Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0008101

Physical Location & Seq

Genomic Coordinates Reverse (-)

1372664 .. 1374591

Gene Structure 1928 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G000930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1647 bp

ATGATAAGACTACGTTCTTGTTCATCGTCGTCTCTGCTCTACTTTCACTTAAAATTCAGAACAGATGTTTATTCTTCTCCCATCACATTCAAAACCCACAATGTATCTACAAGCTCTTCACCCAGAAAACATTTCACAATGCAACTTCTTCCTCACTCATCTTTCCAATTTCGCACACATTCAAACTCGGACATTCTTCTTTCCGCTCTAATTTCTGCTATAAGCTCCTGCCCTTCTGTCTCCTATGGCCGTGCCATTCACGCATGTGTAATCAAGTCTTACAATTACAGTGATGGGTTCATTGGCGATCAGCTGCTGTTTGATGAAATGCCCAACAAGGACTTGGTCTCCTGGAATTCTTTGATTTCCGGGTTTTCGCGAAGAGGGTATGTGGATAAATGCTTGAGTGCGTTTCTTAGGATGAAGTTTGAAATGGGAAAAGAACCCAATGAGGTTACGCTTATATCTGTAGTTTCAGCTTGTGCTAGCAGTGGAGCTTTGAGACTGCCGATACAGAGTGTAGTGTCATGGAATTTATTAATGATAGCAACTTACGCTCAAAATGGATCTGCAGCGGAGGGGTTGAATTGTTTTAATCTCATGAGAAGGGCTGGAGTTTATCCTGATGATGGTACTCTTGTGTCTTTGCTTCAAGTTTGCGAGAATTTAGGTTTAGGGAATCTAGCACAGGGCGTCCATGGTTTAATTATCAAGTGTGGTCTTAGTGCAAATGTCAGAGTTGCAACGGGAGTTCTAGATTTGTATACGAAGTTGGGGCGATTAGATTATTCACTAAAGGTTTTCAAGGAGGTAATTGATCCGGATAAAGCAGCTTGGACTGCAATGCTTGCATGTTATGCTACGCATGGGTATGGACGAGAAGCTATGGAGATCTTTGAAAGCATGGTTAGGAAAGGTGTGCAGCCTGATCACGTCACCTTCACTCACTTGTTAAGTGCTTGTAGCCATTCAGGACTAATTAAGGAAGGGAGGAATTACTTCAACATTATGTCTGAAGTTTATGGAGTAGAGCCTAGGTTGGATCACTATTCATGCATGCCAAACTCTGGTGTATGGGGGGCTCTTTTCAGTTCTTGTAGGGTTTATGGTAATATTGAACTTGGGAAGGCAGTTGCAGAGAGATTATTTGCTTTAGAGCCATCTGATTCCAGAAATTTTATCATGCTATCAAATATGTACTCTGCAGCTGGTTTATGGAGGGATGCTTCAAAGGTGAGGGCTTTGATGAAGGAGAAAGGTCTCGTGAGAACCCCCGGATGCAGTTTTATTGAATATGGAAATAAAATTCATCGCTTTGTTGTGGGTGATCAGTCTCACCCCGAGTCAGATAGGATATATGCCAAGTTGGAAGAAGTGATTGAAAAGATCCGGAAGGCTGGATTTGTGTCTCAAACTGAATTATTCTACATGATTAAGCACAGTGAGAAATTAGCCATTGCATTTGGGCTTTTGGTGATTAATGCTGGCATGCCAATAATTATTACCAAGAACCTTCGAATTTGTGGTGACTGTCAAGGCGCTGCAAAGTTCATATCATTGATTGAGAAGCGAACTATCATAATTCGAGATTCTAAGCGGTTCCATCATTTTACTAATGGTATATGCACTTGTGGAGATTATTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

548

Amino Acids

60.99

Weight (kDa)

8.94

Isoelectric Point (pI)

42.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	114 - 162	5.1e-07	PPR repeat family
PPR	PF01535	116 - 142	2.3e-06	PPR repeat
PPR_3	PF13812	272 - 321	7.3e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	274 - 322	3.1e-12	PPR repeat family
PPR	PF01535	278 - 307	1.8e-06	PPR repeat
PPR_3	PF13812	298 - 351	5.5e-06	Pentatricopeptide repeat domain
E_motif	PF20431	369 - 431	2.4e-17	E motif
Eplus_motif	PF20430	436 - 463	1.9e-09	E+ motif
DYW_deaminase	PF14432	477 - 548	3.7e-30	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008101)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40410
fragaria_vesca	FvH4_2g00730
malus_domestica	MD05G1003000.v1.1 MD10G1003900.v1.1
prunus_persica	Prupe.8G006400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0251111
rosa_laevigata	RLG00000015483
rosa_multiflora	Rmu_co8188818.1_g000001 Rmu_co8231405.1_g000001 Rmu_sc0002219.1_g000009 Rmu_sc0002219.1_g000010 Rmu_sc0002219.1_g000016 Rmu_sc0002219.1_g000017 Rmu_sc0002960.1_g000013 Rmu_sc0011355.1_g000002
rosa_roxburghii	Rroxscaffold_7G00217030
rosa_rugosa	Rorug05G0500400 Rorug05G0500500
rosa_samantha	Rh6AG008600 Rh6AG008700 Rh6AG009100 Rh6BG002600 Rh6DG006400
rosa_wichuraiana	Rw6G000930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1067
AccBSI	CCGCTC	1 cut(s)	206
AccI	GTMKAC	1 cut(s)	764
AccII	CGCG	1 cut(s)	379
AccIII	TCCGGA	2 cut(s)	820, 1389
AciI	CCGC	3 cut(s)	204, 575, 1597
AclWI	GGATC	4 cut(s)	574, 812, 1050, 1381
AcoI	YGGCCR	1 cut(s)	247
AcsI	RAATTY	7 cut(s)	53, 355, 532, 664, 1174, 1305, 1518
AcuI	CTGAAG	1 cut(s)	1035
AcyI	GRCGYC	1 cut(s)	693
AfaI	GTAC	2 cut(s)	634, 1199
AfiI	CCNNNNNNNGG	2 cut(s)	629, 1067
AjiI	CACGTC	1 cut(s)	934
AjnI	CCWGG	1 cut(s)	350
AleI	CACNNNNGTG	1 cut(s)	264
AluBI	AGCT	8 cut(s)	114, 225, 313, 479, 497, 833, 884, 1208
AluI	AGCT	8 cut(s)	114, 225, 313, 479, 497, 833, 884, 1208
Alw26I	GTCTC	7 cut(s)	36, 244, 352, 496, 1265, 1338, 1413
AlwI	GGATC	4 cut(s)	574, 812, 1050, 1381
AlwNI	CAGNNNCTG	1 cut(s)	316
Ama87I	CYCGRG	1 cut(s)	1340
Aor13HI	TCCGGA	2 cut(s)	820, 1389
AoxI	GGCC	1 cut(s)	247
ApeKI	GCWGC	6 cut(s)	313, 572, 830, 922, 1205, 1541
ApoI	RAATTY	7 cut(s)	53, 355, 532, 664, 1174, 1305, 1518
AseI	ATTAAT	2 cut(s)	539, 1479
Asp700I	GAANNNNTTC	1 cut(s)	998
AspA2I	CCTAGG	1 cut(s)	1034
AspLEI	GCGC	1 cut(s)	1541
AsuC2I	CCSGG	2 cut(s)	370, 1275
AsuHPI	GGTGA	7 cut(s)	111, 928, 1246, 1328, 1337, 1486, 1538
AsuII	TTCGAA	1 cut(s)	1516
AsuNHI	GCTAGC	1 cut(s)	485
AvaI	CYCGRG	1 cut(s)	1340
AvrII	CCTAGG	1 cut(s)	1034
BaeI	ACNNNNGTAYC	2 cut(s)	624, 657
BanII	GRGCYC	1 cut(s)	1084
BauI	CACGAG	1 cut(s)	1262
BbvI	GCAGC	6 cut(s)	300, 584, 842, 934, 1217, 1528
BccI	CCATC	5 cut(s)	89, 287, 623, 1168, 1611
BceAI	ACGGC	1 cut(s)	234
BciT130I	CCWGG	1 cut(s)	352
BclI	TGATCA	2 cut(s)	928, 1327
BcnI	CCSGG	2 cut(s)	370, 1275
BcoDI	GTCTC	7 cut(s)	36, 244, 352, 496, 1265, 1338, 1413
BfaI	CTAG	4 cut(s)	486, 683, 755, 1035
BfmI	CTRYAG	3 cut(s)	468, 570, 1203
BfoI	RGCGCY	1 cut(s)	1542
BglII	AGATCT	1 cut(s)	891
BisI	GCNGC	6 cut(s)	314, 573, 831, 923, 1206, 1542
BlnI	CCTAGG	1 cut(s)	1034
BlsI	GCNGC	6 cut(s)	315, 574, 832, 924, 1207, 1543
Bme1390I	CCNGG	3 cut(s)	352, 370, 1275
BmeT110I	CYCGRG	1 cut(s)	1340
BmgBI	CACGTC	1 cut(s)	934
BmiI	GGNNCC	1 cut(s)	1601
BmrFI	CCNGG	3 cut(s)	352, 370, 1275
BmsI	GCATC	2 cut(s)	1213, 1268
BmtI	GCTAGC	1 cut(s)	489
BpmI	CTGGAG	1 cut(s)	633
Bpu14I	TTCGAA	1 cut(s)	1516
BpuEI	CTTGAG	1 cut(s)	424
BpuMI	CCSGG	2 cut(s)	370, 1275
BsaHI	GRCGYC	1 cut(s)	693
BsaI	GGTCTC	2 cut(s)	352, 1265
BsaJI	CCNNGG	3 cut(s)	697, 1034, 1273
BsaWI	WCCGGW	2 cut(s)	820, 1389
BsaXI	ACNNNNNCTCC	2 cut(s)	332, 362
Bsc4I	CCNNNNNNNGG	2 cut(s)	629, 1067
Bse3DI	GCAATG	2 cut(s)	849, 1455
BseAI	TCCGGA	2 cut(s)	820, 1389
BseBI	CCWGG	1 cut(s)	352
BseDI	CCNNGG	3 cut(s)	697, 1034, 1273
BseGI	GGATG	3 cut(s)	426, 1228, 1283
BseLI	CCNNNNNNNGG	2 cut(s)	629, 1067
BseMI	GCAATG	2 cut(s)	849, 1455
BseXI	GCAGC	6 cut(s)	300, 584, 842, 934, 1217, 1528
BsgI	GTGCAG	1 cut(s)	941
Bsh1236I	CGCG	1 cut(s)	379
BshFI	GGCC	1 cut(s)	249
BsiHKCI	CYCGRG	1 cut(s)	1340
BsiSI	CCGG	4 cut(s)	369, 821, 1275, 1390
BslI	CCNNNNNNNGG	2 cut(s)	629, 1067
BsmAI	GTCTC	7 cut(s)	36, 244, 352, 496, 1265, 1338, 1413
BsmBI	CGTCTC	1 cut(s)	36
BsnI	GGCC	1 cut(s)	249
Bso31I	GGTCTC	2 cut(s)	352, 1265
BsoBI	CYCGRG	1 cut(s)	1340
Bsp119I	TTCGAA	1 cut(s)	1516
Bsp1286I	GDGCHC	1 cut(s)	1084
Bsp13I	TCCGGA	2 cut(s)	820, 1389
Bsp143I	GATC	8 cut(s)	307, 566, 817, 891, 928, 1042, 1327, 1386
Bsp19I	CCATGG	1 cut(s)	697
Bsp68I	TCGCGA	1 cut(s)	379
BspACI	CCGC	3 cut(s)	204, 575, 1597
BspANI	GGCC	1 cut(s)	249
BspEI	TCCGGA	2 cut(s)	820, 1389
BspFNI	CGCG	1 cut(s)	379
BspHI	TCATGA	1 cut(s)	600
BspLI	GGNNCC	1 cut(s)	1601
BspMAI	CTGCAG	2 cut(s)	574, 1207
BspOI	GCTAGC	1 cut(s)	489
BspPI	GGATC	4 cut(s)	574, 812, 1050, 1381
BspQI	GCTCTTC	1 cut(s)	121
BspT104I	TTCGAA	1 cut(s)	1516
BspTNI	GGTCTC	2 cut(s)	352, 1265
BsrBI	CCGCTC	1 cut(s)	206
BsrDI	GCAATG	2 cut(s)	849, 1455
BssECI	CCNNGG	3 cut(s)	697, 1034, 1273
BssMI	GATC	8 cut(s)	307, 566, 817, 891, 928, 1042, 1327, 1386
BssNAI	GTATAC	1 cut(s)	765
BssNI	GRCGYC	1 cut(s)	693
BssSI	CACGAG	1 cut(s)	1262
BssT1I	CCWWGG	2 cut(s)	697, 1034
Bst1107I	GTATAC	1 cut(s)	765
Bst2BI	CACGAG	1 cut(s)	1262
Bst2UI	CCWGG	1 cut(s)	352
Bst4CI	ACNGT	3 cut(s)	290, 1442, 1532
Bst6I	CTCTTC	2 cut(s)	121, 376
BstACI	GRCGYC	1 cut(s)	693
BstAPI	GCANNNNNTGC	2 cut(s)	848, 857
BstBI	TTCGAA	1 cut(s)	1516
BstC8I	GCNNGC	5 cut(s)	487, 849, 1058, 1486, 1490
BstDEI	CTNAG	3 cut(s)	416, 722, 1593
BstDSI	CCRYGG	1 cut(s)	697
BstF5I	GGATG	3 cut(s)	426, 1228, 1283
BstFNI	CGCG	1 cut(s)	379
BstH2I	RGCGCY	1 cut(s)	1542
BstHHI	GCGC	1 cut(s)	1541
BstKTI	GATC	8 cut(s)	310, 569, 820, 894, 931, 1045, 1330, 1389
BstMAI	GTCTC	7 cut(s)	36, 244, 352, 496, 1265, 1338, 1413
BstMBI	GATC	8 cut(s)	307, 566, 817, 891, 928, 1042, 1327, 1386
BstMWI	GCNNNNNNNGC	5 cut(s)	260, 554, 839, 848, 857
BstNI	CCWGG	1 cut(s)	352
BstNSI	RCATGY	4 cut(s)	267, 855, 1060, 1492
BstSCI	CCNGG	3 cut(s)	350, 368, 1273
BstSFI	CTRYAG	3 cut(s)	468, 570, 1203
BstUI	CGCG	1 cut(s)	379
BstV1I	GCAGC	6 cut(s)	300, 584, 842, 934, 1217, 1528
BstX2I	RGATCY	3 cut(s)	566, 891, 1386
BstYI	RGATCY	3 cut(s)	566, 891, 1386
BstZ17I	GTATAC	1 cut(s)	765
BsuRI	GGCC	1 cut(s)	249
BtgI	CCRYGG	1 cut(s)	697
BtgZI	GCGATG	1 cut(s)	1295
BtrI	CACGTC	1 cut(s)	934
BtsCI	GGATG	3 cut(s)	426, 1228, 1283
BtsI	GCAGTG	1 cut(s)	496
BtsIMutI	CAGTG	3 cut(s)	295, 496, 1447
BtuMI	TCGCGA	1 cut(s)	379
Cac8I	GCNNGC	5 cut(s)	487, 849, 1058, 1486, 1490
CaiI	CAGNNNCTG	1 cut(s)	316
CciI	TCATGA	1 cut(s)	600
CfoI	GCGC	1 cut(s)	1541
CseI	GACGC	1 cut(s)	682
Csp6I	GTAC	2 cut(s)	633, 1198
CviQI	GTAC	2 cut(s)	633, 1198
DdeI	CTNAG	3 cut(s)	416, 722, 1593
DpnI	GATC	8 cut(s)	309, 568, 819, 893, 930, 1044, 1329, 1388
DpnII	GATC	8 cut(s)	307, 566, 817, 891, 928, 1042, 1327, 1386
EaeI	YGGCCR	1 cut(s)	247
Eam1104I	CTCTTC	2 cut(s)	121, 376
EarI	CTCTTC	2 cut(s)	121, 376
Eco130I	CCWWGG	2 cut(s)	697, 1034
Eco24I	GRGCYC	1 cut(s)	1084
Eco31I	GGTCTC	2 cut(s)	352, 1265
Eco57I	CTGAAG	1 cut(s)	1035
Eco88I	CYCGRG	1 cut(s)	1340
EcoRI	GAATTC	1 cut(s)	355
EcoRII	CCWGG	1 cut(s)	350
EcoT14I	CCWWGG	2 cut(s)	697, 1034
EcoT22I	ATGCAT	1 cut(s)	1058
EcoT38I	GRGCYC	1 cut(s)	1084
ErhI	CCWWGG	2 cut(s)	697, 1034
Esp3I	CGTCTC	1 cut(s)	36
FbaI	TGATCA	2 cut(s)	928, 1327
FblI	GTMKAC	1 cut(s)	764
Fnu4HI	GCNGC	6 cut(s)	314, 573, 831, 923, 1206, 1542
FokI	GGATG	3 cut(s)	433, 1235, 1290
FriOI	GRGCYC	1 cut(s)	1084
Fsp4HI	GCNGC	6 cut(s)	314, 573, 831, 923, 1206, 1542
FspBI	CTAG	4 cut(s)	486, 683, 755, 1035
GlaI	GCGC	1 cut(s)	1540
GluI	GCNGC	6 cut(s)	314, 573, 831, 923, 1206, 1542
GsuI	CTGGAG	1 cut(s)	633
HaeII	RGCGCY	1 cut(s)	1542
HaeIII	GGCC	1 cut(s)	249
HapII	CCGG	4 cut(s)	369, 821, 1275, 1390
HgaI	GACGC	1 cut(s)	682
HhaI	GCGC	1 cut(s)	1541
Hin1I	GRCGYC	1 cut(s)	693
Hin6I	GCGC	1 cut(s)	1539
HinP1I	GCGC	1 cut(s)	1539
HinfI	GANTC	4 cut(s)	679, 1166, 1343, 1589
HpaII	CCGG	4 cut(s)	369, 821, 1275, 1390
HphI	GGTGA	7 cut(s)	111, 928, 1246, 1328, 1337, 1486, 1538
Hpy166II	GTNNAC	1 cut(s)	765
Hpy188I	TCNGA	6 cut(s)	59, 190, 737, 1015, 1165, 1348
Hpy8I	GTNNAC	1 cut(s)	765
Hpy99I	CGWCG	1 cut(s)	31
HpyAV	CCTTC	8 cut(s)	243, 600, 949, 980, 1120, 1243, 1387, 1523
HpyCH4III	ACNGT	3 cut(s)	290, 1442, 1532
HpyCH4IV	ACGT	2 cut(s)	13, 933
HpyF10VI	GCNNNNNNNGC	5 cut(s)	260, 554, 839, 848, 857
HpyF3I	CTNAG	3 cut(s)	416, 722, 1593
HpySE526I	ACGT	2 cut(s)	13, 933
Hsp92I	GRCGYC	1 cut(s)	693
HspAI	GCGC	1 cut(s)	1539
Kpn2I	TCCGGA	2 cut(s)	820, 1389
Ksp22I	TGATCA	2 cut(s)	928, 1327
Kzo9I	GATC	8 cut(s)	307, 566, 817, 891, 928, 1042, 1327, 1386
LguI	GCTCTTC	1 cut(s)	121
LmnI	GCTCC	2 cut(s)	230, 494
Lsp1109I	GCAGC	6 cut(s)	300, 584, 842, 934, 1217, 1528
LweI	GCATC	2 cut(s)	1213, 1268
MaeI	CTAG	4 cut(s)	486, 683, 755, 1035
MaeII	ACGT	2 cut(s)	13, 933
MaeIII	GTNAC	3 cut(s)	454, 934, 1526
MalI	GATC	8 cut(s)	309, 568, 819, 893, 930, 1044, 1329, 1388
MbiI	CCGCTC	1 cut(s)	206
MboI	GATC	8 cut(s)	307, 566, 817, 891, 928, 1042, 1327, 1386
MboII	GAAGA	6 cut(s)	66, 108, 140, 188, 393, 1382
MflI	RGATCY	3 cut(s)	566, 891, 1386
MhlI	GDGCHC	1 cut(s)	1084
MlyI	GAGTC	1 cut(s)	1352
MmeI	TCCRAC	2 cut(s)	1020, 1347
MnlI	CCTC	8 cut(s)	162, 377, 445, 571, 802, 984, 1212, 1230
Mph1103I	ATGCAT	1 cut(s)	1058
MroI	TCCGGA	2 cut(s)	820, 1389
MroXI	GAANNNNTTC	1 cut(s)	998
MseI	TTAA	8 cut(s)	50, 539, 594, 704, 953, 981, 1434, 1479
MslI	CAYNNNNRTG	2 cut(s)	264, 870
MspA1I	CMGCKG	3 cut(s)	313, 575, 1208
MspI	CCGG	4 cut(s)	369, 821, 1275, 1390
MspR9I	CCNGG	3 cut(s)	352, 370, 1275
MvaI	CCWGG	1 cut(s)	352
MvnI	CGCG	1 cut(s)	379
MwoI	GCNNNNNNNGC	5 cut(s)	260, 554, 839, 848, 857
NciI	CCSGG	2 cut(s)	370, 1275
NcoI	CCATGG	1 cut(s)	697
NdeII	GATC	8 cut(s)	307, 566, 817, 891, 928, 1042, 1327, 1386
NheI	GCTAGC	1 cut(s)	485
NlaIV	GGNNCC	1 cut(s)	1601
NmuCI	GTSAC	2 cut(s)	934, 1526
NruI	TCGCGA	1 cut(s)	379
NsiI	ATGCAT	1 cut(s)	1058
NspI	RCATGY	4 cut(s)	267, 855, 1060, 1492
NspV	TTCGAA	1 cut(s)	1516
OliI	CACNNNNGTG	1 cut(s)	264
PaeI	GCATGC	2 cut(s)	1060, 1492
PagI	TCATGA	1 cut(s)	600
PciSI	GCTCTTC	1 cut(s)	121
PdmI	GAANNNNTTC	1 cut(s)	998
PfeI	GAWTC	3 cut(s)	679, 1166, 1589
PflFI	GACNNNGTC	1 cut(s)	344
PflMI	CCANNNNNTGG	1 cut(s)	1067
PfoI	TCCNGGA	1 cut(s)	350
PkrI	GCNGC	6 cut(s)	315, 574, 832, 924, 1207, 1543
PleI	GAGTC	1 cut(s)	1351
PpsI	GAGTC	1 cut(s)	1351
PshBI	ATTAAT	2 cut(s)	539, 1479
Psp6I	CCWGG	1 cut(s)	350
PspGI	CCWGG	1 cut(s)	350
PspN4I	GGNNCC	1 cut(s)	1601
PstI	CTGCAG	2 cut(s)	574, 1207
PstNI	CAGNNNCTG	1 cut(s)	316
PsuI	RGATCY	3 cut(s)	566, 891, 1386
PsyI	GACNNNGTC	1 cut(s)	344
PvuII	CAGCTG	2 cut(s)	313, 1208
RruI	TCGCGA	1 cut(s)	379
RsaI	GTAC	2 cut(s)	634, 1199
RsaNI	GTAC	2 cut(s)	633, 1198
RseI	CAYNNNNRTG	2 cut(s)	264, 870
SapI	GCTCTTC	1 cut(s)	121
SaqAI	TTAA	8 cut(s)	50, 539, 594, 704, 953, 981, 1434, 1479
SatI	GCNGC	6 cut(s)	314, 573, 831, 923, 1206, 1542
Sau3AI	GATC	8 cut(s)	307, 566, 817, 891, 928, 1042, 1327, 1386
SchI	GAGTC	1 cut(s)	1352
ScrFI	CCNGG	3 cut(s)	352, 370, 1275
SduI	GDGCHC	1 cut(s)	1084
SfaNI	GCATC	2 cut(s)	1213, 1268
SfcI	CTRYAG	3 cut(s)	468, 570, 1203
SfuI	TTCGAA	1 cut(s)	1516
SmiMI	CAYNNNNRTG	2 cut(s)	264, 870
SmlI	CTYRAG	1 cut(s)	403
SmoI	CTYRAG	1 cut(s)	403
SphI	GCATGC	2 cut(s)	1060, 1492
SsiI	CCGC	3 cut(s)	204, 575, 1597
SspI	AATATT	1 cut(s)	1114
SspMI	CTAG	4 cut(s)	486, 683, 755, 1035
StyD4I	CCNGG	3 cut(s)	350, 368, 1273
StyI	CCWWGG	2 cut(s)	697, 1034
TaaI	ACNGT	3 cut(s)	290, 1442, 1532
TaiI	ACGT	2 cut(s)	16, 936
TaqI	TCGA	2 cut(s)	1516, 1585
TatI	WGTACW	1 cut(s)	1197
TfiI	GAWTC	3 cut(s)	679, 1166, 1589
Tru1I	TTAA	8 cut(s)	50, 539, 594, 704, 953, 981, 1434, 1479
Tru9I	TTAA	8 cut(s)	50, 539, 594, 704, 953, 981, 1434, 1479
TscAI	CASTG	3 cut(s)	295, 496, 1447
TseFI	GTSAC	2 cut(s)	934, 1526
TseI	GCWGC	6 cut(s)	313, 572, 830, 922, 1205, 1541
Tsp45I	GTSAC	2 cut(s)	934, 1526
TspDTI	ATGAA	8 cut(s)	12, 289, 339, 437, 1041, 1262, 1298, 1540
TspRI	CASTG	3 cut(s)	295, 496, 1447
Tth111I	GACNNNGTC	1 cut(s)	344
Van91I	CCANNNNNTGG	1 cut(s)	1067
VspI	ATTAAT	2 cut(s)	539, 1479
XapI	RAATTY	7 cut(s)	53, 355, 532, 664, 1174, 1305, 1518
XbaI	TCTAGA	1 cut(s)	754
XceI	RCATGY	4 cut(s)	267, 855, 1060, 1492
XcmI	CCANNNNNNNNNTGG	1 cut(s)	340
XmaJI	CCTAGG	1 cut(s)	1034
XmiI	GTMKAC	1 cut(s)	764
XmnI	GAANNNNTTC	1 cut(s)	998
XspI	CTAG	4 cut(s)	486, 683, 755, 1035
Zsp2I	ATGCAT	1 cut(s)	1058

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.