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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G75260 |
| fragaria_vesca | FvH4_2g39641 |
| malus_domestica | MD08G1030100.v1.1 MD15G1025500.v1.1 |
| prunus_persica | Prupe.1G377800_v2.0.a1 |
| pyrus_communis | pycom08g02390 pycom15g02190 |
| rosa_chinensis | RchiOBHm_Chr6g0301251 |
| rosa_laevigata | RLG00000011267 |
| rosa_multiflora | Rmu_sc0013354.1_g000012 |
| rosa_roxburghii | Rroxscaffold_171G00441310 Rroxscaffold_7G00167040 |
| rosa_rugosa | Rorug06G0302700 |
| rosa_samantha | Rh6AG416100 Rh6BG422800 Rh6BG422900 Rh6CG430500 Rh6DG416100 |
| rosa_wichuraiana | Rw6G036030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 2041 |
| Acc36I | ACCTGC | 1 cut(s) | 586 |
| Acc65I | GGTACC | 1 cut(s) | 598 |
| AccB1I | GGYRCC | 1 cut(s) | 598 |
| AccII | CGCG | 1 cut(s) | 1662 |
| AciI | CCGC | 5 cut(s) | 581, 1660, 1662, 2025, 2050 |
| AclWI | GGATC | 1 cut(s) | 620 |
| AcoI | YGGCCR | 2 cut(s) | 1392, 1536 |
| AcsI | RAATTY | 2 cut(s) | 1369, 1728 |
| AcyI | GRCGYC | 1 cut(s) | 2038 |
| AfaI | GTAC | 2 cut(s) | 430, 600 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 135, 173, 742 |
| AflII | CTTAAG | 1 cut(s) | 1615 |
| AgsI | TTSAA | 3 cut(s) | 60, 1857, 1881 |
| AjnI | CCWGG | 4 cut(s) | 628, 790, 1324, 1834 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 2070 |
| Alw21I | GWGCWC | 2 cut(s) | 573, 1439 |
| Alw26I | GTCTC | 2 cut(s) | 267, 336 |
| AlwI | GGATC | 1 cut(s) | 620 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 512 |
| Ama87I | CYCGRG | 1 cut(s) | 688 |
| AoxI | GGCC | 4 cut(s) | 137, 699, 1392, 1536 |
| ApoI | RAATTY | 2 cut(s) | 1369, 1728 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1730, 1762 |
| Asp718I | GGTACC | 1 cut(s) | 598 |
| AspS9I | GGNCC | 1 cut(s) | 1738 |
| AsuII | TTCGAA | 2 cut(s) | 1456, 1749 |
| AvaI | CYCGRG | 1 cut(s) | 688 |
| AvaII | GGWCC | 1 cut(s) | 1738 |
| BalI | TGGCCA | 2 cut(s) | 1394, 1538 |
| BanI | GGYRCC | 1 cut(s) | 598 |
| BanII | GRGCYC | 2 cut(s) | 179, 1439 |
| BauI | CACGAG | 6 cut(s) | 456, 845, 947, 1049, 1151, 1253 |
| Bbv12I | GWGCWC | 2 cut(s) | 573, 1439 |
| BccI | CCATC | 7 cut(s) | 229, 283, 325, 1456, 1547, 1697, 1880 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 669, 703 |
| BciT130I | CCWGG | 4 cut(s) | 630, 792, 1326, 1836 |
| BcoDI | GTCTC | 2 cut(s) | 267, 336 |
| BfaI | CTAG | 1 cut(s) | 435 |
| BfmI | CTRYAG | 6 cut(s) | 675, 879, 981, 1083, 1185, 1287 |
| BfrI | CTTAAG | 1 cut(s) | 1615 |
| BfuAI | ACCTGC | 1 cut(s) | 586 |
| BmcAI | AGTACT | 1 cut(s) | 430 |
| Bme1390I | CCNGG | 4 cut(s) | 630, 792, 1326, 1836 |
| Bme18I | GGWCC | 1 cut(s) | 1738 |
| BmeT110I | CYCGRG | 1 cut(s) | 688 |
| BmgT120I | GGNCC | 1 cut(s) | 1738 |
| BmiI | GGNNCC | 2 cut(s) | 35, 600 |
| BmrFI | CCNGG | 4 cut(s) | 630, 792, 1326, 1836 |
| BmrI | ACTGGG | 2 cut(s) | 103, 1485 |
| BmsI | GCATC | 9 cut(s) | 709, 935, 1037, 1139, 1241, 1377, 1478, 1797, 1964 |
| BmuI | ACTGGG | 2 cut(s) | 103, 1485 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1421, 1453 |
| BpmI | CTGGAG | 2 cut(s) | 798, 1347 |
| Bpu10I | CCTNAGC | 1 cut(s) | 192 |
| Bpu14I | TTCGAA | 2 cut(s) | 1456, 1749 |
| BpuEI | CTTGAG | 3 cut(s) | 171, 1426, 1902 |
| Bsa29I | ATCGAT | 1 cut(s) | 1875 |
| BsaHI | GRCGYC | 1 cut(s) | 2038 |
| BsaJI | CCNNGG | 5 cut(s) | 38, 790, 1521, 1660, 1978 |
| BsaWI | WCCGGW | 2 cut(s) | 30, 166 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 135, 173, 742 |
| Bse118I | RCCGGY | 1 cut(s) | 601 |
| Bse1I | ACTGG | 7 cut(s) | 109, 234, 414, 1480, 1565, 1591, 1646 |
| Bse3DI | GCAATG | 6 cut(s) | 644, 722, 824, 1334, 1723, 1783 |
| BseBI | CCWGG | 4 cut(s) | 630, 792, 1326, 1836 |
| BseCI | ATCGAT | 1 cut(s) | 1875 |
| BseDI | CCNNGG | 5 cut(s) | 38, 790, 1521, 1660, 1978 |
| BseGI | GGATG | 2 cut(s) | 289, 1923 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 135, 173, 742 |
| BseMI | GCAATG | 6 cut(s) | 644, 722, 824, 1334, 1723, 1783 |
| BseNI | ACTGG | 7 cut(s) | 109, 234, 414, 1480, 1565, 1591, 1646 |
| BseRI | GAGGAG | 3 cut(s) | 1429, 1447, 1614 |
| BsgI | GTGCAG | 2 cut(s) | 614, 1828 |
| Bsh1236I | CGCG | 1 cut(s) | 1662 |
| BshFI | GGCC | 4 cut(s) | 139, 701, 1394, 1538 |
| BshNI | GGYRCC | 1 cut(s) | 598 |
| BshVI | ATCGAT | 1 cut(s) | 1875 |
| BsiHKAI | GWGCWC | 2 cut(s) | 573, 1439 |
| BsiHKCI | CYCGRG | 1 cut(s) | 688 |
| BsiSI | CCGG | 3 cut(s) | 31, 167, 602 |
| BslFI | GGGAC | 2 cut(s) | 36, 226 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 135, 173, 742 |
| BsmAI | GTCTC | 2 cut(s) | 267, 336 |
| BsmBI | CGTCTC | 2 cut(s) | 267, 336 |
| BsmFI | GGGAC | 2 cut(s) | 36, 226 |
| BsnI | GGCC | 4 cut(s) | 139, 701, 1394, 1538 |
| BsoBI | CYCGRG | 1 cut(s) | 688 |
| Bsp119I | TTCGAA | 2 cut(s) | 1456, 1749 |
| Bsp1286I | GDGCHC | 3 cut(s) | 179, 573, 1439 |
| BspACI | CCGC | 5 cut(s) | 581, 1660, 1662, 2025, 2050 |
| BspANI | GGCC | 4 cut(s) | 139, 701, 1394, 1538 |
| BspDI | ATCGAT | 1 cut(s) | 1875 |
| BspFNI | CGCG | 1 cut(s) | 1662 |
| BspHI | TCATGA | 1 cut(s) | 1951 |
| BspLI | GGNNCC | 2 cut(s) | 35, 600 |
| BspMAI | CTGCAG | 6 cut(s) | 679, 883, 985, 1087, 1189, 1291 |
| BspMI | ACCTGC | 1 cut(s) | 586 |
| BspPI | GGATC | 1 cut(s) | 620 |
| BspT104I | TTCGAA | 2 cut(s) | 1456, 1749 |
| BspT107I | GGYRCC | 1 cut(s) | 598 |
| BspTI | CTTAAG | 1 cut(s) | 1615 |
| BsrDI | GCAATG | 6 cut(s) | 644, 722, 824, 1334, 1723, 1783 |
| BsrFI | RCCGGY | 1 cut(s) | 601 |
| BsrI | ACTGG | 7 cut(s) | 109, 234, 414, 1480, 1565, 1591, 1646 |
| BssAI | RCCGGY | 1 cut(s) | 601 |
| BssECI | CCNNGG | 5 cut(s) | 38, 790, 1521, 1660, 1978 |
| BssNI | GRCGYC | 1 cut(s) | 2038 |
| BssSI | CACGAG | 6 cut(s) | 456, 845, 947, 1049, 1151, 1253 |
| BssT1I | CCWWGG | 3 cut(s) | 38, 1521, 1978 |
| Bst2BI | CACGAG | 6 cut(s) | 456, 845, 947, 1049, 1151, 1253 |
| Bst2UI | CCWGG | 4 cut(s) | 630, 792, 1326, 1836 |
| Bst4CI | ACNGT | 3 cut(s) | 124, 428, 1963 |
| BstACI | GRCGYC | 1 cut(s) | 2038 |
| BstAFI | CTTAAG | 1 cut(s) | 1615 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1552 |
| BstBI | TTCGAA | 2 cut(s) | 1456, 1749 |
| BstDSI | CCRYGG | 1 cut(s) | 1660 |
| BstF5I | GGATG | 2 cut(s) | 289, 1923 |
| BstFNI | CGCG | 1 cut(s) | 1662 |
| BstMAI | GTCTC | 2 cut(s) | 267, 336 |
| BstNI | CCWGG | 4 cut(s) | 630, 792, 1326, 1836 |
| BstSCI | CCNGG | 4 cut(s) | 628, 790, 1324, 1834 |
| BstSFI | CTRYAG | 6 cut(s) | 675, 879, 981, 1083, 1185, 1287 |
| BstUI | CGCG | 1 cut(s) | 1662 |
| Bsu15I | ATCGAT | 1 cut(s) | 1875 |
| BsuRI | GGCC | 4 cut(s) | 139, 701, 1394, 1538 |
| BsuTUI | ATCGAT | 1 cut(s) | 1875 |
| BtgI | CCRYGG | 1 cut(s) | 1660 |
| BtgZI | GCGATG | 5 cut(s) | 912, 1014, 1116, 1218, 1987 |
| BtsCI | GGATG | 2 cut(s) | 289, 1923 |
| BtsIMutI | CAGTG | 4 cut(s) | 241, 421, 762, 1959 |
| BveI | ACCTGC | 1 cut(s) | 586 |
| CaiI | CAGNNNCTG | 1 cut(s) | 512 |
| CciI | TCATGA | 1 cut(s) | 1951 |
| Cfr10I | RCCGGY | 1 cut(s) | 601 |
| Cfr13I | GGNCC | 1 cut(s) | 1738 |
| Cfr42I | CCGCGG | 1 cut(s) | 1663 |
| ClaI | ATCGAT | 1 cut(s) | 1875 |
| Csp6I | GTAC | 2 cut(s) | 429, 599 |
| CviAII | CATG | 8 cut(s) | 227, 773, 875, 1079, 1283, 1952, 1993, 2042 |
| CviQI | GTAC | 2 cut(s) | 429, 599 |
| EaeI | YGGCCR | 2 cut(s) | 1392, 1536 |
| Ecl136II | GAGCTC | 1 cut(s) | 1437 |
| Eco130I | CCWWGG | 3 cut(s) | 38, 1521, 1978 |
| Eco24I | GRGCYC | 2 cut(s) | 179, 1439 |
| Eco47I | GGWCC | 1 cut(s) | 1738 |
| Eco53kI | GAGCTC | 1 cut(s) | 1437 |
| Eco88I | CYCGRG | 1 cut(s) | 688 |
| EcoICRI | GAGCTC | 1 cut(s) | 1437 |
| EcoRII | CCWGG | 4 cut(s) | 628, 790, 1324, 1834 |
| EcoT14I | CCWWGG | 3 cut(s) | 38, 1521, 1978 |
| EcoT22I | ATGCAT | 1 cut(s) | 724 |
| EcoT38I | GRGCYC | 2 cut(s) | 179, 1439 |
| ErhI | CCWWGG | 3 cut(s) | 38, 1521, 1978 |
| Esp3I | CGTCTC | 2 cut(s) | 267, 336 |
| FaeI | CATG | 8 cut(s) | 230, 776, 878, 1082, 1286, 1955, 1996, 2045 |
| FaqI | GGGAC | 2 cut(s) | 36, 226 |
| FatI | CATG | 8 cut(s) | 226, 772, 874, 1078, 1282, 1951, 1992, 2041 |
| FauI | CCCGC | 1 cut(s) | 2032 |
| FauNDI | CATATG | 1 cut(s) | 1655 |
| FokI | GGATG | 2 cut(s) | 276, 1910 |
| FriOI | GRGCYC | 2 cut(s) | 179, 1439 |
| FspBI | CTAG | 1 cut(s) | 435 |
| GsuI | CTGGAG | 2 cut(s) | 798, 1347 |
| HaeIII | GGCC | 4 cut(s) | 139, 701, 1394, 1538 |
| HapII | CCGG | 3 cut(s) | 31, 167, 602 |
| Hin1I | GRCGYC | 1 cut(s) | 2038 |
| Hin1II | CATG | 8 cut(s) | 230, 776, 878, 1082, 1286, 1955, 1996, 2045 |
| HincII | GTYRAC | 1 cut(s) | 114 |
| HindII | GTYRAC | 1 cut(s) | 114 |
| HindIII | AAGCTT | 1 cut(s) | 1943 |
| HpaII | CCGG | 3 cut(s) | 31, 167, 602 |
| Hpy166II | GTNNAC | 2 cut(s) | 114, 1651 |
| Hpy8I | GTNNAC | 2 cut(s) | 114, 1651 |
| Hpy99I | CGWCG | 2 cut(s) | 387, 2040 |
| HpyAV | CCTTC | 3 cut(s) | 1745, 1962, 2059 |
| HpyCH4III | ACNGT | 3 cut(s) | 124, 428, 1963 |
| HpyCH4IV | ACGT | 1 cut(s) | 2038 |
| HpySE526I | ACGT | 1 cut(s) | 2038 |
| Hsp92I | GRCGYC | 1 cut(s) | 2038 |
| Hsp92II | CATG | 8 cut(s) | 230, 776, 878, 1082, 1286, 1955, 1996, 2045 |
| KpnI | GGTACC | 1 cut(s) | 602 |
| KspI | CCGCGG | 1 cut(s) | 1663 |
| LmnI | GCTCC | 5 cut(s) | 779, 1328, 1434, 1442, 1601 |
| LweI | GCATC | 9 cut(s) | 709, 935, 1037, 1139, 1241, 1377, 1478, 1797, 1964 |
| MaeI | CTAG | 1 cut(s) | 435 |
| MaeII | ACGT | 1 cut(s) | 2038 |
| MaeIII | GTNAC | 7 cut(s) | 198, 632, 658, 760, 1576, 1664, 1819 |
| MboII | GAAGA | 8 cut(s) | 77, 206, 623, 1372, 1523, 1652, 1736, 1845 |
| MhlI | GDGCHC | 3 cut(s) | 179, 573, 1439 |
| MlsI | TGGCCA | 2 cut(s) | 1394, 1538 |
| MluCI | AATT | 2 cut(s) | 1369, 1728 |
| MluNI | TGGCCA | 2 cut(s) | 1394, 1538 |
| Mox20I | TGGCCA | 2 cut(s) | 1394, 1538 |
| Mph1103I | ATGCAT | 1 cut(s) | 724 |
| MscI | TGGCCA | 2 cut(s) | 1394, 1538 |
| MseI | TTAA | 2 cut(s) | 1583, 1616 |
| MslI | CAYNNNNRTG | 1 cut(s) | 456 |
| Msp20I | TGGCCA | 2 cut(s) | 1394, 1538 |
| MspA1I | CMGCKG | 1 cut(s) | 1662 |
| MspCI | CTTAAG | 1 cut(s) | 1615 |
| MspI | CCGG | 3 cut(s) | 31, 167, 602 |
| MspR9I | CCNGG | 4 cut(s) | 630, 792, 1326, 1836 |
| MvaI | CCWGG | 4 cut(s) | 630, 792, 1326, 1836 |
| MvnI | CGCG | 1 cut(s) | 1662 |
| NdeI | CATATG | 1 cut(s) | 1655 |
| NlaIII | CATG | 8 cut(s) | 230, 776, 878, 1082, 1286, 1955, 1996, 2045 |
| NlaIV | GGNNCC | 2 cut(s) | 35, 600 |
| NmuCI | GTSAC | 5 cut(s) | 198, 658, 760, 1576, 1819 |
| NsiI | ATGCAT | 1 cut(s) | 724 |
| NspV | TTCGAA | 2 cut(s) | 1456, 1749 |
| PagI | TCATGA | 1 cut(s) | 1951 |
| PfeI | GAWTC | 9 cut(s) | 410, 509, 548, 1831, 1868, 1877, 1889, 1955, 1997 |
| Psp124BI | GAGCTC | 1 cut(s) | 1439 |
| Psp6I | CCWGG | 4 cut(s) | 628, 790, 1324, 1834 |
| PspGI | CCWGG | 4 cut(s) | 628, 790, 1324, 1834 |
| PspN4I | GGNNCC | 2 cut(s) | 35, 600 |
| PspPI | GGNCC | 1 cut(s) | 1738 |
| PstI | CTGCAG | 6 cut(s) | 679, 883, 985, 1087, 1189, 1291 |
| PstNI | CAGNNNCTG | 1 cut(s) | 512 |
| RsaI | GTAC | 2 cut(s) | 430, 600 |
| RsaNI | GTAC | 2 cut(s) | 429, 599 |
| RseI | CAYNNNNRTG | 1 cut(s) | 456 |
| SacI | GAGCTC | 1 cut(s) | 1439 |
| SacII | CCGCGG | 1 cut(s) | 1663 |
| SaqAI | TTAA | 2 cut(s) | 1583, 1616 |
| Sau96I | GGNCC | 1 cut(s) | 1738 |
| ScaI | AGTACT | 1 cut(s) | 430 |
| ScrFI | CCNGG | 4 cut(s) | 630, 792, 1326, 1836 |
| SduI | GDGCHC | 3 cut(s) | 179, 573, 1439 |
| SfaNI | GCATC | 9 cut(s) | 709, 935, 1037, 1139, 1241, 1377, 1478, 1797, 1964 |
| SfcI | CTRYAG | 6 cut(s) | 675, 879, 981, 1083, 1185, 1287 |
| Sfr303I | CCGCGG | 1 cut(s) | 1663 |
| SfuI | TTCGAA | 2 cut(s) | 1456, 1749 |
| SgrBI | CCGCGG | 1 cut(s) | 1663 |
| SinI | GGWCC | 1 cut(s) | 1738 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 456 |
| SmlI | CTYRAG | 4 cut(s) | 186, 1441, 1615, 1917 |
| SmoI | CTYRAG | 4 cut(s) | 186, 1441, 1615, 1917 |
| Sse9I | AATT | 2 cut(s) | 1369, 1728 |
| SsiI | CCGC | 5 cut(s) | 581, 1660, 1662, 2025, 2050 |
| SspMI | CTAG | 1 cut(s) | 435 |
| SstI | GAGCTC | 1 cut(s) | 1439 |
| StyD4I | CCNGG | 4 cut(s) | 628, 790, 1324, 1834 |
| StyI | CCWWGG | 3 cut(s) | 38, 1521, 1978 |
| TaaI | ACNGT | 3 cut(s) | 124, 428, 1963 |
| TaiI | ACGT | 1 cut(s) | 2041 |
| TaqI | TCGA | 7 cut(s) | 382, 1456, 1472, 1734, 1749, 1875, 2035 |
| TasI | AATT | 2 cut(s) | 1369, 1728 |
| TatI | WGTACW | 1 cut(s) | 428 |
| TauI | GCSGC | 2 cut(s) | 1662, 2052 |
| TfiI | GAWTC | 9 cut(s) | 410, 509, 548, 1831, 1868, 1877, 1889, 1955, 1997 |
| Tru1I | TTAA | 2 cut(s) | 1583, 1616 |
| Tru9I | TTAA | 2 cut(s) | 1583, 1616 |
| TscAI | CASTG | 4 cut(s) | 241, 421, 769, 1966 |
| TseFI | GTSAC | 5 cut(s) | 198, 658, 760, 1576, 1819 |
| Tsp45I | GTSAC | 5 cut(s) | 198, 658, 760, 1576, 1819 |
| TspGWI | ACGGA | 1 cut(s) | 1838 |
| TspRI | CASTG | 4 cut(s) | 241, 421, 769, 1966 |
| Vha464I | CTTAAG | 1 cut(s) | 1615 |
| VpaK11BI | GGWCC | 1 cut(s) | 1738 |
| XapI | RAATTY | 2 cut(s) | 1369, 1728 |
| XspI | CTAG | 1 cut(s) | 435 |
| ZraI | GACGTC | 1 cut(s) | 2039 |
| ZrmI | AGTACT | 1 cut(s) | 430 |
| Zsp2I | ATGCAT | 1 cut(s) | 724 |