Rh6DG035000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0017235
Physical Location & Seq
Forward (+)
3570462 .. 3573955
3494 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG035000.1

Sequence Viewer

Length: 2091 bp
ATGGTGAAGTCTCAAGGATCAGGAATGGCTTCGAGAGCAGTTGATCATCCTCCACAACAAGCCAGAGTTGTAGGAGGAGGAGGTAAACCAAAGAAGAACAGTTTGGCAGATGGGAGAAACCGAAGAGCACTAAAAGAGATTGGAAACTTGCCAAACATTCGAGGAACTGAACCTAACCCTTGTCGCCGGATAACAAGGAGTTATCGTGCTCAGTTAAAGGCTCAAGCTGCAACAGCTGCTGATATAATTGACCTAGAGAGTTCAGAAGACGAGTTGAGACAAGCAGAAAAGAGTAGTTTTGGTTTTGGGAAAGTAGTGCATCAGACGGCTCATTTTCATGTTATTGACTTAGATAGCTCAGAGGATGAGCAGAGTCAAGCTGTAAAAAGTAAGTTTGCTTCTGGGGGAGTAGCACAATCGGCTAAACAGATTGATGTGATTGAACTTGAAAGTTCAGAAGACGAGCAGAGTCCGAAAGAAAGTGTTGGTGACCACGATCCCAAATGTAGTGTAAGCATGGAGGAGACTCTGCTGATTCCACAGTCTAATGAAGTTGAAAGTACCTTTACTACTGAAGCTTATGAAGTTGAGAATCTTCAAGCTCAAAATGAGATGACTACTCGTGTTGAACCGGAGTCCGTCACTTTGGAGCCCTTGCATGCTGATAGCTTGACTGATGCTTTGACAGAGCAGGTGCGGGTTGATGAGCATTATGTGTGTGATTTCAGTGATCATGGAACAGGAGGAAGGACTGAGTACATTGTGTGTGGACATACAATTGGGAGTGTCTCAGACATTGCAGCTTTTGAAGAAAAGGAGCAACTGGAGATTGGAGCTGCTGACAGCATTGGAGAAGTAGAGGTTGATCTCGAATATGAAGAAGTTGATCAACAAGCTGAAGCACCAGTTGACATTAAGGATTTGGATAAGAAGGGTCAGCTAGAGATTGGAGCAGTGGGGAACATTGTAGAAGTAGATTTGGATCAAGAATATGAAAAACTGTGTGAGCATCTTCAAGCTCAAAGTGAGATACCTACTGGTGCTGAAGTGGAGTTTGTCACTTTGGGTGCCTTGCATTGGGATAACATGAGTGCTTCGAAGGAGAGGGTGAGTGTTGATGGTTATCCTGTATTTGATTACAGAACAATGTCTGACTATGAAGTGTTTGGAAATACTATGGGGAGTATCTCTGACGTTGCATCTTTTGAAGAAAAGGACCAGCCAGAGATTGGAGCAGCTGATGACATTGGAGAAATAGTGGTTGATCTCAAATATAAAGTTGATGAAGAGGCTGAAGCAAAAGTTGACAATGAGGCTTTGGAAGATAAGGGTCTGCCAGAAACTGAATCCAAGGTTTCCATGGTGAATGTTGTAGTTCTGTCTATAATGATTTCAGCATTGATTTCTGTCTTAATCGGATCCACAGCCTTCAGTTATGTGAAGAAAGGAAGCTCAACCTTGAATCTTGCTATCTCTATGTGCCAACAATCACTGCCAAATAAGCAATTGAATGCAAGTCCTGATGTGGCATGTAACACTGCTCACATTTTCCAGCACATACCCTCTTCTTGGAACTGGATTAAAGCGCCATGGCATTCCAAGCTGAGCAGCTTCCAGAAGAGTTCATCATATCGCTTGATAGGACTGCAGGCATCAACTGAAGATGAAGTCCAGGAGAAGAGAGGCGCTACGGACTCTGTCTGTCAACAACCATTGCTGACTAAAAATTTGAGTGCAAGCTCTATGCCAGCTAGCACCACGCAGAATTTTCATTGTGAAATGAAGAGCTTACAGAACAGTTCATTTTACCAAACACAAGGACTGAATGAATCACATGAAGCTGAAAGGCAGGAGAAGGGTGGCTTAGAAAGAACTTTTGAAGAGAGTCCCTGGCTCCAATTGACTCCTCAATGGGATTACTCATATGGGAGTTTTACAACAATTGAGAAAAGCATAATCAAGAATGGACATGCAGATGATGAGTTAATTTCTCCTCAATGGGCTCGCCATCTTTATGGGAGTTTTACAACACAGGAGACATACCCAATCAAGAATGTATCTACAATGCTCATTCCTAGAGTAGACTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

696

Amino Acids

76.66

Weight (kDa)

4.6

Isoelectric Point (pI)

45.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0017235)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03071
rosa_chinensis RchiOBHm_Chr6g0247941
rosa_laevigata RLG00000015171
rosa_multiflora Rmu_sc0006106.1_g000013
rosa_roxburghii Rroxscaffold_180G00433170 Rroxscaffold_7G00213570
rosa_rugosa Rorug05G0529600
rosa_samantha Rh6AG044400 Rh6BG039200 Rh6BG039300 Rh6CG038000 Rh6DG035000
rosa_wichuraiana Rw6G003860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 682
Acc36I ACCTGC 1 cut(s) 682
AccB1I GGYRCC 1 cut(s) 1067
AccB7I CCANNNNNTGG 1 cut(s) 1229
AccI GTMKAC 1 cut(s) 2082
AciI CCGC 1 cut(s) 697
AclWI GGATC 5 cut(s) 25, 491, 990, 1413, 1426
AcsI RAATTY 2 cut(s) 1726, 1765
AcuI CTGAAG 6 cut(s) 594, 918, 1065, 1314, 1414, 1680
AfaI GTAC 2 cut(s) 562, 758
AfiI CCNNNNNNNGG 3 cut(s) 1077, 1229, 1569
AjnI CCWGG 2 cut(s) 1671, 1889
AjuI GAANNNNNNNTTGG 2 cut(s) 86, 118
Alw21I GWGCWC 2 cut(s) 130, 211
Alw26I GTCTC 5 cut(s) 15, 271, 518, 793, 2030
AlwI GGATC 5 cut(s) 25, 491, 990, 1413, 1426
AlwNI CAGNNNCTG 2 cut(s) 239, 1343
ApeKI GCWGC 6 cut(s) 227, 236, 800, 836, 1235, 1608
ApoI RAATTY 2 cut(s) 1726, 1765
ArsI GACNNNNNNTTYG 4 cut(s) 664, 696, 1711, 1743
Asp700I GAANNNNTTC 1 cut(s) 28
AspLEI GCGC 2 cut(s) 1588, 1688
AspS9I GGNCC 1 cut(s) 1216
AsuHPI GGTGA 4 cut(s) 16, 500, 1120, 1375
AsuII TTCGAA 1 cut(s) 1097
AsuNHI GCTAGC 1 cut(s) 1751
AvaII GGWCC 1 cut(s) 1216
BamHI GGATCC 1 cut(s) 1418
BanI GGYRCC 1 cut(s) 1067
BanII GRGCYC 2 cut(s) 654, 2005
BarI GAAGNNNNNNTAC 2 cut(s) 382, 414
BauI CACGAG 1 cut(s) 621
BbsI GAAGAC 2 cut(s) 273, 465
Bbv12I GWGCWC 2 cut(s) 130, 211
BbvI GCAGC 6 cut(s) 214, 223, 812, 823, 1247, 1620
BccI CCATC 3 cut(s) 104, 1112, 2016
BceAI ACGGC 1 cut(s) 342
BciT130I CCWGG 2 cut(s) 1673, 1891
BclI TGATCA 3 cut(s) 43, 730, 886
BcoDI GTCTC 5 cut(s) 15, 271, 518, 793, 2030
BfaI CTAG 4 cut(s) 254, 941, 1752, 2076
BfmI CTRYAG 1 cut(s) 1646
BfoI RGCGCY 2 cut(s) 1589, 1689
BfuAI ACCTGC 1 cut(s) 682
BisI GCNGC 6 cut(s) 228, 237, 801, 837, 1236, 1609
BlpI GCTNAGC 1 cut(s) 1604
BlsI GCNGC 6 cut(s) 229, 238, 802, 838, 1237, 1610
Bme1390I CCNGG 2 cut(s) 1673, 1891
Bme18I GGWCC 1 cut(s) 1216
BmgT120I GGNCC 1 cut(s) 1216
BmiI GGNNCC 4 cut(s) 651, 1069, 1420, 1895
BmrFI CCNGG 2 cut(s) 1673, 1891
BmsI GCATC 5 cut(s) 328, 667, 1018, 1208, 1661
BmtI GCTAGC 1 cut(s) 1755
BpiI GAAGAC 2 cut(s) 273, 465
BpmI CTGGAG 1 cut(s) 845
Bpu1102I GCTNAGC 1 cut(s) 1604
Bpu14I TTCGAA 1 cut(s) 1097
BpuEI CTTGAG 1 cut(s) 207
BsaBI GATNNNNATC 2 cut(s) 981, 1122
BsaJI CCNNGG 4 cut(s) 1350, 1359, 1589, 1889
BsaWI WCCGGW 1 cut(s) 631
BsaXI ACNNNNNCTCC 4 cut(s) 190, 220, 1242, 1272
Bsc4I CCNNNNNNNGG 3 cut(s) 1077, 1229, 1569
Bse1I ACTGG 4 cut(s) 828, 905, 1042, 1580
Bse3DI GCAATG 2 cut(s) 795, 1712
Bse8I GATNNNNATC 2 cut(s) 981, 1122
BseBI CCWGG 2 cut(s) 1673, 1891
BseDI CCNNGG 4 cut(s) 1350, 1359, 1589, 1889
BseGI GGATG 2 cut(s) 46, 370
BseJI GATNNNNATC 2 cut(s) 981, 1122
BseLI CCNNNNNNNGG 3 cut(s) 1077, 1229, 1569
BseMI GCAATG 2 cut(s) 795, 1712
BseMII CTCAG 5 cut(s) 224, 372, 744, 804, 1595
BseNI ACTGG 4 cut(s) 828, 905, 1042, 1580
BseRI GAGGAG 5 cut(s) 90, 93, 536, 1896, 1983
BseXI GCAGC 6 cut(s) 214, 223, 812, 823, 1247, 1620
BshNI GGYRCC 1 cut(s) 1067
BsiHKAI GWGCWC 2 cut(s) 130, 211
BsiSI CCGG 2 cut(s) 187, 632
BslFI GGGAC 1 cut(s) 1872
BslI CCNNNNNNNGG 3 cut(s) 1077, 1229, 1569
BsmAI GTCTC 5 cut(s) 15, 271, 518, 793, 2030
BsmFI GGGAC 1 cut(s) 1872
BsmI GAATGC 2 cut(s) 1516, 1594
Bsp119I TTCGAA 1 cut(s) 1097
Bsp1286I GDGCHC 4 cut(s) 130, 211, 654, 2005
Bsp143I GATC 9 cut(s) 17, 43, 496, 730, 865, 886, 982, 1264, 1418
Bsp1720I GCTNAGC 1 cut(s) 1604
Bsp19I CCATGG 2 cut(s) 1359, 1589
BspACI CCGC 1 cut(s) 697
BspCNI CTCAG 5 cut(s) 223, 371, 745, 803, 1596
BspLI GGNNCC 4 cut(s) 651, 1069, 1420, 1895
BspMAI CTGCAG 1 cut(s) 1650
BspMI ACCTGC 1 cut(s) 682
BspOI GCTAGC 1 cut(s) 1755
BspPI GGATC 5 cut(s) 25, 491, 990, 1413, 1426
BspQI GCTCTTC 2 cut(s) 118, 1778
BspT104I TTCGAA 1 cut(s) 1097
BspT107I GGYRCC 1 cut(s) 1067
BsrDI GCAATG 2 cut(s) 795, 1712
BsrI ACTGG 4 cut(s) 828, 905, 1042, 1580
BssECI CCNNGG 4 cut(s) 1350, 1359, 1589, 1889
BssMI GATC 9 cut(s) 17, 43, 496, 730, 865, 886, 982, 1264, 1418
BssSI CACGAG 1 cut(s) 621
BssT1I CCWWGG 3 cut(s) 1350, 1359, 1589
Bst2BI CACGAG 1 cut(s) 621
Bst2UI CCWGG 2 cut(s) 1673, 1891
Bst4CI ACNGT 4 cut(s) 101, 543, 1002, 1799
Bst6I CTCTTC 7 cut(s) 118, 1281, 1570, 1613, 1673, 1778, 1875
BstAPI GCANNNNNTGC 1 cut(s) 236
BstBI TTCGAA 1 cut(s) 1097
BstC8I GCNNGC 6 cut(s) 660, 1650, 1738, 1749, 1753, 2005
BstDEI CTNAG 7 cut(s) 210, 349, 358, 753, 790, 1604, 1864
BstDSI CCRYGG 2 cut(s) 1359, 1589
BstEII GGTNACC 1 cut(s) 488
BstF5I GGATG 2 cut(s) 46, 370
BstH2I RGCGCY 2 cut(s) 1589, 1689
BstHHI GCGC 2 cut(s) 1588, 1688
BstKTI GATC 9 cut(s) 20, 46, 499, 733, 868, 889, 985, 1267, 1421
BstMAI GTCTC 5 cut(s) 15, 271, 518, 793, 2030
BstMBI GATC 9 cut(s) 17, 43, 496, 730, 865, 886, 982, 1264, 1418
BstMWI GCNNNNNNNGC 7 cut(s) 35, 227, 233, 236, 419, 1501, 1600
BstNI CCWGG 2 cut(s) 1673, 1891
BstNSI RCATGY 3 cut(s) 662, 1533, 1973
BstPI GGTNACC 1 cut(s) 488
BstSCI CCNGG 2 cut(s) 1671, 1889
BstSFI CTRYAG 1 cut(s) 1646
BstV1I GCAGC 6 cut(s) 214, 223, 812, 823, 1247, 1620
BstV2I GAAGAC 2 cut(s) 273, 465
BstX2I RGATCY 1 cut(s) 1418
BstXI CCANNNNNNTGG 1 cut(s) 2015
BstYI RGATCY 1 cut(s) 1418
BtgI CCRYGG 2 cut(s) 1359, 1589
BtsCI GGATG 2 cut(s) 46, 370
BtsI GCAGTG 3 cut(s) 960, 1490, 1536
BtsIMutI CAGTG 4 cut(s) 733, 960, 1490, 1536
BveI ACCTGC 1 cut(s) 682
Cac8I GCNNGC 6 cut(s) 660, 1650, 1738, 1749, 1753, 2005
CaiI CAGNNNCTG 2 cut(s) 239, 1343
CfoI GCGC 2 cut(s) 1588, 1688
Cfr13I GGNCC 1 cut(s) 1216
Csp6I GTAC 2 cut(s) 561, 757
CviQI GTAC 2 cut(s) 561, 757
DdeI CTNAG 7 cut(s) 210, 349, 358, 753, 790, 1604, 1864
DpnI GATC 9 cut(s) 19, 45, 498, 732, 867, 888, 984, 1266, 1420
DpnII GATC 9 cut(s) 17, 43, 496, 730, 865, 886, 982, 1264, 1418
Eam1104I CTCTTC 7 cut(s) 118, 1281, 1570, 1613, 1673, 1778, 1875
EarI CTCTTC 7 cut(s) 118, 1281, 1570, 1613, 1673, 1778, 1875
Eco130I CCWWGG 3 cut(s) 1350, 1359, 1589
Eco24I GRGCYC 2 cut(s) 654, 2005
Eco47I GGWCC 1 cut(s) 1216
Eco57I CTGAAG 6 cut(s) 594, 918, 1065, 1314, 1414, 1680
Eco91I GGTNACC 1 cut(s) 488
EcoO65I GGTNACC 1 cut(s) 488
EcoRII CCWGG 2 cut(s) 1671, 1889
EcoT14I CCWWGG 3 cut(s) 1350, 1359, 1589
EcoT38I GRGCYC 2 cut(s) 654, 2005
ErhI CCWWGG 3 cut(s) 1350, 1359, 1589
FalI AAGNNNNNCTT 2 cut(s) 1847, 1879
FaqI GGGAC 1 cut(s) 1872
FauI CCCGC 1 cut(s) 690
FauNDI CATATG 1 cut(s) 1924
FbaI TGATCA 3 cut(s) 43, 730, 886
FblI GTMKAC 1 cut(s) 2082
Fnu4HI GCNGC 6 cut(s) 228, 237, 801, 837, 1236, 1609
FokI GGATG 2 cut(s) 33, 377
FriOI GRGCYC 2 cut(s) 654, 2005
Fsp4HI GCNGC 6 cut(s) 228, 237, 801, 837, 1236, 1609
FspBI CTAG 4 cut(s) 254, 941, 1752, 2076
GlaI GCGC 2 cut(s) 1587, 1687
GluI GCNGC 6 cut(s) 228, 237, 801, 837, 1236, 1609
GsuI CTGGAG 1 cut(s) 845
HaeII RGCGCY 2 cut(s) 1589, 1689
HapII CCGG 2 cut(s) 187, 632
HhaI GCGC 2 cut(s) 1588, 1688
Hin6I GCGC 2 cut(s) 1586, 1686
HinP1I GCGC 2 cut(s) 1586, 1686
HincII GTYRAC 3 cut(s) 910, 1306, 1706
HindII GTYRAC 3 cut(s) 910, 1306, 1706
HindIII AAGCTT 1 cut(s) 576
HpaII CCGG 2 cut(s) 187, 632
HphI GGTGA 4 cut(s) 16, 500, 1120, 1375
Hpy166II GTNNAC 6 cut(s) 86, 770, 910, 1306, 1706, 2083
Hpy188I TCNGA 9 cut(s) 265, 324, 361, 457, 474, 793, 1153, 1192, 1418
Hpy188III TCNNGA 8 cut(s) 21, 33, 869, 986, 1520, 1615, 1960, 2050
Hpy8I GTNNAC 6 cut(s) 86, 770, 910, 1306, 1706, 2083
HpyAV CCTTC 5 cut(s) 741, 925, 1093, 1438, 1849
HpyCH4III ACNGT 4 cut(s) 101, 543, 1002, 1799
HpyCH4IV ACGT 1 cut(s) 1194
HpyF10VI GCNNNNNNNGC 7 cut(s) 35, 227, 233, 236, 419, 1501, 1600
HpyF3I CTNAG 7 cut(s) 210, 349, 358, 753, 790, 1604, 1864
HpySE526I ACGT 1 cut(s) 1194
HspAI GCGC 2 cut(s) 1586, 1686
Ksp22I TGATCA 3 cut(s) 43, 730, 886
Kzo9I GATC 9 cut(s) 17, 43, 496, 730, 865, 886, 982, 1264, 1418
LguI GCTCTTC 2 cut(s) 118, 1778
LmnI GCTCC 6 cut(s) 649, 817, 833, 950, 1232, 1899
Lsp1109I GCAGC 6 cut(s) 214, 223, 812, 823, 1247, 1620
LweI GCATC 5 cut(s) 328, 667, 1018, 1208, 1661
MaeI CTAG 4 cut(s) 254, 941, 1752, 2076
MaeII ACGT 1 cut(s) 1194
MaeIII GTNAC 4 cut(s) 488, 640, 1057, 1532
MalI GATC 9 cut(s) 19, 45, 498, 732, 867, 888, 984, 1266, 1420
MboI GATC 9 cut(s) 17, 43, 496, 730, 865, 886, 982, 1264, 1418
MfeI CAATTG 4 cut(s) 777, 1505, 1898, 1941
MflI RGATCY 1 cut(s) 1418
MhlI GDGCHC 4 cut(s) 130, 211, 654, 2005
MluCI AATT 8 cut(s) 246, 777, 1505, 1726, 1765, 1898, 1941, 1986
MlyI GAGTC 8 cut(s) 382, 478, 520, 644, 1688, 1894, 1897, 2078
MroXI GAANNNNTTC 1 cut(s) 28
MseI TTAA 5 cut(s) 215, 915, 1412, 1581, 1985
MslI CAYNNNNRTG 3 cut(s) 336, 1974, 2013
MspA1I CMGCKG 2 cut(s) 236, 1238
MspI CCGG 2 cut(s) 187, 632
MspR9I CCNGG 2 cut(s) 1673, 1891
MunI CAATTG 4 cut(s) 777, 1505, 1898, 1941
Mva1269I GAATGC 2 cut(s) 1516, 1594
MvaI CCWGG 2 cut(s) 1673, 1891
MwoI GCNNNNNNNGC 7 cut(s) 35, 227, 233, 236, 419, 1501, 1600
NcoI CCATGG 2 cut(s) 1359, 1589
NdeI CATATG 1 cut(s) 1924
NdeII GATC 9 cut(s) 17, 43, 496, 730, 865, 886, 982, 1264, 1418
NheI GCTAGC 1 cut(s) 1751
NlaIV GGNNCC 4 cut(s) 651, 1069, 1420, 1895
NmuCI GTSAC 3 cut(s) 488, 640, 1057
NspI RCATGY 3 cut(s) 662, 1533, 1973
NspV TTCGAA 1 cut(s) 1097
PaeI GCATGC 1 cut(s) 662
PaqCI CACCTGC 1 cut(s) 682
PciSI GCTCTTC 2 cut(s) 118, 1778
PctI GAATGC 2 cut(s) 1516, 1594
PdmI GAANNNNTTC 1 cut(s) 28
PfeI GAWTC 5 cut(s) 535, 592, 1346, 1462, 1829
PflFI GACNNNGTC 1 cut(s) 1697
PflMI CCANNNNNTGG 1 cut(s) 1229
PfoI TCCNGGA 1 cut(s) 1671
PkrI GCNGC 6 cut(s) 229, 238, 802, 838, 1237, 1610
PleI GAGTC 8 cut(s) 381, 477, 520, 643, 1688, 1893, 1897, 2078
PpsI GAGTC 8 cut(s) 381, 477, 520, 643, 1688, 1893, 1897, 2078
Psp6I CCWGG 2 cut(s) 1671, 1889
PspEI GGTNACC 1 cut(s) 488
PspGI CCWGG 2 cut(s) 1671, 1889
PspN4I GGNNCC 4 cut(s) 651, 1069, 1420, 1895
PspPI GGNCC 1 cut(s) 1216
PstI CTGCAG 1 cut(s) 1650
PstNI CAGNNNCTG 2 cut(s) 239, 1343
PsuI RGATCY 1 cut(s) 1418
PsyI GACNNNGTC 1 cut(s) 1697
PvuII CAGCTG 2 cut(s) 236, 1238
RsaI GTAC 2 cut(s) 562, 758
RsaNI GTAC 2 cut(s) 561, 757
RseI CAYNNNNRTG 3 cut(s) 336, 1974, 2013
SapI GCTCTTC 2 cut(s) 118, 1778
SaqAI TTAA 5 cut(s) 215, 915, 1412, 1581, 1985
SatI GCNGC 6 cut(s) 228, 237, 801, 837, 1236, 1609
Sau3AI GATC 9 cut(s) 17, 43, 496, 730, 865, 886, 982, 1264, 1418
Sau96I GGNCC 1 cut(s) 1216
SchI GAGTC 8 cut(s) 382, 478, 520, 644, 1688, 1894, 1897, 2078
ScrFI CCNGG 2 cut(s) 1673, 1891
SduI GDGCHC 4 cut(s) 130, 211, 654, 2005
SfaNI GCATC 5 cut(s) 328, 667, 1018, 1208, 1661
SfcI CTRYAG 1 cut(s) 1646
SfuI TTCGAA 1 cut(s) 1097
SinI GGWCC 1 cut(s) 1216
SmiMI CAYNNNNRTG 3 cut(s) 336, 1974, 2013
SmlI CTYRAG 2 cut(s) 12, 222
SmoI CTYRAG 2 cut(s) 12, 222
SphI GCATGC 1 cut(s) 662
Sse9I AATT 8 cut(s) 246, 777, 1505, 1726, 1765, 1898, 1941, 1986
SsiI CCGC 1 cut(s) 697
SspMI CTAG 4 cut(s) 254, 941, 1752, 2076
StyD4I CCNGG 2 cut(s) 1671, 1889
StyI CCWWGG 3 cut(s) 1350, 1359, 1589
TaaI ACNGT 4 cut(s) 101, 543, 1002, 1799
TaiI ACGT 1 cut(s) 1197
TaqI TCGA 4 cut(s) 32, 160, 870, 1097
TasI AATT 8 cut(s) 246, 777, 1505, 1726, 1765, 1898, 1941, 1986
TatI WGTACW 1 cut(s) 756
TfiI GAWTC 5 cut(s) 535, 592, 1346, 1462, 1829
Tru1I TTAA 5 cut(s) 215, 915, 1412, 1581, 1985
Tru9I TTAA 5 cut(s) 215, 915, 1412, 1581, 1985
TscAI CASTG 4 cut(s) 733, 960, 1497, 1543
TseFI GTSAC 3 cut(s) 488, 640, 1057
TseI GCWGC 6 cut(s) 227, 236, 800, 836, 1235, 1608
Tsp45I GTSAC 3 cut(s) 488, 640, 1057
TspGWI ACGGA 2 cut(s) 628, 1706
TspRI CASTG 4 cut(s) 733, 960, 1497, 1543
Tth111I GACNNNGTC 1 cut(s) 1697
Van91I CCANNNNNTGG 1 cut(s) 1229
VpaK11BI GGWCC 1 cut(s) 1216
XapI RAATTY 2 cut(s) 1726, 1765
XceI RCATGY 3 cut(s) 662, 1533, 1973
XcmI CCANNNNNNNNNTGG 2 cut(s) 1226, 1357
XmiI GTMKAC 1 cut(s) 2082
XmnI GAANNNNTTC 1 cut(s) 28
XspI CTAG 4 cut(s) 254, 941, 1752, 2076
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.