Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g04611 |
| malus_domestica | MD13G1221300.v1.1 MD13G1221400.v1.1 MD13G1221500.v1.1 |
| prunus_persica | Prupe.1G048200_v2.0.a1 |
| pyrus_communis | pycom13g19580 |
| rosa_chinensis | RchiOBHm_Chr4g0395381 |
| rosa_laevigata | RLG00000002110 RLG00000009627 |
| rosa_multiflora | Rmu_sc0002791.1_g000013 Rmu_sc0005834.1_g000011 Rmu_sc0010817.1_g000019 |
| rosa_roxburghii | Rroxscaffold_3G00237650 Rroxscaffold_5G00340340 |
| rosa_rugosa | Rorug03G0358000 |
| rosa_samantha | Rh4BG057900 Rh4CG063400 Rh4DG054500 Rh4DG085800 Rh7AG345000 Rh7CG362400 Rh7DG342600 |
| rosa_wichuraiana | Rw0G003280 Rw0G007680 Rw4G004740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 208 |
| AcsI | RAATTY | 2 cut(s) | 151, 232 |
| AcuI | CTGAAG | 1 cut(s) | 92 |
| AfaI | GTAC | 1 cut(s) | 322 |
| AgsI | TTSAA | 1 cut(s) | 312 |
| AluBI | AGCT | 3 cut(s) | 88, 194, 315 |
| AluI | AGCT | 3 cut(s) | 88, 194, 315 |
| ApeKI | GCWGC | 4 cut(s) | 77, 80, 92, 274 |
| ApoI | RAATTY | 2 cut(s) | 151, 232 |
| BbvI | GCAGC | 4 cut(s) | 64, 79, 92, 286 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 74, 108 |
| BciVI | GTATCC | 1 cut(s) | 105 |
| BfaI | CTAG | 2 cut(s) | 45, 213 |
| BfmI | CTRYAG | 1 cut(s) | 78 |
| BfuAI | ACCTGC | 1 cut(s) | 208 |
| BfuI | GTATCC | 1 cut(s) | 105 |
| BisI | GCNGC | 4 cut(s) | 78, 81, 93, 275 |
| BlsI | GCNGC | 4 cut(s) | 79, 82, 94, 276 |
| BmsI | GCATC | 2 cut(s) | 199, 247 |
| BseGI | GGATG | 1 cut(s) | 262 |
| BseXI | GCAGC | 4 cut(s) | 64, 79, 92, 286 |
| BseYI | CCCAGC | 1 cut(s) | 194 |
| BslFI | GGGAC | 1 cut(s) | 178 |
| BsmFI | GGGAC | 1 cut(s) | 178 |
| BsmI | GAATGC | 1 cut(s) | 307 |
| Bsp1407I | TGTACA | 1 cut(s) | 320 |
| BspMAI | CTGCAG | 1 cut(s) | 82 |
| BspMI | ACCTGC | 1 cut(s) | 208 |
| BsrGI | TGTACA | 1 cut(s) | 320 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 280 |
| BstAUI | TGTACA | 1 cut(s) | 320 |
| BstC8I | GCNNGC | 3 cut(s) | 90, 126, 272 |
| BstF5I | GGATG | 1 cut(s) | 262 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 89, 280 |
| BstNSI | RCATGY | 2 cut(s) | 52, 128 |
| BstSFI | CTRYAG | 1 cut(s) | 78 |
| BstV1I | GCAGC | 4 cut(s) | 64, 79, 92, 286 |
| BsuI | GTATCC | 1 cut(s) | 105 |
| BtsCI | GGATG | 1 cut(s) | 262 |
| BtsI | GCAGTG | 2 cut(s) | 110, 267 |
| BtsIMutI | CAGTG | 2 cut(s) | 110, 267 |
| BveI | ACCTGC | 1 cut(s) | 208 |
| Cac8I | GCNNGC | 3 cut(s) | 90, 126, 272 |
| Csp6I | GTAC | 1 cut(s) | 321 |
| CviAII | CATG | 4 cut(s) | 22, 49, 125, 267 |
| CviJI | RGCY | 7 cut(s) | 11, 77, 83, 88, 142, 194, 315 |
| CviKI_1 | RGCY | 7 cut(s) | 11, 77, 83, 88, 142, 194, 315 |
| CviQI | GTAC | 1 cut(s) | 321 |
| Eco57I | CTGAAG | 1 cut(s) | 92 |
| FaeI | CATG | 4 cut(s) | 25, 52, 128, 270 |
| FaqI | GGGAC | 1 cut(s) | 178 |
| FatI | CATG | 4 cut(s) | 21, 48, 124, 266 |
| FauNDI | CATATG | 1 cut(s) | 279 |
| Fnu4HI | GCNGC | 4 cut(s) | 78, 81, 93, 275 |
| FokI | GGATG | 1 cut(s) | 269 |
| Fsp4HI | GCNGC | 4 cut(s) | 78, 81, 93, 275 |
| FspBI | CTAG | 2 cut(s) | 45, 213 |
| GluI | GCNGC | 4 cut(s) | 78, 81, 93, 275 |
| GsaI | CCCAGC | 1 cut(s) | 198 |
| Hin1II | CATG | 4 cut(s) | 25, 52, 128, 270 |
| HindIII | AAGCTT | 1 cut(s) | 313 |
| Hpy188I | TCNGA | 1 cut(s) | 208 |
| HpyAV | CCTTC | 1 cut(s) | 67 |
| HpyCH4V | TGCA | 3 cut(s) | 80, 260, 283 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 89, 280 |
| Hsp92II | CATG | 4 cut(s) | 25, 52, 128, 270 |
| LmnI | GCTCC | 1 cut(s) | 100 |
| LpnPI | CCDG | 5 cut(s) | 180, 203, 224, 256, 309 |
| Lsp1109I | GCAGC | 4 cut(s) | 64, 79, 92, 286 |
| LweI | GCATC | 2 cut(s) | 199, 247 |
| MaeI | CTAG | 2 cut(s) | 45, 213 |
| MaeIII | GTNAC | 1 cut(s) | 133 |
| MluCI | AATT | 2 cut(s) | 151, 232 |
| MseI | TTAA | 1 cut(s) | 225 |
| Mva1269I | GAATGC | 1 cut(s) | 307 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 89, 280 |
| NdeI | CATATG | 1 cut(s) | 279 |
| NlaIII | CATG | 4 cut(s) | 25, 52, 128, 270 |
| NmeAIII | GCCGAG | 1 cut(s) | 109 |
| NmuCI | GTSAC | 1 cut(s) | 133 |
| NspI | RCATGY | 2 cut(s) | 52, 128 |
| PaeI | GCATGC | 1 cut(s) | 128 |
| PctI | GAATGC | 1 cut(s) | 307 |
| PkrI | GCNGC | 4 cut(s) | 79, 82, 94, 276 |
| PspFI | CCCAGC | 1 cut(s) | 194 |
| PstI | CTGCAG | 1 cut(s) | 82 |
| RsaI | GTAC | 1 cut(s) | 322 |
| RsaNI | GTAC | 1 cut(s) | 321 |
| SaqAI | TTAA | 1 cut(s) | 225 |
| SatI | GCNGC | 4 cut(s) | 78, 81, 93, 275 |
| SetI | ASST | 5 cut(s) | 90, 196, 222, 302, 317 |
| SfaNI | GCATC | 2 cut(s) | 199, 247 |
| SfcI | CTRYAG | 1 cut(s) | 78 |
| SphI | GCATGC | 1 cut(s) | 128 |
| Sse9I | AATT | 2 cut(s) | 151, 232 |
| SspMI | CTAG | 2 cut(s) | 45, 213 |
| TasI | AATT | 2 cut(s) | 151, 232 |
| TatI | WGTACW | 1 cut(s) | 320 |
| Tru1I | TTAA | 1 cut(s) | 225 |
| Tru9I | TTAA | 1 cut(s) | 225 |
| TscAI | CASTG | 2 cut(s) | 110, 267 |
| TseFI | GTSAC | 1 cut(s) | 133 |
| TseI | GCWGC | 4 cut(s) | 77, 80, 92, 274 |
| Tsp45I | GTSAC | 1 cut(s) | 133 |
| TspDTI | ATGAA | 1 cut(s) | 38 |
| TspRI | CASTG | 2 cut(s) | 110, 267 |
| XapI | RAATTY | 2 cut(s) | 151, 232 |
| XceI | RCATGY | 2 cut(s) | 52, 128 |
| XspI | CTAG | 2 cut(s) | 45, 213 |