Rh7CG206100

Heat shock chaperonin-binding motif.

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
18412505 .. 18418082
5578 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG206100.1

Sequence Viewer

Length: 1278 bp
ATGGAGGAAGCGAAGCTGAAGCAATTGAAGCATTTCGTCGAGCAGTGCAAGTCCGATCCCTCCATTCTCGCCGATCCTTCGCTCTCCTTCTTCCGCGATTACCTTGAGAGTCTCGGTGCTACTGTGCCTTCATCTGCTGGCAAGAATGAGGATTCGAAACCGAGGAGCTATGTAGTGGAGGAGAGCGACGACGACATGTCGGAGGAGGCTGAGCCAGAGCAGGTTCATGTTCAGGAAGAAGAGGAAGAAGAGATAGTCGAATCTGATCTCGAGCTTGAAGGCGACATTGTGGAGCCTGACAATGAACCTCCTCAGAAGATGGGAGACACATCTGTTGAGGTCACTGAAGAGAACCGTGATGCCTCGCAGGCGGCCAAGGGCAAAGCTATTGAGGCCATTTCAGAAGGTAGCTTGGAGGAAGCCATTGAGCATCTCACTGAGGCAATTTTGCTCAATCCTACTTCGGCAATTATGTACGGCACCAGAGCCAGTGTGTACATCAAAATGAAAAAACCTAATGCTGCCATTCGTGATGCCAACGCTGCTTTGGAGATTAATCCCGACTCTGCTAAAGGCTACAAGTCTCGTGGCATAGCTCATTCAATGCTTGGTAATTGGGAAGAGGCTGCAAAGGACCTCCACTTGGCATCAAAGCTAGATTTTGATGAGGAAATAAGTGCAGTACTTAAGAAGGTTGAACCTAATGTACACAAGATCCAGGAACACCGTCGTAAGTATGATAGGCTTCGTAAGGAAAGAGAGGACAGAAAGATTGAGCGTGAGAGACAACGTCGCAAAGCTGAGGCGCAGGCTGCGTATGAGAAGGCTAAGAAGCAAGAGCAGTCGTCTTCTAGCAGAAGACCTGGAGGCTTTCCTGGTGGAATGCCTGGAGGTTTTCCAGGGGCAGGAGGGATGCCAGGTGGCTTTCCTGGGGCAGGAGGGATGCCAGGTGGCTTTCCTGGGGCAGGAGGGATGCCAGGTGGGTTTCCAGGCGCAGGAGGAATGCCAGGTGGTTTTCCAGGCGCAGGAGGAATGCCGGGTGGCTTTCCAGGCGCAGGAGGTGCGCCTGGAGGCTCTGCAGGAGGGGTTCCTGGAAATGTTGACTTCAGCAAAATATTAAATGACCCAGAACTGATGGCTGCATTTAGTGATCCTGAAGTTATGGCTGCTCTTCAAGATGTGATGAAGAACCCTGCTAATCTAGCAAAGCATCAAGCAAATCCTAAGGTGGCGCCTATAATTGCCAAGATGATGAGCAAATTTGGTGGACCGAAGTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

425

Amino Acids

45.24

Weight (kDa)

5.04

Isoelectric Point (pI)

63.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HipN PF18253 3 - 43 2.1e-19 Hsp70-interacting protein N N-terminal domain
STI1-HOP_DP PF17830 369 - 419 1.2e-12 STI1/HOP, DP domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013195)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 211
AccB1I GGYRCC 2 cut(s) 479, 1231
AccII CGCG 1 cut(s) 96
AciI CCGC 2 cut(s) 94, 371
AclWI GGATC 4 cut(s) 50, 68, 709, 1145
AcoI YGGCCR 1 cut(s) 372
AcsI RAATTY 1 cut(s) 1259
AcuI CTGAAG 4 cut(s) 38, 366, 1090, 1176
AcyI GRCGYC 1 cut(s) 1232
AfaI GTAC 4 cut(s) 476, 497, 684, 708
AfiI CCNNNNNNNGG 7 cut(s) 643, 905, 935, 965, 995, 1025, 1055
AflII CTTAAG 1 cut(s) 686
AflIII ACRYGT 1 cut(s) 195
AgsI TTSAA 5 cut(s) 28, 278, 603, 698, 1175
AhdI GACNNNNNGTC 1 cut(s) 196
AluBI AGCT 8 cut(s) 16, 168, 274, 386, 411, 596, 655, 800
AluI AGCT 8 cut(s) 16, 168, 274, 386, 411, 596, 655, 800
Alw26I GTCTC 4 cut(s) 116, 318, 588, 778
AlwI GGATC 4 cut(s) 50, 68, 709, 1145
Ama87I CYCGRG 1 cut(s) 269
AoxI GGCC 2 cut(s) 372, 393
ApeKI GCWGC 6 cut(s) 521, 542, 626, 812, 1139, 1166
ApoI RAATTY 1 cut(s) 1259
AseI ATTAAT 1 cut(s) 555
Asp700I GAANNNNTTC 1 cut(s) 32
AspLEI GCGC 6 cut(s) 808, 995, 1025, 1055, 1066, 1234
AspS9I GGNCC 2 cut(s) 634, 1268
AsuC2I CCSGG 1 cut(s) 1038
AsuII TTCGAA 1 cut(s) 155
AvaI CYCGRG 1 cut(s) 269
AvaII GGWCC 2 cut(s) 634, 1268
AxyI CCTNAGG 1 cut(s) 1224
BanI GGYRCC 2 cut(s) 479, 1231
BauI CACGAG 1 cut(s) 585
BbsI GAAGAC 2 cut(s) 840, 865
BbvCI CCTCAGC 1 cut(s) 801
BbvI GCAGC 6 cut(s) 508, 529, 613, 799, 1126, 1153
BccI CCATC 2 cut(s) 313, 1129
BceAI ACGGC 1 cut(s) 493
BcnI CCSGG 1 cut(s) 1038
BcoDI GTCTC 4 cut(s) 116, 318, 588, 778
BfaI CTAG 3 cut(s) 656, 852, 1202
BfmI CTRYAG 1 cut(s) 1077
BfoI RGCGCY 1 cut(s) 1235
BfrI CTTAAG 1 cut(s) 686
BfuAI ACCTGC 1 cut(s) 211
BglI GCCNNNNNGGC 1 cut(s) 368
BisI GCNGC 7 cut(s) 372, 522, 543, 627, 813, 1140, 1167
BlpI GCTNAGC 1 cut(s) 210
BlsI GCNGC 7 cut(s) 373, 523, 544, 628, 814, 1141, 1168
BmcAI AGTACT 1 cut(s) 684
Bme18I GGWCC 2 cut(s) 634, 1268
BmeRI GACNNNNNGTC 1 cut(s) 196
BmeT110I CYCGRG 1 cut(s) 269
BmgT120I GGNCC 2 cut(s) 634, 1268
BmiI GGNNCC 4 cut(s) 294, 481, 1089, 1233
BmsI GCATC 8 cut(s) 349, 439, 523, 656, 903, 933, 963, 1219
BpiI GAAGAC 2 cut(s) 840, 865
BpmI CTGGAG 3 cut(s) 885, 909, 1089
Bpu10I CCTNAGC 1 cut(s) 801
Bpu1102I GCTNAGC 1 cut(s) 210
Bpu14I TTCGAA 1 cut(s) 155
BpuEI CTTGAG 1 cut(s) 125
BpuMI CCSGG 1 cut(s) 1038
BsaHI GRCGYC 1 cut(s) 1232
BsaJI CCNNGG 5 cut(s) 161, 375, 899, 929, 959
Bsc4I CCNNNNNNNGG 7 cut(s) 643, 905, 935, 965, 995, 1025, 1055
Bse1I ACTGG 1 cut(s) 489
Bse21I CCTNAGG 1 cut(s) 1224
BseDI CCNNGG 5 cut(s) 161, 375, 899, 929, 959
BseGI GGATG 3 cut(s) 918, 948, 978
BseLI CCNNNNNNNGG 7 cut(s) 643, 905, 935, 965, 995, 1025, 1055
BseMII CTCAG 4 cut(s) 201, 326, 429, 792
BseNI ACTGG 1 cut(s) 489
BseRI GAGGAG 4 cut(s) 178, 194, 218, 300
BseXI GCAGC 6 cut(s) 508, 529, 613, 799, 1126, 1153
BsgI GTGCAG 1 cut(s) 699
Bsh1236I CGCG 1 cut(s) 96
BshFI GGCC 2 cut(s) 374, 395
BshNI GGYRCC 2 cut(s) 479, 1231
BsiHKCI CYCGRG 1 cut(s) 269
BsiSI CCGG 1 cut(s) 1037
BslI CCNNNNNNNGG 7 cut(s) 643, 905, 935, 965, 995, 1025, 1055
BsmAI GTCTC 4 cut(s) 116, 318, 588, 778
BsmI GAATGC 3 cut(s) 888, 1008, 1038
BsnI GGCC 2 cut(s) 374, 395
BsoBI CYCGRG 1 cut(s) 269
Bsp119I TTCGAA 1 cut(s) 155
Bsp1407I TGTACA 2 cut(s) 495, 706
Bsp143I GATC 5 cut(s) 55, 73, 265, 714, 1150
Bsp1720I GCTNAGC 1 cut(s) 210
BspACI CCGC 2 cut(s) 94, 371
BspANI GGCC 2 cut(s) 374, 395
BspCNI CTCAG 4 cut(s) 202, 325, 430, 793
BspFNI CGCG 1 cut(s) 96
BspLI GGNNCC 4 cut(s) 294, 481, 1089, 1233
BspMAI CTGCAG 1 cut(s) 1081
BspMI ACCTGC 1 cut(s) 211
BspPI GGATC 4 cut(s) 50, 68, 709, 1145
BspQI GCTCTTC 1 cut(s) 1176
BspT104I TTCGAA 1 cut(s) 155
BspT107I GGYRCC 2 cut(s) 479, 1231
BspTI CTTAAG 1 cut(s) 686
BsrGI TGTACA 2 cut(s) 495, 706
BsrI ACTGG 1 cut(s) 489
BssECI CCNNGG 5 cut(s) 161, 375, 899, 929, 959
BssMI GATC 5 cut(s) 55, 73, 265, 714, 1150
BssNI GRCGYC 1 cut(s) 1232
BssSI CACGAG 1 cut(s) 585
BssT1I CCWWGG 1 cut(s) 375
Bst2BI CACGAG 1 cut(s) 585
Bst4CI ACNGT 3 cut(s) 124, 356, 728
Bst6I CTCTTC 5 cut(s) 234, 243, 342, 615, 1176
BstACI GRCGYC 1 cut(s) 1232
BstAFI CTTAAG 1 cut(s) 686
BstAPI GCANNNNNTGC 1 cut(s) 1061
BstAUI TGTACA 2 cut(s) 495, 706
BstBI TTCGAA 1 cut(s) 155
BstC8I GCNNGC 3 cut(s) 139, 369, 810
BstDEI CTNAG 6 cut(s) 210, 312, 438, 801, 828, 1224
BstENI CCTNNNNNAGG 2 cut(s) 933, 963
BstF5I GGATG 3 cut(s) 918, 948, 978
BstFNI CGCG 1 cut(s) 96
BstH2I RGCGCY 1 cut(s) 1235
BstHHI GCGC 6 cut(s) 808, 995, 1025, 1055, 1066, 1234
BstKTI GATC 5 cut(s) 58, 76, 268, 717, 1153
BstMAI GTCTC 4 cut(s) 116, 318, 588, 778
BstMBI GATC 5 cut(s) 55, 73, 265, 714, 1150
BstMWI GCNNNNNNNGC 8 cut(s) 28, 368, 392, 542, 812, 1050, 1061, 1202
BstNSI RCATGY 1 cut(s) 199
BstSFI CTRYAG 1 cut(s) 1077
BstUI CGCG 1 cut(s) 96
BstV1I GCAGC 6 cut(s) 508, 529, 613, 799, 1126, 1153
BstV2I GAAGAC 2 cut(s) 840, 865
BstX2I RGATCY 1 cut(s) 714
BstYI RGATCY 1 cut(s) 714
Bsu36I CCTNAGG 1 cut(s) 1224
BsuRI GGCC 2 cut(s) 374, 395
BtsCI GGATG 3 cut(s) 918, 948, 978
BtsI GCAGTG 1 cut(s) 50
BtsIMutI CAGTG 4 cut(s) 50, 342, 435, 496
BveI ACCTGC 1 cut(s) 211
Cac8I GCNNGC 3 cut(s) 139, 369, 810
CfoI GCGC 6 cut(s) 808, 995, 1025, 1055, 1066, 1234
Cfr13I GGNCC 2 cut(s) 634, 1268
Csp6I GTAC 4 cut(s) 475, 496, 683, 707
CspCI CAANNNNNGTGG 3 cut(s) 568, 603, 1246
CviAII CATG 2 cut(s) 196, 227
CviQI GTAC 4 cut(s) 475, 496, 683, 707
DdeI CTNAG 6 cut(s) 210, 312, 438, 801, 828, 1224
DinI GGCGCC 1 cut(s) 1233
DpnI GATC 5 cut(s) 57, 75, 267, 716, 1152
DpnII GATC 5 cut(s) 55, 73, 265, 714, 1150
DriI GACNNNNNGTC 1 cut(s) 196
EaeI YGGCCR 1 cut(s) 372
Eam1104I CTCTTC 5 cut(s) 234, 243, 342, 615, 1176
Eam1105I GACNNNNNGTC 1 cut(s) 196
EarI CTCTTC 5 cut(s) 234, 243, 342, 615, 1176
Eco130I CCWWGG 1 cut(s) 375
Eco47I GGWCC 2 cut(s) 634, 1268
Eco57I CTGAAG 4 cut(s) 38, 366, 1090, 1176
Eco81I CCTNAGG 1 cut(s) 1224
Eco88I CYCGRG 1 cut(s) 269
EcoNI CCTNNNNNAGG 2 cut(s) 933, 963
EcoO109I RGGNCCY 1 cut(s) 634
EcoT14I CCWWGG 1 cut(s) 375
EgeI GGCGCC 1 cut(s) 1233
EheI GGCGCC 1 cut(s) 1233
ErhI CCWWGG 1 cut(s) 375
FaeI CATG 2 cut(s) 199, 230
FaiI YATR 9 cut(s) 171, 197, 228, 473, 593, 738, 819, 1163, 1238
FatI CATG 2 cut(s) 195, 226
Fnu4HI GCNGC 7 cut(s) 372, 522, 543, 627, 813, 1140, 1167
FokI GGATG 3 cut(s) 925, 955, 985
Fsp4HI GCNGC 7 cut(s) 372, 522, 543, 627, 813, 1140, 1167
FspBI CTAG 3 cut(s) 656, 852, 1202
GlaI GCGC 6 cut(s) 807, 994, 1024, 1054, 1065, 1233
GluI GCNGC 7 cut(s) 372, 522, 543, 627, 813, 1140, 1167
GsuI CTGGAG 3 cut(s) 885, 909, 1089
HaeII RGCGCY 1 cut(s) 1235
HaeIII GGCC 2 cut(s) 374, 395
HapII CCGG 1 cut(s) 1037
HhaI GCGC 6 cut(s) 808, 995, 1025, 1055, 1066, 1234
Hin1I GRCGYC 1 cut(s) 1232
Hin1II CATG 2 cut(s) 199, 230
Hin6I GCGC 6 cut(s) 806, 993, 1023, 1053, 1064, 1232
HinP1I GCGC 6 cut(s) 806, 993, 1023, 1053, 1064, 1232
HincII GTYRAC 1 cut(s) 1102
HindII GTYRAC 1 cut(s) 1102
HinfI GANTC 4 cut(s) 109, 152, 260, 563
HpaII CCGG 1 cut(s) 1037
Hpy166II GTNNAC 4 cut(s) 496, 709, 1102, 1268
Hpy188I TCNGA 5 cut(s) 55, 202, 265, 315, 403
Hpy188III TCNNGA 6 cut(s) 233, 269, 530, 560, 1154, 1175
Hpy8I GTNNAC 4 cut(s) 496, 709, 1102, 1268
Hpy99I CGWCG 5 cut(s) 41, 191, 194, 732, 795
HpyAV CCTTC 7 cut(s) 87, 97, 138, 272, 398, 685, 817
HpyCH4III ACNGT 3 cut(s) 124, 356, 728
HpyCH4IV ACGT 1 cut(s) 790
HpyCH4V TGCA 5 cut(s) 48, 629, 680, 1079, 1142
HpyF10VI GCNNNNNNNGC 8 cut(s) 28, 368, 392, 542, 812, 1050, 1061, 1202
HpyF3I CTNAG 6 cut(s) 210, 312, 438, 801, 828, 1224
HpySE526I ACGT 1 cut(s) 790
Hsp92I GRCGYC 1 cut(s) 1232
Hsp92II CATG 2 cut(s) 199, 230
HspAI GCGC 6 cut(s) 806, 993, 1023, 1053, 1064, 1232
KasI GGCGCC 1 cut(s) 1231
Kzo9I GATC 5 cut(s) 55, 73, 265, 714, 1150
LguI GCTCTTC 1 cut(s) 1176
LmnI GCTCC 2 cut(s) 165, 292
Lsp1109I GCAGC 6 cut(s) 508, 529, 613, 799, 1126, 1153
LweI GCATC 8 cut(s) 349, 439, 523, 656, 903, 933, 963, 1219
MaeI CTAG 3 cut(s) 656, 852, 1202
MaeII ACGT 1 cut(s) 790
MaeIII GTNAC 1 cut(s) 340
MalI GATC 5 cut(s) 57, 75, 267, 716, 1152
MboI GATC 5 cut(s) 55, 73, 265, 714, 1150
MfeI CAATTG 1 cut(s) 23
MflI RGATCY 1 cut(s) 714
MluCI AATT 6 cut(s) 23, 444, 468, 613, 1239, 1259
Mly113I GGCGCC 1 cut(s) 1232
MlyI GAGTC 2 cut(s) 118, 557
MmeI TCCRAC 1 cut(s) 180
MroXI GAANNNNTTC 1 cut(s) 32
MseI TTAA 3 cut(s) 555, 687, 1118
MslI CAYNNNNRTG 1 cut(s) 503
MspCI CTTAAG 1 cut(s) 686
MspI CCGG 1 cut(s) 1037
MunI CAATTG 1 cut(s) 23
Mva1269I GAATGC 3 cut(s) 888, 1008, 1038
MvnI CGCG 1 cut(s) 96
MwoI GCNNNNNNNGC 8 cut(s) 28, 368, 392, 542, 812, 1050, 1061, 1202
NarI GGCGCC 1 cut(s) 1232
NciI CCSGG 1 cut(s) 1038
NdeII GATC 5 cut(s) 55, 73, 265, 714, 1150
NlaIII CATG 2 cut(s) 199, 230
NlaIV GGNNCC 4 cut(s) 294, 481, 1089, 1233
NmuCI GTSAC 1 cut(s) 340
NspI RCATGY 1 cut(s) 199
NspV TTCGAA 1 cut(s) 155
PaeR7I CTCGAG 1 cut(s) 269
PciI ACATGT 1 cut(s) 195
PciSI GCTCTTC 1 cut(s) 1176
PctI GAATGC 3 cut(s) 888, 1008, 1038
PdmI GAANNNNTTC 1 cut(s) 32
PfeI GAWTC 2 cut(s) 152, 260
PflFI GACNNNGTC 1 cut(s) 789
PfoI TCCNGGA 2 cut(s) 717, 1090
PkrI GCNGC 7 cut(s) 373, 523, 544, 628, 814, 1141, 1168
PleI GAGTC 2 cut(s) 117, 557
PluTI GGCGCC 1 cut(s) 1235
PpsI GAGTC 2 cut(s) 117, 557
PpuMI RGGWCCY 1 cut(s) 634
PscI ACATGT 1 cut(s) 195
PshBI ATTAAT 1 cut(s) 555
Psp5II RGGWCCY 1 cut(s) 634
PspN4I GGNNCC 4 cut(s) 294, 481, 1089, 1233
PspPI GGNCC 2 cut(s) 634, 1268
PspPPI RGGWCCY 1 cut(s) 634
PsrI GAACNNNNNNTAC 2 cut(s) 690, 722
PstI CTGCAG 1 cut(s) 1081
PsuI RGATCY 1 cut(s) 714
PsyI GACNNNGTC 1 cut(s) 789
RsaI GTAC 4 cut(s) 476, 497, 684, 708
RsaNI GTAC 4 cut(s) 475, 496, 683, 707
RseI CAYNNNNRTG 1 cut(s) 503
SapI GCTCTTC 1 cut(s) 1176
SaqAI TTAA 3 cut(s) 555, 687, 1118
SatI GCNGC 7 cut(s) 372, 522, 543, 627, 813, 1140, 1167
Sau3AI GATC 5 cut(s) 55, 73, 265, 714, 1150
Sau96I GGNCC 2 cut(s) 634, 1268
ScaI AGTACT 1 cut(s) 684
SchI GAGTC 2 cut(s) 118, 557
SfaNI GCATC 8 cut(s) 349, 439, 523, 656, 903, 933, 963, 1219
SfcI CTRYAG 1 cut(s) 1077
SfoI GGCGCC 1 cut(s) 1233
Sfr274I CTCGAG 1 cut(s) 269
SfuI TTCGAA 1 cut(s) 155
SinI GGWCC 2 cut(s) 634, 1268
SlaI CTCGAG 1 cut(s) 269
SmiMI CAYNNNNRTG 1 cut(s) 503
SmlI CTYRAG 3 cut(s) 104, 269, 686
SmoI CTYRAG 3 cut(s) 104, 269, 686
Sse9I AATT 6 cut(s) 23, 444, 468, 613, 1239, 1259
SsiI CCGC 2 cut(s) 94, 371
SspDI GGCGCC 1 cut(s) 1231
SspI AATATT 1 cut(s) 1116
SspMI CTAG 3 cut(s) 656, 852, 1202
StyI CCWWGG 1 cut(s) 375
TaaI ACNGT 3 cut(s) 124, 356, 728
TaiI ACGT 1 cut(s) 793
TaqI TCGA 4 cut(s) 39, 155, 258, 270
TasI AATT 6 cut(s) 23, 444, 468, 613, 1239, 1259
TatI WGTACW 3 cut(s) 495, 682, 706
TauI GCSGC 1 cut(s) 374
TfiI GAWTC 2 cut(s) 152, 260
Tru1I TTAA 3 cut(s) 555, 687, 1118
Tru9I TTAA 3 cut(s) 555, 687, 1118
TscAI CASTG 4 cut(s) 50, 349, 442, 496
TseFI GTSAC 1 cut(s) 340
TseI GCWGC 6 cut(s) 521, 542, 626, 812, 1139, 1166
Tsp45I GTSAC 1 cut(s) 340
TspDTI ATGAA 5 cut(s) 120, 215, 318, 521, 1199
TspRI CASTG 4 cut(s) 50, 349, 442, 496
Tth111I GACNNNGTC 1 cut(s) 789
Vha464I CTTAAG 1 cut(s) 686
VpaK11BI GGWCC 2 cut(s) 634, 1268
VspI ATTAAT 1 cut(s) 555
XagI CCTNNNNNAGG 2 cut(s) 933, 963
XapI RAATTY 1 cut(s) 1259
XceI RCATGY 1 cut(s) 199
XcmI CCANNNNNNNNNTGG 1 cut(s) 544
XhoI CTCGAG 1 cut(s) 269
XmnI GAANNNNTTC 1 cut(s) 32
XspI CTAG 3 cut(s) 656, 852, 1202
ZrmI AGTACT 1 cut(s) 684
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.