Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0008101

Physical Location & Seq

Genomic Coordinates Reverse (-)

703376 .. 705295

Gene Structure 1920 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG006400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1920 bp

ATGATAAGACTACGTTCTTGTTCATCGTCGTCTCTGCTCTACTTTCACTTAAATTTCAGAACCAGATGTTTATTCTTCTCCCATCAAATTCAAAAACCACAATGTATCTACAAGCTCTTCACCCAGAAAACATTTCACAATGCACTTCTTCCTCACTCATCTTTCCAATTTCGCACACATTCAAACTCGGACATTCTTCTTTCCGCTCTGATTTCTGCTATAAGCTCGTGCTCTTCTGTCTCCTATGGCCGTGCCATTCACGCATGGGTAATCAAGTCTTACAATTATAGTGATGGGTTCATCGGCGATCAGCTGGTTTCGTGTTATGCTAAGATGGGTTTTGCTGTAGATGCACTCAACCTGTTCGATGAAATGCCCAAGAAGGACTTGGTCTCCTGGAATTCTTTGATTTCCGGGTTTTCGCGAAGAGGGTATGTGGATAAATGCTTGAGTGCGCTAATTAGGATGAAGTTTGAAAAGGGAATAGAACCCAATGAGGTTACGCTTATATCTGTAGTTTCAGCTTGTGCTAGCAGTGGAGCTGTTGATGAAGGCATGTACATTCATGGATTTGCACTGAAATTGGGTGTGCTGTGGGAACCAAAGCTTGTTAATTCTCTGATTAATCTGTATGGAAAGTCAGGCTATTTGGATGCAGTATGTCGATTAGTTGAGACTATGCCGATACAGAATGTAGTGTCATGGAATTTAATGATTGCAATTTACGCTCAAAATGGATCTGCAGCGGAGGGGTTGAATTGCTTTAATCTCATGAGAAGGGCTGGAGTTTATCCTGATGATGGTACTCTTGTGTCTTTGCTTCAAGTTTGCGAGAATTTAGGTTTAGGGAATCTAGCACAGGGCGTCCATGGTTTAATTATCAAGTGTGGTCTTCGTGCAAATGTCAGAGTTGCAACGGGAGTTCTAGATTTGTATACGAAGTTGGGGCGATTAGATTATTCACTTAAGGTTTTCAAGGAGGTAATTGATCCGGATAAAGTAGCTTGGACTGCAATGCTTGCAGGTTATGCCACGCATGGGTATGGACGAGAAGCTATGGAGATCTTTGAAAGCATGGTTAGGAAAGGTGTGCAGTCTGATCACGTCACCTTCACTCACTTGTTAAGTGCTTGTAGCCATTCAGGACTAATTAAGGAAGGGAGGAATTACTTCAACATTATGTCTGAAGTTTATGGAGTAGAGCCTAGGTTGGATCACTATTCATGCAGGGTTGATCTTCTGGGTCGCTCTGGACTTCTGAATGATGCTAACGAGCTGATTAAACGAATGCCAATGGAGCCAAACTCTGGTGTATGGGGGGCTCTTTTCAGTTCTTGTAGGGTTTATGGTAATATTGAACTTGGGAAGGCAGTTGCAGAGAGATTATTTGCTTTAGAGCCATCTGATTCCAGAAATTTTATCATGCTATCAAATATGTACTCTGCAGCTGGTTTATGGAGGGATGCTTCAAAGGTGAGGGCTTTGATGAAGGAGAAAGGTCTCGCGAGAAACCCCGGATGCAGTTTTATTGAATATGGAAATAAAATTCATCGCTTTGTTGTGGGTGATCAGTCTCACCCCGAGTCAGAGAGGATATATGCCAAGTTGGAAGAAGTGATTGAAAAGATCTGGAAGGCTGGATTTGTGTCTCAAACTGAATTTATTCTACATGATGCTGAAGAGACAGTGAAAGAAGATATGATCAGTAAGCACAGTGAGAAATTAGCCATTGCATTTGGGCTTTTGGTGATTAATGCTGACATGCCAATAATTATTACCAAGAACCTTCGAATTTGTGGTGACTGTCACGGCGCTGCAAAGTTCATATCATTGATAGGGAAGCAAACTATCATAATTCGAGATTCTAAGCGGTTCCATCATTTTACTAATGGCATATGCACTTGTGGAGATTATTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

639

Amino Acids

71.33

Weight (kDa)

8.55

Isoelectric Point (pI)

35.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	129 - 177	5.1e-08	PPR repeat family
PPR_2	PF13041	231 - 277	1.3e-07	PPR repeat family
PPR_2	PF13041	331 - 379	5.2e-12	PPR repeat family
PPR	PF01535	334 - 364	4.8e-07	PPR repeat
E_motif	PF20431	449 - 511	1.5e-17	E motif
Eplus_motif	PF20430	516 - 543	8.4e-09	E+ motif
DYW_deaminase	PF14432	547 - 639	4.6e-36	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0008101)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40410
fragaria_vesca	FvH4_2g00730
malus_domestica	MD05G1003000.v1.1 MD10G1003900.v1.1
prunus_persica	Prupe.8G006400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0251111
rosa_laevigata	RLG00000015483
rosa_multiflora	Rmu_co8188818.1_g000001 Rmu_co8231405.1_g000001 Rmu_sc0002219.1_g000009 Rmu_sc0002219.1_g000010 Rmu_sc0002219.1_g000016 Rmu_sc0002219.1_g000017 Rmu_sc0002960.1_g000013 Rmu_sc0011355.1_g000002
rosa_roxburghii	Rroxscaffold_7G00217030
rosa_rugosa	Rorug05G0500400 Rorug05G0500500
rosa_samantha	Rh6AG008600 Rh6AG008700 Rh6AG009100 Rh6BG002600 Rh6DG006400
rosa_wichuraiana	Rw6G000930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1013
AccB7I	CCANNNNNTGG	1 cut(s)	1307
AccBSI	CCGCTC	1 cut(s)	206
AccI	GTMKAC	1 cut(s)	935
AccII	CGCG	2 cut(s)	424, 1505
AccIII	TCCGGA	1 cut(s)	991
AciI	CCGC	3 cut(s)	204, 746, 1870
AclWI	GGATC	3 cut(s)	745, 983, 1221
AcoI	YGGCCR	1 cut(s)	247
AcsI	RAATTY	9 cut(s)	52, 87, 400, 706, 835, 1414, 1545, 1658, 1791
AcuI	CTGAAG	2 cut(s)	1206, 1698
AcyI	GRCGYC	1 cut(s)	864
AfaI	GTAC	3 cut(s)	560, 805, 1439
AfiI	CCNNNNNNNGG	3 cut(s)	800, 1038, 1307
AflII	CTTAAG	1 cut(s)	965
AjiI	CACGTC	1 cut(s)	1105
AjnI	CCWGG	1 cut(s)	395
Alw21I	GWGCWC	1 cut(s)	233
Alw26I	GTCTC	8 cut(s)	36, 244, 397, 668, 1505, 1578, 1653, 1676
AlwI	GGATC	3 cut(s)	745, 983, 1221
Ama87I	CYCGRG	1 cut(s)	1580
Aor13HI	TCCGGA	1 cut(s)	991
AoxI	GGCC	1 cut(s)	247
ApeKI	GCWGC	3 cut(s)	743, 1445, 1814
ApoI	RAATTY	9 cut(s)	52, 87, 400, 706, 835, 1414, 1545, 1658, 1791
AseI	ATTAAT	2 cut(s)	624, 1752
Asp700I	GAANNNNTTC	2 cut(s)	1169, 1662
AspA2I	CCTAGG	1 cut(s)	1205
AspLEI	GCGC	2 cut(s)	457, 1814
AsuC2I	CCSGG	2 cut(s)	415, 1515
AsuHPI	GGTGA	7 cut(s)	112, 1099, 1486, 1568, 1577, 1759, 1811
AsuII	TTCGAA	1 cut(s)	1789
AsuNHI	GCTAGC	1 cut(s)	530
AvaI	CYCGRG	1 cut(s)	1580
AvrII	CCTAGG	1 cut(s)	1205
BaeI	ACNNNNGTAYC	2 cut(s)	795, 828
BanII	GRGCYC	1 cut(s)	1324
BauI	CACGAG	1 cut(s)	226
BbsI	GAAGAC	1 cut(s)	884
Bbv12I	GWGCWC	1 cut(s)	233
BbvI	GCAGC	3 cut(s)	755, 1457, 1801
BccI	CCATC	6 cut(s)	90, 287, 328, 794, 1408, 1884
BceAI	ACGGC	2 cut(s)	234, 1825
BciT130I	CCWGG	1 cut(s)	397
BclI	TGATCA	3 cut(s)	1099, 1567, 1701
BcnI	CCSGG	2 cut(s)	415, 1515
BcoDI	GTCTC	8 cut(s)	36, 244, 397, 668, 1505, 1578, 1653, 1676
BfaI	CTAG	4 cut(s)	531, 854, 926, 1206
BfmI	CTRYAG	4 cut(s)	345, 513, 741, 1443
BfoI	RGCGCY	1 cut(s)	1815
BfrI	CTTAAG	1 cut(s)	965
BfuAI	ACCTGC	1 cut(s)	1013
BglII	AGATCT	2 cut(s)	1062, 1626
BisI	GCNGC	3 cut(s)	744, 1446, 1815
BlnI	CCTAGG	1 cut(s)	1205
BlsI	GCNGC	3 cut(s)	745, 1447, 1816
Bme1390I	CCNGG	3 cut(s)	397, 415, 1515
BmeT110I	CYCGRG	1 cut(s)	1580
BmgBI	CACGTC	1 cut(s)	1105
BmiI	GGNNCC	3 cut(s)	600, 1299, 1874
BmrFI	CCNGG	3 cut(s)	397, 415, 1515
BmsI	GCATC	6 cut(s)	340, 643, 1255, 1453, 1508, 1663
BmtI	GCTAGC	1 cut(s)	534
BpiI	GAAGAC	1 cut(s)	884
BplI	GAGNNNNNCTC	2 cut(s)	1289, 1321
BpmI	CTGGAG	1 cut(s)	804
Bpu14I	TTCGAA	1 cut(s)	1789
BpuEI	CTTGAG	1 cut(s)	469
BpuMI	CCSGG	2 cut(s)	415, 1515
BsaHI	GRCGYC	1 cut(s)	864
BsaI	GGTCTC	2 cut(s)	397, 1505
BsaJI	CCNNGG	3 cut(s)	868, 1205, 1513
BsaWI	WCCGGW	1 cut(s)	991
BsaXI	ACNNNNNCTCC	2 cut(s)	377, 407
Bsc4I	CCNNNNNNNGG	3 cut(s)	800, 1038, 1307
Bse3DI	GCAATG	2 cut(s)	1020, 1728
BseAI	TCCGGA	1 cut(s)	991
BseBI	CCWGG	1 cut(s)	397
BseDI	CCNNGG	3 cut(s)	868, 1205, 1513
BseGI	GGATG	4 cut(s)	471, 658, 1468, 1523
BseLI	CCNNNNNNNGG	3 cut(s)	800, 1038, 1307
BseMI	GCAATG	2 cut(s)	1020, 1728
BseXI	GCAGC	3 cut(s)	755, 1457, 1801
BsgI	GTGCAG	1 cut(s)	1112
Bsh1236I	CGCG	2 cut(s)	424, 1505
BshFI	GGCC	1 cut(s)	249
BsiHKAI	GWGCWC	1 cut(s)	233
BsiHKCI	CYCGRG	1 cut(s)	1580
BsiSI	CCGG	3 cut(s)	414, 992, 1515
BslI	CCNNNNNNNGG	3 cut(s)	800, 1038, 1307
BsmAI	GTCTC	8 cut(s)	36, 244, 397, 668, 1505, 1578, 1653, 1676
BsmBI	CGTCTC	1 cut(s)	36
BsmI	GAATGC	1 cut(s)	1293
BsnI	GGCC	1 cut(s)	249
Bso31I	GGTCTC	2 cut(s)	397, 1505
BsoBI	CYCGRG	1 cut(s)	1580
Bsp119I	TTCGAA	1 cut(s)	1789
Bsp1286I	GDGCHC	2 cut(s)	233, 1324
Bsp13I	TCCGGA	1 cut(s)	991
Bsp1407I	TGTACA	1 cut(s)	558
Bsp19I	CCATGG	1 cut(s)	868
Bsp68I	TCGCGA	2 cut(s)	424, 1505
BspACI	CCGC	3 cut(s)	204, 746, 1870
BspANI	GGCC	1 cut(s)	249
BspEI	TCCGGA	1 cut(s)	991
BspFNI	CGCG	2 cut(s)	424, 1505
BspHI	TCATGA	1 cut(s)	771
BspLI	GGNNCC	3 cut(s)	600, 1299, 1874
BspMAI	CTGCAG	2 cut(s)	745, 1447
BspMI	ACCTGC	1 cut(s)	1013
BspOI	GCTAGC	1 cut(s)	534
BspPI	GGATC	3 cut(s)	745, 983, 1221
BspQI	GCTCTTC	2 cut(s)	122, 238
BspT104I	TTCGAA	1 cut(s)	1789
BspTI	CTTAAG	1 cut(s)	965
BspTNI	GGTCTC	2 cut(s)	397, 1505
BsrBI	CCGCTC	1 cut(s)	206
BsrDI	GCAATG	2 cut(s)	1020, 1728
BsrGI	TGTACA	1 cut(s)	558
BssECI	CCNNGG	3 cut(s)	868, 1205, 1513
BssNAI	GTATAC	1 cut(s)	936
BssNI	GRCGYC	1 cut(s)	864
BssSI	CACGAG	1 cut(s)	226
BssT1I	CCWWGG	2 cut(s)	868, 1205
Bst1107I	GTATAC	1 cut(s)	936
Bst2BI	CACGAG	1 cut(s)	226
Bst2UI	CCWGG	1 cut(s)	397
Bst4CI	ACNGT	3 cut(s)	1687, 1715, 1805
Bst6I	CTCTTC	4 cut(s)	122, 238, 421, 1674
BstACI	GRCGYC	1 cut(s)	864
BstAFI	CTTAAG	1 cut(s)	965
BstAPI	GCANNNNNTGC	2 cut(s)	1019, 1028
BstAUI	TGTACA	1 cut(s)	558
BstBI	TTCGAA	1 cut(s)	1789
BstC8I	GCNNGC	2 cut(s)	532, 1020
BstDEI	CTNAG	2 cut(s)	330, 1866
BstDSI	CCRYGG	1 cut(s)	868
BstF5I	GGATG	4 cut(s)	471, 658, 1468, 1523
BstFNI	CGCG	2 cut(s)	424, 1505
BstH2I	RGCGCY	1 cut(s)	1815
BstHHI	GCGC	2 cut(s)	457, 1814
BstMAI	GTCTC	8 cut(s)	36, 244, 397, 668, 1505, 1578, 1653, 1676
BstMWI	GCNNNNNNNGC	7 cut(s)	260, 350, 725, 1010, 1019, 1028, 1297
BstNI	CCWGG	1 cut(s)	397
BstNSI	RCATGY	2 cut(s)	559, 1765
BstSCI	CCNGG	3 cut(s)	395, 413, 1513
BstSFI	CTRYAG	4 cut(s)	345, 513, 741, 1443
BstUI	CGCG	2 cut(s)	424, 1505
BstV1I	GCAGC	3 cut(s)	755, 1457, 1801
BstV2I	GAAGAC	1 cut(s)	884
BstX2I	RGATCY	3 cut(s)	737, 1062, 1626
BstYI	RGATCY	3 cut(s)	737, 1062, 1626
BstZ17I	GTATAC	1 cut(s)	936
BsuRI	GGCC	1 cut(s)	249
BtgI	CCRYGG	1 cut(s)	868
BtgZI	GCGATG	1 cut(s)	1535
BtrI	CACGTC	1 cut(s)	1105
BtsCI	GGATG	4 cut(s)	471, 658, 1468, 1523
BtsI	GCAGTG	1 cut(s)	541
BtsIMutI	CAGTG	4 cut(s)	541, 575, 1692, 1720
BtuMI	TCGCGA	2 cut(s)	424, 1505
BveI	ACCTGC	1 cut(s)	1013
Cac8I	GCNNGC	2 cut(s)	532, 1020
CciI	TCATGA	1 cut(s)	771
CfoI	GCGC	2 cut(s)	457, 1814
CseI	GACGC	1 cut(s)	853
Csp6I	GTAC	3 cut(s)	559, 804, 1438
CviQI	GTAC	3 cut(s)	559, 804, 1438
DdeI	CTNAG	2 cut(s)	330, 1866
EaeI	YGGCCR	1 cut(s)	247
Eam1104I	CTCTTC	4 cut(s)	122, 238, 421, 1674
EarI	CTCTTC	4 cut(s)	122, 238, 421, 1674
Eco130I	CCWWGG	2 cut(s)	868, 1205
Eco24I	GRGCYC	1 cut(s)	1324
Eco31I	GGTCTC	2 cut(s)	397, 1505
Eco57I	CTGAAG	2 cut(s)	1206, 1698
Eco88I	CYCGRG	1 cut(s)	1580
EcoRI	GAATTC	1 cut(s)	400
EcoRII	CCWGG	1 cut(s)	395
EcoT14I	CCWWGG	2 cut(s)	868, 1205
EcoT38I	GRGCYC	1 cut(s)	1324
ErhI	CCWWGG	2 cut(s)	868, 1205
Esp3I	CGTCTC	1 cut(s)	36
FalI	AAGNNNNNCTT	2 cut(s)	371, 403
FauNDI	CATATG	1 cut(s)	1895
FbaI	TGATCA	3 cut(s)	1099, 1567, 1701
FblI	GTMKAC	1 cut(s)	935
Fnu4HI	GCNGC	3 cut(s)	744, 1446, 1815
FokI	GGATG	4 cut(s)	478, 665, 1475, 1530
FriOI	GRGCYC	1 cut(s)	1324
Fsp4HI	GCNGC	3 cut(s)	744, 1446, 1815
FspBI	CTAG	4 cut(s)	531, 854, 926, 1206
GlaI	GCGC	2 cut(s)	456, 1813
GluI	GCNGC	3 cut(s)	744, 1446, 1815
GsuI	CTGGAG	1 cut(s)	804
HaeII	RGCGCY	1 cut(s)	1815
HaeIII	GGCC	1 cut(s)	249
HapII	CCGG	3 cut(s)	414, 992, 1515
HgaI	GACGC	1 cut(s)	853
HhaI	GCGC	2 cut(s)	457, 1814
Hin1I	GRCGYC	1 cut(s)	864
Hin6I	GCGC	2 cut(s)	455, 1812
HinP1I	GCGC	2 cut(s)	455, 1812
HindIII	AAGCTT	1 cut(s)	605
HinfI	GANTC	4 cut(s)	850, 1406, 1583, 1862
HpaII	CCGG	3 cut(s)	414, 992, 1515
HphI	GGTGA	7 cut(s)	112, 1099, 1486, 1568, 1577, 1759, 1811
Hpy166II	GTNNAC	1 cut(s)	936
Hpy8I	GTNNAC	1 cut(s)	936
Hpy99I	CGWCG	1 cut(s)	31
HpyAV	CCTTC	9 cut(s)	376, 545, 771, 1120, 1151, 1360, 1483, 1627, 1796
HpyCH4III	ACNGT	3 cut(s)	1687, 1715, 1805
HpyCH4IV	ACGT	2 cut(s)	13, 1104
HpyF10VI	GCNNNNNNNGC	7 cut(s)	260, 350, 725, 1010, 1019, 1028, 1297
HpyF3I	CTNAG	2 cut(s)	330, 1866
HpySE526I	ACGT	2 cut(s)	13, 1104
Hsp92I	GRCGYC	1 cut(s)	864
HspAI	GCGC	2 cut(s)	455, 1812
Kpn2I	TCCGGA	1 cut(s)	991
Ksp22I	TGATCA	3 cut(s)	1099, 1567, 1701
LguI	GCTCTTC	2 cut(s)	122, 238
LmnI	GCTCC	2 cut(s)	539, 1297
Lsp1109I	GCAGC	3 cut(s)	755, 1457, 1801
LweI	GCATC	6 cut(s)	340, 643, 1255, 1453, 1508, 1663
MaeI	CTAG	4 cut(s)	531, 854, 926, 1206
MaeII	ACGT	2 cut(s)	13, 1104
MaeIII	GTNAC	4 cut(s)	499, 1105, 1799, 1805
MbiI	CCGCTC	1 cut(s)	206
MflI	RGATCY	3 cut(s)	737, 1062, 1626
MhlI	GDGCHC	2 cut(s)	233, 1324
MlyI	GAGTC	1 cut(s)	1592
MmeI	TCCRAC	2 cut(s)	1191, 1587
MnlI	CCTC	9 cut(s)	162, 422, 490, 742, 973, 1155, 1452, 1470, 1584
MroI	TCCGGA	1 cut(s)	991
MroXI	GAANNNNTTC	2 cut(s)	1169, 1662
MslI	CAYNNNNRTG	1 cut(s)	1041
MspA1I	CMGCKG	3 cut(s)	313, 746, 1448
MspCI	CTTAAG	1 cut(s)	965
MspI	CCGG	3 cut(s)	414, 992, 1515
MspR9I	CCNGG	3 cut(s)	397, 415, 1515
Mva1269I	GAATGC	1 cut(s)	1293
MvaI	CCWGG	1 cut(s)	397
MvnI	CGCG	2 cut(s)	424, 1505
MwoI	GCNNNNNNNGC	7 cut(s)	260, 350, 725, 1010, 1019, 1028, 1297
NciI	CCSGG	2 cut(s)	415, 1515
NcoI	CCATGG	1 cut(s)	868
NdeI	CATATG	1 cut(s)	1895
NheI	GCTAGC	1 cut(s)	530
NlaIV	GGNNCC	3 cut(s)	600, 1299, 1874
NmuCI	GTSAC	3 cut(s)	1105, 1799, 1805
NruI	TCGCGA	2 cut(s)	424, 1505
NspI	RCATGY	2 cut(s)	559, 1765
NspV	TTCGAA	1 cut(s)	1789
PagI	TCATGA	1 cut(s)	771
PciSI	GCTCTTC	2 cut(s)	122, 238
PctI	GAATGC	1 cut(s)	1293
PdmI	GAANNNNTTC	2 cut(s)	1169, 1662
PfeI	GAWTC	3 cut(s)	850, 1406, 1862
PflFI	GACNNNGTC	1 cut(s)	389
PflMI	CCANNNNNTGG	1 cut(s)	1307
PfoI	TCCNGGA	1 cut(s)	395
PkrI	GCNGC	3 cut(s)	745, 1447, 1816
PleI	GAGTC	1 cut(s)	1591
PpsI	GAGTC	1 cut(s)	1591
PshBI	ATTAAT	2 cut(s)	624, 1752
Psp6I	CCWGG	1 cut(s)	395
PspGI	CCWGG	1 cut(s)	395
PspN4I	GGNNCC	3 cut(s)	600, 1299, 1874
PstI	CTGCAG	2 cut(s)	745, 1447
PsuI	RGATCY	3 cut(s)	737, 1062, 1626
PsyI	GACNNNGTC	1 cut(s)	389
PvuII	CAGCTG	2 cut(s)	313, 1448
RruI	TCGCGA	2 cut(s)	424, 1505
RsaI	GTAC	3 cut(s)	560, 805, 1439
RsaNI	GTAC	3 cut(s)	559, 804, 1438
RseI	CAYNNNNRTG	1 cut(s)	1041
SapI	GCTCTTC	2 cut(s)	122, 238
SatI	GCNGC	3 cut(s)	744, 1446, 1815
SchI	GAGTC	1 cut(s)	1592
ScrFI	CCNGG	3 cut(s)	397, 415, 1515
SduI	GDGCHC	2 cut(s)	233, 1324
SfaNI	GCATC	6 cut(s)	340, 643, 1255, 1453, 1508, 1663
SfcI	CTRYAG	4 cut(s)	345, 513, 741, 1443
SfuI	TTCGAA	1 cut(s)	1789
SmiMI	CAYNNNNRTG	1 cut(s)	1041
SmlI	CTYRAG	2 cut(s)	448, 965
SmoI	CTYRAG	2 cut(s)	448, 965
SsiI	CCGC	3 cut(s)	204, 746, 1870
SspI	AATATT	1 cut(s)	1354
SspMI	CTAG	4 cut(s)	531, 854, 926, 1206
StyD4I	CCNGG	3 cut(s)	395, 413, 1513
StyI	CCWWGG	2 cut(s)	868, 1205
TaaI	ACNGT	3 cut(s)	1687, 1715, 1805
TaiI	ACGT	2 cut(s)	16, 1107
TaqI	TCGA	4 cut(s)	366, 664, 1789, 1858
TatI	WGTACW	2 cut(s)	558, 1437
TfiI	GAWTC	3 cut(s)	850, 1406, 1862
TscAI	CASTG	4 cut(s)	541, 582, 1692, 1720
TseFI	GTSAC	3 cut(s)	1105, 1799, 1805
TseI	GCWGC	3 cut(s)	743, 1445, 1814
Tsp45I	GTSAC	3 cut(s)	1105, 1799, 1805
TspRI	CASTG	4 cut(s)	541, 582, 1692, 1720
Tth111I	GACNNNGTC	1 cut(s)	389
Van91I	CCANNNNNTGG	1 cut(s)	1307
Vha464I	CTTAAG	1 cut(s)	965
VspI	ATTAAT	2 cut(s)	624, 1752
XapI	RAATTY	9 cut(s)	52, 87, 400, 706, 835, 1414, 1545, 1658, 1791
XbaI	TCTAGA	1 cut(s)	925
XceI	RCATGY	2 cut(s)	559, 1765
XcmI	CCANNNNNNNNNTGG	1 cut(s)	385
XmaJI	CCTAGG	1 cut(s)	1205
XmiI	GTMKAC	1 cut(s)	935
XmnI	GAANNNNTTC	2 cut(s)	1169, 1662
XspI	CTAG	4 cut(s)	531, 854, 926, 1206

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.