Rh7CG136400

Cell division cycle protein 48 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0013824
Physical Location & Seq
Reverse (-)
11108939 .. 11113243
4305 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG136400.1

Sequence Viewer

Length: 1938 bp
ATGCGAAGTGTTGAGTTCAAGGTCATTGAGACAGACCCTGGTGAATACTGTGTTGTTGCTCCCGATACTGAGATTTTCTGTGAGGGAGAACCTGTGAAACGTGAGGATGAGGAAAAATTGAATGAGGTGGGCTATGATGATGTTGGAGGTGTTAGGAAGCAAATGGCTCAGATACGCGAGTTAGTAGAGTTACCTCTTAGACACCCACAGCTCTTCAAGTCCATTGGAGTGAAACCACCTAAAGGTATTCTGCTTTATGGACCGCCTGGGTCTGGGAAAACTTTGATTGCAAGAGCTGTAGCTAATGAGACTGGAGCATTCTTCTTTTTGATTAATGGGCCTGAAATAATGTCAAAGTTAGCTGGTGAGAGTGAAAGCAACTTGAGGAAGGCATTTGAAGAAGCTGAAAAGAATGCCCCATCAATCATTTTTATTGATGAGTTAGATTCCATTGCTCCAAAGAGGGAGAAGACTCAGGGTGAAGTGGAAAGGCGTATAGTATCGCAACTTCTGACTTTAATGGATGGTCTCAAGTCCCGTGCACATGTTATTGTCATGGGAGCTACAAATAGGCCAAACAGCATTGACCCTGCTCTGAGGAGGTTTGGAAGATTTGATAGAGAGATTGACATAGGTGTACCGGATGAAGTTGGAAGATTGGAAGTTTTGAGAATCCATACAAAGAACATGAAACTTGCAGAAGATGTTGATCTCGAACGAGTTTCAAAGGATACCCATGGTTATGTCGGTGCTGATCTTGCCGCTCTCTGTACTGAGGCTGCCCTTCAGTGCATCCGTGAGAAAATGGATGTTATTGACTTGGAAGATGAGGAAATTGATGCTGAGGTGTTGAATTCTATGGCTGTGACGAATGAACACTTCCAGACTGCATTGGGTGCTTCAAATCCTTCAGCATTGCGTGAAACTGTTGTGGAGGTACCTAATGTCTCATGGGACGCTATTGGTGGATTGGACAATGTCAAAAGAGAACTTCAAGAGACTGTTCAATACCCAGTGGAGCATCCTGAGAAGTTTGAGAAATTTGGCATGTCACCTTCTAAAGGTGTTCTCTTTTATGGGCCACCTGGCTGTGGTAAAACCCTTCTTGCTAAGGCAATTGCCAATGAATGCCAGGCGAATTTCATTAGCATCAAAGGCCCCGAGTTACTGACAATGTGGTTTGGAGAAAGTGAGGCAAACGTCCGTGAGATATTTGACAAGGCTCGCCAATCTGCTCCTTGTGTTCTTTTCTTTGATGAGCTGGACTCGATTGCAACTCAGCGTGGAAATTCTTCTGGAGATGCTGGTGGTGCTGCAGATAGAGTCTTGAACCAACTTCTAACTGAAATGGATGGAATGAGTGCAAAGAAAACAGTTTTTATCATTGGAGCAACAAACAGGCCAGACATTATTGACCCAGCATTGCTCAGGCCTGGACGTCTTGACCAGCTCATCTATATCCCACTCCCAGATGAAGCTTCCCGTCTTCAGATTTTCAAAGCATGTTTGCGGAAGTCACCCGTCTCTAAGGATGTTGACCTTGCAGTTCTTGCGCATCATACCCATGGTTTTAGCGGTGCTGATATCACTGAGATATGTCAGCGTGCCTGCAAATATGCCATCAGAGAAAATATTGAGAAGGATATTGAGAAGGAGAGAAGAAGGGCAGAGAACCCAGAAGCGATGGAGGAGGATGACATTGATGAGGTTCCCGAGATAAAGGCAGCACACTTCGAGGAATCCATGAAATTTGCCCGCCGAAGTGTTAGTGATGCTGACATCAGGAAGTACCAGGCATTCGCTCAGACTCTGCAGCAATCTCGTGGGCTTGGATCCGACTTCCGGTTCCCCCAAACGGGCACCACTGCAGGAGGAGCAGCTCCAGACCCTTTTGCTTCGGCCCCAGCTGCTGCAGATGACGATGATCTGTACAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko04141 ko05134 map04141 map05134
Pfam Domains
Protein Families
AAA CDC48_2 CDC48_N Vps4_C

Protein Analysis

645

Amino Acids

71.16

Weight (kDa)

4.89

Isoelectric Point (pI)

45.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA PF00004 83 - 212 9.7e-48 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 235 - 278 9.1e-16 AAA+ lid domain
AAA PF00004 356 - 489 7.7e-48 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 511 - 551 3.2e-13 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013824)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G09840 AT5G03340
fragaria_vesca FvH4_5g05770 FvH4_5g05770
malus_domestica MD06G1170300.v1.1 MD14G1175800.v1.1
pyrus_communis pycom06g15170 pycom14g14690
rosa_chinensis RchiOBHm_Chr7g0193051
rosa_laevigata RLG00000004299
rosa_multiflora Rmu_sc0028357.1_g000001
rosa_roxburghii Rroxscaffold_3G00262420
rosa_rugosa Rorug07G0007300
rosa_samantha Rh7AG132400 Rh7CG136400 Rh7DG134300
rosa_wichuraiana Rw7G011310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1441
Acc16I TGCGCA 1 cut(s) 1554
Acc65I GGTACC 1 cut(s) 937
AccB1I GGYRCC 2 cut(s) 937, 1859
AccBSI CCGCTC 1 cut(s) 764
AccII CGCG 1 cut(s) 177
AciI CCGC 5 cut(s) 263, 762, 1510, 1575, 1756
AclWI GGATC 2 cut(s) 1827, 1840
AcsI RAATTY 5 cut(s) 853, 1040, 1138, 1288, 1748
AcuI CTGAAG 3 cut(s) 770, 894, 1472
AcyI GRCGYC 1 cut(s) 1438
AfaI GTAC 5 cut(s) 639, 772, 939, 1790, 1931
AfiI CCNNNNNNNGG 7 cut(s) 242, 272, 1061, 1091, 1842, 1855, 1856
AflIII ACRYGT 1 cut(s) 544
AjnI CCWGG 6 cut(s) 37, 265, 1084, 1131, 1432, 1791
Alw21I GWGCWC 1 cut(s) 544
Alw26I GTCTC 6 cut(s) 23, 302, 533, 952, 992, 1528
Alw44I GTGCAC 1 cut(s) 540
AlwI GGATC 2 cut(s) 1827, 1840
AlwNI CAGNNNCTG 3 cut(s) 38, 1810, 1910
Ama87I CYCGRG 2 cut(s) 1160, 1712
AoxI GGCC 7 cut(s) 338, 572, 1079, 1156, 1400, 1430, 1899
ApaLI GTGCAC 1 cut(s) 540
ApeKI GCWGC 7 cut(s) 779, 1313, 1724, 1813, 1877, 1907, 1910
ApoI RAATTY 5 cut(s) 853, 1040, 1138, 1288, 1748
AseI ATTAAT 1 cut(s) 333
Asp700I GAANNNNTTC 1 cut(s) 1291
Asp718I GGTACC 1 cut(s) 937
AspLEI GCGC 1 cut(s) 1555
AspS9I GGNCC 5 cut(s) 260, 338, 1079, 1157, 1900
AsuHPI GGTGA 5 cut(s) 53, 377, 491, 1044, 1509
AvaI CYCGRG 2 cut(s) 1160, 1712
AvaII GGWCC 1 cut(s) 260
BaeGI GKGCMC 2 cut(s) 544, 1862
BaeI ACNNNNGTAYC 2 cut(s) 164, 197
BamHI GGATCC 1 cut(s) 1832
BanI GGYRCC 2 cut(s) 937, 1859
BarI GAAGNNNNNNTAC 2 cut(s) 492, 524
BauI CACGAG 1 cut(s) 1821
BbsI GAAGAC 2 cut(s) 476, 1478
Bbv12I GWGCWC 1 cut(s) 544
BbvCI CCTCAGC 1 cut(s) 843
BbvI GCAGC 7 cut(s) 766, 1300, 1736, 1825, 1889, 1894, 1897
BccI CCATC 5 cut(s) 427, 518, 1346, 1628, 1678
BcgI CGANNNNNNTGC 2 cut(s) 1802, 1836
BciT130I CCWGG 6 cut(s) 39, 267, 1086, 1133, 1434, 1793
BciVI GTATCC 1 cut(s) 724
BcoDI GTCTC 6 cut(s) 23, 302, 533, 952, 992, 1528
BfmI CTRYAG 5 cut(s) 297, 1314, 1811, 1866, 1911
BfuI GTATCC 1 cut(s) 724
BisI GCNGC 8 cut(s) 762, 780, 1314, 1725, 1814, 1878, 1908, 1911
BlsI GCNGC 8 cut(s) 763, 781, 1315, 1726, 1815, 1879, 1909, 1912
Bme1390I CCNGG 6 cut(s) 39, 267, 1086, 1133, 1434, 1793
Bme18I GGWCC 1 cut(s) 260
BmeT110I CYCGRG 2 cut(s) 1160, 1712
BmgT120I GGNCC 5 cut(s) 260, 338, 1079, 1157, 1900
BmiI GGNNCC 7 cut(s) 939, 1159, 1710, 1834, 1847, 1861, 1902
BmrFI CCNGG 6 cut(s) 39, 267, 1086, 1133, 1434, 1793
BmrI ACTGGG 1 cut(s) 1007
BmsI GCATC 7 cut(s) 801, 829, 1030, 1158, 1291, 1564, 1762
BmuI ACTGGG 1 cut(s) 1007
BpiI GAAGAC 2 cut(s) 476, 1478
BplI GAGNNNNNCTC 2 cut(s) 1250, 1282
BpmI CTGGAG 3 cut(s) 333, 1317, 1866
Bpu10I CCTNAGC 3 cut(s) 843, 1110, 1427
BpuEI CTTGAG 2 cut(s) 403, 515
BsaBI GATNNNNATC 1 cut(s) 708
BsaHI GRCGYC 1 cut(s) 1438
BsaI GGTCTC 1 cut(s) 533
BsaJI CCNNGG 4 cut(s) 37, 266, 736, 1564
BsaWI WCCGGW 2 cut(s) 640, 1842
BsaXI ACNNNNNCTCC 2 cut(s) 78, 108
Bsc4I CCNNNNNNNGG 7 cut(s) 242, 272, 1061, 1091, 1842, 1855, 1856
Bse1I ACTGG 2 cut(s) 316, 1013
Bse3DI GCAATG 3 cut(s) 450, 914, 1421
Bse8I GATNNNNATC 1 cut(s) 708
BseBI CCWGG 6 cut(s) 39, 267, 1086, 1133, 1434, 1793
BseDI CCNNGG 4 cut(s) 37, 266, 736, 1564
BseGI GGATG 9 cut(s) 112, 529, 649, 792, 814, 1021, 1357, 1537, 1699
BseJI GATNNNNATC 1 cut(s) 708
BseLI CCNNNNNNNGG 7 cut(s) 242, 272, 1061, 1091, 1842, 1855, 1856
BseMI GCAATG 3 cut(s) 450, 914, 1421
BseNI ACTGG 2 cut(s) 316, 1013
BseRI GAGGAG 3 cut(s) 613, 1703, 1887
BseSI GKGCMC 2 cut(s) 544, 1862
BseXI GCAGC 7 cut(s) 766, 1300, 1736, 1825, 1889, 1894, 1897
BseYI CCCAGC 2 cut(s) 1417, 1903
Bsh1236I CGCG 1 cut(s) 177
BshFI GGCC 7 cut(s) 340, 574, 1081, 1158, 1402, 1432, 1901
BshNI GGYRCC 2 cut(s) 937, 1859
BsiHKAI GWGCWC 1 cut(s) 544
BsiHKCI CYCGRG 2 cut(s) 1160, 1712
BsiSI CCGG 2 cut(s) 641, 1843
BslFI GGGAC 2 cut(s) 520, 968
BslI CCNNNNNNNGG 7 cut(s) 242, 272, 1061, 1091, 1842, 1855, 1856
BsmAI GTCTC 6 cut(s) 23, 302, 533, 952, 992, 1528
BsmBI CGTCTC 1 cut(s) 1528
BsmFI GGGAC 2 cut(s) 520, 968
BsmI GAATGC 4 cut(s) 317, 418, 1133, 1796
BsnI GGCC 7 cut(s) 340, 574, 1081, 1158, 1402, 1432, 1901
Bso31I GGTCTC 1 cut(s) 533
BsoBI CYCGRG 2 cut(s) 1160, 1712
Bsp1286I GDGCHC 2 cut(s) 544, 1862
Bsp1407I TGTACA 1 cut(s) 1929
Bsp143I GATC 4 cut(s) 709, 754, 1832, 1924
Bsp19I CCATGG 2 cut(s) 736, 1564
BspACI CCGC 5 cut(s) 263, 762, 1510, 1575, 1756
BspANI GGCC 7 cut(s) 340, 574, 1081, 1158, 1402, 1432, 1901
BspFNI CGCG 1 cut(s) 177
BspLI GGNNCC 7 cut(s) 939, 1159, 1710, 1834, 1847, 1861, 1902
BspMAI CTGCAG 4 cut(s) 1318, 1815, 1870, 1915
BspPI GGATC 2 cut(s) 1827, 1840
BspQI GCTCTTC 1 cut(s) 218
BspT107I GGYRCC 2 cut(s) 937, 1859
BspTNI GGTCTC 1 cut(s) 533
BsrBI CCGCTC 1 cut(s) 764
BsrDI GCAATG 3 cut(s) 450, 914, 1421
BsrGI TGTACA 1 cut(s) 1929
BsrI ACTGG 2 cut(s) 316, 1013
BssECI CCNNGG 4 cut(s) 37, 266, 736, 1564
BssMI GATC 4 cut(s) 709, 754, 1832, 1924
BssNI GRCGYC 1 cut(s) 1438
BssSI CACGAG 1 cut(s) 1821
BssT1I CCWWGG 2 cut(s) 736, 1564
Bst2BI CACGAG 1 cut(s) 1821
Bst2UI CCWGG 6 cut(s) 39, 267, 1086, 1133, 1434, 1793
Bst4CI ACNGT 4 cut(s) 50, 928, 1003, 1375
Bst6I CTCTTC 1 cut(s) 218
BstACI GRCGYC 1 cut(s) 1438
BstAPI GCANNNNNTGC 2 cut(s) 896, 1550
BstAUI TGTACA 1 cut(s) 1929
BstC8I GCNNGC 4 cut(s) 1225, 1605, 1609, 1756
BstDSI CCRYGG 2 cut(s) 736, 1564
BstENI CCTNNNNNAGG 1 cut(s) 1059
BstF5I GGATG 9 cut(s) 112, 529, 649, 792, 814, 1021, 1357, 1537, 1699
BstFNI CGCG 1 cut(s) 177
BstHHI GCGC 1 cut(s) 1555
BstKTI GATC 4 cut(s) 712, 757, 1835, 1927
BstMAI GTCTC 6 cut(s) 23, 302, 533, 952, 992, 1528
BstMBI GATC 4 cut(s) 709, 754, 1832, 1924
BstMWI GCNNNNNNNGC 7 cut(s) 758, 896, 1155, 1310, 1550, 1874, 1907
BstNI CCWGG 6 cut(s) 39, 267, 1086, 1133, 1434, 1793
BstNSI RCATGY 3 cut(s) 548, 1051, 1506
BstSCI CCNGG 6 cut(s) 37, 265, 1084, 1131, 1432, 1791
BstSFI CTRYAG 5 cut(s) 297, 1314, 1811, 1866, 1911
BstSLI GKGCMC 2 cut(s) 544, 1862
BstUI CGCG 1 cut(s) 177
BstV1I GCAGC 7 cut(s) 766, 1300, 1736, 1825, 1889, 1894, 1897
BstV2I GAAGAC 2 cut(s) 476, 1478
BstX2I RGATCY 1 cut(s) 1832
BstYI RGATCY 1 cut(s) 1832
BsuI GTATCC 1 cut(s) 724
BsuRI GGCC 7 cut(s) 340, 574, 1081, 1158, 1402, 1432, 1901
BtgI CCRYGG 2 cut(s) 736, 1564
BtgZI GCGATG 1 cut(s) 1697
BtsCI GGATG 9 cut(s) 112, 529, 649, 792, 814, 1021, 1357, 1537, 1699
BtsI GCAGTG 1 cut(s) 1863
BtsIMutI CAGTG 4 cut(s) 794, 1020, 1587, 1863
Cac8I GCNNGC 4 cut(s) 1225, 1605, 1609, 1756
CaiI CAGNNNCTG 3 cut(s) 38, 1810, 1910
CfoI GCGC 1 cut(s) 1555
Cfr13I GGNCC 5 cut(s) 260, 338, 1079, 1157, 1900
CseI GACGC 1 cut(s) 965
Csp6I GTAC 5 cut(s) 638, 771, 938, 1789, 1930
CviAII CATG 9 cut(s) 545, 556, 688, 737, 951, 1048, 1503, 1565, 1744
CviQI GTAC 5 cut(s) 638, 771, 938, 1789, 1930
DpnI GATC 4 cut(s) 711, 756, 1834, 1926
DpnII GATC 4 cut(s) 709, 754, 1832, 1924
Eam1104I CTCTTC 1 cut(s) 218
EarI CTCTTC 1 cut(s) 218
Eco130I CCWWGG 2 cut(s) 736, 1564
Eco147I AGGCCT 1 cut(s) 1432
Eco31I GGTCTC 1 cut(s) 533
Eco32I GATATC 1 cut(s) 1585
Eco47I GGWCC 1 cut(s) 260
Eco57I CTGAAG 3 cut(s) 770, 894, 1472
Eco88I CYCGRG 2 cut(s) 1160, 1712
EcoNI CCTNNNNNAGG 1 cut(s) 1059
EcoO109I RGGNCCY 1 cut(s) 1157
EcoRI GAATTC 1 cut(s) 853
EcoRII CCWGG 6 cut(s) 37, 265, 1084, 1131, 1432, 1791
EcoRV GATATC 1 cut(s) 1585
EcoT14I CCWWGG 2 cut(s) 736, 1564
ErhI CCWWGG 2 cut(s) 736, 1564
Esp3I CGTCTC 1 cut(s) 1528
FaeI CATG 9 cut(s) 548, 559, 691, 740, 954, 1051, 1506, 1568, 1747
FaqI GGGAC 2 cut(s) 520, 968
FatI CATG 9 cut(s) 544, 555, 687, 736, 950, 1047, 1502, 1564, 1743
FauI CCCGC 1 cut(s) 1763
Fnu4HI GCNGC 8 cut(s) 762, 780, 1314, 1725, 1814, 1878, 1908, 1911
FokI GGATG 9 cut(s) 119, 536, 656, 779, 821, 1008, 1364, 1544, 1706
Fsp4HI GCNGC 8 cut(s) 762, 780, 1314, 1725, 1814, 1878, 1908, 1911
FspI TGCGCA 1 cut(s) 1554
GlaI GCGC 1 cut(s) 1554
GluI GCNGC 8 cut(s) 762, 780, 1314, 1725, 1814, 1878, 1908, 1911
GsaI CCCAGC 2 cut(s) 1421, 1907
GsuI CTGGAG 3 cut(s) 333, 1317, 1866
HaeIII GGCC 7 cut(s) 340, 574, 1081, 1158, 1402, 1432, 1901
HapII CCGG 2 cut(s) 641, 1843
HgaI GACGC 1 cut(s) 965
HhaI GCGC 1 cut(s) 1555
Hin1I GRCGYC 1 cut(s) 1438
Hin1II CATG 9 cut(s) 548, 559, 691, 740, 954, 1051, 1506, 1568, 1747
Hin6I GCGC 1 cut(s) 1553
HinP1I GCGC 1 cut(s) 1553
HincII GTYRAC 1 cut(s) 1537
HindII GTYRAC 1 cut(s) 1537
HindIII AAGCTT 1 cut(s) 1476
HinfI GANTC 7 cut(s) 446, 472, 672, 1265, 1323, 1739, 1807
HpaII CCGG 2 cut(s) 641, 1843
HphI GGTGA 5 cut(s) 53, 377, 491, 1044, 1509
Hpy166II GTNNAC 3 cut(s) 542, 638, 1537
Hpy188I TCNGA 7 cut(s) 171, 513, 597, 1491, 1625, 1806, 1837
Hpy8I GTNNAC 3 cut(s) 542, 638, 1537
HpyAV CCTTC 8 cut(s) 382, 794, 918, 1065, 1112, 1633, 1645, 1656
HpyCH4III ACNGT 4 cut(s) 50, 928, 1003, 1375
HpyCH4IV ACGT 3 cut(s) 100, 1200, 1438
HpyF10VI GCNNNNNNNGC 7 cut(s) 758, 896, 1155, 1310, 1550, 1874, 1907
HpySE526I ACGT 3 cut(s) 100, 1200, 1438
Hsp92I GRCGYC 1 cut(s) 1438
Hsp92II CATG 9 cut(s) 548, 559, 691, 740, 954, 1051, 1506, 1568, 1747
HspAI GCGC 1 cut(s) 1553
KpnI GGTACC 1 cut(s) 941
Kzo9I GATC 4 cut(s) 709, 754, 1832, 1924
LguI GCTCTTC 1 cut(s) 218
LmnI GCTCC 9 cut(s) 64, 314, 460, 560, 1018, 1240, 1388, 1874, 1885
Lsp1109I GCAGC 7 cut(s) 766, 1300, 1736, 1825, 1889, 1894, 1897
LweI GCATC 7 cut(s) 801, 829, 1030, 1158, 1291, 1564, 1762
MaeII ACGT 3 cut(s) 100, 1200, 1438
MaeIII GTNAC 5 cut(s) 189, 865, 1050, 1164, 1515
MalI GATC 4 cut(s) 711, 756, 1834, 1926
MbiI CCGCTC 1 cut(s) 764
MboI GATC 4 cut(s) 709, 754, 1832, 1924
MfeI CAATTG 1 cut(s) 1116
MflI RGATCY 1 cut(s) 1832
MhlI GDGCHC 2 cut(s) 544, 1862
MluCI AATT 8 cut(s) 116, 834, 853, 1040, 1116, 1138, 1288, 1748
MlyI GAGTC 4 cut(s) 466, 1259, 1332, 1801
MmeI TCCRAC 3 cut(s) 124, 631, 1860
MroXI GAANNNNTTC 1 cut(s) 1291
MseI TTAA 2 cut(s) 333, 518
MslI CAYNNNNRTG 3 cut(s) 227, 741, 1563
MspA1I CMGCKG 2 cut(s) 1907, 1935
MspI CCGG 2 cut(s) 641, 1843
MspR9I CCNGG 6 cut(s) 39, 267, 1086, 1133, 1434, 1793
MunI CAATTG 1 cut(s) 1116
Mva1269I GAATGC 4 cut(s) 317, 418, 1133, 1796
MvaI CCWGG 6 cut(s) 39, 267, 1086, 1133, 1434, 1793
MvnI CGCG 1 cut(s) 177
MwoI GCNNNNNNNGC 7 cut(s) 758, 896, 1155, 1310, 1550, 1874, 1907
NcoI CCATGG 2 cut(s) 736, 1564
NdeII GATC 4 cut(s) 709, 754, 1832, 1924
NlaIII CATG 9 cut(s) 548, 559, 691, 740, 954, 1051, 1506, 1568, 1747
NlaIV GGNNCC 7 cut(s) 939, 1159, 1710, 1834, 1847, 1861, 1902
NmuCI GTSAC 3 cut(s) 865, 1050, 1515
NsbI TGCGCA 1 cut(s) 1554
NspI RCATGY 3 cut(s) 548, 1051, 1506
PceI AGGCCT 1 cut(s) 1432
PciI ACATGT 1 cut(s) 544
PciSI GCTCTTC 1 cut(s) 218
PctI GAATGC 4 cut(s) 317, 418, 1133, 1796
PdmI GAANNNNTTC 1 cut(s) 1291
PfeI GAWTC 3 cut(s) 446, 672, 1739
PflFI GACNNNGTC 1 cut(s) 977
PkrI GCNGC 8 cut(s) 763, 781, 1315, 1726, 1815, 1879, 1909, 1912
PleI GAGTC 4 cut(s) 466, 1259, 1331, 1801
PpsI GAGTC 4 cut(s) 466, 1259, 1331, 1801
PscI ACATGT 1 cut(s) 544
PshBI ATTAAT 1 cut(s) 333
Psp6I CCWGG 6 cut(s) 37, 265, 1084, 1131, 1432, 1791
PspFI CCCAGC 2 cut(s) 1417, 1903
PspGI CCWGG 6 cut(s) 37, 265, 1084, 1131, 1432, 1791
PspN4I GGNNCC 7 cut(s) 939, 1159, 1710, 1834, 1847, 1861, 1902
PspPI GGNCC 5 cut(s) 260, 338, 1079, 1157, 1900
PstI CTGCAG 4 cut(s) 1318, 1815, 1870, 1915
PstNI CAGNNNCTG 3 cut(s) 38, 1810, 1910
PsuI RGATCY 1 cut(s) 1832
PsyI GACNNNGTC 1 cut(s) 977
PvuII CAGCTG 2 cut(s) 1907, 1935
RsaI GTAC 5 cut(s) 639, 772, 939, 1790, 1931
RsaNI GTAC 5 cut(s) 638, 771, 938, 1789, 1930
RseI CAYNNNNRTG 3 cut(s) 227, 741, 1563
SapI GCTCTTC 1 cut(s) 218
SaqAI TTAA 2 cut(s) 333, 518
SatI GCNGC 8 cut(s) 762, 780, 1314, 1725, 1814, 1878, 1908, 1911
Sau3AI GATC 4 cut(s) 709, 754, 1832, 1924
Sau96I GGNCC 5 cut(s) 260, 338, 1079, 1157, 1900
SchI GAGTC 4 cut(s) 466, 1259, 1332, 1801
ScrFI CCNGG 6 cut(s) 39, 267, 1086, 1133, 1434, 1793
SduI GDGCHC 2 cut(s) 544, 1862
SfaNI GCATC 7 cut(s) 801, 829, 1030, 1158, 1291, 1564, 1762
SfcI CTRYAG 5 cut(s) 297, 1314, 1811, 1866, 1911
SinI GGWCC 1 cut(s) 260
SmiMI CAYNNNNRTG 3 cut(s) 227, 741, 1563
SmlI CTYRAG 2 cut(s) 382, 530
SmoI CTYRAG 2 cut(s) 382, 530
Sse9I AATT 8 cut(s) 116, 834, 853, 1040, 1116, 1138, 1288, 1748
SseBI AGGCCT 1 cut(s) 1432
SsiI CCGC 5 cut(s) 263, 762, 1510, 1575, 1756
SspI AATATT 1 cut(s) 1633
StuI AGGCCT 1 cut(s) 1432
StyD4I CCNGG 6 cut(s) 37, 265, 1084, 1131, 1432, 1791
StyI CCWWGG 2 cut(s) 736, 1564
TaaI ACNGT 4 cut(s) 50, 928, 1003, 1375
TaiI ACGT 3 cut(s) 103, 1203, 1441
TaqI TCGA 3 cut(s) 714, 1268, 1734
TasI AATT 8 cut(s) 116, 834, 853, 1040, 1116, 1138, 1288, 1748
TatI WGTACW 2 cut(s) 770, 1929
TauI GCSGC 1 cut(s) 764
TfiI GAWTC 3 cut(s) 446, 672, 1739
Tru1I TTAA 2 cut(s) 333, 518
Tru9I TTAA 2 cut(s) 333, 518
TscAI CASTG 4 cut(s) 794, 1020, 1594, 1870
TseFI GTSAC 3 cut(s) 865, 1050, 1515
TseI GCWGC 7 cut(s) 779, 1313, 1724, 1813, 1877, 1907, 1910
Tsp45I GTSAC 3 cut(s) 865, 1050, 1515
TspDTI ATGAA 7 cut(s) 660, 704, 888, 1132, 1140, 1488, 1760
TspGWI ACGGA 2 cut(s) 785, 1193
TspRI CASTG 4 cut(s) 794, 1020, 1594, 1870
Tth111I GACNNNGTC 1 cut(s) 977
VneI GTGCAC 1 cut(s) 540
VpaK11BI GGWCC 1 cut(s) 260
VspI ATTAAT 1 cut(s) 333
XagI CCTNNNNNAGG 1 cut(s) 1059
XapI RAATTY 5 cut(s) 853, 1040, 1138, 1288, 1748
XceI RCATGY 3 cut(s) 548, 1051, 1506
XmnI GAANNNNTTC 1 cut(s) 1291
ZraI GACGTC 1 cut(s) 1439
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.