Rh7AG057800

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0009576
Physical Location & Seq
Reverse (-)
3968881 .. 3975648
6768 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG057800.1

Sequence Viewer

Length: 4404 bp
ATGTATGGCCAAGCTAATTATGGTGCGCCGTTCGGCCAGGGTCAGCCACCGATGCCACCTGCAAACCAACAGGGTCCGCCTCCACCTTCCCTTCAGTTCCAACAAGGCTCTCCGGCACCACTGCCAAATGTAGTTCAGCAGGCTATATCTGCAGTCCCACCTCAGATAGGTCAGCCGGGTCCTTATTTATATCAGCACGGTTCTGTTGCCCCACCTCCCGCTGCTCCGTTCAGTGGGATGCCAAATACAGGTCAATCTTACGGACACGCCAATCCAGCAGTCCATGGAAGCACATGGCATAACGTGCAACATGCTTCAGCAACAGGAAACCAGAATTTCCAACCGATTCATCCACCAGCACTTGTGACTCCTCATGCTTTGTCTCCTTACCCAAACATGTCACAGGCTGCAATACCACATGGAGCATTACCTCCTCCTCCTCCTCCTCCTCCTCCTCTCCCGTCGACTAATACTACTTCTGGTTGTGCTGCACAAGGACCAGCATCGTATAAAGCTTTGTCTCCAGCACAACCACAGGCCGGTCTTCCGCATGAGGGCTCCCATAATTTTGAAGGTGGAAGTGAGCGTGAAGCAGGTTCTCTAGCTAGAGATGGAGTATCATCAAATGGAAGTGTGATGTTGGATTTTTCTTCACCTCCACCTAAGCCATCAGATAAGATTGATTCTCTCTGCCAGCTTACTGCTATGAATGAAGGGAAAATTGAATCACCATTGAAGTCTTCGTGGATTGACTCTTCATCTCAACCTGACCATTTTATCGTCTCTTCAGGTTGTAGCTTGCCTGCTGATTCTGACATGGAGATGGAAGATGATATCACCTTGTCTGACGGAGATCAGGAAGTTCATGATTCATCTAACGCTCTAAACCGCAAGTCTGATGTCAGTCATGGGGAGATTGATGCCAAAAAGCACCTACATGGAGCACAGAGTTCACTAGGATGGACTGCAGCCCAGGGTGTCTCATGTGAAAATGTGTCGTCCTCTTTGTCCCAATGCCAATTGATGATTGAAAAGGTGCCATCTAGAGTTGATATTTATTCAACTGAAGCTTCTGAAACCCCTTTGACAAGTGAGCGAGATAAAACTTCTATTCCCATAGCTGATGATCAGAACACACTTGATGCTTCTGCAGCGGCTGAGGCAATAAATTCAGACGGGTTTTCTAACCAGATCACCGCAGTTAACAGTCCATTTAGACTTCTACAAGACTATACTTCTGAAAACAGCTCAGAAAATGATCCTCATGCTTTCTTTGAAGATGCTAATGTTGTTAGAACTTCATCATCAGTTACAGCTAGTGTTAAAAGTAGCCATAAAGATGCTGGGTCTCAATTTGCGACAGGATCTAAGAGCCCATGCATGACTGATAAATTGTCTAGTCTGCAATATGAATCCAGGAGGTCCAAATTTTCCTTGGATACAAAAAAAGAGGTTAAGGGTACCGGTACAACATTAATCATTAAGAGTCATGAGGCCTTCCGGGGAAAAGAGGCGTTGAGTGGTGCTCCTATTGATATAGTTTCCAAAAGGGATGAGTCTCAGGAGGGGCAAAAGACCAAGTCTGAATCTGTCCTGCCGAAGGTGGATGAGTATGGGAGATTGGTCAGAGAAGGTTCCACTGACAGTAACTCTGATGGTTCACGTTATAATAAGAGGCGTAAAAGAGGCAGAAGCAGAAGCCGCAGCCGCAGTCGCAGCCGTATCCGGAGCCGGAGCCGGAGCCGGAGCCGCAGTTGTAGCCGGTCTCCTCTTGACAGCAGGAGGAGGAGGAGGAGTCCTCGGAGGAGAAGAGAGAAGCGAAACCGTTCTCCCAGTTGGTCTTCTAGGAATCATAGAAGCAGGAGCAGGTCTCCCACTTTTAGGCGTGCAGGTGATTTCAGAGATGAAAATAAGAGACAGGACAGGCGCCACATTCCAGAATGCTTTGACTTCCTTAGAGGCAGATGCTTCCGTGGAGCATCCTGTCGGTATATGCACCGTGCACATGACCAAAGTGATGGTTCATGGCGCCATAGGAGCAACCAAAAGCATCTAGAAGTTCAGCCTAGTGTGAAGAACTCTAGGATTAAGGAAGAGATTGAAGATAGCTCTGACATGAATCCGCATGGTGAAATCAAAGGTCAAGAGATGCAACAACGTCAAGATGTGGCTGCAAAAGATGGTCAATTTATTGATCCTGATAAAAATGATTGTGAGAGCTCTAGAGTGACAGCTGCTACAATGCAACTGAAACAAAATTTTCAAGTAAAGTCGGAAGGAACCATCGGTCACAATCCTGAATCTCACCAGCCATCCCCTCAGATGTTCAGCTATGCTGATAATATGAAGTCATGGGGTGATACTTCTCAGGCTATTGAACAATCTCGAAGCAATAATTCTGCAGGACAGCTTCAGAAGGCTGATTTTTCGTCTCAGCAGATGGAAGCCTCTCTCATATCTGATTCACCACCTGATCGAGCATCCAAGATTTCTCCAAATAAGGTTTCTAGTATTGAACATGCAACAGATGCACTCTTATCAACTCATTCACGTCCCACTGAATGTTCTAATACTCAACCACTTTCATCAGGACAGTTTTTATCACAGTATATGGCTCCTAAAGAGTCACCTCTTCCCAGTTTTTCTGCTGCAAATAGTCCATATCCGTCACAGCTGCCTCCTCCTCCTCCTCCTCCTCCTTCACTATCACAAGGTACCAGTGTTGCTCATGTGCCACAGGTGCATAGGGACTACAACCAGAGGCCACCCTATCCAGTTCAGTCCATTCCTACAGGAATGATTCATTCTTATCAAGGTCCCTTACCCAACCAACCTACCCAATTCTCGGTGTCACAAGATTCACCTTGGACATCCTTGCCGCCGCCACCTCCACGACCACCGTATGATTCATCTTTAAATGCAGGAACTGCTGCACGAGGTGCTTCTTCACAATTTCAGCAGAATAACTTGGCTCCAAGGAGTGACTTCAGTTCTCAGAGTTCTATGAGGCCTTACGGCTCTTACCCAACTGAATCCCCTCATTCTAAGGGTGACTTTCTGCATCAGATGTACCCTACATTGTCAGAGCTTCCTCATCCTCTACCGAACAGGGAAGATTTCGGATCAGGCAATCCATCAAATCAACCTTTTGGGGGCCCTGGTCATATGAGAGAAGATCGCTTTACACATGCTCCTGTGCAGGATGTAAATCCTTCACATTCTTTTGCTCAAGGACACCTACACCCTGAACCTGCACCTTCTTCACAGGAGTTAACAAGGATCAAAATGCAAAATTTCTCTGGTGACAATTTTCCATCTGGAGAACTTTTAAATTCATCATCACAAATTCATCCTCATTCACATAACCAACAGCCAAGCTATGGTGTGCAATACTCTGTGGGTGATAGTATTTTGGGTGTGCCTGGGAAGACTGGTGTACAACACCCTGTAGGTGGAAGCATTTTGGGTTTGCCTGGGAAAGATGGCCCCATGTCCCGATACCCTCCAGATATGCTGGACAGGAGTCAGTTTTCTCAAGTTCCTGATTTTGGGGCATCTAGAATTCAAACACATCATAATCCTTACGCAGCTACTTTTGAGCAGCCTCTAAGCTCCAAATTCAGTTCTAACATTCTCATTCAAGAAAAGAATGCACCCGGTGGTAACATGTTTGATACACCAGTCCAAGTCCCAGTTGATGGGCAAGGTGTTGGCAGTGCTGGGTCAAGACAGACAACTTCCTCGCCGAGTTCTGCTAGAGCTGGTGGTCAGCTTTTGCCCAAGTCAGATTGTGAGCAGTATGATCCACTTTTTGACAGCATTGAGCCATCAGGAAATCCACTCAATAAACATGATCACAGCCAAAAGCATATACCCACCATTGATTCAAATATGATGGTGAGGCTCAGTGGTTCTTGTGAGCCATTAGATGTAGAAGAGAACAACAAACATACAGAGGTTCGCCCTGTTGCTTCGGCTACATCTCTGGATAATGACGGCTATGGTGAGACAGCAGATGCAGAAGTGGGTGTTGTTGAGGATGAGAGTCTTAGTAATGATGATGGTGCAGCAAACATGGCTGTAGGAGAGATGGAGATTGATCAGGTGAAATCTGGAGGGAAGAGCAAGAAGAAAAAGGATTCCAGATCAACGAGACTTTTCAAGAGTGCTGTTGCAGATTTTGTAAAGGATCTTCTGAAGCCGTCATGGCGGCAGGGTAATATGAGCAAAGAAGCTTTCAAGACCATTGTCAAAAAGACTGTTGATAAGGTTTCTGGAGCCATGAAGAGCCACCAGATACCGAAGTCCGAAGCAAAGATAAATCACTACATTGACTCGTCTCAGCGGAAACTGACAAAGCTTGTGATGGTAACTACTTTTTTCTTACTCGTTTCTGCTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Surp

Protein Analysis

1467

Amino Acids

159.53

Weight (kDa)

7.52

Isoelectric Point (pI)

68.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SCAF11-like_C PF23030 1381 - 1449 3.2e-06 SCAF11-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1668
AarI CACCTGC 2 cut(s) 67, 1880
Acc36I ACCTGC 5 cut(s) 67, 584, 1857, 1880, 3259
Acc65I GGTACC 2 cut(s) 1460, 2714
AccB1I GGYRCC 6 cut(s) 115, 1036, 1460, 1926, 2028, 2714
AccB7I CCANNNNNTGG 2 cut(s) 3380, 3698
AccI GTMKAC 1 cut(s) 464
AccIII TCCGGA 1 cut(s) 1725
AclWI GGATC 7 cut(s) 1253, 1372, 2189, 3130, 3287, 3797, 4197
AcoI YGGCCR 2 cut(s) 7, 34
AcsI RAATTY 9 cut(s) 334, 1168, 1427, 2257, 3292, 3331, 3345, 3561, 3617
AcuI CTGAAG 7 cut(s) 77, 300, 771, 1086, 2396, 2971, 4217
AcyI GRCGYC 2 cut(s) 1927, 2029
AdeI CACNNNGTG 2 cut(s) 2939, 3659
AfaI GTAC 5 cut(s) 1462, 1468, 2716, 3071, 3438
AflIII ACRYGT 2 cut(s) 396, 3666
AgeI ACCGGT 1 cut(s) 1463
AjiI CACGTC 1 cut(s) 2552
AjnI CCWGG 6 cut(s) 36, 972, 1415, 3157, 3421, 3472
AjuI GAANNNNNNNTTGG 2 cut(s) 2488, 2520
Alw21I GWGCWC 4 cut(s) 946, 1528, 2005, 2222
Alw44I GTGCAC 1 cut(s) 2001
AlwI GGATC 7 cut(s) 1253, 1372, 2189, 3130, 3287, 3797, 4197
AlwNI CAGNNNCTG 2 cut(s) 1157, 2927
Aor13HI TCCGGA 1 cut(s) 1725
AoxI GGCC 8 cut(s) 7, 34, 537, 1494, 2762, 3008, 3154, 3484
ApaI GGGCCC 1 cut(s) 3158
ApaLI GTGCAC 1 cut(s) 2001
ApoI RAATTY 9 cut(s) 334, 1168, 1427, 2257, 3292, 3331, 3345, 3561, 3617
AseI ATTAAT 1 cut(s) 1475
AsiGI ACCGGT 1 cut(s) 1463
Asp700I GAANNNNTTC 1 cut(s) 1825
Asp718I GGTACC 2 cut(s) 1460, 2714
AspLEI GCGC 3 cut(s) 28, 1929, 2031
AspS9I GGNCC 8 cut(s) 74, 179, 497, 1422, 2816, 3154, 3155, 3485
AsuC2I CCSGG 3 cut(s) 177, 1502, 3657
AvaII GGWCC 5 cut(s) 74, 179, 497, 1422, 2816
BaeGI GKGCMC 2 cut(s) 2005, 3158
BaeI ACNNNNGTAYC 6 cut(s) 2706, 2739, 3666, 3699, 4289, 4322
BalI TGGCCA 1 cut(s) 9
BanI GGYRCC 6 cut(s) 115, 1036, 1460, 1926, 2028, 2714
BanII GRGCYC 4 cut(s) 560, 1376, 2222, 3158
BarI GAAGNNNNNNTAC 2 cut(s) 4176, 4208
BauI CACGAG 1 cut(s) 2934
BbsI GAAGAC 4 cut(s) 536, 732, 1833, 3434
Bbv12I GWGCWC 4 cut(s) 946, 1528, 2005, 2222
BbvCI CCTCAGC 1 cut(s) 1158
BceAI ACGGC 5 cut(s) 13, 1704, 3031, 4012, 4186
BciT130I CCWGG 6 cut(s) 38, 974, 1417, 3159, 3423, 3474
BciVI GTATCC 2 cut(s) 1432, 1733
BclI TGATCA 3 cut(s) 1126, 3853, 4099
BcnI CCSGG 3 cut(s) 177, 1502, 3657
BfmI CTRYAG 7 cut(s) 150, 966, 1149, 2400, 2790, 3447, 4080
BfoI RGCGCY 2 cut(s) 1930, 2032
BfuAI ACCTGC 5 cut(s) 67, 584, 1857, 1880, 3259
BfuI GTATCC 2 cut(s) 1432, 1733
BglI GCCNNNNNGGC 1 cut(s) 4207
Bme1390I CCNGG 9 cut(s) 38, 177, 974, 1417, 1502, 3159, 3423, 3474, 3657
Bme18I GGWCC 5 cut(s) 74, 179, 497, 1422, 2816
BmgBI CACGTC 1 cut(s) 2552
BmgT120I GGNCC 8 cut(s) 74, 179, 497, 1422, 2816, 3154, 3155, 3485
BmrFI CCNGG 9 cut(s) 38, 177, 974, 1417, 1502, 3159, 3423, 3474, 3657
BmrI ACTGGG 3 cut(s) 1827, 2631, 3686
BmuI ACTGGG 3 cut(s) 1827, 2631, 3686
BoxI GACNNNNGTC 2 cut(s) 3522, 4247
BpiI GAAGAC 4 cut(s) 536, 732, 1833, 3434
BplI GAGNNNNNCTC 6 cut(s) 1510, 1542, 1783, 1815, 1855, 1887
BpmI CTGGAG 5 cut(s) 507, 3339, 3489, 4134, 4296
Bpu10I CCTNAGC 2 cut(s) 663, 1158
BpuEI CTTGAG 2 cut(s) 3213, 3519
BpuMI CCSGG 3 cut(s) 177, 1502, 3657
BsaBI GATNNNNATC 1 cut(s) 3207
BsaHI GRCGYC 2 cut(s) 1927, 2029
BsaI GGTCTC 3 cut(s) 1353, 1770, 1875
BsaWI WCCGGW 2 cut(s) 1463, 1725
BsaXI ACNNNNNCTCC 6 cut(s) 1738, 1768, 1780, 1810, 3175, 3205
Bse118I RCCGGY 3 cut(s) 539, 1463, 1761
Bse1I ACTGG 7 cut(s) 1833, 2637, 2718, 2774, 3436, 3680, 3692
Bse8I GATNNNNATC 1 cut(s) 3207
BseAI TCCGGA 1 cut(s) 1725
BseBI CCWGG 6 cut(s) 38, 974, 1417, 3159, 3423, 3474
BseJI GATNNNNATC 1 cut(s) 3207
BseNI ACTGG 7 cut(s) 1833, 2637, 2718, 2774, 3436, 3680, 3692
BseSI GKGCMC 2 cut(s) 2005, 3158
BseYI CCCAGC 2 cut(s) 1343, 3719
BsgI GTGCAG 6 cut(s) 474, 1908, 2916, 3218, 3237, 4086
BshFI GGCC 8 cut(s) 9, 36, 539, 1496, 2764, 3010, 3156, 3486
BshNI GGYRCC 6 cut(s) 115, 1036, 1460, 1926, 2028, 2714
BshTI ACCGGT 1 cut(s) 1463
BsiHKAI GWGCWC 4 cut(s) 946, 1528, 2005, 2222
BslFI GGGAC 7 cut(s) 140, 994, 2538, 2762, 2802, 3478, 3674
BsmBI CGTCTC 3 cut(s) 787, 2436, 4344
BsmFI GGGAC 7 cut(s) 140, 994, 2538, 2762, 2802, 3478, 3674
BsmI GAATGC 2 cut(s) 1946, 3655
BsnI GGCC 8 cut(s) 9, 36, 539, 1496, 2764, 3010, 3156, 3486
Bso31I GGTCTC 3 cut(s) 1353, 1770, 1875
Bsp120I GGGCCC 1 cut(s) 3154
Bsp1286I GDGCHC 7 cut(s) 560, 946, 1376, 1528, 2005, 2222, 3158
Bsp13I TCCGGA 1 cut(s) 1725
Bsp1407I TGTACA 1 cut(s) 3436
Bsp19I CCATGG 1 cut(s) 283
BspANI GGCC 8 cut(s) 9, 36, 539, 1496, 2764, 3010, 3156, 3486
BspEI TCCGGA 1 cut(s) 1725
BspHI TCATGA 2 cut(s) 865, 1489
BspMAI CTGCAG 4 cut(s) 154, 970, 1153, 2404
BspMI ACCTGC 5 cut(s) 67, 584, 1857, 1880, 3259
BspPI GGATC 7 cut(s) 1253, 1372, 2189, 3130, 3287, 3797, 4197
BspQI GCTCTTC 2 cut(s) 4115, 4280
BspT107I GGYRCC 6 cut(s) 115, 1036, 1460, 1926, 2028, 2714
BspTNI GGTCTC 3 cut(s) 1353, 1770, 1875
BsrFI RCCGGY 3 cut(s) 539, 1463, 1761
BsrGI TGTACA 1 cut(s) 3436
BsrI ACTGG 7 cut(s) 1833, 2637, 2718, 2774, 3436, 3680, 3692
BssAI RCCGGY 3 cut(s) 539, 1463, 1761
BssNI GRCGYC 2 cut(s) 1927, 2029
BssSI CACGAG 1 cut(s) 2934
BssT1I CCWWGG 4 cut(s) 283, 1434, 2864, 2975
Bst2BI CACGAG 1 cut(s) 2934
Bst2UI CCWGG 6 cut(s) 38, 974, 1417, 3159, 3423, 3474
Bst4CI ACNGT 9 cut(s) 200, 1208, 1646, 1826, 2000, 2595, 2607, 2901, 4261
Bst6I CTCTTC 8 cut(s) 760, 790, 1804, 2088, 2637, 3930, 4115, 4280
BstACI GRCGYC 2 cut(s) 1927, 2029
BstAPI GCANNNNNTGC 4 cut(s) 304, 2528, 2927, 2939
BstAUI TGTACA 1 cut(s) 3436
BstC8I GCNNGC 5 cut(s) 141, 695, 800, 804, 1887
BstDSI CCRYGG 2 cut(s) 283, 1972
BstENI CCTNNNNNAGG 2 cut(s) 165, 1598
BstH2I RGCGCY 2 cut(s) 1930, 2032
BstHHI GCGC 3 cut(s) 28, 1929, 2031
BstNI CCWGG 6 cut(s) 38, 974, 1417, 3159, 3423, 3474
BstNSI RCATGY 5 cut(s) 314, 400, 2522, 3191, 3670
BstPAI GACNNNNGTC 2 cut(s) 3522, 4247
BstSCI CCNGG 9 cut(s) 36, 175, 972, 1415, 1500, 3157, 3421, 3472, 3655
BstSFI CTRYAG 7 cut(s) 150, 966, 1149, 2400, 2790, 3447, 4080
BstSLI GKGCMC 2 cut(s) 2005, 3158
BstV2I GAAGAC 4 cut(s) 536, 732, 1833, 3434
BstX2I RGATCY 2 cut(s) 1364, 4189
BstXI CCANNNNNNTGG 1 cut(s) 2018
BstYI RGATCY 2 cut(s) 1364, 4189
BsuI GTATCC 2 cut(s) 1432, 1733
BsuRI GGCC 8 cut(s) 9, 36, 539, 1496, 2764, 3010, 3156, 3486
BtgI CCRYGG 2 cut(s) 283, 1972
BtrI CACGTC 1 cut(s) 2552
BtsI GCAGTG 2 cut(s) 119, 3721
BtsIMutI CAGTG 7 cut(s) 119, 238, 1638, 2556, 2725, 3721, 3913
BveI ACCTGC 5 cut(s) 67, 584, 1857, 1880, 3259
Cac8I GCNNGC 5 cut(s) 141, 695, 800, 804, 1887
CaiI CAGNNNCTG 2 cut(s) 1157, 2927
CciI TCATGA 2 cut(s) 865, 1489
CfoI GCGC 3 cut(s) 28, 1929, 2031
Cfr10I RCCGGY 3 cut(s) 539, 1463, 1761
Cfr13I GGNCC 8 cut(s) 74, 179, 497, 1422, 2816, 3154, 3155, 3485
Csp6I GTAC 5 cut(s) 1461, 1467, 2715, 3070, 3437
CspAI ACCGGT 1 cut(s) 1463
CviQI GTAC 5 cut(s) 1461, 1467, 2715, 3070, 3437
DinI GGCGCC 2 cut(s) 1928, 2030
DraI TTTAAA 2 cut(s) 2916, 3330
DraIII CACNNNGTG 2 cut(s) 2939, 3659
EaeI YGGCCR 2 cut(s) 7, 34
Eam1104I CTCTTC 8 cut(s) 760, 790, 1804, 2088, 2637, 3930, 4115, 4280
EarI CTCTTC 8 cut(s) 760, 790, 1804, 2088, 2637, 3930, 4115, 4280
EciI GGCGGA 1 cut(s) 66
Ecl136II GAGCTC 1 cut(s) 2220
Eco130I CCWWGG 4 cut(s) 283, 1434, 2864, 2975
Eco147I AGGCCT 2 cut(s) 1496, 3010
Eco24I GRGCYC 4 cut(s) 560, 1376, 2222, 3158
Eco31I GGTCTC 3 cut(s) 1353, 1770, 1875
Eco32I GATATC 1 cut(s) 835
Eco47I GGWCC 5 cut(s) 74, 179, 497, 1422, 2816
Eco53kI GAGCTC 1 cut(s) 2220
Eco57I CTGAAG 7 cut(s) 77, 300, 771, 1086, 2396, 2971, 4217
EcoICRI GAGCTC 1 cut(s) 2220
EcoNI CCTNNNNNAGG 2 cut(s) 165, 1598
EcoO109I RGGNCCY 4 cut(s) 179, 2816, 3154, 3155
EcoRI GAATTC 1 cut(s) 3561
EcoRII CCWGG 6 cut(s) 36, 972, 1415, 3157, 3421, 3472
EcoRV GATATC 1 cut(s) 835
EcoT14I CCWWGG 4 cut(s) 283, 1434, 2864, 2975
EcoT22I ATGCAT 1 cut(s) 1382
EcoT38I GRGCYC 4 cut(s) 560, 1376, 2222, 3158
EgeI GGCGCC 2 cut(s) 1928, 2030
EheI GGCGCC 2 cut(s) 1928, 2030
ErhI CCWWGG 4 cut(s) 283, 1434, 2864, 2975
Esp3I CGTCTC 3 cut(s) 787, 2436, 4344
FalI AAGNNNNNCTT 2 cut(s) 3038, 3070
FaqI GGGAC 7 cut(s) 140, 994, 2538, 2762, 2802, 3478, 3674
FauI CCCGC 1 cut(s) 226
FauNDI CATATG 1 cut(s) 3165
FbaI TGATCA 3 cut(s) 1126, 3853, 4099
FblI GTMKAC 1 cut(s) 464
FriOI GRGCYC 4 cut(s) 560, 1376, 2222, 3158
GlaI GCGC 3 cut(s) 27, 1928, 2030
GsaI CCCAGC 2 cut(s) 1347, 3723
GsuI CTGGAG 5 cut(s) 507, 3339, 3489, 4134, 4296
HaeII RGCGCY 2 cut(s) 1930, 2032
HaeIII GGCC 8 cut(s) 9, 36, 539, 1496, 2764, 3010, 3156, 3486
HhaI GCGC 3 cut(s) 28, 1929, 2031
Hin1I GRCGYC 2 cut(s) 1927, 2029
Hin6I GCGC 3 cut(s) 26, 1927, 2029
HinP1I GCGC 3 cut(s) 26, 1927, 2029
HincII GTYRAC 3 cut(s) 465, 1204, 3273
HindII GTYRAC 3 cut(s) 465, 1204, 3273
HindIII AAGCTT 4 cut(s) 513, 1068, 4233, 4358
HpaI GTTAAC 2 cut(s) 1204, 3273
Hpy166II GTNNAC 7 cut(s) 465, 953, 1204, 1661, 2003, 3273, 3437
Hpy8I GTNNAC 7 cut(s) 465, 953, 1204, 1661, 2003, 3273, 3437
Hpy99I CGWCG 1 cut(s) 466
HpyCH4III ACNGT 9 cut(s) 200, 1208, 1646, 1826, 2000, 2595, 2607, 2901, 4261
HpyCH4IV ACGT 4 cut(s) 303, 1663, 2158, 2551
HpySE526I ACGT 4 cut(s) 303, 1663, 2158, 2551
Hsp92I GRCGYC 2 cut(s) 1927, 2029
HspAI GCGC 3 cut(s) 26, 1927, 2029
KasI GGCGCC 2 cut(s) 1926, 2028
Kpn2I TCCGGA 1 cut(s) 1725
KpnI GGTACC 2 cut(s) 1464, 2718
Ksp22I TGATCA 3 cut(s) 1126, 3853, 4099
KspAI GTTAAC 2 cut(s) 1204, 3273
LguI GCTCTTC 2 cut(s) 4115, 4280
MaeII ACGT 4 cut(s) 303, 1663, 2158, 2551
MfeI CAATTG 1 cut(s) 1019
MflI RGATCY 2 cut(s) 1364, 4189
MhlI GDGCHC 7 cut(s) 560, 946, 1376, 1528, 2005, 2222, 3158
MlsI TGGCCA 1 cut(s) 9
MluNI TGGCCA 1 cut(s) 9
Mly113I GGCGCC 2 cut(s) 1927, 2029
MlyI GAGTC 9 cut(s) 361, 746, 1495, 1565, 1804, 2633, 3532, 4054, 4328
MmeI TCCRAC 4 cut(s) 124, 364, 621, 2253
Mox20I TGGCCA 1 cut(s) 9
Mph1103I ATGCAT 1 cut(s) 1382
MroI TCCGGA 1 cut(s) 1725
MroXI GAANNNNTTC 1 cut(s) 1825
MscI TGGCCA 1 cut(s) 9
MseI TTAA 9 cut(s) 1203, 1323, 1455, 1475, 1482, 2088, 2915, 3272, 3329
MslI CAYNNNNRTG 4 cut(s) 821, 936, 958, 1338
Msp20I TGGCCA 1 cut(s) 9
MspA1I CMGCKG 5 cut(s) 221, 1154, 2234, 2674, 4345
MspR9I CCNGG 9 cut(s) 38, 177, 974, 1417, 1502, 3159, 3423, 3474, 3657
MunI CAATTG 1 cut(s) 1019
Mva1269I GAATGC 2 cut(s) 1946, 3655
MvaI CCWGG 6 cut(s) 38, 974, 1417, 3159, 3423, 3474
NarI GGCGCC 2 cut(s) 1927, 2029
NciI CCSGG 3 cut(s) 177, 1502, 3657
NcoI CCATGG 1 cut(s) 283
NdeI CATATG 1 cut(s) 3165
NmeAIII GCCGAG 1 cut(s) 3771
NsiI ATGCAT 1 cut(s) 1382
NspI RCATGY 5 cut(s) 314, 400, 2522, 3191, 3670
PagI TCATGA 2 cut(s) 865, 1489
PaqCI CACCTGC 2 cut(s) 67, 1880
PasI CCCWGGG 1 cut(s) 973
PceI AGGCCT 2 cut(s) 1496, 3010
PciI ACATGT 2 cut(s) 396, 3666
PciSI GCTCTTC 2 cut(s) 4115, 4280
PctI GAATGC 2 cut(s) 1946, 3655
PdmI GAANNNNTTC 1 cut(s) 1825
PflFI GACNNNGTC 1 cut(s) 1579
PflMI CCANNNNNTGG 2 cut(s) 3380, 3698
PfoI TCCNGGA 1 cut(s) 1415
PinAI ACCGGT 1 cut(s) 1463
PleI GAGTC 9 cut(s) 361, 746, 1494, 1564, 1803, 2632, 3531, 4053, 4328
PluTI GGCGCC 2 cut(s) 1930, 2032
PpsI GAGTC 9 cut(s) 361, 746, 1494, 1564, 1803, 2632, 3531, 4053, 4328
PpuMI RGGWCCY 2 cut(s) 179, 2816
PscI ACATGT 2 cut(s) 396, 3666
PshAI GACNNNNGTC 2 cut(s) 3522, 4247
PshBI ATTAAT 1 cut(s) 1475
PsiI TTATAA 1 cut(s) 1668
Psp124BI GAGCTC 1 cut(s) 2222
Psp5II RGGWCCY 2 cut(s) 179, 2816
Psp6I CCWGG 6 cut(s) 36, 972, 1415, 3157, 3421, 3472
PspFI CCCAGC 2 cut(s) 1343, 3719
PspGI CCWGG 6 cut(s) 36, 972, 1415, 3157, 3421, 3472
PspOMI GGGCCC 1 cut(s) 3154
PspPI GGNCC 8 cut(s) 74, 179, 497, 1422, 2816, 3154, 3155, 3485
PspPPI RGGWCCY 2 cut(s) 179, 2816
PstI CTGCAG 4 cut(s) 154, 970, 1153, 2404
PstNI CAGNNNCTG 2 cut(s) 1157, 2927
PsuI RGATCY 2 cut(s) 1364, 4189
PsyI GACNNNGTC 1 cut(s) 1579
PvuII CAGCTG 2 cut(s) 2234, 2674
RsaI GTAC 5 cut(s) 1462, 1468, 2716, 3071, 3438
RsaNI GTAC 5 cut(s) 1461, 1467, 2715, 3070, 3437
RseI CAYNNNNRTG 4 cut(s) 821, 936, 958, 1338
SacI GAGCTC 1 cut(s) 2222
SalI GTCGAC 1 cut(s) 463
SapI GCTCTTC 2 cut(s) 4115, 4280
SaqAI TTAA 9 cut(s) 1203, 1323, 1455, 1475, 1482, 2088, 2915, 3272, 3329
Sau96I GGNCC 8 cut(s) 74, 179, 497, 1422, 2816, 3154, 3155, 3485
SchI GAGTC 9 cut(s) 361, 746, 1495, 1565, 1804, 2633, 3532, 4054, 4328
ScrFI CCNGG 9 cut(s) 38, 177, 974, 1417, 1502, 3159, 3423, 3474, 3657
SduI GDGCHC 7 cut(s) 560, 946, 1376, 1528, 2005, 2222, 3158
SfcI CTRYAG 7 cut(s) 150, 966, 1149, 2400, 2790, 3447, 4080
SfoI GGCGCC 2 cut(s) 1928, 2030
SinI GGWCC 5 cut(s) 74, 179, 497, 1422, 2816
SmiMI CAYNNNNRTG 4 cut(s) 821, 936, 958, 1338
SmlI CTYRAG 2 cut(s) 3228, 3534
SmoI CTYRAG 2 cut(s) 3228, 3534
SseBI AGGCCT 2 cut(s) 1496, 3010
SspDI GGCGCC 2 cut(s) 1926, 2028
SstI GAGCTC 1 cut(s) 2222
StuI AGGCCT 2 cut(s) 1496, 3010
StyD4I CCNGG 9 cut(s) 36, 175, 972, 1415, 1500, 3157, 3421, 3472, 3655
StyI CCWWGG 4 cut(s) 283, 1434, 2864, 2975
TaaI ACNGT 9 cut(s) 200, 1208, 1646, 1826, 2000, 2595, 2607, 2901, 4261
TaiI ACGT 4 cut(s) 306, 1666, 2161, 2554
TaqI TCGA 3 cut(s) 464, 2386, 2476
TaqII GACCGA 1 cut(s) 2276
TatI WGTACW 1 cut(s) 3436
TauI GCSGC 7 cut(s) 1157, 1704, 1710, 1752, 2881, 2884, 4213
Tru1I TTAA 9 cut(s) 1203, 1323, 1455, 1475, 1482, 2088, 2915, 3272, 3329
Tru9I TTAA 9 cut(s) 1203, 1323, 1455, 1475, 1482, 2088, 2915, 3272, 3329
TscAI CASTG 7 cut(s) 126, 238, 1645, 2563, 2725, 3721, 3913
TspGWI ACGGA 5 cut(s) 216, 276, 864, 1961, 2655
TspRI CASTG 7 cut(s) 126, 238, 1645, 2563, 2725, 3721, 3913
Tth111I GACNNNGTC 1 cut(s) 1579
Van91I CCANNNNNTGG 2 cut(s) 3380, 3698
VneI GTGCAC 1 cut(s) 2001
VpaK11BI GGWCC 5 cut(s) 74, 179, 497, 1422, 2816
VspI ATTAAT 1 cut(s) 1475
XagI CCTNNNNNAGG 2 cut(s) 165, 1598
XapI RAATTY 9 cut(s) 334, 1168, 1427, 2257, 3292, 3331, 3345, 3561, 3617
XbaI TCTAGA 4 cut(s) 1043, 2053, 2222, 3557
XceI RCATGY 5 cut(s) 314, 400, 2522, 3191, 3670
XcmI CCANNNNNNNNNTGG 3 cut(s) 17, 1340, 1432
XmiI GTMKAC 1 cut(s) 464
XmnI GAANNNNTTC 1 cut(s) 1825
Zsp2I ATGCAT 1 cut(s) 1382
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.