Rh6DG451500

Nucleoredoxin

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Reverse (-)
62376774 .. 62377118
345 bp
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UTR
Exon/CDS
Intron
Rh6DG451500.1

Sequence Viewer

Length: 345 bp
ATGCCATGGCCTGCCATCCCCTACCGTGATAAAACAAGACAAGACCTTTGCCGAATCTTTAACATTAAAGAGATTCCGGCTTTGGTTTTAATTGGACCAGATGGGAAGGCTGTTAGCACAAAGGGGAGGGCTTTGATCTCTTTGCATGGCGCAAAAGCTTTCCCATTTACAGAGTTGAGGATCAAAGAGGTCGAAGCAGCCTTGGGAAAAGAAGGAGAGGCATTGCCTCCTCAAGCGAAGGATATAAAGCGTGAGCATATGTATGTGATTTTTGCAGGAAGCAAGCGAGGTTCTGGGCATTTTCGTCTGATGTTTGTTACTATGACCTTCATCCAACGTGCGTAG

Protein Analysis

114

Amino Acids

12.79

Weight (kDa)

10.0

Isoelectric Point (pI)

33.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 188
AluBI AGCT 1 cut(s) 158
AluI AGCT 1 cut(s) 158
AlwI GGATC 1 cut(s) 188
AoxI GGCC 1 cut(s) 8
ApeKI GCWGC 1 cut(s) 197
ArsI GACNNNNNNTTYG 2 cut(s) 30, 62
AspLEI GCGC 1 cut(s) 152
AspS9I GGNCC 1 cut(s) 95
AvaII GGWCC 1 cut(s) 95
BbvI GCAGC 1 cut(s) 209
BccI CCATC 2 cut(s) 23, 95
BisI GCNGC 1 cut(s) 198
BlsI GCNGC 1 cut(s) 199
Bme18I GGWCC 1 cut(s) 95
BmgT120I GGNCC 1 cut(s) 95
BpuEI CTTGAG 1 cut(s) 216
BsaJI CCNNGG 2 cut(s) 5, 201
Bse3DI GCAATG 1 cut(s) 221
BseDI CCNNGG 2 cut(s) 5, 201
BseGI GGATG 2 cut(s) 15, 330
BseMI GCAATG 1 cut(s) 221
BseRI GAGGAG 1 cut(s) 219
BseXI GCAGC 1 cut(s) 209
BshFI GGCC 1 cut(s) 10
BsiSI CCGG 1 cut(s) 77
BsnI GGCC 1 cut(s) 10
Bsp143I GATC 2 cut(s) 135, 180
Bsp19I CCATGG 1 cut(s) 5
BspANI GGCC 1 cut(s) 10
BspPI GGATC 1 cut(s) 188
BsrDI GCAATG 1 cut(s) 221
BssECI CCNNGG 2 cut(s) 5, 201
BssMI GATC 2 cut(s) 135, 180
BssT1I CCWWGG 2 cut(s) 5, 201
Bst4CI ACNGT 1 cut(s) 26
BstC8I GCNNGC 2 cut(s) 12, 284
BstDSI CCRYGG 1 cut(s) 5
BstF5I GGATG 2 cut(s) 15, 330
BstHHI GCGC 1 cut(s) 152
BstKTI GATC 2 cut(s) 138, 183
BstMBI GATC 2 cut(s) 135, 180
BstV1I GCAGC 1 cut(s) 209
BsuRI GGCC 1 cut(s) 10
BtgI CCRYGG 1 cut(s) 5
BtsCI GGATG 2 cut(s) 15, 330
Cac8I GCNNGC 2 cut(s) 12, 284
CfoI GCGC 1 cut(s) 152
Cfr13I GGNCC 1 cut(s) 95
CviAII CATG 2 cut(s) 6, 146
CviJI RGCY 6 cut(s) 10, 80, 110, 131, 158, 200
CviKI_1 RGCY 6 cut(s) 10, 80, 110, 131, 158, 200
DpnI GATC 2 cut(s) 137, 182
DpnII GATC 2 cut(s) 135, 180
Eco130I CCWWGG 2 cut(s) 5, 201
Eco47I GGWCC 1 cut(s) 95
EcoT14I CCWWGG 2 cut(s) 5, 201
ErhI CCWWGG 2 cut(s) 5, 201
FaeI CATG 2 cut(s) 9, 149
FaiI YATR 7 cut(s) 7, 147, 245, 258, 260, 264, 323
FatI CATG 2 cut(s) 5, 145
FauNDI CATATG 1 cut(s) 258
Fnu4HI GCNGC 1 cut(s) 198
FokI GGATG 2 cut(s) 2, 317
Fsp4HI GCNGC 1 cut(s) 198
GlaI GCGC 1 cut(s) 151
GluI GCNGC 1 cut(s) 198
HaeIII GGCC 1 cut(s) 10
HapII CCGG 1 cut(s) 77
HhaI GCGC 1 cut(s) 152
Hin1II CATG 2 cut(s) 9, 149
Hin6I GCGC 1 cut(s) 150
HinP1I GCGC 1 cut(s) 150
HindIII AAGCTT 1 cut(s) 156
HinfI GANTC 2 cut(s) 54, 73
HpaII CCGG 1 cut(s) 77
Hpy188I TCNGA 1 cut(s) 309
HpyAV CCTTC 4 cut(s) 100, 206, 232, 337
HpyCH4III ACNGT 1 cut(s) 26
HpyCH4IV ACGT 1 cut(s) 337
HpyCH4V TGCA 2 cut(s) 145, 275
HpySE526I ACGT 1 cut(s) 337
Hsp92II CATG 2 cut(s) 9, 149
HspAI GCGC 1 cut(s) 150
Kzo9I GATC 2 cut(s) 135, 180
LpnPI CCDG 5 cut(s) 24, 90, 111, 261, 279
Lsp1109I GCAGC 1 cut(s) 209
MaeII ACGT 1 cut(s) 337
MaeIII GTNAC 1 cut(s) 316
MalI GATC 2 cut(s) 137, 182
MboI GATC 2 cut(s) 135, 180
MluCI AATT 1 cut(s) 90
MnlI CCTC 7 cut(s) 120, 171, 181, 211, 237, 240, 281
MseI TTAA 3 cut(s) 60, 66, 89
MslI CAYNNNNRTG 1 cut(s) 261
MspI CCGG 1 cut(s) 77
NcoI CCATGG 1 cut(s) 5
NdeI CATATG 1 cut(s) 258
NdeII GATC 2 cut(s) 135, 180
NlaIII CATG 2 cut(s) 9, 149
PfeI GAWTC 2 cut(s) 54, 73
PkrI GCNGC 1 cut(s) 199
PspPI GGNCC 1 cut(s) 95
RseI CAYNNNNRTG 1 cut(s) 261
SaqAI TTAA 3 cut(s) 60, 66, 89
SatI GCNGC 1 cut(s) 198
Sau3AI GATC 2 cut(s) 135, 180
Sau96I GGNCC 1 cut(s) 95
SetI ASST 6 cut(s) 48, 160, 192, 292, 329, 340
SinI GGWCC 1 cut(s) 95
SmiMI CAYNNNNRTG 1 cut(s) 261
SmlI CTYRAG 1 cut(s) 231
SmoI CTYRAG 1 cut(s) 231
Sse9I AATT 1 cut(s) 90
StyI CCWWGG 2 cut(s) 5, 201
TaaI ACNGT 1 cut(s) 26
TaiI ACGT 1 cut(s) 340
TaqI TCGA 1 cut(s) 192
TasI AATT 1 cut(s) 90
TfiI GAWTC 2 cut(s) 54, 73
Tru1I TTAA 3 cut(s) 60, 66, 89
Tru9I TTAA 3 cut(s) 60, 66, 89
TseI GCWGC 1 cut(s) 197
TspDTI ATGAA 1 cut(s) 319
VpaK11BI GGWCC 1 cut(s) 95
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.