Rh6CG488500

triglyceride lipase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0005988
Physical Location & Seq
Reverse (-)
65622893 .. 65623297
405 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG488500.1

Sequence Viewer

Length: 405 bp
ATGCTGAAAGATTTACTGCAAGAGGATGAGAATGCCAAGTTTATATTGACGGGGCACAGCTTGGGCGGGGCGTTGGCGATTTTGTTTGCCAGGGTGCTAGCAATGCATGACTGTGAGTATGCCTGGTTGCTGGAGAGGTTGGAGGGGGTTTACACGTTCGGACAGCCTAGGGTTGGAGATGGGAAGTTTGGGGTGTTTATGAAGGAAAAGTTTAGGAAATATGATGTGAGATACATGAGGTATGTTTACAGCAATGACCTGGTGCCTAGAATACCTTATGATGATAAAGCCCTCATGTTCAAGCACTTCGGGTCAAGTCTTTACTACAACAGCTGCTATAGAGGAAAGGTCAGTCTTTCTCTTATCTCGCTCTCTGAACATGTAGTAGTACTTAGGGGTGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576 GO:0005615 GO:0044421
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lipase_3

Protein Analysis

134

Amino Acids

15.45

Weight (kDa)

8.83

Isoelectric Point (pI)

30.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipase_3 PF01764 2 - 94 5.1e-24 Lipase (class 3)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 262
AciI CCGC 1 cut(s) 66
AfaI GTAC 1 cut(s) 390
AfiI CCNNNNNNNGG 1 cut(s) 173
AflIII ACRYGT 2 cut(s) 153, 379
AgsI TTSAA 1 cut(s) 301
AjnI CCWGG 3 cut(s) 89, 122, 258
AluBI AGCT 2 cut(s) 60, 333
AluI AGCT 2 cut(s) 60, 333
ApeKI GCWGC 1 cut(s) 333
AspA2I CCTAGG 1 cut(s) 167
AsuNHI GCTAGC 1 cut(s) 97
AvrII CCTAGG 1 cut(s) 167
BaeGI GKGCMC 1 cut(s) 57
BanI GGYRCC 1 cut(s) 262
BbvI GCAGC 1 cut(s) 320
BccI CCATC 1 cut(s) 173
BciT130I CCWGG 3 cut(s) 91, 124, 260
BfaI CTAG 3 cut(s) 98, 168, 267
BfmI CTRYAG 1 cut(s) 337
BisI GCNGC 1 cut(s) 334
BlnI CCTAGG 1 cut(s) 167
BlsI GCNGC 1 cut(s) 335
BmcAI AGTACT 1 cut(s) 390
Bme1390I CCNGG 3 cut(s) 91, 124, 260
BmiI GGNNCC 1 cut(s) 264
BmrFI CCNGG 3 cut(s) 91, 124, 260
BmtI GCTAGC 1 cut(s) 101
BpmI CTGGAG 1 cut(s) 152
BsaJI CCNNGG 2 cut(s) 90, 167
Bsc4I CCNNNNNNNGG 1 cut(s) 173
Bse3DI GCAATG 2 cut(s) 108, 259
BseBI CCWGG 3 cut(s) 91, 124, 260
BseDI CCNNGG 2 cut(s) 90, 167
BseGI GGATG 1 cut(s) 31
BseLI CCNNNNNNNGG 1 cut(s) 173
BseMI GCAATG 2 cut(s) 108, 259
BseSI GKGCMC 1 cut(s) 57
BseXI GCAGC 1 cut(s) 320
BshNI GGYRCC 1 cut(s) 262
BslI CCNNNNNNNGG 1 cut(s) 173
BsmI GAATGC 1 cut(s) 37
Bsp1286I GDGCHC 1 cut(s) 57
BspACI CCGC 1 cut(s) 66
BspLI GGNNCC 1 cut(s) 264
BspOI GCTAGC 1 cut(s) 101
BspT107I GGYRCC 1 cut(s) 262
BsrDI GCAATG 2 cut(s) 108, 259
BssECI CCNNGG 2 cut(s) 90, 167
BssT1I CCWWGG 1 cut(s) 167
Bst2UI CCWGG 3 cut(s) 91, 124, 260
Bst4CI ACNGT 1 cut(s) 113
BstC8I GCNNGC 1 cut(s) 99
BstDEI CTNAG 1 cut(s) 392
BstF5I GGATG 1 cut(s) 31
BstMWI GCNNNNNNNGC 1 cut(s) 103
BstNI CCWGG 3 cut(s) 91, 124, 260
BstNSI RCATGY 1 cut(s) 383
BstSCI CCNGG 3 cut(s) 89, 122, 258
BstSFI CTRYAG 1 cut(s) 337
BstSLI GKGCMC 1 cut(s) 57
BstV1I GCAGC 1 cut(s) 320
BtsCI GGATG 1 cut(s) 31
Cac8I GCNNGC 1 cut(s) 99
CsiI ACCWGGT 1 cut(s) 258
Csp6I GTAC 1 cut(s) 389
CviAII CATG 4 cut(s) 107, 235, 295, 380
CviJI RGCY 5 cut(s) 60, 166, 290, 333, 402
CviKI_1 RGCY 5 cut(s) 60, 166, 290, 333, 402
CviQI GTAC 1 cut(s) 389
DdeI CTNAG 1 cut(s) 392
Eco130I CCWWGG 1 cut(s) 167
EcoRII CCWGG 3 cut(s) 89, 122, 258
EcoT14I CCWWGG 1 cut(s) 167
EcoT22I ATGCAT 1 cut(s) 108
ErhI CCWWGG 1 cut(s) 167
FaeI CATG 4 cut(s) 110, 238, 298, 383
FatI CATG 4 cut(s) 106, 234, 294, 379
FauI CCCGC 1 cut(s) 59
Fnu4HI GCNGC 1 cut(s) 334
FokI GGATG 1 cut(s) 38
Fsp4HI GCNGC 1 cut(s) 334
FspBI CTAG 3 cut(s) 98, 168, 267
GluI GCNGC 1 cut(s) 334
GsuI CTGGAG 1 cut(s) 152
Hin1II CATG 4 cut(s) 110, 238, 298, 383
Hpy166II GTNNAC 2 cut(s) 151, 247
Hpy188I TCNGA 2 cut(s) 161, 376
Hpy8I GTNNAC 2 cut(s) 151, 247
HpyAV CCTTC 1 cut(s) 196
HpyCH4III ACNGT 1 cut(s) 113
HpyCH4IV ACGT 1 cut(s) 155
HpyCH4V TGCA 2 cut(s) 19, 106
HpyF10VI GCNNNNNNNGC 1 cut(s) 103
HpyF3I CTNAG 1 cut(s) 392
HpySE526I ACGT 1 cut(s) 155
Hsp92II CATG 4 cut(s) 110, 238, 298, 383
LpnPI CCDG 7 cut(s) 76, 103, 109, 116, 136, 245, 272
Lsp1109I GCAGC 1 cut(s) 320
MabI ACCWGGT 1 cut(s) 258
MaeI CTAG 3 cut(s) 98, 168, 267
MaeII ACGT 1 cut(s) 155
MhlI GDGCHC 1 cut(s) 57
MmeI TCCRAC 2 cut(s) 120, 154
MnlI CCTC 6 cut(s) 16, 129, 136, 231, 302, 335
Mph1103I ATGCAT 1 cut(s) 108
MslI CAYNNNNRTG 1 cut(s) 111
MspA1I CMGCKG 1 cut(s) 333
MspR9I CCNGG 3 cut(s) 91, 124, 260
Mva1269I GAATGC 1 cut(s) 37
MvaI CCWGG 3 cut(s) 91, 124, 260
MwoI GCNNNNNNNGC 1 cut(s) 103
NheI GCTAGC 1 cut(s) 97
NlaIII CATG 4 cut(s) 110, 238, 298, 383
NlaIV GGNNCC 1 cut(s) 264
NsiI ATGCAT 1 cut(s) 108
NspI RCATGY 1 cut(s) 383
PciI ACATGT 1 cut(s) 379
PctI GAATGC 1 cut(s) 37
PkrI GCNGC 1 cut(s) 335
PscI ACATGT 1 cut(s) 379
Psp6I CCWGG 3 cut(s) 89, 122, 258
PspGI CCWGG 3 cut(s) 89, 122, 258
PspN4I GGNNCC 1 cut(s) 264
PvuII CAGCTG 1 cut(s) 333
RsaI GTAC 1 cut(s) 390
RsaNI GTAC 1 cut(s) 389
RseI CAYNNNNRTG 1 cut(s) 111
SatI GCNGC 1 cut(s) 334
ScaI AGTACT 1 cut(s) 390
ScrFI CCNGG 3 cut(s) 91, 124, 260
SduI GDGCHC 1 cut(s) 57
SetI ASST 8 cut(s) 62, 140, 158, 242, 261, 277, 335, 351
SexAI ACCWGGT 1 cut(s) 258
SfcI CTRYAG 1 cut(s) 337
SmiMI CAYNNNNRTG 1 cut(s) 111
SsiI CCGC 1 cut(s) 66
SspMI CTAG 3 cut(s) 98, 168, 267
StyD4I CCNGG 3 cut(s) 89, 122, 258
StyI CCWWGG 1 cut(s) 167
TaaI ACNGT 1 cut(s) 113
TaiI ACGT 1 cut(s) 158
TatI WGTACW 1 cut(s) 388
TseI GCWGC 1 cut(s) 333
TspDTI ATGAA 1 cut(s) 215
XceI RCATGY 1 cut(s) 383
XmaJI CCTAGG 1 cut(s) 167
XspI CTAG 3 cut(s) 98, 168, 267
ZrmI AGTACT 1 cut(s) 390
Zsp2I ATGCAT 1 cut(s) 108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.