Rh7BG057600

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0009576
Physical Location & Seq
Reverse (-)
3831391 .. 3837030
5640 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG057600.1

Sequence Viewer

Length: 4404 bp
ATGTATGGCCAAGCTAATTATGGTGCGCCGTTTGGCCAGGGTCAGCCACCGATGCCACCTGCAAACCAACAGGGTCCGCCACCCCCGCCTCCACCTTCCCTTCAGTTCCAACAAGGCTCTCCAGCAGCAGCAGCACCGAATGTAGTTCAGCAGGCTATATCTGCTGTCCCACTTCAGATAGGTCAGCCGGGTCCTTATTTATATCAGCACGGTTCTGTTGCCCCACCTCCCGCTGCTCCGTTCAGTGGGATGCCAAATACAGGTCAATCTTACGGACACGCTAATCCAACAGTCCATGGAAGCACATGGCATAACGTGCAACATGCTTCAGCAACAGGAAACCAGAATTTCCAACCGATTTATCCACCAGCACTTGTGACTCCTCATGCTCCTCCTTACCCAAACATGTCACAGGCTGCAATACCACATGGAGCATTACCTCCTCCCCCTCCTCTCCCTTCGACTAATGCTACTTCTGGTTGTGCTGCACAAGGGCCAGCATCGTATAAAGCTTTGTCTCCAGCACAACCACAGGCCGGTCTTCAGCATGAGGGCTCCCATAATTTTGAAGGTGGAAGTGAGTGTGAAGCAGGTTCTCTAGCTAGAGATGGAGTATCATCAAATGGAAGTGTGATGTTGGATTTTTCTTCACCTCCACCTAAGCCATCAGATGACAAAGTTGATCATAAGATTGATTCTTTCTGCCAGCTTACTGCTATGAATGAAGGGAAAATTGAATCACCATTGAAGTCTTCATGTATTGACTCTTCATCTCAACCTGACCATTTTATTGTCTCTTCAGGTTGTAGCTTGCCTGCTGATTCTGACATGGAGATGGAAGATGATATCACCTTGTCTGACGGAGATCAGGAAGTTCATGATTCATCTAACGCTCTAAACCACAAGTCTGATGTCAGTCATGGGGAGCTTGATGTCAAAAAGCACCTACATGGAGCACAGAGTTCACTAGGATGGACTGCAGCCCAGGGTGTCTCATGTGAAAATGTGTCGTCCTCTTTGTCCCAATGCCAATTGATGATTGAAAAGGCTCCATCTAGAGTTGATATTTATTCAACTGAAGCTTCTGAATCCCTTTTGGCAAGTGAGCGAGATAAAACTTCTATTCCCATAGCTGATGATCAGAACACACTCGATGCTTCTGCAGCGGCTGAGGCAATAAATTCAGACGGGTTTTCTAACCAGATCACTGCAGTTAACAGTCCATTTAGACTTCTACAAGACTATACTTCTGAAAGCAGCTCAGAAAATGATCCTCATGCTTTCTTTGAAGATGCTAATGTTGTTATAGCTTCATCATCAGTTACAGCTAGTGTTAAAAGTAGCCATAAAGATGCTGGGTCTCAATTTGAGACAGGATCTAAGAGCCCATGCATGACTGATAAAATGTCTAGTCTGCAATATGAATCCAGGAGGTCCAAATTTTCCTTGGATACAAAAAAAGAGGTTAAGGGTACTGGTACAACATTAATCATTGAGAGTCATGAGGCCTTCCAGGGAAAAGAGGCGTTGAGTGGTGCTCCTATTGATATAGTTTCCAAAAGGGATGAGTCTCAGGAGGGGAAAAAGACCAAGTCTGAATCTGTTCTGCCGAAGGTGGATGAGTATGGGAGATTGGTCAGAGAAGGTTCCACTGACAGTAACTCTGATGGTTCACGTTATAATAAGAGGCGTAAAAGAGGCAGAAGCAGAAGCCGCAGCCGCAGTCGCAGCCGTATCCGGAGCCGGAGCCGGAGCCGCAGTTGTAGCCGGTCTCCTCTTGACAGCAGGAGGAGGAGGAGGAGTCCTCGGAGGAGAAGAGAGAAGCGAAACCGTTCTCCCAGTTGGTCTTCTAGGAATCATAGAAGCAGGAGCAGGTCTCCCACTTTTAGGCGTGCAGGTGATTTCAGAGATGAAAATAAGAGACAGGACAGGCGCCACATTCCAGAATGCTTTGACTTCCATAGAGGCAGATGCTTCCGTGGAGCATCCTGTCGGTATATGCACCGTGCACATGACCAAAGTGATGGTTCATGGCGCCATAGGAGCAACCAAAAGCATCTAGAAGTTCAGCCTAGTGTGAAGAACTCTAGGATTAAGGAAGAGATTGAAGATAGCTCTGACATGAATCCGCACGGTGAAATCAAAGGTCAAGAGATGCAACAATGTCAAGATGTGGCCGCAAAAGATGGTCAATTTATTGATCCTGATAAAAATGATTGTGAGAGCTCTAGAGTGACAGCTGCTACAATGCAACTGAAACAAAATTTTCAAGTAAAGTCGGAAGGAACCATCGGTCACAATCCTGAATCTCACCAGCCATCCCCTCAGATGTTGAGCTGTGCTGATAATATGAAGTCGTGGGGTGATACTTCTCAGGCTATTGAACAATCTCGAAGCAATAATTCTGCAGGACAGCTTCAGAAGGCTGATTTTTCGTCTCAGCAGATGGAAGCCTCTCTCATATCTGATTCACCACCAGATCGAGCATCCAAGATTTCTCCAAATAAGGTTTCTAGTATTGAACATGCAACAGATGCACTCTTATCAACTCATTCACGTCCCACTGAATGTTCTAATGCTCAACCACTTTCATCAGGACAGTTTTTATCACAGTATATGGCTCCTAAAGAGTCACCTCTTCCCAGTTTTTCTGCTGCAAATAGTCCATATCCGTCACAGCTGCCTCCTCCTCCTCCTCGTCCTTCACTATCACAAGGTACCAGTGTTGCTCATGTGCCACAGGTGCATAGGGACTACAACCAGAGGCCACCCTATCCAGTTCAGTCCATTCCTACAGGAATGATTCATTCTTATCAAGGTCCCTTACCCAACCAACCTGCCCAATTCTCGGTGTCACAAGATTCACCTTGGACATCCTTGCCGCCGCCACCTCCACGACCACCGTATGATTCATCTTTAAATGCAGGAACTGCTGCACGAGGTGCTTCTTCACAATTTCAGCAGAATAACTTGGCTCCAAGGAGTGACTTCAGTTCTCAGAGTTCTATGAGGCCTTACGGCTCTTACCCAACTGAATCCCCTCATTCTAAGGGTGACTTTCTGCATCAGATGTACCCTACATTGTCAGAGCTTCCTCATCCTATACCGAACAGGGAAGATTTCGGATCAGGCAATCCATCAAATCAACCTTTTGGGGGCCCTGGTCATATGAGAGAAGATCGCTTTACACACGCTCCTGTGCAGGATGTAAATCCTTCACATTCTTTTGCTCAGGGACACCTACACCCTCAACCTGCACCTTCTTCACAAGAGTTAACAAGGATCAAAATGCAAAATTTCTCTGGTGACAATTTTCCATCTGGAGAACTTTTAAATTCATCATCACAAATTCATCCTCATTCACATAACCAACAGCCAAGCTATGGTGTGCAATACTCTGTTGGTGATAGTATTTTGGGTGTGCCTGGGAAGACTGGTGTACAACACCCTGTAGGTGGAAGCATTTTGGGTTTGCCTGGGAAAGATGGCCCCATGTCCCGATACCCTCCAGATATGCTGGACAGGAGTCAGTTTTCTCAAGTTCCTGATTTTGGGGCATCTAGAATTCAAACACATCATAATCCTTACGCAGCTACTTTTGAGCAGCAGCCTCTAAGCTCCAAATTCAGTTCTAACATTCTCATTCAAGAAAAGAATGCACCCGGTGGTAACATGTTTGATACACCGGTCCAAGTCCCAGTTGATGGGCAAGGTGTTGGCAGTGCTGGGTCAAGACAGACAACTTCCTCGCCGAGTTCTGCTAGAGCTGGTGGTCAGCTTCTGCCCAAGTCAGATTGTGAGCAGTATGATCCACTTTTTGACAGCATTGAGCCATCAGGAAATCCACTCAATAAACATGATCACAGCCAAAAGCATATACCCACCAGTGATTCGAATATGATGGTGAGGCTCAGTGGTTCTTGTGAGCCATTAGATGTAGAAGAGAACAACAAACATACAGAGGTTCGCCCTGTTGCTTCGGCTACATCTCTGGATAATGACGGCTATGGTGAGACAGCAGATGCAGAAGTGGGTGTTGTTGAGGATGAGAGTCTTAGTAATGATGATGGTGCAGCAAACATGGCTGTAGGAGAGATGGAGATTGATCAGGTGAAATCTGGAGGGAAGAGCAAGAAGAAAAAGGATTCCAGATCAACGAGACTTTTCAAGAGTGCTGTTGCAGATTTTGTAAAGGATCTTCTGAAGCCGTCATGGCGGCAGGGTAATATGAGCAAAGAAGCTTTCAAGACCATTGTCAAAAAGACTGTTGATAAGGTTTCTGGAGCCATGAAAAGCCACCAGATACCCAAGTCCGAAGCAAAGATAAATCACTACATTGACTCGTCTCAGCGGAAACTGACAAAGCTTGTGATGGGTTATGTTGATAAGTATGTCAAGGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Surp

Protein Analysis

1467

Amino Acids

159.26

Weight (kDa)

6.86

Isoelectric Point (pI)

69.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SCAF11-like_C PF23030 1383 - 1451 3.8e-06 SCAF11-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1680
AarI CACCTGC 2 cut(s) 67, 1886
Acc36I ACCTGC 6 cut(s) 67, 581, 1863, 1886, 2845, 3262
Acc65I GGTACC 1 cut(s) 2717
AccB1I GGYRCC 3 cut(s) 1932, 2034, 2717
AccB7I CCANNNNNTGG 2 cut(s) 3383, 3704
AccIII TCCGGA 1 cut(s) 1737
AclWI GGATC 7 cut(s) 1265, 1384, 2195, 3133, 3290, 3803, 4203
AcoI YGGCCR 3 cut(s) 7, 34, 2175
AcsI RAATTY 9 cut(s) 346, 1180, 1439, 2263, 3295, 3334, 3348, 3564, 3623
AcuI CTGAAG 9 cut(s) 86, 158, 312, 527, 783, 1098, 2402, 2974, 4223
AcyI GRCGYC 2 cut(s) 1933, 2035
AdeI CACNNNGTG 2 cut(s) 2942, 3665
AfaI GTAC 5 cut(s) 1474, 1480, 2719, 3074, 3441
AflIII ACRYGT 2 cut(s) 405, 3672
AgeI ACCGGT 1 cut(s) 3685
AjiI CACGTC 1 cut(s) 2558
AjnI CCWGG 7 cut(s) 36, 984, 1427, 1512, 3160, 3424, 3475
AjuI GAANNNNNNNTTGG 2 cut(s) 2494, 2526
Alw21I GWGCWC 4 cut(s) 958, 1540, 2011, 2228
Alw44I GTGCAC 1 cut(s) 2007
AlwI GGATC 7 cut(s) 1265, 1384, 2195, 3133, 3290, 3803, 4203
AlwNI CAGNNNCTG 3 cut(s) 1169, 2930, 3781
Aor13HI TCCGGA 1 cut(s) 1737
ApaI GGGCCC 1 cut(s) 3161
ApaLI GTGCAC 1 cut(s) 2007
ApoI RAATTY 9 cut(s) 346, 1180, 1439, 2263, 3295, 3334, 3348, 3564, 3623
AseI ATTAAT 1 cut(s) 1487
AsiGI ACCGGT 1 cut(s) 3685
Asp700I GAANNNNTTC 2 cut(s) 1602, 1831
Asp718I GGTACC 1 cut(s) 2717
AspLEI GCGC 3 cut(s) 28, 1935, 2037
AspS9I GGNCC 9 cut(s) 74, 191, 494, 1434, 2819, 3157, 3158, 3488, 3688
AsuC2I CCSGG 2 cut(s) 189, 3663
AsuII TTCGAA 1 cut(s) 3893
AvaII GGWCC 5 cut(s) 74, 191, 1434, 2819, 3688
BaeGI GKGCMC 2 cut(s) 2011, 3161
BaeI ACNNNNGTAYC 6 cut(s) 2709, 2742, 3672, 3705, 4295, 4328
BalI TGGCCA 2 cut(s) 9, 36
BanI GGYRCC 3 cut(s) 1932, 2034, 2717
BanII GRGCYC 4 cut(s) 557, 1388, 2228, 3161
BarI GAAGNNNNNNTAC 4 cut(s) 751, 783, 4182, 4214
BauI CACGAG 1 cut(s) 2937
BbsI GAAGAC 4 cut(s) 533, 744, 1839, 3437
Bbv12I GWGCWC 4 cut(s) 958, 1540, 2011, 2228
BbvCI CCTCAGC 1 cut(s) 1170
BceAI ACGGC 5 cut(s) 13, 1716, 3034, 4018, 4192
BcgI CGANNNNNNTGC 2 cut(s) 1142, 1176
BciT130I CCWGG 7 cut(s) 38, 986, 1429, 1514, 3162, 3426, 3477
BciVI GTATCC 2 cut(s) 1444, 1745
BclI TGATCA 4 cut(s) 682, 1138, 3859, 4105
BcnI CCSGG 2 cut(s) 189, 3663
BfmI CTRYAG 7 cut(s) 978, 1161, 1209, 2406, 2793, 3450, 4086
BfoI RGCGCY 2 cut(s) 1936, 2038
BfuAI ACCTGC 6 cut(s) 67, 581, 1863, 1886, 2845, 3262
BfuI GTATCC 2 cut(s) 1444, 1745
BglI GCCNNNNNGGC 1 cut(s) 4213
Bme1390I CCNGG 9 cut(s) 38, 189, 986, 1429, 1514, 3162, 3426, 3477, 3663
Bme18I GGWCC 5 cut(s) 74, 191, 1434, 2819, 3688
BmgBI CACGTC 1 cut(s) 2558
BmgT120I GGNCC 9 cut(s) 74, 191, 494, 1434, 2819, 3157, 3158, 3488, 3688
BmrFI CCNGG 9 cut(s) 38, 189, 986, 1429, 1514, 3162, 3426, 3477, 3663
BmrI ACTGGG 3 cut(s) 1833, 2637, 3692
BmuI ACTGGG 3 cut(s) 1833, 2637, 3692
BoxI GACNNNNGTC 2 cut(s) 3525, 4253
BpiI GAAGAC 4 cut(s) 533, 744, 1839, 3437
BplI GAGNNNNNCTC 6 cut(s) 1522, 1554, 1789, 1821, 1861, 1893
BpmI CTGGAG 6 cut(s) 105, 504, 3342, 3492, 4140, 4302
Bpu10I CCTNAGC 3 cut(s) 660, 1170, 3231
Bpu14I TTCGAA 1 cut(s) 3893
BpuEI CTTGAG 1 cut(s) 3522
BpuMI CCSGG 2 cut(s) 189, 3663
BsaBI GATNNNNATC 1 cut(s) 3210
BsaHI GRCGYC 2 cut(s) 1933, 2035
BsaI GGTCTC 3 cut(s) 1365, 1776, 1881
BsaWI WCCGGW 2 cut(s) 1737, 3685
BsaXI ACNNNNNCTCC 6 cut(s) 1744, 1774, 1786, 1816, 3178, 3208
Bse118I RCCGGY 3 cut(s) 536, 1767, 3685
Bse1I ACTGG 8 cut(s) 1480, 1839, 2643, 2721, 2777, 3439, 3698, 3885
Bse8I GATNNNNATC 1 cut(s) 3210
BseAI TCCGGA 1 cut(s) 1737
BseBI CCWGG 7 cut(s) 38, 986, 1429, 1514, 3162, 3426, 3477
BseJI GATNNNNATC 1 cut(s) 3210
BseNI ACTGG 8 cut(s) 1480, 1839, 2643, 2721, 2777, 3439, 3698, 3885
BseSI GKGCMC 2 cut(s) 2011, 3161
BseYI CCCAGC 2 cut(s) 1355, 3725
BsgI GTGCAG 6 cut(s) 471, 1914, 2919, 3221, 3240, 4092
BshNI GGYRCC 3 cut(s) 1932, 2034, 2717
BshTI ACCGGT 1 cut(s) 3685
BsiHKAI GWGCWC 4 cut(s) 958, 1540, 2011, 2228
BsiSI CCGG 8 cut(s) 188, 537, 1738, 1744, 1750, 1768, 3663, 3686
BslFI GGGAC 8 cut(s) 152, 1006, 2544, 2765, 2805, 3249, 3481, 3680
BsmBI CGTCTC 2 cut(s) 2442, 4350
BsmFI GGGAC 8 cut(s) 152, 1006, 2544, 2765, 2805, 3249, 3481, 3680
BsmI GAATGC 2 cut(s) 1952, 3661
Bso31I GGTCTC 3 cut(s) 1365, 1776, 1881
Bsp119I TTCGAA 1 cut(s) 3893
Bsp120I GGGCCC 1 cut(s) 3157
Bsp1286I GDGCHC 7 cut(s) 557, 958, 1388, 1540, 2011, 2228, 3161
Bsp13I TCCGGA 1 cut(s) 1737
Bsp1407I TGTACA 1 cut(s) 3439
Bsp19I CCATGG 1 cut(s) 295
BspEI TCCGGA 1 cut(s) 1737
BspHI TCATGA 2 cut(s) 877, 1501
BspMAI CTGCAG 4 cut(s) 982, 1165, 1213, 2410
BspMI ACCTGC 6 cut(s) 67, 581, 1863, 1886, 2845, 3262
BspPI GGATC 7 cut(s) 1265, 1384, 2195, 3133, 3290, 3803, 4203
BspQI GCTCTTC 1 cut(s) 4121
BspT104I TTCGAA 1 cut(s) 3893
BspT107I GGYRCC 3 cut(s) 1932, 2034, 2717
BspTNI GGTCTC 3 cut(s) 1365, 1776, 1881
BsrFI RCCGGY 3 cut(s) 536, 1767, 3685
BsrGI TGTACA 1 cut(s) 3439
BsrI ACTGG 8 cut(s) 1480, 1839, 2643, 2721, 2777, 3439, 3698, 3885
BssAI RCCGGY 3 cut(s) 536, 1767, 3685
BssNI GRCGYC 2 cut(s) 1933, 2035
BssSI CACGAG 1 cut(s) 2937
BssT1I CCWWGG 4 cut(s) 295, 1446, 2867, 2978
Bst2BI CACGAG 1 cut(s) 2937
Bst2UI CCWGG 7 cut(s) 38, 986, 1429, 1514, 3162, 3426, 3477
Bst6I CTCTTC 7 cut(s) 772, 802, 1810, 2094, 2643, 3936, 4121
BstACI GRCGYC 2 cut(s) 1933, 2035
BstAPI GCANNNNNTGC 4 cut(s) 316, 2534, 2930, 2942
BstAUI TGTACA 1 cut(s) 3439
BstBI TTCGAA 1 cut(s) 3893
BstC8I GCNNGC 6 cut(s) 153, 498, 707, 812, 816, 1893
BstDSI CCRYGG 2 cut(s) 295, 1978
BstH2I RGCGCY 2 cut(s) 1936, 2038
BstHHI GCGC 3 cut(s) 28, 1935, 2037
BstNI CCWGG 7 cut(s) 38, 986, 1429, 1514, 3162, 3426, 3477
BstNSI RCATGY 4 cut(s) 326, 409, 2528, 3676
BstPAI GACNNNNGTC 2 cut(s) 3525, 4253
BstSCI CCNGG 9 cut(s) 36, 187, 984, 1427, 1512, 3160, 3424, 3475, 3661
BstSFI CTRYAG 7 cut(s) 978, 1161, 1209, 2406, 2793, 3450, 4086
BstSLI GKGCMC 2 cut(s) 2011, 3161
BstV2I GAAGAC 4 cut(s) 533, 744, 1839, 3437
BstX2I RGATCY 2 cut(s) 1376, 4195
BstXI CCANNNNNNTGG 1 cut(s) 2024
BstYI RGATCY 2 cut(s) 1376, 4195
BsuI GTATCC 2 cut(s) 1444, 1745
BtgI CCRYGG 2 cut(s) 295, 1978
BtrI CACGTC 1 cut(s) 2558
BtsI GCAGTG 2 cut(s) 1206, 3727
BtsIMutI CAGTG 8 cut(s) 250, 1206, 1650, 2562, 2728, 3727, 3892, 3919
BveI ACCTGC 6 cut(s) 67, 581, 1863, 1886, 2845, 3262
Cac8I GCNNGC 6 cut(s) 153, 498, 707, 812, 816, 1893
CaiI CAGNNNCTG 3 cut(s) 1169, 2930, 3781
CciI TCATGA 2 cut(s) 877, 1501
CfoI GCGC 3 cut(s) 28, 1935, 2037
Cfr10I RCCGGY 3 cut(s) 536, 1767, 3685
Cfr13I GGNCC 9 cut(s) 74, 191, 494, 1434, 2819, 3157, 3158, 3488, 3688
Csp6I GTAC 5 cut(s) 1473, 1479, 2718, 3073, 3440
CspAI ACCGGT 1 cut(s) 3685
CviQI GTAC 5 cut(s) 1473, 1479, 2718, 3073, 3440
DinI GGCGCC 2 cut(s) 1934, 2036
DraI TTTAAA 2 cut(s) 2919, 3333
DraIII CACNNNGTG 2 cut(s) 2942, 3665
EaeI YGGCCR 3 cut(s) 7, 34, 2175
Eam1104I CTCTTC 7 cut(s) 772, 802, 1810, 2094, 2643, 3936, 4121
EarI CTCTTC 7 cut(s) 772, 802, 1810, 2094, 2643, 3936, 4121
EciI GGCGGA 1 cut(s) 66
Ecl136II GAGCTC 1 cut(s) 2226
Eco130I CCWWGG 4 cut(s) 295, 1446, 2867, 2978
Eco147I AGGCCT 2 cut(s) 1508, 3013
Eco24I GRGCYC 4 cut(s) 557, 1388, 2228, 3161
Eco31I GGTCTC 3 cut(s) 1365, 1776, 1881
Eco32I GATATC 1 cut(s) 847
Eco47I GGWCC 5 cut(s) 74, 191, 1434, 2819, 3688
Eco53kI GAGCTC 1 cut(s) 2226
Eco57I CTGAAG 9 cut(s) 86, 158, 312, 527, 783, 1098, 2402, 2974, 4223
EcoICRI GAGCTC 1 cut(s) 2226
EcoO109I RGGNCCY 4 cut(s) 191, 2819, 3157, 3158
EcoRI GAATTC 1 cut(s) 3564
EcoRII CCWGG 7 cut(s) 36, 984, 1427, 1512, 3160, 3424, 3475
EcoRV GATATC 1 cut(s) 847
EcoT14I CCWWGG 4 cut(s) 295, 1446, 2867, 2978
EcoT22I ATGCAT 1 cut(s) 1394
EcoT38I GRGCYC 4 cut(s) 557, 1388, 2228, 3161
EgeI GGCGCC 2 cut(s) 1934, 2036
EheI GGCGCC 2 cut(s) 1934, 2036
ErhI CCWWGG 4 cut(s) 295, 1446, 2867, 2978
Esp3I CGTCTC 2 cut(s) 2442, 4350
FalI AAGNNNNNCTT 2 cut(s) 3041, 3073
FaqI GGGAC 8 cut(s) 152, 1006, 2544, 2765, 2805, 3249, 3481, 3680
FauI CCCGC 2 cut(s) 93, 238
FauNDI CATATG 1 cut(s) 3168
FbaI TGATCA 4 cut(s) 682, 1138, 3859, 4105
FriOI GRGCYC 4 cut(s) 557, 1388, 2228, 3161
GlaI GCGC 3 cut(s) 27, 1934, 2036
GsaI CCCAGC 2 cut(s) 1359, 3729
GsuI CTGGAG 6 cut(s) 105, 504, 3342, 3492, 4140, 4302
HaeII RGCGCY 2 cut(s) 1936, 2038
HapII CCGG 8 cut(s) 188, 537, 1738, 1744, 1750, 1768, 3663, 3686
HhaI GCGC 3 cut(s) 28, 1935, 2037
Hin1I GRCGYC 2 cut(s) 1933, 2035
Hin6I GCGC 3 cut(s) 26, 1933, 2035
HinP1I GCGC 3 cut(s) 26, 1933, 2035
HincII GTYRAC 2 cut(s) 1216, 3276
HindII GTYRAC 2 cut(s) 1216, 3276
HindIII AAGCTT 4 cut(s) 510, 1080, 4239, 4364
HpaI GTTAAC 2 cut(s) 1216, 3276
HpaII CCGG 8 cut(s) 188, 537, 1738, 1744, 1750, 1768, 3663, 3686
Hpy166II GTNNAC 6 cut(s) 965, 1216, 1673, 2009, 3276, 3440
Hpy8I GTNNAC 6 cut(s) 965, 1216, 1673, 2009, 3276, 3440
HpyCH4IV ACGT 3 cut(s) 315, 1675, 2557
HpySE526I ACGT 3 cut(s) 315, 1675, 2557
Hsp92I GRCGYC 2 cut(s) 1933, 2035
HspAI GCGC 3 cut(s) 26, 1933, 2035
KasI GGCGCC 2 cut(s) 1932, 2034
Kpn2I TCCGGA 1 cut(s) 1737
KpnI GGTACC 1 cut(s) 2721
Ksp22I TGATCA 4 cut(s) 682, 1138, 3859, 4105
KspAI GTTAAC 2 cut(s) 1216, 3276
LguI GCTCTTC 1 cut(s) 4121
MaeII ACGT 3 cut(s) 315, 1675, 2557
MfeI CAATTG 1 cut(s) 1031
MflI RGATCY 2 cut(s) 1376, 4195
MhlI GDGCHC 7 cut(s) 557, 958, 1388, 1540, 2011, 2228, 3161
MlsI TGGCCA 2 cut(s) 9, 36
MluNI TGGCCA 2 cut(s) 9, 36
Mly113I GGCGCC 2 cut(s) 1933, 2035
MlyI GAGTC 9 cut(s) 373, 758, 1507, 1577, 1810, 2639, 3535, 4060, 4334
MmeI TCCRAC 5 cut(s) 133, 311, 376, 618, 2259
Mox20I TGGCCA 2 cut(s) 9, 36
Mph1103I ATGCAT 1 cut(s) 1394
MroI TCCGGA 1 cut(s) 1737
MroXI GAANNNNTTC 2 cut(s) 1602, 1831
MscI TGGCCA 2 cut(s) 9, 36
MseI TTAA 8 cut(s) 1215, 1335, 1467, 1487, 2094, 2918, 3275, 3332
MslI CAYNNNNRTG 4 cut(s) 833, 948, 970, 1350
Msp20I TGGCCA 2 cut(s) 9, 36
MspA1I CMGCKG 5 cut(s) 233, 1166, 2240, 2680, 4351
MspI CCGG 8 cut(s) 188, 537, 1738, 1744, 1750, 1768, 3663, 3686
MspR9I CCNGG 9 cut(s) 38, 189, 986, 1429, 1514, 3162, 3426, 3477, 3663
MunI CAATTG 1 cut(s) 1031
Mva1269I GAATGC 2 cut(s) 1952, 3661
MvaI CCWGG 7 cut(s) 38, 986, 1429, 1514, 3162, 3426, 3477
NarI GGCGCC 2 cut(s) 1933, 2035
NciI CCSGG 2 cut(s) 189, 3663
NcoI CCATGG 1 cut(s) 295
NdeI CATATG 1 cut(s) 3168
NmeAIII GCCGAG 1 cut(s) 3777
NsiI ATGCAT 1 cut(s) 1394
NspI RCATGY 4 cut(s) 326, 409, 2528, 3676
NspV TTCGAA 1 cut(s) 3893
PagI TCATGA 2 cut(s) 877, 1501
PaqCI CACCTGC 2 cut(s) 67, 1886
PasI CCCWGGG 1 cut(s) 985
PceI AGGCCT 2 cut(s) 1508, 3013
PciI ACATGT 2 cut(s) 405, 3672
PciSI GCTCTTC 1 cut(s) 4121
PctI GAATGC 2 cut(s) 1952, 3661
PdmI GAANNNNTTC 2 cut(s) 1602, 1831
PflFI GACNNNGTC 1 cut(s) 1591
PflMI CCANNNNNTGG 2 cut(s) 3383, 3704
PfoI TCCNGGA 1 cut(s) 1427
PinAI ACCGGT 1 cut(s) 3685
PleI GAGTC 9 cut(s) 373, 758, 1506, 1576, 1809, 2638, 3534, 4059, 4334
PluTI GGCGCC 2 cut(s) 1936, 2038
PpsI GAGTC 9 cut(s) 373, 758, 1506, 1576, 1809, 2638, 3534, 4059, 4334
PpuMI RGGWCCY 2 cut(s) 191, 2819
PscI ACATGT 2 cut(s) 405, 3672
PshAI GACNNNNGTC 2 cut(s) 3525, 4253
PshBI ATTAAT 1 cut(s) 1487
PsiI TTATAA 1 cut(s) 1680
Psp124BI GAGCTC 1 cut(s) 2228
Psp5II RGGWCCY 2 cut(s) 191, 2819
Psp6I CCWGG 7 cut(s) 36, 984, 1427, 1512, 3160, 3424, 3475
PspFI CCCAGC 2 cut(s) 1355, 3725
PspGI CCWGG 7 cut(s) 36, 984, 1427, 1512, 3160, 3424, 3475
PspOMI GGGCCC 1 cut(s) 3157
PspPI GGNCC 9 cut(s) 74, 191, 494, 1434, 2819, 3157, 3158, 3488, 3688
PspPPI RGGWCCY 2 cut(s) 191, 2819
PstI CTGCAG 4 cut(s) 982, 1165, 1213, 2410
PstNI CAGNNNCTG 3 cut(s) 1169, 2930, 3781
PsuI RGATCY 2 cut(s) 1376, 4195
PsyI GACNNNGTC 1 cut(s) 1591
PvuII CAGCTG 2 cut(s) 2240, 2680
RsaI GTAC 5 cut(s) 1474, 1480, 2719, 3074, 3441
RsaNI GTAC 5 cut(s) 1473, 1479, 2718, 3073, 3440
RseI CAYNNNNRTG 4 cut(s) 833, 948, 970, 1350
SacI GAGCTC 1 cut(s) 2228
SapI GCTCTTC 1 cut(s) 4121
SaqAI TTAA 8 cut(s) 1215, 1335, 1467, 1487, 2094, 2918, 3275, 3332
Sau96I GGNCC 9 cut(s) 74, 191, 494, 1434, 2819, 3157, 3158, 3488, 3688
SchI GAGTC 9 cut(s) 373, 758, 1507, 1577, 1810, 2639, 3535, 4060, 4334
ScrFI CCNGG 9 cut(s) 38, 189, 986, 1429, 1514, 3162, 3426, 3477, 3663
SduI GDGCHC 7 cut(s) 557, 958, 1388, 1540, 2011, 2228, 3161
SfcI CTRYAG 7 cut(s) 978, 1161, 1209, 2406, 2793, 3450, 4086
SfoI GGCGCC 2 cut(s) 1934, 2036
SfuI TTCGAA 1 cut(s) 3893
SinI GGWCC 5 cut(s) 74, 191, 1434, 2819, 3688
SmiMI CAYNNNNRTG 4 cut(s) 833, 948, 970, 1350
SmlI CTYRAG 1 cut(s) 3537
SmoI CTYRAG 1 cut(s) 3537
SseBI AGGCCT 2 cut(s) 1508, 3013
SspDI GGCGCC 2 cut(s) 1932, 2034
SstI GAGCTC 1 cut(s) 2228
StuI AGGCCT 2 cut(s) 1508, 3013
StyD4I CCNGG 9 cut(s) 36, 187, 984, 1427, 1512, 3160, 3424, 3475, 3661
StyI CCWWGG 4 cut(s) 295, 1446, 2867, 2978
TaiI ACGT 3 cut(s) 318, 1678, 2560
TaqI TCGA 5 cut(s) 461, 1152, 2392, 2482, 3893
TaqII GACCGA 1 cut(s) 2282
TatI WGTACW 1 cut(s) 3439
TauI GCSGC 8 cut(s) 1169, 1716, 1722, 1758, 2180, 2884, 2887, 4219
Tru1I TTAA 8 cut(s) 1215, 1335, 1467, 1487, 2094, 2918, 3275, 3332
Tru9I TTAA 8 cut(s) 1215, 1335, 1467, 1487, 2094, 2918, 3275, 3332
TscAI CASTG 8 cut(s) 250, 1213, 1657, 2569, 2728, 3727, 3892, 3919
TspGWI ACGGA 5 cut(s) 228, 288, 876, 1967, 2661
TspRI CASTG 8 cut(s) 250, 1213, 1657, 2569, 2728, 3727, 3892, 3919
Tth111I GACNNNGTC 1 cut(s) 1591
Van91I CCANNNNNTGG 2 cut(s) 3383, 3704
VneI GTGCAC 1 cut(s) 2007
VpaK11BI GGWCC 5 cut(s) 74, 191, 1434, 2819, 3688
VspI ATTAAT 1 cut(s) 1487
XapI RAATTY 9 cut(s) 346, 1180, 1439, 2263, 3295, 3334, 3348, 3564, 3623
XbaI TCTAGA 4 cut(s) 1055, 2059, 2228, 3560
XceI RCATGY 4 cut(s) 326, 409, 2528, 3676
XcmI CCANNNNNNNNNTGG 3 cut(s) 17, 1352, 1444
XmnI GAANNNNTTC 2 cut(s) 1602, 1831
Zsp2I ATGCAT 1 cut(s) 1394
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.