F-box LRR-repeat protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0154631 |
| rosa_laevigata | RLG00000010506 RLG00000010507 RLG00000025526 |
| rosa_multiflora | Rmu_sc0000294.1_g000033 Rmu_sc0008163.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00328900 |
| rosa_rugosa | Rorug06G0377700 |
| rosa_samantha | Rh1CG092400 Rh2BG520800 Rh3AG309700 Rh6BG501100 Rh6CG506200 Rh6DG492200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 109 |
| AciI | CCGC | 1 cut(s) | 378 |
| AcsI | RAATTY | 2 cut(s) | 22, 78 |
| AcuI | CTGAAG | 1 cut(s) | 353 |
| AfaI | GTAC | 1 cut(s) | 263 |
| AgsI | TTSAA | 4 cut(s) | 22, 83, 319, 355 |
| Alw26I | GTCTC | 1 cut(s) | 127 |
| ApoI | RAATTY | 2 cut(s) | 22, 78 |
| BbsI | GAAGAC | 1 cut(s) | 21 |
| BccI | CCATC | 1 cut(s) | 23 |
| BcoDI | GTCTC | 1 cut(s) | 127 |
| BfaI | CTAG | 1 cut(s) | 397 |
| BpiI | GAAGAC | 1 cut(s) | 21 |
| BpuEI | CTTGAG | 2 cut(s) | 74, 124 |
| BsaI | GGTCTC | 1 cut(s) | 127 |
| Bse3DI | GCAATG | 1 cut(s) | 366 |
| BseGI | GGATG | 2 cut(s) | 34, 38 |
| BseMI | GCAATG | 1 cut(s) | 366 |
| BseMII | CTCAG | 1 cut(s) | 141 |
| BsmAI | GTCTC | 1 cut(s) | 127 |
| Bso31I | GGTCTC | 1 cut(s) | 127 |
| BspACI | CCGC | 1 cut(s) | 378 |
| BspCNI | CTCAG | 1 cut(s) | 142 |
| BspTNI | GGTCTC | 1 cut(s) | 127 |
| BsrDI | GCAATG | 1 cut(s) | 366 |
| Bst6I | CTCTTC | 1 cut(s) | 314 |
| BstDEI | CTNAG | 3 cut(s) | 10, 150, 295 |
| BstF5I | GGATG | 2 cut(s) | 34, 38 |
| BstMAI | GTCTC | 1 cut(s) | 127 |
| BstV2I | GAAGAC | 1 cut(s) | 21 |
| BtsCI | GGATG | 2 cut(s) | 34, 38 |
| Csp6I | GTAC | 1 cut(s) | 262 |
| CviJI | RGCY | 1 cut(s) | 280 |
| CviKI_1 | RGCY | 1 cut(s) | 280 |
| CviQI | GTAC | 1 cut(s) | 262 |
| DdeI | CTNAG | 3 cut(s) | 10, 150, 295 |
| Eam1104I | CTCTTC | 1 cut(s) | 314 |
| EarI | CTCTTC | 1 cut(s) | 314 |
| Eco31I | GGTCTC | 1 cut(s) | 127 |
| Eco57I | CTGAAG | 1 cut(s) | 353 |
| EcoRI | GAATTC | 1 cut(s) | 78 |
| FaiI | YATR | 3 cut(s) | 117, 137, 207 |
| FblI | GTMKAC | 1 cut(s) | 109 |
| FokI | GGATG | 2 cut(s) | 41, 45 |
| FspBI | CTAG | 1 cut(s) | 397 |
| HincII | GTYRAC | 2 cut(s) | 110, 349 |
| HindII | GTYRAC | 2 cut(s) | 110, 349 |
| HinfI | GANTC | 2 cut(s) | 106, 242 |
| Hpy166II | GTNNAC | 2 cut(s) | 110, 349 |
| Hpy188I | TCNGA | 1 cut(s) | 127 |
| Hpy188III | TCNNGA | 2 cut(s) | 75, 91 |
| Hpy8I | GTNNAC | 2 cut(s) | 110, 349 |
| HpyAV | CCTTC | 1 cut(s) | 349 |
| HpyCH4V | TGCA | 1 cut(s) | 115 |
| HpyF3I | CTNAG | 3 cut(s) | 10, 150, 295 |
| LpnPI | CCDG | 3 cut(s) | 60, 217, 378 |
| MaeI | CTAG | 1 cut(s) | 397 |
| MaeIII | GTNAC | 2 cut(s) | 196, 227 |
| MboII | GAAGA | 3 cut(s) | 26, 331, 346 |
| MluCI | AATT | 5 cut(s) | 22, 78, 95, 154, 381 |
| MlyI | GAGTC | 1 cut(s) | 115 |
| MmeI | TCCRAC | 1 cut(s) | 150 |
| MnlI | CCTC | 3 cut(s) | 98, 163, 381 |
| MseI | TTAA | 1 cut(s) | 98 |
| NmuCI | GTSAC | 1 cut(s) | 227 |
| PfeI | GAWTC | 1 cut(s) | 242 |
| PleI | GAGTC | 1 cut(s) | 114 |
| PpsI | GAGTC | 1 cut(s) | 114 |
| RsaI | GTAC | 1 cut(s) | 263 |
| RsaNI | GTAC | 1 cut(s) | 262 |
| SalI | GTCGAC | 1 cut(s) | 108 |
| SaqAI | TTAA | 1 cut(s) | 98 |
| SchI | GAGTC | 1 cut(s) | 115 |
| SetI | ASST | 5 cut(s) | 123, 174, 198, 236, 392 |
| SmlI | CTYRAG | 2 cut(s) | 89, 103 |
| SmoI | CTYRAG | 2 cut(s) | 89, 103 |
| Sse9I | AATT | 5 cut(s) | 22, 78, 95, 154, 381 |
| SsiI | CCGC | 1 cut(s) | 378 |
| SspMI | CTAG | 1 cut(s) | 397 |
| TaqI | TCGA | 1 cut(s) | 109 |
| TaqII | GACCGA | 1 cut(s) | 215 |
| TasI | AATT | 5 cut(s) | 22, 78, 95, 154, 381 |
| TfiI | GAWTC | 1 cut(s) | 242 |
| Tru1I | TTAA | 1 cut(s) | 98 |
| Tru9I | TTAA | 1 cut(s) | 98 |
| TseFI | GTSAC | 1 cut(s) | 227 |
| Tsp45I | GTSAC | 1 cut(s) | 227 |
| TspDTI | ATGAA | 1 cut(s) | 257 |
| XapI | RAATTY | 2 cut(s) | 22, 78 |
| XmiI | GTMKAC | 1 cut(s) | 109 |
| XspI | CTAG | 1 cut(s) | 397 |