Rh7CG317800

Peptidyl-prolyl cis-trans isomerase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0009566
Physical Location & Seq
Forward (+)
33898473 .. 33900846
2374 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG317800.1

Sequence Viewer

Length: 744 bp
ATGTTGGCACCAGAGTCTGTTACTCCCAAGTTTCCAACGGCCATGGCATCATCAGTAAGGTGCTTGCAGTTGCACCCCCAAATCCAGTTCACCGCTTCAACTTGGAAACCCAGTAACACTAGGAGAAGCCAAGTCCAAGTAGTCAAGGCAGAGCAGCAAAATGAAGCAGCCATTTCAAGAAGATCGTGCGCCAATATTCTCATCACTTGGCTGCCTGCTTTGACCCTCATTTCGGCGTCTCCGCCGTCGTCGGAGGCCAGAGAGAGACGCAACAGGAAAGTCATCCCTCTTGAGGACTACAGTACTACCCCAGCTGATGGATTGAAATATTATGATTTGGTTGAGGGAAAGGGTCCAGTAGCTGAGAAAGGATCAACAGTTCAGGTTCACTTTGATTGCCTATATCGTGGGATTACCGCTGTATCAAGCAGGGAATCTAAAATCTTGGCTGGAAATCGTATTATTGCCCAGCCATACGTCTTCAAAGTTGGCGCTACTCCAGGGAAGGAACGAAAGCGAGAGTTTGTGGACAACGCAAATGGTCTATTTTCTGCACAAGCTGCACCAAAACCCCCACGAGCAATGTACTCGGTAACTGAAGGGATGAAAGTAGGGGGGAAGCGAACTGTGATTGTTCCTCCAGAGGCTGGATATGGCCCAAAGGGCATGAATGAGATTCCTCCTGGAGCAACGTTTGAGCTAAATCTGGAGCTTTTGCAGCTGAATCCACCTTCAAGAGAGTGA

Protein Analysis

247

Amino Acids

26.99

Weight (kDa)

9.62

Isoelectric Point (pI)

50.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FKBP_C PF00254 121 - 239 8.5e-11 FKBP-type peptidyl-prolyl cis-trans isomerase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 7
AccB7I CCANNNNNTGG 2 cut(s) 317, 647
AciI CCGC 3 cut(s) 93, 242, 417
AclI AACGTT 1 cut(s) 692
AclWI GGATC 1 cut(s) 379
AcoI YGGCCR 1 cut(s) 39
AcuI CTGAAG 1 cut(s) 618
AcyI GRCGYC 1 cut(s) 236
AfaI GTAC 2 cut(s) 304, 587
AfiI CCNNNNNNNGG 4 cut(s) 232, 292, 317, 647
AgsI TTSAA 5 cut(s) 99, 177, 325, 484, 735
AjnI CCWGG 2 cut(s) 499, 682
AloI GAACNNNNNNTCC 2 cut(s) 363, 395
AluBI AGCT 6 cut(s) 314, 362, 560, 700, 712, 721
AluI AGCT 6 cut(s) 314, 362, 560, 700, 712, 721
Alw26I GTCTC 2 cut(s) 243, 259
AlwI GGATC 1 cut(s) 379
AlwNI CAGNNNCTG 3 cut(s) 17, 362, 647
AoxI GGCC 3 cut(s) 39, 255, 655
ApeKI GCWGC 5 cut(s) 154, 167, 211, 560, 718
ArsI GACNNNNNNTTYG 2 cut(s) 214, 246
AspLEI GCGC 2 cut(s) 191, 494
AspS9I GGNCC 2 cut(s) 353, 656
AsuHPI GGTGA 1 cut(s) 82
AvaII GGWCC 1 cut(s) 353
BaeI ACNNNNGTAYC 2 cut(s) 405, 438
BanI GGYRCC 1 cut(s) 7
BauI CACGAG 1 cut(s) 576
BbsI GAAGAC 1 cut(s) 472
BbvI GCAGC 5 cut(s) 166, 179, 198, 547, 730
BccI CCATC 1 cut(s) 311
BceAI ACGGC 2 cut(s) 54, 229
BcgI CGANNNNNNTGC 2 cut(s) 570, 604
BciT130I CCWGG 2 cut(s) 501, 684
BcoDI GTCTC 2 cut(s) 243, 259
BfaI CTAG 1 cut(s) 120
BfmI CTRYAG 1 cut(s) 298
BfoI RGCGCY 1 cut(s) 495
BglI GCCNNNNNGGC 1 cut(s) 663
BisI GCNGC 5 cut(s) 155, 168, 212, 561, 719
BlsI GCNGC 5 cut(s) 156, 169, 213, 562, 720
BmcAI AGTACT 1 cut(s) 304
Bme1390I CCNGG 2 cut(s) 501, 684
Bme18I GGWCC 1 cut(s) 353
BmgT120I GGNCC 2 cut(s) 353, 656
BmiI GGNNCC 2 cut(s) 9, 354
BmrFI CCNGG 2 cut(s) 501, 684
BmrI ACTGGG 1 cut(s) 105
BmsI GCATC 1 cut(s) 56
BmuI ACTGGG 1 cut(s) 105
BpiI GAAGAC 1 cut(s) 472
BpmI CTGGAG 4 cut(s) 483, 624, 705, 728
BpuEI CTTGAG 1 cut(s) 311
BsaHI GRCGYC 1 cut(s) 236
BsaJI CCNNGG 2 cut(s) 42, 500
Bsc4I CCNNNNNNNGG 4 cut(s) 232, 292, 317, 647
Bse1I ACTGG 3 cut(s) 85, 111, 356
Bse3DI GCAATG 1 cut(s) 588
BseBI CCWGG 2 cut(s) 501, 684
BseDI CCNNGG 2 cut(s) 42, 500
BseGI GGATG 2 cut(s) 282, 609
BseLI CCNNNNNNNGG 4 cut(s) 232, 292, 317, 647
BseMI GCAATG 1 cut(s) 588
BseMII CTCAG 1 cut(s) 354
BseNI ACTGG 3 cut(s) 85, 111, 356
BseXI GCAGC 5 cut(s) 166, 179, 198, 547, 730
BseYI CCCAGC 2 cut(s) 310, 468
BsgI GTGCAG 2 cut(s) 537, 546
BshFI GGCC 3 cut(s) 41, 257, 657
BshNI GGYRCC 1 cut(s) 7
BslI CCNNNNNNNGG 4 cut(s) 232, 292, 317, 647
BsmAI GTCTC 2 cut(s) 243, 259
BsmBI CGTCTC 2 cut(s) 243, 259
BsnI GGCC 3 cut(s) 41, 257, 657
Bsp143I GATC 2 cut(s) 182, 371
Bsp19I CCATGG 1 cut(s) 42
BspACI CCGC 3 cut(s) 93, 242, 417
BspANI GGCC 3 cut(s) 41, 257, 657
BspCNI CTCAG 1 cut(s) 355
BspLI GGNNCC 2 cut(s) 9, 354
BspPI GGATC 1 cut(s) 379
BspT107I GGYRCC 1 cut(s) 7
BsrDI GCAATG 1 cut(s) 588
BsrI ACTGG 3 cut(s) 85, 111, 356
BssECI CCNNGG 2 cut(s) 42, 500
BssMI GATC 2 cut(s) 182, 371
BssNI GRCGYC 1 cut(s) 236
BssSI CACGAG 1 cut(s) 576
BssT1I CCWWGG 1 cut(s) 42
Bst2BI CACGAG 1 cut(s) 576
Bst2UI CCWGG 2 cut(s) 501, 684
Bst4CI ACNGT 3 cut(s) 302, 379, 628
BstACI GRCGYC 1 cut(s) 236
BstAPI GCANNNNNTGC 1 cut(s) 560
BstC8I GCNNGC 2 cut(s) 65, 216
BstDEI CTNAG 1 cut(s) 363
BstDSI CCRYGG 1 cut(s) 42
BstF5I GGATG 2 cut(s) 282, 609
BstH2I RGCGCY 1 cut(s) 495
BstHHI GCGC 2 cut(s) 191, 494
BstKTI GATC 2 cut(s) 185, 374
BstMAI GTCTC 2 cut(s) 243, 259
BstMBI GATC 2 cut(s) 182, 371
BstMWI GCNNNNNNNGC 3 cut(s) 560, 663, 718
BstNI CCWGG 2 cut(s) 501, 684
BstSCI CCNGG 2 cut(s) 499, 682
BstSFI CTRYAG 1 cut(s) 298
BstV1I GCAGC 5 cut(s) 166, 179, 198, 547, 730
BstV2I GAAGAC 1 cut(s) 472
BsuRI GGCC 3 cut(s) 41, 257, 657
BtgI CCRYGG 1 cut(s) 42
BtsCI GGATG 2 cut(s) 282, 609
Cac8I GCNNGC 2 cut(s) 65, 216
CaiI CAGNNNCTG 3 cut(s) 17, 362, 647
CfoI GCGC 2 cut(s) 191, 494
Cfr13I GGNCC 2 cut(s) 353, 656
CseI GACGC 2 cut(s) 225, 276
Csp6I GTAC 2 cut(s) 303, 586
CviAII CATG 2 cut(s) 43, 667
CviQI GTAC 2 cut(s) 303, 586
DdeI CTNAG 1 cut(s) 363
DpnI GATC 2 cut(s) 184, 373
DpnII GATC 2 cut(s) 182, 371
EaeI YGGCCR 1 cut(s) 39
EciI GGCGGA 1 cut(s) 231
Eco130I CCWWGG 1 cut(s) 42
Eco47I GGWCC 1 cut(s) 353
Eco57I CTGAAG 1 cut(s) 618
EcoRII CCWGG 2 cut(s) 499, 682
EcoT14I CCWWGG 1 cut(s) 42
ErhI CCWWGG 1 cut(s) 42
Esp3I CGTCTC 2 cut(s) 243, 259
FaeI CATG 2 cut(s) 46, 670
FaiI YATR 6 cut(s) 44, 333, 403, 475, 654, 668
FatI CATG 2 cut(s) 42, 666
Fnu4HI GCNGC 5 cut(s) 155, 168, 212, 561, 719
FokI GGATG 2 cut(s) 269, 616
Fsp4HI GCNGC 5 cut(s) 155, 168, 212, 561, 719
FspBI CTAG 1 cut(s) 120
GlaI GCGC 2 cut(s) 190, 493
GluI GCNGC 5 cut(s) 155, 168, 212, 561, 719
GsaI CCCAGC 2 cut(s) 314, 472
GsuI CTGGAG 4 cut(s) 483, 624, 705, 728
HaeII RGCGCY 1 cut(s) 495
HaeIII GGCC 3 cut(s) 41, 257, 657
HgaI GACGC 2 cut(s) 225, 276
HhaI GCGC 2 cut(s) 191, 494
Hin1I GRCGYC 1 cut(s) 236
Hin1II CATG 2 cut(s) 46, 670
Hin6I GCGC 2 cut(s) 189, 492
HinP1I GCGC 2 cut(s) 189, 492
HinfI GANTC 4 cut(s) 14, 434, 676, 724
HphI GGTGA 1 cut(s) 82
Hpy166II GTNNAC 3 cut(s) 90, 388, 529
Hpy188I TCNGA 1 cut(s) 253
Hpy188III TCNNGA 5 cut(s) 177, 290, 641, 707, 735
Hpy8I GTNNAC 3 cut(s) 90, 388, 529
Hpy99I CGWCG 2 cut(s) 250, 253
HpyAV CCTTC 3 cut(s) 499, 593, 741
HpyCH4III ACNGT 3 cut(s) 302, 379, 628
HpyCH4IV ACGT 2 cut(s) 477, 692
HpyCH4V TGCA 5 cut(s) 67, 73, 554, 563, 718
HpyF10VI GCNNNNNNNGC 3 cut(s) 560, 663, 718
HpyF3I CTNAG 1 cut(s) 363
HpySE526I ACGT 2 cut(s) 477, 692
Hsp92I GRCGYC 1 cut(s) 236
Hsp92II CATG 2 cut(s) 46, 670
HspAI GCGC 2 cut(s) 189, 492
Kzo9I GATC 2 cut(s) 182, 371
LmnI GCTCC 2 cut(s) 686, 709
Lsp1109I GCAGC 5 cut(s) 166, 179, 198, 547, 730
LweI GCATC 1 cut(s) 56
MaeI CTAG 1 cut(s) 120
MaeII ACGT 2 cut(s) 477, 692
MaeIII GTNAC 3 cut(s) 19, 113, 592
MalI GATC 2 cut(s) 184, 373
MboI GATC 2 cut(s) 182, 371
MboII GAAGA 2 cut(s) 192, 472
MlyI GAGTC 1 cut(s) 23
MmeI TCCRAC 2 cut(s) 59, 231
MnlI CCTC 8 cut(s) 236, 247, 286, 297, 337, 637, 648, 690
MspA1I CMGCKG 3 cut(s) 314, 419, 721
MspR9I CCNGG 2 cut(s) 501, 684
MvaI CCWGG 2 cut(s) 501, 684
MwoI GCNNNNNNNGC 3 cut(s) 560, 663, 718
NcoI CCATGG 1 cut(s) 42
NdeII GATC 2 cut(s) 182, 371
NlaIII CATG 2 cut(s) 46, 670
NlaIV GGNNCC 2 cut(s) 9, 354
PfeI GAWTC 3 cut(s) 434, 676, 724
PflMI CCANNNNNTGG 2 cut(s) 317, 647
PfoI TCCNGGA 1 cut(s) 682
PkrI GCNGC 5 cut(s) 156, 169, 213, 562, 720
PleI GAGTC 1 cut(s) 22
PpsI GAGTC 1 cut(s) 22
Psp1406I AACGTT 1 cut(s) 692
Psp6I CCWGG 2 cut(s) 499, 682
PspFI CCCAGC 2 cut(s) 310, 468
PspGI CCWGG 2 cut(s) 499, 682
PspN4I GGNNCC 2 cut(s) 9, 354
PspPI GGNCC 2 cut(s) 353, 656
PstNI CAGNNNCTG 3 cut(s) 17, 362, 647
PvuII CAGCTG 2 cut(s) 314, 721
RsaI GTAC 2 cut(s) 304, 587
RsaNI GTAC 2 cut(s) 303, 586
SatI GCNGC 5 cut(s) 155, 168, 212, 561, 719
Sau3AI GATC 2 cut(s) 182, 371
Sau96I GGNCC 2 cut(s) 353, 656
ScaI AGTACT 1 cut(s) 304
SchI GAGTC 1 cut(s) 23
ScrFI CCNGG 2 cut(s) 501, 684
SfaNI GCATC 1 cut(s) 56
SfcI CTRYAG 1 cut(s) 298
SinI GGWCC 1 cut(s) 353
SmlI CTYRAG 1 cut(s) 290
SmoI CTYRAG 1 cut(s) 290
SsiI CCGC 3 cut(s) 93, 242, 417
SspI AATATT 2 cut(s) 196, 329
SspMI CTAG 1 cut(s) 120
StyD4I CCNGG 2 cut(s) 499, 682
StyI CCWWGG 1 cut(s) 42
TaaI ACNGT 3 cut(s) 302, 379, 628
TaiI ACGT 2 cut(s) 480, 695
TatI WGTACW 2 cut(s) 302, 585
TfiI GAWTC 3 cut(s) 434, 676, 724
TseI GCWGC 5 cut(s) 154, 167, 211, 560, 718
TspDTI ATGAA 3 cut(s) 177, 620, 683
Van91I CCANNNNNTGG 2 cut(s) 317, 647
VpaK11BI GGWCC 1 cut(s) 353
XspI CTAG 1 cut(s) 120
ZrmI AGTACT 1 cut(s) 304
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.