Rh7BG410700

XIAP-associated factor 1-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
46136681 .. 46140315
3635 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG410700.1

Sequence Viewer

Length: 474 bp
ATGGCTGTTGCATCTGATGAAGCTAACAGGATATGCAATCACTGTGAAAGAGCTATCCCGTCTTTAAATATTGATTTGCATTATGCTCACTGTGTCCGCAATCTGGAAAGATGTAAAGTTTGTGGTGACATGGTTCCGAAAAAACATGCTGAGGAACATTACTTTGACAACCATGCTCCGGTATCTTGTTCACTTTGTAGTGAGACAATGGAACGTGATATATTGGCAATCCACAAAGGTGAAAATTGTCCTCGAAGAATTGTCACATGCGAGTTCTGTGAGTTCCCATTGCCTGCTGTTGATCTAGCTGAGCATCAGGAAGTATGTGGCAATCGGACAGAACTTTGTCTTCATTGTAGAAGATACGTTAGACTTCGAGAAAGATATAACCATGAGATTAGTTGCAATAGTGTCTCAGAAAATACCGTGGGACCTTCCAGGTTAGTTCACTATCATTTTGCTTTCATATATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

157

Amino Acids

18.16

Weight (kDa)

6.29

Isoelectric Point (pI)

54.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012125)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 97
AfiI CCNNNNNNNGG 2 cut(s) 103, 178
AjnI CCWGG 1 cut(s) 437
AleI CACNNNNGTG 1 cut(s) 237
AluBI AGCT 3 cut(s) 23, 53, 308
AluI AGCT 3 cut(s) 23, 53, 308
Alw26I GTCTC 2 cut(s) 197, 418
AspS9I GGNCC 1 cut(s) 431
AsuHPI GGTGA 2 cut(s) 137, 251
AvaII GGWCC 1 cut(s) 431
BbsI GAAGAC 1 cut(s) 341
BbvCI CCTCAGC 1 cut(s) 150
BciT130I CCWGG 1 cut(s) 439
BcoDI GTCTC 2 cut(s) 197, 418
BfaI CTAG 1 cut(s) 305
BlpI GCTNAGC 1 cut(s) 309
Bme1390I CCNGG 1 cut(s) 439
Bme18I GGWCC 1 cut(s) 431
BmgT120I GGNCC 1 cut(s) 431
BmiI GGNNCC 2 cut(s) 135, 432
BmrFI CCNGG 1 cut(s) 439
BmsI GCATC 2 cut(s) 20, 322
BpiI GAAGAC 1 cut(s) 341
Bpu10I CCTNAGC 1 cut(s) 150
Bpu1102I GCTNAGC 1 cut(s) 309
BsaJI CCNNGG 1 cut(s) 426
BsaWI WCCGGW 1 cut(s) 178
Bsc4I CCNNNNNNNGG 2 cut(s) 103, 178
Bse3DI GCAATG 1 cut(s) 287
BseBI CCWGG 1 cut(s) 439
BseDI CCNNGG 1 cut(s) 426
BseLI CCNNNNNNNGG 2 cut(s) 103, 178
BseMI GCAATG 1 cut(s) 287
BseMII CTCAG 3 cut(s) 141, 300, 429
BsiSI CCGG 1 cut(s) 179
BslFI GGGAC 1 cut(s) 444
BslI CCNNNNNNNGG 2 cut(s) 103, 178
BsmAI GTCTC 2 cut(s) 197, 418
BsmFI GGGAC 1 cut(s) 444
Bsp143I GATC 1 cut(s) 301
Bsp1720I GCTNAGC 1 cut(s) 309
BspACI CCGC 1 cut(s) 97
BspCNI CTCAG 3 cut(s) 142, 301, 428
BspLI GGNNCC 2 cut(s) 135, 432
BsrDI GCAATG 1 cut(s) 287
BssECI CCNNGG 1 cut(s) 426
BssMI GATC 1 cut(s) 301
Bst2UI CCWGG 1 cut(s) 439
Bst4CI ACNGT 3 cut(s) 44, 92, 427
BstC8I GCNNGC 1 cut(s) 294
BstDEI CTNAG 3 cut(s) 150, 309, 415
BstDSI CCRYGG 1 cut(s) 426
BstKTI GATC 1 cut(s) 304
BstMAI GTCTC 2 cut(s) 197, 418
BstMBI GATC 1 cut(s) 301
BstNI CCWGG 1 cut(s) 439
BstNSI RCATGY 2 cut(s) 149, 270
BstSCI CCNGG 1 cut(s) 437
BstV2I GAAGAC 1 cut(s) 341
BtgI CCRYGG 1 cut(s) 426
BtsIMutI CAGTG 2 cut(s) 40, 88
Cac8I GCNNGC 1 cut(s) 294
Cfr13I GGNCC 1 cut(s) 431
CviAII CATG 5 cut(s) 130, 146, 173, 267, 392
CviJI RGCY 4 cut(s) 5, 23, 53, 308
CviKI_1 RGCY 4 cut(s) 5, 23, 53, 308
DdeI CTNAG 3 cut(s) 150, 309, 415
DpnI GATC 1 cut(s) 303
DpnII GATC 1 cut(s) 301
DraI TTTAAA 1 cut(s) 66
Eco47I GGWCC 1 cut(s) 431
EcoO109I RGGNCCY 1 cut(s) 431
EcoRII CCWGG 1 cut(s) 437
FaeI CATG 5 cut(s) 133, 149, 176, 270, 395
FaqI GGGAC 1 cut(s) 444
FatI CATG 5 cut(s) 129, 145, 172, 266, 391
FspBI CTAG 1 cut(s) 305
HapII CCGG 1 cut(s) 179
Hin1II CATG 5 cut(s) 133, 149, 176, 270, 395
HpaII CCGG 1 cut(s) 179
HphI GGTGA 2 cut(s) 137, 251
Hpy166II GTNNAC 2 cut(s) 191, 448
Hpy188I TCNGA 4 cut(s) 16, 138, 336, 418
Hpy188III TCNNGA 3 cut(s) 104, 317, 377
Hpy8I GTNNAC 2 cut(s) 191, 448
HpyAV CCTTC 1 cut(s) 444
HpyCH4III ACNGT 3 cut(s) 44, 92, 427
HpyCH4IV ACGT 2 cut(s) 214, 366
HpyCH4V TGCA 4 cut(s) 11, 36, 79, 405
HpyF3I CTNAG 3 cut(s) 150, 309, 415
HpySE526I ACGT 2 cut(s) 214, 366
Hsp92II CATG 5 cut(s) 133, 149, 176, 270, 395
Kzo9I GATC 1 cut(s) 301
LmnI GCTCC 1 cut(s) 181
LpnPI CCDG 7 cut(s) 13, 89, 192, 302, 306, 424, 451
LweI GCATC 2 cut(s) 20, 322
MaeI CTAG 1 cut(s) 305
MaeII ACGT 2 cut(s) 214, 366
MaeIII GTNAC 2 cut(s) 125, 262
MalI GATC 1 cut(s) 303
MboI GATC 1 cut(s) 301
MboII GAAGA 3 cut(s) 267, 341, 372
MluCI AATT 2 cut(s) 244, 258
MnlI CCTC 2 cut(s) 145, 261
MseI TTAA 2 cut(s) 65, 472
MslI CAYNNNNRTG 1 cut(s) 237
MspI CCGG 1 cut(s) 179
MspR9I CCNGG 1 cut(s) 439
MvaI CCWGG 1 cut(s) 439
NdeII GATC 1 cut(s) 301
NlaIII CATG 5 cut(s) 133, 149, 176, 270, 395
NlaIV GGNNCC 2 cut(s) 135, 432
NmuCI GTSAC 2 cut(s) 125, 262
NspI RCATGY 2 cut(s) 149, 270
OliI CACNNNNGTG 1 cut(s) 237
PpuMI RGGWCCY 1 cut(s) 431
Psp5II RGGWCCY 1 cut(s) 431
Psp6I CCWGG 1 cut(s) 437
PspGI CCWGG 1 cut(s) 437
PspN4I GGNNCC 2 cut(s) 135, 432
PspPI GGNCC 1 cut(s) 431
PspPPI RGGWCCY 1 cut(s) 431
RseI CAYNNNNRTG 1 cut(s) 237
SaqAI TTAA 2 cut(s) 65, 472
Sau3AI GATC 1 cut(s) 301
Sau96I GGNCC 1 cut(s) 431
ScrFI CCNGG 1 cut(s) 439
SetI ASST 8 cut(s) 25, 55, 217, 241, 310, 369, 436, 443
SfaNI GCATC 2 cut(s) 20, 322
SinI GGWCC 1 cut(s) 431
SmiMI CAYNNNNRTG 1 cut(s) 237
Sse9I AATT 2 cut(s) 244, 258
SsiI CCGC 1 cut(s) 97
SspI AATATT 1 cut(s) 70
SspMI CTAG 1 cut(s) 305
StyD4I CCNGG 1 cut(s) 437
TaaI ACNGT 3 cut(s) 44, 92, 427
TaiI ACGT 2 cut(s) 217, 369
TaqI TCGA 2 cut(s) 253, 376
TasI AATT 2 cut(s) 244, 258
Tru1I TTAA 2 cut(s) 65, 472
Tru9I TTAA 2 cut(s) 65, 472
TscAI CASTG 2 cut(s) 47, 95
TseFI GTSAC 2 cut(s) 125, 262
Tsp45I GTSAC 2 cut(s) 125, 262
TspDTI ATGAA 3 cut(s) 33, 341, 454
TspRI CASTG 2 cut(s) 47, 95
VpaK11BI GGWCC 1 cut(s) 431
XceI RCATGY 2 cut(s) 149, 270
XspI CTAG 1 cut(s) 305
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.