Rh7AG145700

RING-H2 finger protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0009036
Physical Location & Seq
Reverse (-)
11695648 .. 11695938
291 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG145700.1

Sequence Viewer

Length: 291 bp
ATGACGTTCCACCAGTACGTATCTTGCCTTGGCGATAACGTCAGCTACATGGTCATTGCTGTGCCAACAAGTCAAATGCCGCCGGACGACTACCGAAGCTCTGTGATTTCAACAGCTTTGGCTCCGAGGGATCTTGACTGGGGTGTTCAGTTGGCTTGGGATAAGCCTGACTGTGGTTTTTGTGAGCGCAATGGTCTTTTTTGTGGATCAGATCCTGCCAAAAGTTCCAAGATTCGATTCGGTGCATCCCTTTTTCTACGAAAACCGGTATGTCACTATGATATATTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind zf-RING_2

Protein Analysis

96

Amino Acids

10.74

Weight (kDa)

6.01

Isoelectric Point (pI)

48.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 80
AclWI GGATC 3 cut(s) 138, 206, 214
AfaI GTAC 1 cut(s) 17
AfiI CCNNNNNNNGG 1 cut(s) 173
AgeI ACCGGT 1 cut(s) 265
AgsI TTSAA 1 cut(s) 111
AjuI GAANNNNNNNTTGG 2 cut(s) 221, 253
AluBI AGCT 3 cut(s) 45, 99, 116
AluI AGCT 3 cut(s) 45, 99, 116
AlwI GGATC 3 cut(s) 138, 206, 214
AlwNI CAGNNNCTG 1 cut(s) 215
AsiGI ACCGGT 1 cut(s) 265
AspLEI GCGC 1 cut(s) 189
BisI GCNGC 1 cut(s) 80
BlsI GCNGC 1 cut(s) 81
BmiI GGNNCC 1 cut(s) 123
BmrI ACTGGG 1 cut(s) 148
BmsI GCATC 1 cut(s) 254
BmuI ACTGGG 1 cut(s) 148
BsaAI YACGTR 1 cut(s) 19
BsaJI CCNNGG 2 cut(s) 28, 125
BsaWI WCCGGW 1 cut(s) 265
Bsc4I CCNNNNNNNGG 1 cut(s) 173
Bse118I RCCGGY 1 cut(s) 265
Bse1I ACTGG 2 cut(s) 13, 143
Bse3DI GCAATG 2 cut(s) 54, 196
BseDI CCNNGG 2 cut(s) 28, 125
BseGI GGATG 1 cut(s) 245
BseLI CCNNNNNNNGG 1 cut(s) 173
BseMI GCAATG 2 cut(s) 54, 196
BseNI ACTGG 2 cut(s) 13, 143
BshTI ACCGGT 1 cut(s) 265
BsiSI CCGG 2 cut(s) 83, 266
BslI CCNNNNNNNGG 1 cut(s) 173
Bsp143I GATC 3 cut(s) 130, 206, 211
BspACI CCGC 1 cut(s) 80
BspLI GGNNCC 1 cut(s) 123
BspPI GGATC 3 cut(s) 138, 206, 214
BsrDI GCAATG 2 cut(s) 54, 196
BsrFI RCCGGY 1 cut(s) 265
BsrI ACTGG 2 cut(s) 13, 143
BssAI RCCGGY 1 cut(s) 265
BssECI CCNNGG 2 cut(s) 28, 125
BssMI GATC 3 cut(s) 130, 206, 211
BssT1I CCWWGG 1 cut(s) 28
Bst4CI ACNGT 1 cut(s) 173
BstBAI YACGTR 1 cut(s) 19
BstF5I GGATG 1 cut(s) 245
BstHHI GCGC 1 cut(s) 189
BstKTI GATC 3 cut(s) 133, 209, 214
BstMBI GATC 3 cut(s) 130, 206, 211
BstSNI TACGTA 1 cut(s) 19
BstX2I RGATCY 2 cut(s) 130, 211
BstYI RGATCY 2 cut(s) 130, 211
BtsCI GGATG 1 cut(s) 245
CaiI CAGNNNCTG 1 cut(s) 215
CfoI GCGC 1 cut(s) 189
Cfr10I RCCGGY 1 cut(s) 265
Csp6I GTAC 1 cut(s) 16
CspAI ACCGGT 1 cut(s) 265
CviAII CATG 1 cut(s) 49
CviJI RGCY 6 cut(s) 45, 99, 116, 122, 155, 166
CviKI_1 RGCY 6 cut(s) 45, 99, 116, 122, 155, 166
CviQI GTAC 1 cut(s) 16
DpnI GATC 3 cut(s) 132, 208, 213
DpnII GATC 3 cut(s) 130, 206, 211
Eco105I TACGTA 1 cut(s) 19
Eco130I CCWWGG 1 cut(s) 28
EcoT14I CCWWGG 1 cut(s) 28
ErhI CCWWGG 1 cut(s) 28
FaeI CATG 1 cut(s) 52
FaiI YATR 4 cut(s) 50, 271, 279, 284
FatI CATG 1 cut(s) 48
Fnu4HI GCNGC 1 cut(s) 80
FokI GGATG 1 cut(s) 232
Fsp4HI GCNGC 1 cut(s) 80
GlaI GCGC 1 cut(s) 188
GluI GCNGC 1 cut(s) 80
HapII CCGG 2 cut(s) 83, 266
HhaI GCGC 1 cut(s) 189
Hin1II CATG 1 cut(s) 52
Hin6I GCGC 1 cut(s) 187
HinP1I GCGC 1 cut(s) 187
HinfI GANTC 2 cut(s) 232, 237
HpaII CCGG 2 cut(s) 83, 266
Hpy188I TCNGA 2 cut(s) 126, 211
Hpy188III TCNNGA 1 cut(s) 134
HpyCH4III ACNGT 1 cut(s) 173
HpyCH4IV ACGT 3 cut(s) 5, 18, 39
HpyCH4V TGCA 1 cut(s) 245
HpySE526I ACGT 3 cut(s) 5, 18, 39
Hsp92II CATG 1 cut(s) 52
HspAI GCGC 1 cut(s) 187
Kzo9I GATC 3 cut(s) 130, 206, 211
LmnI GCTCC 1 cut(s) 127
LpnPI CCDG 6 cut(s) 26, 96, 124, 180, 228, 279
LweI GCATC 1 cut(s) 254
MaeII ACGT 3 cut(s) 5, 18, 39
MaeIII GTNAC 1 cut(s) 272
MalI GATC 3 cut(s) 132, 208, 213
MboI GATC 3 cut(s) 130, 206, 211
MflI RGATCY 2 cut(s) 130, 211
MnlI CCTC 1 cut(s) 120
MslI CAYNNNNRTG 1 cut(s) 59
MspI CCGG 2 cut(s) 83, 266
NdeII GATC 3 cut(s) 130, 206, 211
NlaIII CATG 1 cut(s) 52
NlaIV GGNNCC 1 cut(s) 123
NmuCI GTSAC 1 cut(s) 272
PfeI GAWTC 2 cut(s) 232, 237
PinAI ACCGGT 1 cut(s) 265
PkrI GCNGC 1 cut(s) 81
Ppu21I YACGTR 1 cut(s) 19
PspN4I GGNNCC 1 cut(s) 123
PstNI CAGNNNCTG 1 cut(s) 215
PsuI RGATCY 2 cut(s) 130, 211
RsaI GTAC 1 cut(s) 17
RsaNI GTAC 1 cut(s) 16
RseI CAYNNNNRTG 1 cut(s) 59
SatI GCNGC 1 cut(s) 80
Sau3AI GATC 3 cut(s) 130, 206, 211
SetI ASST 6 cut(s) 8, 21, 42, 47, 101, 118
SfaNI GCATC 1 cut(s) 254
SmiMI CAYNNNNRTG 1 cut(s) 59
SnaBI TACGTA 1 cut(s) 19
SsiI CCGC 1 cut(s) 80
StyI CCWWGG 1 cut(s) 28
TaaI ACNGT 1 cut(s) 173
TaiI ACGT 3 cut(s) 8, 21, 42
TaqI TCGA 1 cut(s) 235
TauI GCSGC 1 cut(s) 82
TfiI GAWTC 2 cut(s) 232, 237
TseFI GTSAC 1 cut(s) 272
Tsp45I GTSAC 1 cut(s) 272
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.