut(s)	1747
BcnI	CCSGG	1 cut(s)	559
BcoDI	GTCTC	5 cut(s)	297, 798, 1011, 1388, 2460
BcuI	ACTAGT	2 cut(s)	854, 2528
BfaI	CTAG	7 cut(s)	218, 855, 1053, 1193, 1391, 1974, 2529
BfmI	CTRYAG	4 cut(s)	177, 2292, 2598, 2630
BfoI	RGCGCY	2 cut(s)	1041, 1858
BfrI	CTTAAG	1 cut(s)	2419
BfuAI	ACCTGC	1 cut(s)	170
BfuI	GTATCC	1 cut(s)	795
Bme1390I	CCNGG	7 cut(s)	559, 640, 789, 943, 1341, 1838, 2329
Bme18I	GGWCC	2 cut(s)	149, 1064
BmeT110I	CYCGRG	3 cut(s)	54, 2169, 2457
BmgT120I	GGNCC	3 cut(s)	149, 636, 1064
BmiI	GGNNCC	8 cut(s)	150, 940, 1039, 1128, 1170, 1284, 1329, 2476
BmrFI	CCNGG	7 cut(s)	559, 640, 789, 943, 1341, 1838, 2329
BmsI	GCATC	9 cut(s)	41, 581, 699, 886, 1018, 2023, 2062, 2068, 2366
BoxI	GACNNNNGTC	1 cut(s)	208
BpiI	GAAGAC	2 cut(s)	831, 1143
BplI	GAGNNNNNCTC	4 cut(s)	226, 258, 2327, 2359
BpmI	CTGGAG	3 cut(s)	616, 1295, 1839
Bpu14I	TTCGAA	1 cut(s)	1154
BpuEI	CTTGAG	5 cut(s)	253, 532, 763, 1462, 1920
BpuMI	CCSGG	1 cut(s)	559
Bsa29I	ATCGAT	1 cut(s)	438
BsaAI	YACGTR	1 cut(s)	1595
BsaBI	GATNNNNATC	1 cut(s)	382
BsaHI	GRCGYC	3 cut(s)	1038, 1044, 1145
BsaI	GGTCTC	2 cut(s)	798, 2460
BsaJI	CCNNGG	6 cut(s)	638, 738, 788, 942, 1340, 2328
BsaWI	WCCGGW	3 cut(s)	286, 1129, 2471
BsaXI	ACNNNNNCTCC	2 cut(s)	1340, 1370
Bsc4I	CCNNNNNNNGG	3 cut(s)	1292, 1340, 1341
Bse118I	RCCGGY	1 cut(s)	1129
Bse1I	ACTGG	2 cut(s)	205, 2371
Bse3DI	GCAATG	1 cut(s)	1801
Bse8I	GATNNNNATC	1 cut(s)	382
BseBI	CCWGG	6 cut(s)	640, 789, 943, 1341, 1838, 2329
BseCI	ATCGAT	1 cut(s)	438
BseDI	CCNNGG	6 cut(s)	638, 738, 788, 942, 1340, 2328
BseGI	GGATG	7 cut(s)	65, 901, 1350, 1429, 2014, 2077, 2338
BseJI	GATNNNNATC	1 cut(s)	382
BseLI	CCNNNNNNNGG	3 cut(s)	1292, 1340, 1341
BseMI	GCAATG	1 cut(s)	1801
BseMII	CTCAG	3 cut(s)	785, 1746, 2001
BseNI	ACTGG	2 cut(s)	205, 2371
BseRI	GAGGAG	2 cut(s)	759, 1181
BseSI	GKGCMC	1 cut(s)	1185
BseXI	GCAGC	8 cut(s)	151, 163, 244, 477, 738, 991, 1238, 1393
BseYI	CCCAGC	1 cut(s)	722
BsgI	GTGCAG	2 cut(s)	150, 879
Bsh1236I	CGCG	1 cut(s)	48
Bsh1285I	CGRYCG	2 cut(s)	438, 1665
BshFI	GGCC	3 cut(s)	637, 1717, 2495
BshNI	GGYRCC	2 cut(s)	1037, 2474
BshTI	ACCGGT	1 cut(s)	1129
BshVI	ATCGAT	1 cut(s)	438
BsiEI	CGRYCG	2 cut(s)	438, 1665
BsiHKAI	GWGCWC	1 cut(s)	2141
BsiHKCI	CYCGRG	3 cut(s)	54, 2169, 2457
BsiSI	CCGG	4 cut(s)	287, 559, 1130, 2472
BslFI	GGGAC	4 cut(s)	162, 541, 795, 2475
BslI	CCNNNNNNNGG	3 cut(s)	1292, 1340, 1341
BsmAI	GTCTC	5 cut(s)	297, 798, 1011, 1388, 2460
BsmFI	GGGAC	4 cut(s)	162, 541, 795, 2475
BsmI	GAATGC	1 cut(s)	1841
BsnI	GGCC	3 cut(s)	637, 1717, 2495
Bso31I	GGTCTC	2 cut(s)	798, 2460
BsoBI	CYCGRG	3 cut(s)	54, 2169, 2457
Bsp119I	TTCGAA	1 cut(s)	1154
Bsp1286I	GDGCHC	6 cut(s)	55, 244, 398, 1185, 1330, 2141
BspANI	GGCC	3 cut(s)	637, 1717, 2495
BspCNI	CTCAG	3 cut(s)	784, 1747, 2002
BspDI	ATCGAT	1 cut(s)	438
BspFNI	CGCG	1 cut(s)	48
BspHI	TCATGA	1 cut(s)	1242
BspLI	GGNNCC	8 cut(s)	150, 940, 1039, 1128, 1170, 1284, 1329, 2476
BspMAI	CTGCAG	3 cut(s)	181, 2296, 2602
BspMI	ACCTGC	1 cut(s)	170
BspPI	GGATC	6 cut(s)	236, 498, 933, 946, 1020, 1898
BspQI	GCTCTTC	2 cut(s)	249, 2199
BspT104I	TTCGAA	1 cut(s)	1154
BspT107I	GGYRCC	2 cut(s)	1037, 2474
BspTI	CTTAAG	1 cut(s)	2419
BspTNI	GGTCTC	2 cut(s)	798, 2460
BsrDI	GCAATG	1 cut(s)	1801
BsrFI	RCCGGY	1 cut(s)	1129
BsrI	ACTGG	2 cut(s)	205, 2371
BssAI	RCCGGY	1 cut(s)	1129
BssECI	CCNNGG	6 cut(s)	638, 738, 788, 942, 1340, 2328
BssNI	GRCGYC	3 cut(s)	1038, 1044, 1145
BssSI	CACGAG	1 cut(s)	93
BssT1I	CCWWGG	1 cut(s)	738
Bst2BI	CACGAG	1 cut(s)	93
Bst2UI	CCWGG	6 cut(s)	640, 789, 943, 1341, 1838, 2329
Bst4CI	ACNGT	9 cut(s)	40, 315, 491, 1399, 1706, 2143, 2181, 2252, 2608
Bst6I	CTCTTC	6 cut(s)	249, 300, 336, 623, 2190, 2199
BstACI	GRCGYC	3 cut(s)	1038, 1044, 1145
BstAFI	CTTAAG	1 cut(s)	2419
BstAPI	GCANNNNNTGC	1 cut(s)	2597
BstBAI	YACGTR	1 cut(s)	1595
BstBI	TTCGAA	1 cut(s)	1154
BstC8I	GCNNGC	4 cut(s)	46, 67, 223, 608
BstDEI	CTNAG	5 cut(s)	771, 806, 1755, 1913, 2010
BstF5I	GGATG	7 cut(s)	65, 901, 1350, 1429, 2014, 2077, 2338
BstFNI	CGCG	1 cut(s)	48
BstH2I	RGCGCY	2 cut(s)	1041, 1858
BstHHI	GCGC	3 cut(s)	1009, 1040, 1857
BstMAI	GTCTC	5 cut(s)	297, 798, 1011, 1388, 2460
BstMCI	CGRYCG	2 cut(s)	438, 1665
BstNI	CCWGG	6 cut(s)	640, 789, 943, 1341, 1838, 2329
BstNSI	RCATGY	1 cut(s)	2267
BstPAI	GACNNNNGTC	1 cut(s)	208
BstSCI	CCNGG	7 cut(s)	557, 638, 787, 941, 1339, 1836, 2327
BstSFI	CTRYAG	4 cut(s)	177, 2292, 2598, 2630
BstSLI	GKGCMC	1 cut(s)	1185
BstUI	CGCG	1 cut(s)	48
BstV1I	GCAGC	8 cut(s)	151, 163, 244, 477, 738, 991, 1238, 1393
BstV2I	GAAGAC	2 cut(s)	831, 1143
BstX2I	RGATCY	3 cut(s)	228, 503, 938
BstXI	CCANNNNNNTGG	1 cut(s)	1641
BstYI	RGATCY	3 cut(s)	228, 503, 938
Bsu15I	ATCGAT	1 cut(s)	438
BsuI	GTATCC	1 cut(s)	795
BsuRI	GGCC	3 cut(s)	637, 1717, 2495
BsuTUI	ATCGAT	1 cut(s)	438
BtgZI	GCGATG	1 cut(s)	1033
BtsCI	GGATG	7 cut(s)	65, 901, 1350, 1429, 2014, 2077, 2338
BtsI	GCAGTG	3 cut(s)	890, 1286, 2112
BtsIMutI	CAGTG	5 cut(s)	890, 1286, 1691, 2112, 2186
BveI	ACCTGC	1 cut(s)	170
Cac8I	GCNNGC	4 cut(s)	46, 67, 223, 608
CaiI	CAGNNNCTG	3 cut(s)	1088, 2250, 2291
CciI	TCATGA	1 cut(s)	1242
CfoI	GCGC	3 cut(s)	1009, 1040, 1857
Cfr10I	RCCGGY	1 cut(s)	1129
Cfr13I	GGNCC	3 cut(s)	149, 636, 1064
ClaI	ATCGAT	1 cut(s)	438
CseI	GACGC	2 cut(s)	1134, 2522
Csp6I	GTAC	4 cut(s)	492, 815, 1784, 1866
CspAI	ACCGGT	1 cut(s)	1129
CviQI	GTAC	4 cut(s)	492, 815, 1784, 1866
DdeI	CTNAG	5 cut(s)	771, 806, 1755, 1913, 2010
DinI	GGCGCC	1 cut(s)	1039
Eam1104I	CTCTTC	6 cut(s)	249, 300, 336, 623, 2190, 2199
EarI	CTCTTC	6 cut(s)	249, 300, 336, 623, 2190, 2199
EciI	GGCGGA	1 cut(s)	486
Eco130I	CCWWGG	1 cut(s)	738
Eco147I	AGGCCT	1 cut(s)	1717
Eco24I	GRGCYC	4 cut(s)	55, 244, 398, 1330
Eco31I	GGTCTC	2 cut(s)	798, 2460
Eco32I	GATATC	1 cut(s)	275
Eco47I	GGWCC	2 cut(s)	149, 1064
Eco47III	AGCGCT	1 cut(s)	1856
Eco57I	CTGAAG	4 cut(s)	372, 647, 1419, 2232
Eco88I	CYCGRG	3 cut(s)	54, 2169, 2457
EcoO109I	RGGNCCY	1 cut(s)	149
EcoRII	CCWGG	6 cut(s)	638, 787, 941, 1339, 1836, 2327
EcoRV	GATATC	1 cut(s)	275
EcoT14I	CCWWGG	1 cut(s)	738
EcoT38I	GRGCYC	4 cut(s)	55, 244, 398, 1330
EgeI	GGCGCC	1 cut(s)	1039
EheI	GGCGCC	1 cut(s)	1039
ErhI	CCWWGG	1 cut(s)	738
FaqI	GGGAC	4 cut(s)	162, 541, 795, 2475
FauI	CCCGC	3 cut(s)	41, 109, 125
FauNDI	CATATG	1 cut(s)	1217
FbaI	TGATCA	1 cut(s)	1747
FokI	GGATG	7 cut(s)	72, 908, 1357, 1436, 2001, 2084, 2345
FriOI	GRGCYC	4 cut(s)	55, 244, 398, 1330
FspBI	CTAG	7 cut(s)	218, 855, 1053, 1193, 1391, 1974, 2529
GlaI	GCGC	3 cut(s)	1008, 1039, 1856
GsaI	CCCAGC	1 cut(s)	726
GsuI	CTGGAG	3 cut(s)	616, 1295, 1839
HaeII	RGCGCY	2 cut(s)	1041, 1858
HaeIII	GGCC	3 cut(s)	637, 1717, 2495
HapII	CCGG	4 cut(s)	287, 559, 1130, 2472
HgaI	GACGC	2 cut(s)	1134, 2522
HhaI	GCGC	3 cut(s)	1009, 1040, 1857
Hin1I	GRCGYC	3 cut(s)	1038, 1044, 1145
Hin6I	GCGC	3 cut(s)	1007, 1038, 1855
HinP1I	GCGC	3 cut(s)	1007, 1038, 1855
HincII	GTYRAC	2 cut(s)	213, 1875
HindII	GTYRAC	2 cut(s)	213, 1875
HpaII	CCGG	4 cut(s)	287, 559, 1130, 2472
HphI	GGTGA	2 cut(s)	154, 2352
Hpy166II	GTNNAC	7 cut(s)	190, 198, 213, 718, 1067, 1702, 1875
Hpy188III	TCNNGA	9 cut(s)	232, 511, 1016, 1193, 1243, 1818, 2018, 2171, 2522
Hpy8I	GTNNAC	7 cut(s)	190, 198, 213, 718, 1067, 1702, 1875
Hpy99I	CGWCG	2 cut(s)	1046, 1150
HpyCH4III	ACNGT	9 cut(s)	40, 315, 491, 1399, 1706, 2143, 2181, 2252, 2608
HpyCH4IV	ACGT	3 cut(s)	1044, 1594, 2225
HpyF3I	CTNAG	5 cut(s)	771, 806, 1755, 1913, 2010
HpySE526I	ACGT	3 cut(s)	1044, 1594, 2225
Hsp92I	GRCGYC	3 cut(s)	1038, 1044, 1145
HspAI	GCGC	3 cut(s)	1007, 1038, 1855
KasI	GGCGCC	1 cut(s)	1037
Ksp22I	TGATCA	1 cut(s)	1747
LguI	GCTCTTC	2 cut(s)	249, 2199
LmnI	GCTCC	5 cut(s)	926, 1168, 1333, 1847, 2576
Lsp1109I	GCAGC	8 cut(s)	151, 163, 244, 477, 738, 991, 1238, 1393
LweI	GCATC	9 cut(s)	41, 581, 699, 886, 1018, 2023, 2062, 2068, 2366
MaeI	CTAG	7 cut(s)	218, 855, 1053, 1193, 1391, 1974, 2529
MaeII	ACGT	3 cut(s)	1044, 1594, 2225
MflI	RGATCY	3 cut(s)	228, 503, 938
MhlI	GDGCHC	6 cut(s)	55, 244, 398, 1185, 1330, 2141
Mly113I	GGCGCC	1 cut(s)	1038
MlyI	GAGTC	7 cut(s)	299, 523, 1679, 2130, 2161, 2297, 2457
MmeI	TCCRAC	4 cut(s)	959, 1121, 2524, 2554
MroXI	GAANNNNTTC	2 cut(s)	837, 1717
MseI	TTAA	7 cut(s)	500, 564, 690, 762, 2148, 2382, 2420
MslI	CAYNNNNRTG	7 cut(s)	846, 1121, 1220, 1247, 1524, 2019, 2105
MspA1I	CMGCKG	3 cut(s)	84, 468, 1371
MspCI	CTTAAG	1 cut(s)	2419
MspI	CCGG	4 cut(s)	287, 559, 1130, 2472
MspR9I	CCNGG	7 cut(s)	559, 640, 789, 943, 1341, 1838, 2329
Mva1269I	GAATGC	1 cut(s)	1841
MvaI	CCWGG	6 cut(s)	640, 789, 943, 1341, 1838, 2329
MvnI	CGCG	1 cut(s)	48
NarI	GGCGCC	1 cut(s)	1038
NciI	CCSGG	1 cut(s)	559
NdeI	CATATG	1 cut(s)	1217
NlaIV	GGNNCC	8 cut(s)	150, 940, 1039, 1128, 1170, 1284, 1329, 2476
NmeAIII	GCCGAG	1 cut(s)	1503
NmuCI	GTSAC	7 cut(s)	142, 355, 1526, 1906, 2107, 2184, 2230
NspI	RCATGY	1 cut(s)	2267
NspV	TTCGAA	1 cut(s)	1154
PagI	TCATGA	1 cut(s)	1242
PaqCI	CACCTGC	1 cut(s)	170
PceI	AGGCCT	1 cut(s)	1717
PciSI	GCTCTTC	2 cut(s)	249, 2199
PcsI	WCGNNNNNNNCGW	2 cut(s)	834, 1041
PctI	GAATGC	1 cut(s)	1841
PdmI	GAANNNNTTC	2 cut(s)	837, 1717
PfeI	GAWTC	3 cut(s)	378, 959, 1161
PinAI	ACCGGT	1 cut(s)	1129
Ple19I	CGATCG	1 cut(s)	438
PleI	GAGTC	7 cut(s)	298, 522, 1679, 2129, 2161, 2296, 2457
PluTI	GGCGCC	1 cut(s)	1041
PpsI	GAGTC	7 cut(s)	298, 522, 1679, 2129, 2161, 2296, 2457
Ppu21I	YACGTR	1 cut(s)	1595
PpuMI	RGGWCCY	1 cut(s)	149
PshAI	GACNNNNGTC	1 cut(s)	208
Psp1406I	AACGTT	1 cut(s)	2225
Psp5II	RGGWCCY	1 cut(s)	149
Psp6I	CCWGG	6 cut(s)	638, 787, 941, 1339, 1836, 2327
PspFI	CCCAGC	1 cut(s)	722
PspGI	CCWGG	6 cut(s)	638, 787, 941, 1339, 1836, 2327
PspN4I	GGNNCC	8 cut(s)	150, 940, 1039, 1128, 1170, 1284, 1329, 2476
PspPI	GGNCC	3 cut(s)	149, 636, 1064
PspPPI	RGGWCCY	1 cut(s)	149
PstI	CTGCAG	3 cut(s)	181, 2296, 2602
PstNI	CAGNNNCTG	3 cut(s)	1088, 2250, 2291
PsuI	RGATCY	3 cut(s)	228, 503, 938
PvuI	CGATCG	1 cut(s)	438
RsaI	GTAC	4 cut(s)	493, 816, 1785, 1867
RsaNI	GTAC	4 cut(s)	492, 815, 1784, 1866
RseI	CAYNNNNRTG	7 cut(s)	846, 1121, 1220, 1247, 1524, 2019, 2105
SapI	GCTCTTC	2 cut(s)	249, 2199
SaqAI	TTAA	7 cut(s)	500, 564, 690, 762, 2148, 2382, 2420
Sau96I	GGNCC	3 cut(s)	149, 636, 1064
SchI	GAGTC	7 cut(s)	299, 523, 1679, 2130, 2161, 2297, 2457
ScrFI	CCNGG	7 cut(s)	559, 640, 789, 943, 1341, 1838, 2329
SduI	GDGCHC	6 cut(s)	55, 244, 398, 1185, 1330, 2141
SfaNI	GCATC	9 cut(s)	41, 581, 699, 886, 1018, 2023, 2062, 2068, 2366
SfcI	CTRYAG	4 cut(s)	177, 2292, 2598, 2630
SfoI	GGCGCC	1 cut(s)	1039
SfuI	TTCGAA	1 cut(s)	1154
SinI	GGWCC	2 cut(s)	149, 1064
SmiMI	CAYNNNNRTG	7 cut(s)	846, 1121, 1220, 1247, 1524, 2019, 2105
SmlI	CTYRAG	6 cut(s)	232, 511, 778, 1441, 1935, 2419
SmoI	CTYRAG	6 cut(s)	232, 511, 778, 1441, 1935, 2419
SpeI	ACTAGT	2 cut(s)	854, 2528
SseBI	AGGCCT	1 cut(s)	1717
SspDI	GGCGCC	1 cut(s)	1037
SspMI	CTAG	7 cut(s)	218, 855, 1053, 1193, 1391, 1974, 2529
StuI	AGGCCT	1 cut(s)	1717
StyD4I	CCNGG	7 cut(s)	557, 638, 787, 941, 1339, 1836, 2327
StyI	CCWWGG	1 cut(s)	738
TaaI	ACNGT	9 cut(s)	40, 315, 491, 1399, 1706, 2143, 2181, 2252, 2608
TaiI	ACGT	3 cut(s)	1047, 1597, 2228
TaqII	GACCGA	1 cut(s)	1679
TatI	WGTACW	2 cut(s)	1783, 1865
TauI	GCSGC	5 cut(s)	10, 87, 176, 471, 613
TfiI	GAWTC	3 cut(s)	378, 959, 1161
Tru1I	TTAA	7 cut(s)	500, 564, 690, 762, 2148, 2382, 2420
Tru9I	TTAA	7 cut(s)	500, 564, 690, 762, 2148, 2382, 2420
TscAI	CASTG	5 cut(s)	890, 1293, 1698, 2112, 2186
TseFI	GTSAC	7 cut(s)	142, 355, 1526, 1906, 2107, 2184, 2230
TseI	GCWGC	8 cut(s)	164, 176, 257, 465, 726, 1004, 1226, 1406
Tsp45I	GTSAC	7 cut(s)	142, 355, 1526, 1906, 2107, 2184, 2230
TspGWI	ACGGA	2 cut(s)	1371, 2249
TspRI	CASTG	5 cut(s)	890, 1293, 1698, 2112, 2186
Vha464I	CTTAAG	1 cut(s)	2419
VpaK11BI	GGWCC	2 cut(s)	149, 1064
XapI	RAATTY	4 cut(s)	656, 928, 1598, 2299
XbaI	TCTAGA	1 cut(s)	1192
XceI	RCATGY	1 cut(s)	2267
XcmI	CCANNNNNNNNNTGG	3 cut(s)	931, 1120, 1417
XmnI	GAANNNNTTC	2 cut(s)	837, 1717
XspI	CTAG	7 cut(s)	218, 855, 1053, 1193, 1391, 1974, 2529
ZraI	GACGTC	1 cut(s)	1045

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.