Rh7CG059200

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0009576
Physical Location & Seq
Reverse (-)
4272420 .. 4278881
6462 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG059200.1

Sequence Viewer

Length: 3384 bp
ATGATTGAAAAGGCGCCATCTAGAGTTGATATTTATTCAACTGAAGCTTCTGAATCCCCTTTGGCAAGTGAGCGAGATAAAACTTCTATTCCCATAGCTGATGATCAGAACACACTTGATGCTTCTTCAGCGGCTGAGGCAATAAATTCAGACGGGTTTTCTAACCAGATCACTGCAGTTAACAGTCCATTTAGACTTCTACAAGACTATACTTCTGAAAACAGCTCAGAAAATGATCCTCATGCTTTCTTTGAAGATGCTAATGTTGTTATAGCTTCATCATCAGTTACAGCTAGTGTTAAAAGTAGCCATAAAGATGCTGGGTTGCAATTTGCGACAGGATCTAAGAGCCCGTGCATGACTGATAAAATGTCTAGTCTGCAATATGAATCCAGGAGGTCCAAATTTTCCTTGGATACAAAAAAAGAGGTTAAGGGTACCGGTACAACATTAATCATTAAGAGTCGTGAGGCCTTCCAGGGAAAAGAGGCGTTGAGTGGTGCTCCTATTGATATAGTTTCCAAAAGGGATGAGTCTCAGGAGGGGCAAAAGACCAAGTCTGAATCTGTTCTGCCAAAGGTGGATGAGTATGGGAGATTGGTCAGAGAAGGTTCCACTGACAGTAACTCTGATGGTTCACGTTATAATAAGAGGCGTAAAAGAGGCAGAAGCAGAAGCCGCAGCCGTATCCGGAGCCGGAGCCACAGCCGCAGCCGTATCCGGAGCCGCAGCCGCAGCCGCAGTTGTAGCCAGTCTCCTCTTGACAGCAGGAGGAGGAGGAGGAGTCCTCGGAGGAGAAGAGAGAAGCGAAAGCGTTCTCCCAGTTGGTCTTCTAGGAATCATAGAAGCAGGAGCAGGTCTCCCACTTTTAGGCGTGCAGGTGATTTCAGAGATGAAAATAAGAGACAGGACAGGCGCCACATTCCAGAATGCTTTGACTTCCTTAGAGGCAGATGCTTCCGTGGAGCATCCTGTCGGTATATGCACCGTGCACATGACCAAAGTGATGGTTCATGGCGCCATAGGAGCAACCAAAAGCATCTAGAAGTTCAGCCTAGTGTGAAGAACTCTAGGATTAAGGAAGAGATTGAAGATAGCTCTGACATGAATCCGCATGGTGAAATCAAAGGTCAAGAGATGCAACAATGTCAAGATATGGCTGCAAAAGATGGTCAATTTATTGATCCTGATAAAAATGATTGTGAGAGCTCTAGAGTGACAGCTGCTACAATGCAACTGAAACAAAATTTTCAAGTAAAGTCTGAAGGAACCATCGGTCACAATCCTGAATCTCACCAGCCATCCCCTCAGATGTTGAGCTATGCTGATAATATGAAGTCGTGGGGTGATACTTCTCAGGCTATTGAACAATCTCGAAGCAATAATTCTGCAGGACAGCTTCAGAAGGCTGGTTTTTCGTCTCAGCAGATGGAAGCCTCTCTCATATCTGATTCACCACCAGATCGAGCATCCAAGATTTCTCCAAATAAGGTTTCTAGTATTGAACATGCAACAGATGCACTCTTATCAACTCATTCACGTCCCACTGAATGTTCTAATACTCAACCACTTTCATCAGGACAGTTTTTATCACAGTATATGGCTCCTAAAGAGTCACCTCTTCCCAGTTTTTCTGCTGCAAATAGTCCATATCCGTCACAGCTGCCTCCTCCTCCTCCTCCTTCACTATCACAAGGTACCAGTGTTGCTCATGTGCCACAGGTGCATAGGGACTACAACCAGAGGCCACCCTATCCAGTTCAGTCCATTCCTACAGGAATGATTCATTCTTATCAAGGTCCCTTACCCAACCAACCTGCCCAATTCTCGGTGTCACAAGATTCACCTTGGACATCCTTGCCGCCGCCACCTCCACGACCACCGTATGATTCATCTTTAAATGCAGGAACTGCTGCACGAGGTGCTTCACAATTTCAGCAGAATAACTTGGCTCCAAGGAGTGACTTCAGTTCTCAGAGTTCTATGAGGCCTTACGGCTCTTACCCAACTGAATCCCCTCATTCTAAGGGTGACTTTCTGCATCAGATGTACCCTACATTGTCAGAGCTTCCTCATCCTCTACCGAACAGGGAAGATTTCGGATCAGGCAATCCATCAAATCAACCTTTTGGGGGCCCTGGTCATATGAGAGAAGATCGCTTTACACATGCTCCTGTGCAGGATGTAAATCCTTCACATTCTTTTGCTCAGGGACACCTACACCCTCAACCTGCACCTTCTTCACAGGAGTTAACAAGGATCAAAATGCAAAATTTCTGTGGTGACAATTTTCCATCTGGAGAACTTTTAAATTCATCATCACAAATTCATCCTCATTCACATAACCAACAGCCAAGCTATGGTGTGCAATACTCTGTTGGTGATAGTATTTTGGGTGTGCCTGGGAAGACTGGTGTACAACACCCTGTAGGTGGAAGCATTTTGGGTTTGCCTGGGAAAGATGGCCCCATGTCCCGATACCCTCCAGATATGCTGGACAGGAGTCAGTTTTCTCAAGTTCCTGATTTTGGGGCATCTAGAATTCAAACACATCACAATCCTTACGCAGCTACTTTTGAGCAGCCTCTAAGCTCCAAATTCAGTTCTAACATTCTCATTCAAGAAAAGAATGCACCCGGTGGCAACATGTTTGATACACCGGTCCAAGTCCCAGTTGATGGGCAAGGTGTTGGCAGTGCTGGGTCAAGACAGACAACTTCCTCGCCGAGTTCTGCTAGAGCTGGTGGTCAGCTTTTGCCCAAGTCAGACTGTGAGCAGTATGATCCACTTTTTGACAGCATTGAGCCATCAGGAAATCCACTCAATAAACATGATCACAGCCAAAAGCATATACCCACCAGTGATTCAAATATGATGGTGAGGCTCAGTGGTTCTTGTGAGCCATTAGATGTAGAAGAGAACAACAAACATACAGAGGTTCGCCCTGTTGCTTCGGCTACATCTCTGGATAATGACGGCTATGGTGAGACAGCAGATGCAGAAGTGGGTGTTGTTGAGGATGAGAGTCTTAGTAATGATGATGGTGCAGCAAACATGGCTGTAGGAGAGATGGAGATTGATCAGGTGAAATCTGGAGGGAAGAGCAAGAAGAAAAAGGATTCCAGATCGACGAGACTTTTCAAGAGTGCTGTTGCAGATTTTGTAAAGGATCTTCTGAAGCCGTCATGGCGGCAGGGTAATATGAGCAAAGAAGCTTTCAAGACCATTGTCAAAAAGACTGTTGATAAGGTTTCTGGAGCCATGAAGAGCCACCAGATACCCAAGTCCGAAGCAAAGATAAATCACTACATTGACTCATCGCAGCGGAAACTGACAAAGCTTGTGATGGTAACTACTTTTTTCTTACTCGTTTCTGCTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Surp

Protein Analysis

1127

Amino Acids

124.19

Weight (kDa)

9.07

Isoelectric Point (pI)

72.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SCAF11-like_C PF23030 1041 - 1109 2.3e-06 SCAF11-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 645
AarI CACCTGC 1 cut(s) 869
Acc36I ACCTGC 4 cut(s) 846, 869, 1825, 2239
Acc65I GGTACC 2 cut(s) 437, 1697
AccB1I GGYRCC 5 cut(s) 13, 437, 915, 1017, 1697
AccB7I CCANNNNNTGG 2 cut(s) 2360, 2678
AccIII TCCGGA 2 cut(s) 690, 720
AclWI GGATC 7 cut(s) 230, 349, 1178, 2110, 2267, 2777, 3177
AcsI RAATTY 8 cut(s) 145, 404, 1246, 2272, 2311, 2325, 2541, 2597
AcuI CTGAAG 6 cut(s) 63, 111, 1284, 1385, 1951, 3197
AcyI GRCGYC 3 cut(s) 14, 916, 1018
AdeI CACNNNGTG 2 cut(s) 1922, 2639
AfaI GTAC 5 cut(s) 439, 445, 1699, 2051, 2418
AfiI CCNNNNNNNGG 7 cut(s) 870, 1828, 2132, 2360, 2432, 2528, 2678
AflIII ACRYGT 1 cut(s) 2646
AgeI ACCGGT 2 cut(s) 440, 2659
AjiI CACGTC 1 cut(s) 1541
AjnI CCWGG 5 cut(s) 392, 477, 2137, 2401, 2452
AjuI GAANNNNNNNTTGG 2 cut(s) 1477, 1509
Alw21I GWGCWC 3 cut(s) 505, 994, 1211
Alw26I GTCTC 7 cut(s) 540, 759, 864, 898, 1425, 2981, 3127
Alw44I GTGCAC 1 cut(s) 990
AlwI GGATC 7 cut(s) 230, 349, 1178, 2110, 2267, 2777, 3177
AlwNI CAGNNNCTG 2 cut(s) 134, 1910
Aor13HI TCCGGA 2 cut(s) 690, 720
AoxI GGCC 5 cut(s) 471, 1745, 1988, 2134, 2464
ApaI GGGCCC 1 cut(s) 2138
ApaLI GTGCAC 1 cut(s) 990
ApoI RAATTY 8 cut(s) 145, 404, 1246, 2272, 2311, 2325, 2541, 2597
AseI ATTAAT 1 cut(s) 452
AsiGI ACCGGT 2 cut(s) 440, 2659
Asp700I GAANNNNTTC 2 cut(s) 567, 814
Asp718I GGTACC 2 cut(s) 437, 1697
AspLEI GCGC 3 cut(s) 16, 918, 1020
AspS9I GGNCC 6 cut(s) 399, 1799, 2134, 2135, 2465, 2662
AsuC2I CCSGG 1 cut(s) 2637
AvaII GGWCC 3 cut(s) 399, 1799, 2662
BaeGI GKGCMC 2 cut(s) 994, 2138
BaeI ACNNNNGTAYC 6 cut(s) 1689, 1722, 2646, 2679, 3269, 3302
BanI GGYRCC 5 cut(s) 13, 437, 915, 1017, 1697
BanII GRGCYC 3 cut(s) 353, 1211, 2138
BarI GAAGNNNNNNTAC 2 cut(s) 3156, 3188
BauI CACGAG 1 cut(s) 1917
BbsI GAAGAC 2 cut(s) 822, 2414
Bbv12I GWGCWC 3 cut(s) 505, 994, 1211
BbvCI CCTCAGC 1 cut(s) 135
BceAI ACGGC 5 cut(s) 669, 699, 2011, 2992, 3166
BciT130I CCWGG 5 cut(s) 394, 479, 2139, 2403, 2454
BciVI GTATCC 3 cut(s) 409, 698, 728
BclI TGATCA 3 cut(s) 103, 2833, 3079
BcnI CCSGG 1 cut(s) 2637
BcoDI GTCTC 7 cut(s) 540, 759, 864, 898, 1425, 2981, 3127
BfmI CTRYAG 5 cut(s) 174, 1389, 1773, 2427, 3060
BfoI RGCGCY 3 cut(s) 17, 919, 1021
BfuAI ACCTGC 4 cut(s) 846, 869, 1825, 2239
BfuI GTATCC 3 cut(s) 409, 698, 728
BglI GCCNNNNNGGC 1 cut(s) 3187
Bme1390I CCNGG 6 cut(s) 394, 479, 2139, 2403, 2454, 2637
Bme18I GGWCC 3 cut(s) 399, 1799, 2662
BmgBI CACGTC 1 cut(s) 1541
BmgT120I GGNCC 6 cut(s) 399, 1799, 2134, 2135, 2465, 2662
BmrFI CCNGG 6 cut(s) 394, 479, 2139, 2403, 2454, 2637
BmrI ACTGGG 3 cut(s) 816, 1620, 2666
BmuI ACTGGG 3 cut(s) 816, 1620, 2666
BoxI GACNNNNGTC 2 cut(s) 2502, 3227
BpiI GAAGAC 2 cut(s) 822, 2414
BplI GAGNNNNNCTC 6 cut(s) 487, 519, 772, 804, 844, 876
BpmI CTGGAG 4 cut(s) 2319, 2469, 3114, 3276
Bpu10I CCTNAGC 2 cut(s) 135, 2208
BpuEI CTTGAG 1 cut(s) 2499
BpuMI CCSGG 1 cut(s) 2637
BsaBI GATNNNNATC 1 cut(s) 2187
BsaHI GRCGYC 3 cut(s) 14, 916, 1018
BsaI GGTCTC 1 cut(s) 864
BsaJI CCNNGG 9 cut(s) 411, 478, 788, 961, 1847, 1955, 2137, 2402, 2453
BsaWI WCCGGW 4 cut(s) 440, 690, 720, 2659
BsaXI ACNNNNNCTCC 4 cut(s) 769, 799, 2155, 2185
Bsc4I CCNNNNNNNGG 7 cut(s) 870, 1828, 2132, 2360, 2432, 2528, 2678
Bse118I RCCGGY 2 cut(s) 440, 2659
Bse1I ACTGG 8 cut(s) 751, 822, 1626, 1701, 1757, 2416, 2672, 2859
Bse8I GATNNNNATC 1 cut(s) 2187
BseAI TCCGGA 2 cut(s) 690, 720
BseBI CCWGG 5 cut(s) 394, 479, 2139, 2403, 2454
BseDI CCNNGG 9 cut(s) 411, 478, 788, 961, 1847, 1955, 2137, 2402, 2453
BseJI GATNNNNATC 1 cut(s) 2187
BseLI CCNNNNNNNGG 7 cut(s) 870, 1828, 2132, 2360, 2432, 2528, 2678
BseMII CTCAG 9 cut(s) 126, 240, 551, 1322, 1370, 1436, 1988, 2222, 2899
BseNI ACTGG 8 cut(s) 751, 822, 1626, 1701, 1757, 2416, 2672, 2859
BseSI GKGCMC 2 cut(s) 994, 2138
BseYI CCCAGC 2 cut(s) 320, 2699
BsgI GTGCAG 5 cut(s) 897, 1899, 2198, 2217, 3066
BshFI GGCC 5 cut(s) 473, 1747, 1990, 2136, 2466
BshNI GGYRCC 5 cut(s) 13, 437, 915, 1017, 1697
BshTI ACCGGT 2 cut(s) 440, 2659
BsiHKAI GWGCWC 3 cut(s) 505, 994, 1211
BsiSI CCGG 6 cut(s) 441, 691, 697, 721, 2637, 2660
BslFI GGGAC 6 cut(s) 1527, 1745, 1785, 2226, 2458, 2654
BslI CCNNNNNNNGG 7 cut(s) 870, 1828, 2132, 2360, 2432, 2528, 2678
BsmAI GTCTC 7 cut(s) 540, 759, 864, 898, 1425, 2981, 3127
BsmBI CGTCTC 1 cut(s) 1425
BsmFI GGGAC 6 cut(s) 1527, 1745, 1785, 2226, 2458, 2654
BsmI GAATGC 2 cut(s) 935, 2635
BsnI GGCC 5 cut(s) 473, 1747, 1990, 2136, 2466
Bso31I GGTCTC 1 cut(s) 864
Bsp120I GGGCCC 1 cut(s) 2134
Bsp1286I GDGCHC 5 cut(s) 353, 505, 994, 1211, 2138
Bsp13I TCCGGA 2 cut(s) 690, 720
Bsp1407I TGTACA 1 cut(s) 2416
BspANI GGCC 5 cut(s) 473, 1747, 1990, 2136, 2466
BspCNI CTCAG 9 cut(s) 127, 239, 550, 1321, 1369, 1435, 1987, 2221, 2898
BspEI TCCGGA 2 cut(s) 690, 720
BspMAI CTGCAG 2 cut(s) 178, 1393
BspMI ACCTGC 4 cut(s) 846, 869, 1825, 2239
BspPI GGATC 7 cut(s) 230, 349, 1178, 2110, 2267, 2777, 3177
BspQI GCTCTTC 2 cut(s) 3095, 3260
BspT107I GGYRCC 5 cut(s) 13, 437, 915, 1017, 1697
BspTNI GGTCTC 1 cut(s) 864
BsrFI RCCGGY 2 cut(s) 440, 2659
BsrGI TGTACA 1 cut(s) 2416
BsrI ACTGG 8 cut(s) 751, 822, 1626, 1701, 1757, 2416, 2672, 2859
BssAI RCCGGY 2 cut(s) 440, 2659
BssECI CCNNGG 9 cut(s) 411, 478, 788, 961, 1847, 1955, 2137, 2402, 2453
BssNI GRCGYC 3 cut(s) 14, 916, 1018
BssSI CACGAG 1 cut(s) 1917
BssT1I CCWWGG 3 cut(s) 411, 1847, 1955
Bst2BI CACGAG 1 cut(s) 1917
Bst2UI CCWGG 5 cut(s) 394, 479, 2139, 2403, 2454
Bst4CI ACNGT 8 cut(s) 185, 623, 989, 1584, 1596, 1884, 2771, 3241
Bst6I CTCTTC 6 cut(s) 793, 1077, 1626, 2910, 3095, 3260
BstACI GRCGYC 3 cut(s) 14, 916, 1018
BstAPI GCANNNNNTGC 3 cut(s) 1517, 1910, 1922
BstAUI TGTACA 1 cut(s) 2416
BstC8I GCNNGC 1 cut(s) 876
BstDSI CCRYGG 1 cut(s) 961
BstH2I RGCGCY 3 cut(s) 17, 919, 1021
BstHHI GCGC 3 cut(s) 16, 918, 1020
BstMAI GTCTC 7 cut(s) 540, 759, 864, 898, 1425, 2981, 3127
BstNI CCWGG 5 cut(s) 394, 479, 2139, 2403, 2454
BstNSI RCATGY 3 cut(s) 1511, 2171, 2650
BstPAI GACNNNNGTC 2 cut(s) 2502, 3227
BstSCI CCNGG 6 cut(s) 392, 477, 2137, 2401, 2452, 2635
BstSFI CTRYAG 5 cut(s) 174, 1389, 1773, 2427, 3060
BstSLI GKGCMC 2 cut(s) 994, 2138
BstV2I GAAGAC 2 cut(s) 822, 2414
BstX2I RGATCY 2 cut(s) 341, 3169
BstXI CCANNNNNNTGG 1 cut(s) 1007
BstYI RGATCY 2 cut(s) 341, 3169
BsuI GTATCC 3 cut(s) 409, 698, 728
BsuRI GGCC 5 cut(s) 473, 1747, 1990, 2136, 2466
BtgI CCRYGG 1 cut(s) 961
BtgZI GCGATG 1 cut(s) 3303
BtrI CACGTC 1 cut(s) 1541
BtsI GCAGTG 2 cut(s) 171, 2701
BtsIMutI CAGTG 7 cut(s) 171, 615, 1545, 1708, 2701, 2866, 2893
BveI ACCTGC 4 cut(s) 846, 869, 1825, 2239
Cac8I GCNNGC 1 cut(s) 876
CaiI CAGNNNCTG 2 cut(s) 134, 1910
CfoI GCGC 3 cut(s) 16, 918, 1020
Cfr10I RCCGGY 2 cut(s) 440, 2659
Cfr13I GGNCC 6 cut(s) 399, 1799, 2134, 2135, 2465, 2662
Csp6I GTAC 5 cut(s) 438, 444, 1698, 2050, 2417
CspAI ACCGGT 2 cut(s) 440, 2659
CviQI GTAC 5 cut(s) 438, 444, 1698, 2050, 2417
DinI GGCGCC 3 cut(s) 15, 917, 1019
DraI TTTAAA 2 cut(s) 1899, 2310
DraIII CACNNNGTG 2 cut(s) 1922, 2639
Eam1104I CTCTTC 6 cut(s) 793, 1077, 1626, 2910, 3095, 3260
EarI CTCTTC 6 cut(s) 793, 1077, 1626, 2910, 3095, 3260
Ecl136II GAGCTC 1 cut(s) 1209
Eco130I CCWWGG 3 cut(s) 411, 1847, 1955
Eco147I AGGCCT 2 cut(s) 473, 1990
Eco24I GRGCYC 3 cut(s) 353, 1211, 2138
Eco31I GGTCTC 1 cut(s) 864
Eco47I GGWCC 3 cut(s) 399, 1799, 2662
Eco53kI GAGCTC 1 cut(s) 1209
Eco57I CTGAAG 6 cut(s) 63, 111, 1284, 1385, 1951, 3197
EcoICRI GAGCTC 1 cut(s) 1209
EcoO109I RGGNCCY 3 cut(s) 1799, 2134, 2135
EcoRI GAATTC 1 cut(s) 2541
EcoRII CCWGG 5 cut(s) 392, 477, 2137, 2401, 2452
EcoT14I CCWWGG 3 cut(s) 411, 1847, 1955
EcoT38I GRGCYC 3 cut(s) 353, 1211, 2138
EgeI GGCGCC 3 cut(s) 15, 917, 1019
EheI GGCGCC 3 cut(s) 15, 917, 1019
ErhI CCWWGG 3 cut(s) 411, 1847, 1955
Esp3I CGTCTC 1 cut(s) 1425
FalI AAGNNNNNCTT 2 cut(s) 2018, 2050
FaqI GGGAC 6 cut(s) 1527, 1745, 1785, 2226, 2458, 2654
FauNDI CATATG 1 cut(s) 2145
FbaI TGATCA 3 cut(s) 103, 2833, 3079
FriOI GRGCYC 3 cut(s) 353, 1211, 2138
GlaI GCGC 3 cut(s) 15, 917, 1019
GsaI CCCAGC 2 cut(s) 324, 2703
GsuI CTGGAG 4 cut(s) 2319, 2469, 3114, 3276
HaeII RGCGCY 3 cut(s) 17, 919, 1021
HaeIII GGCC 5 cut(s) 473, 1747, 1990, 2136, 2466
HapII CCGG 6 cut(s) 441, 691, 697, 721, 2637, 2660
HhaI GCGC 3 cut(s) 16, 918, 1020
Hin1I GRCGYC 3 cut(s) 14, 916, 1018
Hin6I GCGC 3 cut(s) 14, 916, 1018
HinP1I GCGC 3 cut(s) 14, 916, 1018
HincII GTYRAC 2 cut(s) 181, 2253
HindII GTYRAC 2 cut(s) 181, 2253
HindIII AAGCTT 3 cut(s) 45, 3213, 3338
HpaI GTTAAC 2 cut(s) 181, 2253
HpaII CCGG 6 cut(s) 441, 691, 697, 721, 2637, 2660
Hpy166II GTNNAC 5 cut(s) 181, 638, 992, 2253, 2417
Hpy8I GTNNAC 5 cut(s) 181, 638, 992, 2253, 2417
Hpy99I CGWCG 1 cut(s) 3133
HpyAV CCTTC 7 cut(s) 484, 602, 1259, 1399, 1692, 2202, 2247
HpyCH4III ACNGT 8 cut(s) 185, 623, 989, 1584, 1596, 1884, 2771, 3241
HpyCH4IV ACGT 2 cut(s) 640, 1540
HpySE526I ACGT 2 cut(s) 640, 1540
Hsp92I GRCGYC 3 cut(s) 14, 916, 1018
HspAI GCGC 3 cut(s) 14, 916, 1018
KasI GGCGCC 3 cut(s) 13, 915, 1017
Kpn2I TCCGGA 2 cut(s) 690, 720
KpnI GGTACC 2 cut(s) 441, 1701
Ksp22I TGATCA 3 cut(s) 103, 2833, 3079
KspAI GTTAAC 2 cut(s) 181, 2253
LguI GCTCTTC 2 cut(s) 3095, 3260
MaeII ACGT 2 cut(s) 640, 1540
MflI RGATCY 2 cut(s) 341, 3169
MhlI GDGCHC 5 cut(s) 353, 505, 994, 1211, 2138
Mly113I GGCGCC 3 cut(s) 14, 916, 1018
MlyI GAGTC 7 cut(s) 472, 542, 793, 1622, 2512, 3034, 3308
MroI TCCGGA 2 cut(s) 690, 720
MroXI GAANNNNTTC 2 cut(s) 567, 814
MseI TTAA 9 cut(s) 180, 300, 432, 452, 459, 1077, 1898, 2252, 2309
MslI CAYNNNNRTG 1 cut(s) 315
MspA1I CMGCKG 4 cut(s) 131, 1223, 1663, 3325
MspI CCGG 6 cut(s) 441, 691, 697, 721, 2637, 2660
MspR9I CCNGG 6 cut(s) 394, 479, 2139, 2403, 2454, 2637
Mva1269I GAATGC 2 cut(s) 935, 2635
MvaI CCWGG 5 cut(s) 394, 479, 2139, 2403, 2454
NarI GGCGCC 3 cut(s) 14, 916, 1018
NciI CCSGG 1 cut(s) 2637
NdeI CATATG 1 cut(s) 2145
NmeAIII GCCGAG 1 cut(s) 2751
NmuCI GTSAC 8 cut(s) 1216, 1277, 1614, 1656, 1833, 1961, 2030, 2282
NspI RCATGY 3 cut(s) 1511, 2171, 2650
PaqCI CACCTGC 1 cut(s) 869
PceI AGGCCT 2 cut(s) 473, 1990
PciI ACATGT 1 cut(s) 2646
PciSI GCTCTTC 2 cut(s) 3095, 3260
PctI GAATGC 2 cut(s) 935, 2635
PdmI GAANNNNTTC 2 cut(s) 567, 814
PflFI GACNNNGTC 1 cut(s) 556
PflMI CCANNNNNTGG 2 cut(s) 2360, 2678
PfoI TCCNGGA 1 cut(s) 392
PinAI ACCGGT 2 cut(s) 440, 2659
PleI GAGTC 7 cut(s) 471, 541, 792, 1621, 2511, 3033, 3308
PluTI GGCGCC 3 cut(s) 17, 919, 1021
PpsI GAGTC 7 cut(s) 471, 541, 792, 1621, 2511, 3033, 3308
PpuMI RGGWCCY 1 cut(s) 1799
PscI ACATGT 1 cut(s) 2646
PshAI GACNNNNGTC 2 cut(s) 2502, 3227
PshBI ATTAAT 1 cut(s) 452
PsiI TTATAA 1 cut(s) 645
Psp124BI GAGCTC 1 cut(s) 1211
Psp5II RGGWCCY 1 cut(s) 1799
Psp6I CCWGG 5 cut(s) 392, 477, 2137, 2401, 2452
PspFI CCCAGC 2 cut(s) 320, 2699
PspGI CCWGG 5 cut(s) 392, 477, 2137, 2401, 2452
PspOMI GGGCCC 1 cut(s) 2134
PspPI GGNCC 6 cut(s) 399, 1799, 2134, 2135, 2465, 2662
PspPPI RGGWCCY 1 cut(s) 1799
PstI CTGCAG 2 cut(s) 178, 1393
PstNI CAGNNNCTG 2 cut(s) 134, 1910
PsuI RGATCY 2 cut(s) 341, 3169
PsyI GACNNNGTC 1 cut(s) 556
PvuII CAGCTG 2 cut(s) 1223, 1663
RsaI GTAC 5 cut(s) 439, 445, 1699, 2051, 2418
RsaNI GTAC 5 cut(s) 438, 444, 1698, 2050, 2417
RseI CAYNNNNRTG 1 cut(s) 315
SacI GAGCTC 1 cut(s) 1211
SapI GCTCTTC 2 cut(s) 3095, 3260
SaqAI TTAA 9 cut(s) 180, 300, 432, 452, 459, 1077, 1898, 2252, 2309
Sau96I GGNCC 6 cut(s) 399, 1799, 2134, 2135, 2465, 2662
SchI GAGTC 7 cut(s) 472, 542, 793, 1622, 2512, 3034, 3308
ScrFI CCNGG 6 cut(s) 394, 479, 2139, 2403, 2454, 2637
SduI GDGCHC 5 cut(s) 353, 505, 994, 1211, 2138
SfcI CTRYAG 5 cut(s) 174, 1389, 1773, 2427, 3060
SfoI GGCGCC 3 cut(s) 15, 917, 1019
SinI GGWCC 3 cut(s) 399, 1799, 2662
SmiMI CAYNNNNRTG 1 cut(s) 315
SmlI CTYRAG 1 cut(s) 2514
SmoI CTYRAG 1 cut(s) 2514
SseBI AGGCCT 2 cut(s) 473, 1990
SspDI GGCGCC 3 cut(s) 13, 915, 1017
SstI GAGCTC 1 cut(s) 1211
StuI AGGCCT 2 cut(s) 473, 1990
StyD4I CCNGG 6 cut(s) 392, 477, 2137, 2401, 2452, 2635
StyI CCWWGG 3 cut(s) 411, 1847, 1955
TaaI ACNGT 8 cut(s) 185, 623, 989, 1584, 1596, 1884, 2771, 3241
TaiI ACGT 2 cut(s) 643, 1543
TaqI TCGA 3 cut(s) 1375, 1465, 3128
TaqII GACCGA 1 cut(s) 1265
TatI WGTACW 1 cut(s) 2416
TauI GCSGC 9 cut(s) 134, 681, 711, 729, 735, 741, 1864, 1867, 3193
Tru1I TTAA 9 cut(s) 180, 300, 432, 452, 459, 1077, 1898, 2252, 2309
Tru9I TTAA 9 cut(s) 180, 300, 432, 452, 459, 1077, 1898, 2252, 2309
TscAI CASTG 7 cut(s) 178, 622, 1552, 1708, 2701, 2866, 2893
TseFI GTSAC 8 cut(s) 1216, 1277, 1614, 1656, 1833, 1961, 2030, 2282
Tsp45I GTSAC 8 cut(s) 1216, 1277, 1614, 1656, 1833, 1961, 2030, 2282
TspGWI ACGGA 2 cut(s) 950, 1644
TspRI CASTG 7 cut(s) 178, 622, 1552, 1708, 2701, 2866, 2893
Tth111I GACNNNGTC 1 cut(s) 556
Van91I CCANNNNNTGG 2 cut(s) 2360, 2678
VneI GTGCAC 1 cut(s) 990
VpaK11BI GGWCC 3 cut(s) 399, 1799, 2662
VspI ATTAAT 1 cut(s) 452
XapI RAATTY 8 cut(s) 145, 404, 1246, 2272, 2311, 2325, 2541, 2597
XbaI TCTAGA 4 cut(s) 20, 1042, 1211, 2537
XceI RCATGY 3 cut(s) 1511, 2171, 2650
XcmI CCANNNNNNNNNTGG 2 cut(s) 317, 409
XmnI GAANNNNTTC 2 cut(s) 567, 814
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.