Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0006788

Physical Location & Seq

Genomic Coordinates Forward (+)

57638922 .. 57644616

Gene Structure 5695 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG378200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGGAATTTGAAGAAGGAAAAAGCAATGGTGATAGCATGGAGTTCACTAGGGCGGCTCAATGCTCCAAGAATGAAGCCAATGGTTTTGAATTTGCGATATGTAATGATGTTGCCAAGAGCAGCTCCTCAGGGGCAAGTGAGGGTATTCGGACTTACAAGAGGCGGAGGCGTGAGAGGTGGAGTTGGGACAGCAAATCACAGGAAGATGGGAGAGCTAATGGGGAATCTTGGAGTCAAATGGTGGACCAGCGTCTAAAGCAACCGGTGGGCCCGGTTATACACAACACCTCTTCTGAGCAAGTCCATCTTCGAATAAATAGTTCTGATGATTGCTCAGGGAGACAGTGGAGAAATGCCGTACTGGAGCACATGTGTCAGTCAATAAGTGATGATGAAGGTGGTGTACAGGTGTGCATCAGAGAAGCCCTGGGCCATCTTCGACAGATTGATCATACAGTGCCTAAGGAATTTGGTGAAGATAATGAGGATCGGCACAAGTGTTTTCTGCCAGTACGGTCAGTCTGGAATGGACCTCATAATGTAGCCAGTGGGCAGGAGGATGTTATATCTAATGGCTCTTCAAGTAAATCAAAGCATCATACAGTCACTTCGACGTGCCAACATGCTTTTTTCAATATCTTAGTCTCAGAGAAGTTTGCTTTATTGTGCAAGCTGCTGTTACAAAATTTTCAAGGAATCAAGGCTGACAGCATTTTTGACCTTAAACACATAAACTCAAGGATGAAAAGTGGAGTTTATGAAGATTCACCGTTGCTCTTCTCAAAGGATATGCAACAGGTATGGAGAAAGCTTCAAGGGGTTGGTACGGAATTGATTTCCCTTGCAAAAAGCCTCTCGGACATGTCAAGGAGTTGCAAGGACCAGGTGGGAGGTTCAGGCTACAGCACATTTGAAGTTGGGAAAAATGAGACAGAGGATTGTGGTGTATACACAGTATACACTTGCAGGCACTGTGGAGACAAGGCAAATGGGAGTGATTGTCTAGTATGTGATTCATGTGAGGAGATGTACCATGTATCTTGCATTCAGCCTGCTGTCAAAGGCATTCCTACAAAAAGTTGGTATTGTGCAAGTTGCACTGCTTGTGGTATTGCATCACCGCATGAGAATTGTGAAGTGTGTGAAAGGCTGATTGCCAGCAAAAGTCTAGTTGATGGAGTTGGCGGTGAAAATGTTCCTACAAATGAGGAAACAGTCGAGTTGGGAGATAACTCAAATTATAGTACAGATGATGGAATTCAACTATCTGAAGATAATGGCGACTTGAACCTTTGCAAAGTTTGTGGAGTTGTGGTAGTAAAGGGTGAGACGGTGAAAATATGTGGTCATCCATACTGCATGAACAAGTACTACCATGTGAGGTGTCTGACGGCAGGGCAGTTGAAGCTGTATGGTCCACGTTGGTACTGCCCTTCTTGTCTATGCAGAGCTTGTCTCACTGATAAAGATGATGATAAGATTGTTCTTTGTGATGGCTGCGATCATGCGTACCATATCTATTGCTTGAACCCACCACTCTGTTCCATTCCAAAAGGAAAATGGTTTTGCAGAAAATGTGATGCAACAATTCAGATGATACGCAGAGCAAAAAGGGCTTATCAAAAAAATGAAAAGCAACAGGATAAGAAAAGTGAAGGATCAATTAAGTGGAATGAAAAAGTTGATGATGGAGAATCAGAACAAGGTAGGGGGGGAATGGATGTGCTTCTGCATGCAGTCAAGACTCTAGATCATGAAAAGAAAATGGCTGCTACTGAGATAATGAGAAACTTTCAGGACAGACAGAATTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PHD

Protein Analysis

604

Amino Acids

67.5

Weight (kDa)

6.15

Isoelectric Point (pI)

48.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHD	PF00628	322 - 366	9.4e-08	PHD-finger
PHD	PF00628	482 - 526	2.9e-11	PHD-finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006788)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G77250
fragaria_vesca	FvH4_2g28030 FvH4_2g28030
malus_domestica	MD08G1160700.v1.1 MD15G1132400.v1.1
prunus_persica	Prupe.1G487600_v2.0.a1 Prupe.1G487600_v2.0.a1 Prupe.1G487600_v2.0.a1 Prupe.1G487600_v2.0.a1 Prupe.1G487600_v2.0.a1 Prupe.1G487600_v2.0.a1
pyrus_communis	pycom08g13450 pycom15g11950
rosa_chinensis	RchiOBHm_Chr6g0296911
rosa_laevigata	RLG00000011647
rosa_multiflora	Rmu_co8128438.1_g000001 Rmu_sc0007272.1_g000001 Rmu_sc0018303.1_g000003
rosa_roxburghii	Rroxscaffold_7G00171040
rosa_rugosa	Rorug06G0267500 Rorug06G0267600
rosa_samantha	Rh6AG378200 Rh6BG386200 Rh6CG391600 Rh6DG378900
rosa_wichuraiana	Rw6G033060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	948, 957
AciI	CCGC	4 cut(s)	53, 163, 1121, 1185
AclWI	GGATC	2 cut(s)	495, 1666
AcsI	RAATTY	6 cut(s)	5, 89, 467, 685, 1257, 1807
AcuI	CTGAAG	1 cut(s)	1290
AfaI	GTAC	9 cut(s)	360, 405, 513, 826, 1031, 1246, 1370, 1427, 1511
AflIII	ACRYGT	2 cut(s)	369, 861
AgeI	ACCGGT	1 cut(s)	262
AjiI	CACGTC	1 cut(s)	615
AjnI	CCWGG	2 cut(s)	426, 882
AluBI	AGCT	6 cut(s)	123, 215, 673, 811, 1408, 1451
AluI	AGCT	6 cut(s)	123, 215, 673, 811, 1408, 1451
Alw21I	GWGCWC	1 cut(s)	369
Alw26I	GTCTC	6 cut(s)	334, 649, 923, 972, 1322, 1460
AlwI	GGATC	2 cut(s)	495, 1666
AlwNI	CAGNNNCTG	1 cut(s)	972
AoxI	GGCC	2 cut(s)	268, 430
ApaI	GGGCCC	1 cut(s)	272
ApeKI	GCWGC	4 cut(s)	120, 673, 1497, 1769
ApoI	RAATTY	6 cut(s)	5, 89, 467, 685, 1257, 1807
ArsI	GACNNNNNNTTYG	2 cut(s)	698, 730
AsiGI	ACCGGT	1 cut(s)	262
Asp700I	GAANNNNTTC	1 cut(s)	1194
AspS9I	GGNCC	7 cut(s)	244, 268, 269, 430, 530, 880, 1415
AsuC2I	CCSGG	1 cut(s)	272
AsuHPI	GGTGA	7 cut(s)	41, 485, 759, 1110, 1199, 1337, 1345
AsuII	TTCGAA	1 cut(s)	310
AvaII	GGWCC	4 cut(s)	244, 530, 880, 1415
AxyI	CCTNAGG	2 cut(s)	127, 462
BaeGI	GKGCMC	1 cut(s)	272
BanII	GRGCYC	1 cut(s)	272
BarI	GAAGNNNNNNTAC	2 cut(s)	387, 419
Bbv12I	GWGCWC	1 cut(s)	369
BbvI	GCAGC	4 cut(s)	132, 660, 1484, 1756
BccI	CCATC	7 cut(s)	200, 312, 441, 1169, 1247, 1487, 1682
BceAI	ACGGC	2 cut(s)	341, 1407
BciT130I	CCWGG	2 cut(s)	428, 884
BclI	TGATCA	1 cut(s)	448
BcnI	CCSGG	1 cut(s)	272
BcoDI	GTCTC	6 cut(s)	334, 649, 923, 972, 1322, 1460
BfaI	CTAG	4 cut(s)	48, 1004, 1169, 1748
BfmI	CTRYAG	1 cut(s)	901
BisI	GCNGC	5 cut(s)	54, 121, 674, 1498, 1770
BlsI	GCNGC	5 cut(s)	55, 122, 675, 1499, 1771
BmcAI	AGTACT	1 cut(s)	1370
Bme1390I	CCNGG	3 cut(s)	272, 428, 884
Bme18I	GGWCC	4 cut(s)	244, 530, 880, 1415
BmgBI	CACGTC	1 cut(s)	615
BmgT120I	GGNCC	7 cut(s)	244, 268, 269, 430, 530, 880, 1415
BmiI	GGNNCC	1 cut(s)	270
BmrFI	CCNGG	3 cut(s)	272, 428, 884
BmsI	GCATC	4 cut(s)	423, 604, 1124, 1570
BoxI	GACNNNNGTC	1 cut(s)	249
BplI	GAGNNNNNCTC	2 cut(s)	1440, 1472
BpmI	CTGGAG	1 cut(s)	383
Bpu10I	CCTNAGC	1 cut(s)	334
Bpu14I	TTCGAA	1 cut(s)	310
BpuEI	CTTGAG	1 cut(s)	721
BpuMI	CCSGG	1 cut(s)	272
BsaJI	CCNNGG	2 cut(s)	426, 427
BsaWI	WCCGGW	1 cut(s)	262
BsaXI	ACNNNNNCTCC	6 cut(s)	356, 386, 985, 1015, 1299, 1329
Bse118I	RCCGGY	1 cut(s)	262
Bse1I	ACTGG	3 cut(s)	366, 509, 546
Bse21I	CCTNAGG	2 cut(s)	127, 462
Bse3DI	GCAATG	1 cut(s)	31
BseBI	CCWGG	2 cut(s)	428, 884
BseDI	CCNNGG	2 cut(s)	426, 427
BseGI	GGATG	4 cut(s)	565, 747, 1348, 1726
BseMI	GCAATG	1 cut(s)	31
BseMII	CTCAG	5 cut(s)	141, 285, 348, 660, 1767
BseNI	ACTGG	3 cut(s)	366, 509, 546
BseRI	GAGGAG	2 cut(s)	115, 1037
BseSI	GKGCMC	1 cut(s)	272
BseXI	GCAGC	4 cut(s)	132, 660, 1484, 1756
BshFI	GGCC	2 cut(s)	270, 432
BshTI	ACCGGT	1 cut(s)	262
BsiHKAI	GWGCWC	1 cut(s)	369
BsiSI	CCGG	2 cut(s)	263, 272
BslFI	GGGAC	1 cut(s)	200
BsmAI	GTCTC	6 cut(s)	334, 649, 923, 972, 1322, 1460
BsmBI	CGTCTC	1 cut(s)	1322
BsmFI	GGGAC	1 cut(s)	200
BsmI	GAATGC	2 cut(s)	1044, 1065
BsnI	GGCC	2 cut(s)	270, 432
Bsp119I	TTCGAA	1 cut(s)	310
Bsp120I	GGGCCC	1 cut(s)	268
Bsp1286I	GDGCHC	2 cut(s)	272, 369
Bsp1407I	TGTACA	1 cut(s)	403
Bsp143I	GATC	5 cut(s)	448, 487, 1501, 1658, 1750
BspACI	CCGC	4 cut(s)	53, 163, 1121, 1185
BspANI	GGCC	2 cut(s)	270, 432
BspCNI	CTCAG	5 cut(s)	140, 286, 347, 659, 1768
BspHI	TCATGA	1 cut(s)	1753
BspLI	GGNNCC	1 cut(s)	270
BspPI	GGATC	2 cut(s)	495, 1666
BspQI	GCTCTTC	2 cut(s)	583, 782
BspT104I	TTCGAA	1 cut(s)	310
BsrDI	GCAATG	1 cut(s)	31
BsrFI	RCCGGY	1 cut(s)	262
BsrGI	TGTACA	1 cut(s)	403
BsrI	ACTGG	3 cut(s)	366, 509, 546
BssAI	RCCGGY	1 cut(s)	262
BssECI	CCNNGG	2 cut(s)	426, 427
BssMI	GATC	5 cut(s)	448, 487, 1501, 1658, 1750
BssNAI	GTATAC	2 cut(s)	949, 958
Bst1107I	GTATAC	2 cut(s)	949, 958
Bst2UI	CCWGG	2 cut(s)	428, 884
Bst4CI	ACNGT	9 cut(s)	345, 457, 516, 604, 771, 955, 974, 1216, 1333
Bst6I	CTCTTC	3 cut(s)	295, 583, 782
BstAUI	TGTACA	1 cut(s)	403
BstBI	TTCGAA	1 cut(s)	310
BstC8I	GCNNGC	5 cut(s)	671, 968, 1053, 1159, 1734
BstDEI	CTNAG	7 cut(s)	127, 294, 334, 462, 640, 646, 1776
BstF5I	GGATG	4 cut(s)	565, 747, 1348, 1726
BstKTI	GATC	5 cut(s)	451, 490, 1504, 1661, 1753
BstMAI	GTCTC	6 cut(s)	334, 649, 923, 972, 1322, 1460
BstMBI	GATC	5 cut(s)	448, 487, 1501, 1658, 1750
BstMWI	GCNNNNNNNGC	3 cut(s)	256, 1405, 1613
BstNI	CCWGG	2 cut(s)	428, 884
BstNSI	RCATGY	4 cut(s)	373, 626, 865, 1736
BstPAI	GACNNNNGTC	1 cut(s)	249
BstSCI	CCNGG	3 cut(s)	270, 426, 882
BstSFI	CTRYAG	1 cut(s)	901
BstSLI	GKGCMC	1 cut(s)	272
BstV1I	GCAGC	4 cut(s)	132, 660, 1484, 1756
BstZ17I	GTATAC	2 cut(s)	949, 958
Bsu36I	CCTNAGG	2 cut(s)	127, 462
BsuRI	GGCC	2 cut(s)	270, 432
BtrI	CACGTC	1 cut(s)	615
BtsCI	GGATG	4 cut(s)	565, 747, 1348, 1726
BtsI	GCAGTG	1 cut(s)	1098
BtsIMutI	CAGTG	6 cut(s)	350, 462, 553, 970, 1098, 1458
Cac8I	GCNNGC	5 cut(s)	671, 968, 1053, 1159, 1734
CaiI	CAGNNNCTG	1 cut(s)	972
CciI	TCATGA	1 cut(s)	1753
Cfr10I	RCCGGY	1 cut(s)	262
Cfr13I	GGNCC	7 cut(s)	244, 268, 269, 430, 530, 880, 1415
CseI	GACGC	1 cut(s)	239
CsiI	ACCWGGT	1 cut(s)	882
Csp6I	GTAC	9 cut(s)	359, 404, 512, 825, 1030, 1245, 1369, 1426, 1510
CspAI	ACCGGT	1 cut(s)	262
CspCI	CAANNNNNGTGG	2 cut(s)	1285, 1320
CviQI	GTAC	9 cut(s)	359, 404, 512, 825, 1030, 1245, 1369, 1426, 1510
DdeI	CTNAG	7 cut(s)	127, 294, 334, 462, 640, 646, 1776
DpnI	GATC	5 cut(s)	450, 489, 1503, 1660, 1752
DpnII	GATC	5 cut(s)	448, 487, 1501, 1658, 1750
Eam1104I	CTCTTC	3 cut(s)	295, 583, 782
EarI	CTCTTC	3 cut(s)	295, 583, 782
EciI	GGCGGA	1 cut(s)	178
Eco24I	GRGCYC	1 cut(s)	272
Eco47I	GGWCC	4 cut(s)	244, 530, 880, 1415
Eco57I	CTGAAG	1 cut(s)	1290
Eco81I	CCTNAGG	2 cut(s)	127, 462
EcoRI	GAATTC	1 cut(s)	1257
EcoRII	CCWGG	2 cut(s)	426, 882
EcoT38I	GRGCYC	1 cut(s)	272
Esp3I	CGTCTC	1 cut(s)	1322
FalI	AAGNNNNNCTT	2 cut(s)	291, 323
FaqI	GGGAC	1 cut(s)	200
FbaI	TGATCA	1 cut(s)	448
FblI	GTMKAC	2 cut(s)	948, 957
Fnu4HI	GCNGC	5 cut(s)	54, 121, 674, 1498, 1770
FokI	GGATG	4 cut(s)	572, 754, 1335, 1733
FriOI	GRGCYC	1 cut(s)	272
Fsp4HI	GCNGC	5 cut(s)	54, 121, 674, 1498, 1770
FspBI	CTAG	4 cut(s)	48, 1004, 1169, 1748
GluI	GCNGC	5 cut(s)	54, 121, 674, 1498, 1770
GsuI	CTGGAG	1 cut(s)	383
HaeIII	GGCC	2 cut(s)	270, 432
HapII	CCGG	2 cut(s)	263, 272
HgaI	GACGC	1 cut(s)	239
HindIII	AAGCTT	1 cut(s)	809
HinfI	GANTC	7 cut(s)	224, 232, 696, 764, 1013, 1694, 1744
HpaII	CCGG	2 cut(s)	263, 272
HphI	GGTGA	7 cut(s)	41, 485, 759, 1110, 1199, 1337, 1345
Hpy166II	GTNNAC	6 cut(s)	45, 244, 404, 949, 958, 1418
Hpy188III	TCNNGA	5 cut(s)	523, 1741, 1748, 1754, 1796
Hpy8I	GTNNAC	6 cut(s)	45, 244, 404, 949, 958, 1418
Hpy99I	CGWCG	1 cut(s)	616
HpyAV	CCTTC	4 cut(s)	8, 389, 1443, 1649
HpyCH4III	ACNGT	9 cut(s)	345, 457, 516, 604, 771, 955, 974, 1216, 1333
HpyCH4IV	ACGT	2 cut(s)	614, 1420
HpyF10VI	GCNNNNNNNGC	3 cut(s)	256, 1405, 1613
HpyF3I	CTNAG	7 cut(s)	127, 294, 334, 462, 640, 646, 1776
HpySE526I	ACGT	2 cut(s)	614, 1420
Ksp22I	TGATCA	1 cut(s)	448
Kzo9I	GATC	5 cut(s)	448, 487, 1501, 1658, 1750
LguI	GCTCTTC	2 cut(s)	583, 782
LmnI	GCTCC	3 cut(s)	68, 128, 364
Lsp1109I	GCAGC	4 cut(s)	132, 660, 1484, 1756
LweI	GCATC	4 cut(s)	423, 604, 1124, 1570
MabI	ACCWGGT	1 cut(s)	882
MaeI	CTAG	4 cut(s)	48, 1004, 1169, 1748
MaeII	ACGT	2 cut(s)	614, 1420
MaeIII	GTNAC	2 cut(s)	604, 678
MalI	GATC	5 cut(s)	450, 489, 1503, 1660, 1752
MboI	GATC	5 cut(s)	448, 487, 1501, 1658, 1750
MhlI	GDGCHC	2 cut(s)	272, 369
MlyI	GAGTC	2 cut(s)	241, 1738
MroXI	GAANNNNTTC	1 cut(s)	1194
MseI	TTAA	2 cut(s)	723, 1665
MspI	CCGG	2 cut(s)	263, 272
MspR9I	CCNGG	3 cut(s)	272, 428, 884
Mva1269I	GAATGC	2 cut(s)	1044, 1065
MvaI	CCWGG	2 cut(s)	428, 884
MwoI	GCNNNNNNNGC	3 cut(s)	256, 1405, 1613
NciI	CCSGG	1 cut(s)	272
NdeII	GATC	5 cut(s)	448, 487, 1501, 1658, 1750
NlaIV	GGNNCC	1 cut(s)	270
NmuCI	GTSAC	1 cut(s)	604
NspI	RCATGY	4 cut(s)	373, 626, 865, 1736
NspV	TTCGAA	1 cut(s)	310
PaeI	GCATGC	1 cut(s)	1736
PagI	TCATGA	1 cut(s)	1753
PasI	CCCWGGG	1 cut(s)	427
PciI	ACATGT	2 cut(s)	369, 861
PciSI	GCTCTTC	2 cut(s)	583, 782
PctI	GAATGC	2 cut(s)	1044, 1065
PdmI	GAANNNNTTC	1 cut(s)	1194
PfeI	GAWTC	5 cut(s)	224, 696, 764, 1013, 1694
PinAI	ACCGGT	1 cut(s)	262
PkrI	GCNGC	5 cut(s)	55, 122, 675, 1499, 1771
PleI	GAGTC	2 cut(s)	240, 1738
PpsI	GAGTC	2 cut(s)	240, 1738
PscI	ACATGT	2 cut(s)	369, 861
PshAI	GACNNNNGTC	1 cut(s)	249
Psp6I	CCWGG	2 cut(s)	426, 882
PspGI	CCWGG	2 cut(s)	426, 882
PspN4I	GGNNCC	1 cut(s)	270
PspOMI	GGGCCC	1 cut(s)	268
PspPI	GGNCC	7 cut(s)	244, 268, 269, 430, 530, 880, 1415
PsrI	GAACNNNNNNTAC	2 cut(s)	1355, 1387
PstNI	CAGNNNCTG	1 cut(s)	972
RsaI	GTAC	9 cut(s)	360, 405, 513, 826, 1031, 1246, 1370, 1427, 1511
RsaNI	GTAC	9 cut(s)	359, 404, 512, 825, 1030, 1245, 1369, 1426, 1510
SapI	GCTCTTC	2 cut(s)	583, 782
SaqAI	TTAA	2 cut(s)	723, 1665
SatI	GCNGC	5 cut(s)	54, 121, 674, 1498, 1770
Sau3AI	GATC	5 cut(s)	448, 487, 1501, 1658, 1750
Sau96I	GGNCC	7 cut(s)	244, 268, 269, 430, 530, 880, 1415
ScaI	AGTACT	1 cut(s)	1370
SchI	GAGTC	2 cut(s)	241, 1738
ScrFI	CCNGG	3 cut(s)	272, 428, 884
SduI	GDGCHC	2 cut(s)	272, 369
SexAI	ACCWGGT	1 cut(s)	882
SfaNI	GCATC	4 cut(s)	423, 604, 1124, 1570
SfcI	CTRYAG	1 cut(s)	901
SfuI	TTCGAA	1 cut(s)	310
SinI	GGWCC	4 cut(s)	244, 530, 880, 1415
SmlI	CTYRAG	1 cut(s)	736
SmoI	CTYRAG	1 cut(s)	736
SphI	GCATGC	1 cut(s)	1736
SsiI	CCGC	4 cut(s)	53, 163, 1121, 1185
SspMI	CTAG	4 cut(s)	48, 1004, 1169, 1748
StyD4I	CCNGG	3 cut(s)	270, 426, 882
TaaI	ACNGT	9 cut(s)	345, 457, 516, 604, 771, 955, 974, 1216, 1333
TaiI	ACGT	2 cut(s)	617, 1423
TaqI	TCGA	4 cut(s)	310, 439, 611, 1218
TatI	WGTACW	3 cut(s)	403, 1244, 1368
TauI	GCSGC	1 cut(s)	56
TfiI	GAWTC	5 cut(s)	224, 696, 764, 1013, 1694
Tru1I	TTAA	2 cut(s)	723, 1665
Tru9I	TTAA	2 cut(s)	723, 1665
TscAI	CASTG	6 cut(s)	350, 462, 553, 977, 1105, 1465
TseFI	GTSAC	1 cut(s)	604
TseI	GCWGC	4 cut(s)	120, 673, 1497, 1769
Tsp45I	GTSAC	1 cut(s)	604
TspDTI	ATGAA	9 cut(s)	87, 408, 758, 774, 1005, 1376, 1644, 1689, 1770
TspGWI	ACGGA	1 cut(s)	842
TspRI	CASTG	6 cut(s)	350, 462, 553, 977, 1105, 1465
VpaK11BI	GGWCC	4 cut(s)	244, 530, 880, 1415
XapI	RAATTY	6 cut(s)	5, 89, 467, 685, 1257, 1807
XbaI	TCTAGA	1 cut(s)	1747
XceI	RCATGY	4 cut(s)	373, 626, 865, 1736
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1557
XmiI	GTMKAC	2 cut(s)	948, 957
XmnI	GAANNNNTTC	1 cut(s)	1194
XspI	CTAG	4 cut(s)	48, 1004, 1169, 1748
ZrmI	AGTACT	1 cut(s)	1370

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.