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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G75260 |
| fragaria_vesca | FvH4_2g39641 |
| malus_domestica | MD08G1030100.v1.1 MD15G1025500.v1.1 |
| prunus_persica | Prupe.1G377800_v2.0.a1 |
| pyrus_communis | pycom08g02390 pycom15g02190 |
| rosa_chinensis | RchiOBHm_Chr6g0301251 |
| rosa_laevigata | RLG00000011267 |
| rosa_multiflora | Rmu_sc0013354.1_g000012 |
| rosa_roxburghii | Rroxscaffold_171G00441310 Rroxscaffold_7G00167040 |
| rosa_rugosa | Rorug06G0302700 |
| rosa_samantha | Rh6AG416100 Rh6BG422800 Rh6BG422900 Rh6CG430500 Rh6DG416100 |
| rosa_wichuraiana | Rw6G036030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1840 |
| Acc36I | ACCTGC | 2 cut(s) | 589, 623 |
| Acc65I | GGTACC | 1 cut(s) | 601 |
| AccB1I | GGYRCC | 1 cut(s) | 601 |
| AccII | CGCG | 1 cut(s) | 1461 |
| AciI | CCGC | 3 cut(s) | 1459, 1461, 1824 |
| AcoI | YGGCCR | 3 cut(s) | 149, 1191, 1335 |
| AcsI | RAATTY | 2 cut(s) | 1168, 1527 |
| AcyI | GRCGYC | 1 cut(s) | 1837 |
| AfaI | GTAC | 2 cut(s) | 433, 603 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 135, 173, 745 |
| AflII | CTTAAG | 1 cut(s) | 1414 |
| AgsI | TTSAA | 2 cut(s) | 1656, 1680 |
| AjnI | CCWGG | 3 cut(s) | 793, 1123, 1633 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 1869 |
| Alw21I | GWGCWC | 2 cut(s) | 576, 1238 |
| Alw26I | GTCTC | 3 cut(s) | 267, 336, 681 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 515 |
| Ama87I | CYCGRG | 1 cut(s) | 691 |
| AoxI | GGCC | 6 cut(s) | 137, 149, 197, 702, 1191, 1335 |
| ApoI | RAATTY | 2 cut(s) | 1168, 1527 |
| Asp718I | GGTACC | 1 cut(s) | 601 |
| AsuII | TTCGAA | 2 cut(s) | 1255, 1548 |
| AvaI | CYCGRG | 1 cut(s) | 691 |
| BalI | TGGCCA | 2 cut(s) | 1193, 1337 |
| BanI | GGYRCC | 1 cut(s) | 601 |
| BanII | GRGCYC | 2 cut(s) | 179, 1238 |
| BauI | CACGAG | 3 cut(s) | 225, 848, 950 |
| Bbv12I | GWGCWC | 2 cut(s) | 576, 1238 |
| BbvCI | CCTCAGC | 1 cut(s) | 423 |
| BccI | CCATC | 7 cut(s) | 229, 283, 325, 1255, 1346, 1496, 1679 |
| BceAI | ACGGC | 1 cut(s) | 1784 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 672, 706 |
| BciT130I | CCWGG | 3 cut(s) | 795, 1125, 1635 |
| BcoDI | GTCTC | 3 cut(s) | 267, 336, 681 |
| BfaI | CTAG | 1 cut(s) | 438 |
| BfmI | CTRYAG | 4 cut(s) | 678, 882, 984, 1086 |
| BfrI | CTTAAG | 1 cut(s) | 1414 |
| BfuAI | ACCTGC | 2 cut(s) | 589, 623 |
| BmcAI | AGTACT | 1 cut(s) | 433 |
| Bme1390I | CCNGG | 3 cut(s) | 795, 1125, 1635 |
| BmeT110I | CYCGRG | 1 cut(s) | 691 |
| BmiI | GGNNCC | 2 cut(s) | 35, 603 |
| BmrFI | CCNGG | 3 cut(s) | 795, 1125, 1635 |
| BmrI | ACTGGG | 2 cut(s) | 103, 1284 |
| BmsI | GCATC | 8 cut(s) | 619, 712, 938, 1040, 1176, 1277, 1596, 1763 |
| BmuI | ACTGGG | 2 cut(s) | 103, 1284 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1220, 1252 |
| BpmI | CTGGAG | 2 cut(s) | 801, 1146 |
| Bpu10I | CCTNAGC | 1 cut(s) | 423 |
| Bpu14I | TTCGAA | 2 cut(s) | 1255, 1548 |
| BpuEI | CTTGAG | 2 cut(s) | 1225, 1701 |
| Bsa29I | ATCGAT | 1 cut(s) | 1674 |
| BsaHI | GRCGYC | 1 cut(s) | 1837 |
| BsaJI | CCNNGG | 5 cut(s) | 38, 793, 1320, 1459, 1777 |
| BsaWI | WCCGGW | 1 cut(s) | 30 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 135, 173, 745 |
| Bse1I | ACTGG | 7 cut(s) | 109, 234, 417, 1279, 1390, 1445, 1800 |
| Bse3DI | GCAATG | 6 cut(s) | 647, 725, 827, 1133, 1522, 1582 |
| BseBI | CCWGG | 3 cut(s) | 795, 1125, 1635 |
| BseCI | ATCGAT | 1 cut(s) | 1674 |
| BseDI | CCNNGG | 5 cut(s) | 38, 793, 1320, 1459, 1777 |
| BseGI | GGATG | 2 cut(s) | 289, 1722 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 135, 173, 745 |
| BseMI | GCAATG | 6 cut(s) | 647, 725, 827, 1133, 1522, 1582 |
| BseNI | ACTGG | 7 cut(s) | 109, 234, 417, 1279, 1390, 1445, 1800 |
| BseRI | GAGGAG | 3 cut(s) | 1228, 1246, 1413 |
| BsgI | GTGCAG | 3 cut(s) | 249, 617, 1627 |
| Bsh1236I | CGCG | 1 cut(s) | 1461 |
| BshFI | GGCC | 6 cut(s) | 139, 151, 199, 704, 1193, 1337 |
| BshNI | GGYRCC | 1 cut(s) | 601 |
| BshVI | ATCGAT | 1 cut(s) | 1674 |
| BsiHKAI | GWGCWC | 2 cut(s) | 576, 1238 |
| BsiHKCI | CYCGRG | 1 cut(s) | 691 |
| BsiSI | CCGG | 2 cut(s) | 31, 167 |
| BslFI | GGGAC | 2 cut(s) | 36, 226 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 135, 173, 745 |
| BsmAI | GTCTC | 3 cut(s) | 267, 336, 681 |
| BsmBI | CGTCTC | 2 cut(s) | 267, 336 |
| BsmFI | GGGAC | 2 cut(s) | 36, 226 |
| BsnI | GGCC | 6 cut(s) | 139, 151, 199, 704, 1193, 1337 |
| BsoBI | CYCGRG | 1 cut(s) | 691 |
| Bsp119I | TTCGAA | 2 cut(s) | 1255, 1548 |
| Bsp1286I | GDGCHC | 3 cut(s) | 179, 576, 1238 |
| Bsp143I | GATC | 7 cut(s) | 211, 532, 838, 940, 1042, 1144, 1555 |
| BspACI | CCGC | 3 cut(s) | 1459, 1461, 1824 |
| BspANI | GGCC | 6 cut(s) | 139, 151, 199, 704, 1193, 1337 |
| BspDI | ATCGAT | 1 cut(s) | 1674 |
| BspFNI | CGCG | 1 cut(s) | 1461 |
| BspHI | TCATGA | 2 cut(s) | 460, 1750 |
| BspLI | GGNNCC | 2 cut(s) | 35, 603 |
| BspMAI | CTGCAG | 4 cut(s) | 682, 886, 988, 1090 |
| BspMI | ACCTGC | 2 cut(s) | 589, 623 |
| BspT104I | TTCGAA | 2 cut(s) | 1255, 1548 |
| BspT107I | GGYRCC | 1 cut(s) | 601 |
| BspTI | CTTAAG | 1 cut(s) | 1414 |
| BsrDI | GCAATG | 6 cut(s) | 647, 725, 827, 1133, 1522, 1582 |
| BsrI | ACTGG | 7 cut(s) | 109, 234, 417, 1279, 1390, 1445, 1800 |
| BssECI | CCNNGG | 5 cut(s) | 38, 793, 1320, 1459, 1777 |
| BssMI | GATC | 7 cut(s) | 211, 532, 838, 940, 1042, 1144, 1555 |
| BssNI | GRCGYC | 1 cut(s) | 1837 |
| BssSI | CACGAG | 3 cut(s) | 225, 848, 950 |
| BssT1I | CCWWGG | 3 cut(s) | 38, 1320, 1777 |
| Bst2BI | CACGAG | 3 cut(s) | 225, 848, 950 |
| Bst2UI | CCWGG | 3 cut(s) | 795, 1125, 1635 |
| Bst4CI | ACNGT | 3 cut(s) | 124, 431, 1762 |
| BstACI | GRCGYC | 1 cut(s) | 1837 |
| BstAFI | CTTAAG | 1 cut(s) | 1414 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1351 |
| BstBI | TTCGAA | 2 cut(s) | 1255, 1548 |
| BstC8I | GCNNGC | 8 cut(s) | 153, 189, 732, 936, 1038, 1140, 1191, 1335 |
| BstDSI | CCRYGG | 1 cut(s) | 1459 |
| BstF5I | GGATG | 2 cut(s) | 289, 1722 |
| BstFNI | CGCG | 1 cut(s) | 1461 |
| BstKTI | GATC | 7 cut(s) | 214, 535, 841, 943, 1045, 1147, 1558 |
| BstMAI | GTCTC | 3 cut(s) | 267, 336, 681 |
| BstMBI | GATC | 7 cut(s) | 211, 532, 838, 940, 1042, 1144, 1555 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 731, 935, 1037, 1139, 1351 |
| BstNI | CCWGG | 3 cut(s) | 795, 1125, 1635 |
| BstSCI | CCNGG | 3 cut(s) | 793, 1123, 1633 |
| BstSFI | CTRYAG | 4 cut(s) | 678, 882, 984, 1086 |
| BstUI | CGCG | 1 cut(s) | 1461 |
| Bsu15I | ATCGAT | 1 cut(s) | 1674 |
| BsuRI | GGCC | 6 cut(s) | 139, 151, 199, 704, 1193, 1337 |
| BsuTUI | ATCGAT | 1 cut(s) | 1674 |
| BtgI | CCRYGG | 1 cut(s) | 1459 |
| BtgZI | GCGATG | 3 cut(s) | 915, 1017, 1786 |
| BtsCI | GGATG | 2 cut(s) | 289, 1722 |
| BtsIMutI | CAGTG | 5 cut(s) | 241, 424, 765, 1758, 1807 |
| BveI | ACCTGC | 2 cut(s) | 589, 623 |
| Cac8I | GCNNGC | 8 cut(s) | 153, 189, 732, 936, 1038, 1140, 1191, 1335 |
| CaiI | CAGNNNCTG | 1 cut(s) | 515 |
| CciI | TCATGA | 2 cut(s) | 460, 1750 |
| Cfr42I | CCGCGG | 1 cut(s) | 1462 |
| ClaI | ATCGAT | 1 cut(s) | 1674 |
| Csp6I | GTAC | 2 cut(s) | 432, 602 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1838, 1873 |
| CviAII | CATG | 7 cut(s) | 461, 776, 878, 1082, 1751, 1792, 1841 |
| CviQI | GTAC | 2 cut(s) | 432, 602 |
| DpnI | GATC | 7 cut(s) | 213, 534, 840, 942, 1044, 1146, 1557 |
| DpnII | GATC | 7 cut(s) | 211, 532, 838, 940, 1042, 1144, 1555 |
| EaeI | YGGCCR | 3 cut(s) | 149, 1191, 1335 |
| Ecl136II | GAGCTC | 1 cut(s) | 1236 |
| Eco130I | CCWWGG | 3 cut(s) | 38, 1320, 1777 |
| Eco24I | GRGCYC | 2 cut(s) | 179, 1238 |
| Eco53kI | GAGCTC | 1 cut(s) | 1236 |
| Eco88I | CYCGRG | 1 cut(s) | 691 |
| EcoICRI | GAGCTC | 1 cut(s) | 1236 |
| EcoRII | CCWGG | 3 cut(s) | 793, 1123, 1633 |
| EcoT14I | CCWWGG | 3 cut(s) | 38, 1320, 1777 |
| EcoT22I | ATGCAT | 1 cut(s) | 727 |
| EcoT38I | GRGCYC | 2 cut(s) | 179, 1238 |
| ErhI | CCWWGG | 3 cut(s) | 38, 1320, 1777 |
| Esp3I | CGTCTC | 2 cut(s) | 267, 336 |
| FaeI | CATG | 7 cut(s) | 464, 779, 881, 1085, 1754, 1795, 1844 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 699, 731, 801, 833, 903, 935, 1005, 1037 |
| FaqI | GGGAC | 2 cut(s) | 36, 226 |
| FatI | CATG | 7 cut(s) | 460, 775, 877, 1081, 1750, 1791, 1840 |
| FauI | CCCGC | 1 cut(s) | 1831 |
| FauNDI | CATATG | 1 cut(s) | 1454 |
| FokI | GGATG | 2 cut(s) | 276, 1709 |
| FriOI | GRGCYC | 2 cut(s) | 179, 1238 |
| FspBI | CTAG | 1 cut(s) | 438 |
| GsuI | CTGGAG | 2 cut(s) | 801, 1146 |
| HaeIII | GGCC | 6 cut(s) | 139, 151, 199, 704, 1193, 1337 |
| HapII | CCGG | 2 cut(s) | 31, 167 |
| Hin1I | GRCGYC | 1 cut(s) | 1837 |
| Hin1II | CATG | 7 cut(s) | 464, 779, 881, 1085, 1754, 1795, 1844 |
| HincII | GTYRAC | 1 cut(s) | 114 |
| HindII | GTYRAC | 1 cut(s) | 114 |
| HindIII | AAGCTT | 1 cut(s) | 1742 |
| HpaII | CCGG | 2 cut(s) | 31, 167 |
| Hpy166II | GTNNAC | 2 cut(s) | 114, 1450 |
| Hpy188III | TCNNGA | 8 cut(s) | 461, 693, 897, 999, 1101, 1478, 1582, 1751 |
| Hpy8I | GTNNAC | 2 cut(s) | 114, 1450 |
| Hpy99I | CGWCG | 2 cut(s) | 387, 1839 |
| HpyAV | CCTTC | 3 cut(s) | 192, 1544, 1858 |
| HpyCH4III | ACNGT | 3 cut(s) | 124, 431, 1762 |
| HpyCH4IV | ACGT | 1 cut(s) | 1837 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 731, 935, 1037, 1139, 1351 |
| HpySE526I | ACGT | 1 cut(s) | 1837 |
| Hsp92I | GRCGYC | 1 cut(s) | 1837 |
| Hsp92II | CATG | 7 cut(s) | 464, 779, 881, 1085, 1754, 1795, 1844 |
| KpnI | GGTACC | 1 cut(s) | 605 |
| KspI | CCGCGG | 1 cut(s) | 1462 |
| Kzo9I | GATC | 7 cut(s) | 211, 532, 838, 940, 1042, 1144, 1555 |
| LmnI | GCTCC | 5 cut(s) | 782, 1127, 1233, 1241, 1400 |
| LweI | GCATC | 8 cut(s) | 619, 712, 938, 1040, 1176, 1277, 1596, 1763 |
| MaeI | CTAG | 1 cut(s) | 438 |
| MaeII | ACGT | 1 cut(s) | 1837 |
| MaeIII | GTNAC | 7 cut(s) | 635, 661, 763, 1375, 1463, 1618, 1802 |
| MalI | GATC | 7 cut(s) | 213, 534, 840, 942, 1044, 1146, 1557 |
| MboI | GATC | 7 cut(s) | 211, 532, 838, 940, 1042, 1144, 1555 |
| MboII | GAAGA | 9 cut(s) | 77, 206, 626, 848, 1171, 1322, 1451, 1535, 1644 |
| MhlI | GDGCHC | 3 cut(s) | 179, 576, 1238 |
| MlsI | TGGCCA | 2 cut(s) | 1193, 1337 |
| MluCI | AATT | 3 cut(s) | 254, 1168, 1527 |
| MluNI | TGGCCA | 2 cut(s) | 1193, 1337 |
| Mox20I | TGGCCA | 2 cut(s) | 1193, 1337 |
| Mph1103I | ATGCAT | 1 cut(s) | 727 |
| MscI | TGGCCA | 2 cut(s) | 1193, 1337 |
| MseI | TTAA | 2 cut(s) | 1382, 1415 |
| MslI | CAYNNNNRTG | 1 cut(s) | 459 |
| Msp20I | TGGCCA | 2 cut(s) | 1193, 1337 |
| MspA1I | CMGCKG | 1 cut(s) | 1461 |
| MspCI | CTTAAG | 1 cut(s) | 1414 |
| MspI | CCGG | 2 cut(s) | 31, 167 |
| MspR9I | CCNGG | 3 cut(s) | 795, 1125, 1635 |
| MvaI | CCWGG | 3 cut(s) | 795, 1125, 1635 |
| MvnI | CGCG | 1 cut(s) | 1461 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 731, 935, 1037, 1139, 1351 |
| NdeI | CATATG | 1 cut(s) | 1454 |
| NdeII | GATC | 7 cut(s) | 211, 532, 838, 940, 1042, 1144, 1555 |
| NlaIII | CATG | 7 cut(s) | 464, 779, 881, 1085, 1754, 1795, 1844 |
| NlaIV | GGNNCC | 2 cut(s) | 35, 603 |
| NmuCI | GTSAC | 5 cut(s) | 661, 763, 1375, 1618, 1802 |
| NsiI | ATGCAT | 1 cut(s) | 727 |
| NspV | TTCGAA | 2 cut(s) | 1255, 1548 |
| PagI | TCATGA | 2 cut(s) | 460, 1750 |
| PfeI | GAWTC | 9 cut(s) | 413, 512, 551, 1630, 1667, 1676, 1688, 1754, 1796 |
| Psp124BI | GAGCTC | 1 cut(s) | 1238 |
| Psp6I | CCWGG | 3 cut(s) | 793, 1123, 1633 |
| PspGI | CCWGG | 3 cut(s) | 793, 1123, 1633 |
| PspN4I | GGNNCC | 2 cut(s) | 35, 603 |
| PstI | CTGCAG | 4 cut(s) | 682, 886, 988, 1090 |
| PstNI | CAGNNNCTG | 1 cut(s) | 515 |
| RsaI | GTAC | 2 cut(s) | 433, 603 |
| RsaNI | GTAC | 2 cut(s) | 432, 602 |
| RseI | CAYNNNNRTG | 1 cut(s) | 459 |
| SacI | GAGCTC | 1 cut(s) | 1238 |
| SacII | CCGCGG | 1 cut(s) | 1462 |
| SaqAI | TTAA | 2 cut(s) | 1382, 1415 |
| Sau3AI | GATC | 7 cut(s) | 211, 532, 838, 940, 1042, 1144, 1555 |
| ScaI | AGTACT | 1 cut(s) | 433 |
| ScrFI | CCNGG | 3 cut(s) | 795, 1125, 1635 |
| SduI | GDGCHC | 3 cut(s) | 179, 576, 1238 |
| SfaNI | GCATC | 8 cut(s) | 619, 712, 938, 1040, 1176, 1277, 1596, 1763 |
| SfcI | CTRYAG | 4 cut(s) | 678, 882, 984, 1086 |
| Sfr303I | CCGCGG | 1 cut(s) | 1462 |
| SfuI | TTCGAA | 2 cut(s) | 1255, 1548 |
| SgrBI | CCGCGG | 1 cut(s) | 1462 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 459 |
| SmlI | CTYRAG | 3 cut(s) | 1240, 1414, 1716 |
| SmoI | CTYRAG | 3 cut(s) | 1240, 1414, 1716 |
| Sse9I | AATT | 3 cut(s) | 254, 1168, 1527 |
| SsiI | CCGC | 3 cut(s) | 1459, 1461, 1824 |
| SspMI | CTAG | 1 cut(s) | 438 |
| SstI | GAGCTC | 1 cut(s) | 1238 |
| StyD4I | CCNGG | 3 cut(s) | 793, 1123, 1633 |
| StyI | CCWWGG | 3 cut(s) | 38, 1320, 1777 |
| TaaI | ACNGT | 3 cut(s) | 124, 431, 1762 |
| TaiI | ACGT | 1 cut(s) | 1840 |
| TaqI | TCGA | 7 cut(s) | 382, 1255, 1271, 1533, 1548, 1674, 1834 |
| TasI | AATT | 3 cut(s) | 254, 1168, 1527 |
| TatI | WGTACW | 1 cut(s) | 431 |
| TauI | GCSGC | 1 cut(s) | 1461 |
| TfiI | GAWTC | 9 cut(s) | 413, 512, 551, 1630, 1667, 1676, 1688, 1754, 1796 |
| Tru1I | TTAA | 2 cut(s) | 1382, 1415 |
| Tru9I | TTAA | 2 cut(s) | 1382, 1415 |
| TscAI | CASTG | 5 cut(s) | 241, 424, 772, 1765, 1807 |
| TseFI | GTSAC | 5 cut(s) | 661, 763, 1375, 1618, 1802 |
| Tsp45I | GTSAC | 5 cut(s) | 661, 763, 1375, 1618, 1802 |
| TspDTI | ATGAA | 9 cut(s) | 477, 486, 764, 866, 968, 1070, 1503, 1767, 1780 |
| TspGWI | ACGGA | 1 cut(s) | 1637 |
| TspRI | CASTG | 5 cut(s) | 241, 424, 772, 1765, 1807 |
| Vha464I | CTTAAG | 1 cut(s) | 1414 |
| XapI | RAATTY | 2 cut(s) | 1168, 1527 |
| XspI | CTAG | 1 cut(s) | 438 |
| ZraI | GACGTC | 1 cut(s) | 1838 |
| ZrmI | AGTACT | 1 cut(s) | 433 |
| Zsp2I | ATGCAT | 1 cut(s) | 727 |