Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g04611 |
| malus_domestica | MD13G1221300.v1.1 MD13G1221400.v1.1 MD13G1221500.v1.1 |
| prunus_persica | Prupe.1G048200_v2.0.a1 |
| pyrus_communis | pycom13g19580 |
| rosa_chinensis | RchiOBHm_Chr4g0395381 |
| rosa_laevigata | RLG00000002110 RLG00000009627 |
| rosa_multiflora | Rmu_sc0002791.1_g000013 Rmu_sc0005834.1_g000011 Rmu_sc0010817.1_g000019 |
| rosa_roxburghii | Rroxscaffold_3G00237650 Rroxscaffold_5G00340340 |
| rosa_rugosa | Rorug03G0358000 |
| rosa_samantha | Rh4BG057900 Rh4CG063400 Rh4DG054500 Rh4DG085800 Rh7AG345000 Rh7CG362400 Rh7DG342600 |
| rosa_wichuraiana | Rw0G003280 Rw0G007680 Rw4G004740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 265 |
| AciI | CCGC | 1 cut(s) | 317 |
| AcsI | RAATTY | 3 cut(s) | 208, 289, 304 |
| AcuI | CTGAAG | 1 cut(s) | 149 |
| AluBI | AGCT | 2 cut(s) | 145, 251 |
| AluI | AGCT | 2 cut(s) | 145, 251 |
| Ama87I | CYCGRG | 1 cut(s) | 45 |
| ApeKI | GCWGC | 4 cut(s) | 134, 137, 149, 331 |
| ApoI | RAATTY | 3 cut(s) | 208, 289, 304 |
| AspLEI | GCGC | 1 cut(s) | 39 |
| AvaI | CYCGRG | 1 cut(s) | 45 |
| BbvI | GCAGC | 3 cut(s) | 121, 136, 149 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 131, 165 |
| BciVI | GTATCC | 1 cut(s) | 162 |
| BfaI | CTAG | 2 cut(s) | 102, 270 |
| BfmI | CTRYAG | 1 cut(s) | 135 |
| BfuAI | ACCTGC | 1 cut(s) | 265 |
| BfuI | GTATCC | 1 cut(s) | 162 |
| BisI | GCNGC | 4 cut(s) | 135, 138, 150, 332 |
| BlsI | GCNGC | 4 cut(s) | 136, 139, 151, 333 |
| BmeT110I | CYCGRG | 1 cut(s) | 45 |
| BmsI | GCATC | 3 cut(s) | 48, 256, 304 |
| BseGI | GGATG | 1 cut(s) | 319 |
| BseXI | GCAGC | 3 cut(s) | 121, 136, 149 |
| BseYI | CCCAGC | 1 cut(s) | 251 |
| BsiHKCI | CYCGRG | 1 cut(s) | 45 |
| BslFI | GGGAC | 1 cut(s) | 235 |
| BsmFI | GGGAC | 1 cut(s) | 235 |
| BsoBI | CYCGRG | 1 cut(s) | 45 |
| BspACI | CCGC | 1 cut(s) | 317 |
| BspMAI | CTGCAG | 1 cut(s) | 139 |
| BspMI | ACCTGC | 1 cut(s) | 265 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 337 |
| BstC8I | GCNNGC | 2 cut(s) | 147, 329 |
| BstF5I | GGATG | 1 cut(s) | 319 |
| BstHHI | GCGC | 1 cut(s) | 39 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 146, 337 |
| BstNSI | RCATGY | 3 cut(s) | 109, 185, 338 |
| BstSFI | CTRYAG | 1 cut(s) | 135 |
| BstV1I | GCAGC | 3 cut(s) | 121, 136, 149 |
| BsuI | GTATCC | 1 cut(s) | 162 |
| BtsCI | GGATG | 1 cut(s) | 319 |
| BtsI | GCAGTG | 1 cut(s) | 167 |
| BtsIMutI | CAGTG | 1 cut(s) | 167 |
| BveI | ACCTGC | 1 cut(s) | 265 |
| Cac8I | GCNNGC | 2 cut(s) | 147, 329 |
| CfoI | GCGC | 1 cut(s) | 39 |
| CseI | GACGC | 1 cut(s) | 50 |
| CviAII | CATG | 5 cut(s) | 79, 106, 182, 324, 335 |
| CviJI | RGCY | 7 cut(s) | 51, 68, 134, 140, 145, 199, 251 |
| CviKI_1 | RGCY | 7 cut(s) | 51, 68, 134, 140, 145, 199, 251 |
| Eco57I | CTGAAG | 1 cut(s) | 149 |
| Eco88I | CYCGRG | 1 cut(s) | 45 |
| FaeI | CATG | 5 cut(s) | 82, 109, 185, 327, 338 |
| FaqI | GGGAC | 1 cut(s) | 235 |
| FatI | CATG | 5 cut(s) | 78, 105, 181, 323, 334 |
| Fnu4HI | GCNGC | 4 cut(s) | 135, 138, 150, 332 |
| FokI | GGATG | 1 cut(s) | 326 |
| Fsp4HI | GCNGC | 4 cut(s) | 135, 138, 150, 332 |
| FspBI | CTAG | 2 cut(s) | 102, 270 |
| GlaI | GCGC | 1 cut(s) | 38 |
| GluI | GCNGC | 4 cut(s) | 135, 138, 150, 332 |
| GsaI | CCCAGC | 1 cut(s) | 255 |
| HgaI | GACGC | 1 cut(s) | 50 |
| HhaI | GCGC | 1 cut(s) | 39 |
| Hin1II | CATG | 5 cut(s) | 82, 109, 185, 327, 338 |
| Hin6I | GCGC | 1 cut(s) | 37 |
| HinP1I | GCGC | 1 cut(s) | 37 |
| Hpy188I | TCNGA | 1 cut(s) | 265 |
| HpyAV | CCTTC | 1 cut(s) | 124 |
| HpyCH4V | TGCA | 2 cut(s) | 137, 179 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 146, 337 |
| Hsp92II | CATG | 5 cut(s) | 82, 109, 185, 327, 338 |
| HspAI | GCGC | 1 cut(s) | 37 |
| LmnI | GCTCC | 1 cut(s) | 157 |
| LpnPI | CCDG | 5 cut(s) | 50, 237, 260, 281, 313 |
| Lsp1109I | GCAGC | 3 cut(s) | 121, 136, 149 |
| LweI | GCATC | 3 cut(s) | 48, 256, 304 |
| MaeI | CTAG | 2 cut(s) | 102, 270 |
| MaeIII | GTNAC | 1 cut(s) | 190 |
| MluCI | AATT | 3 cut(s) | 208, 289, 304 |
| MnlI | CCTC | 2 cut(s) | 12, 41 |
| MseI | TTAA | 1 cut(s) | 282 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 146, 337 |
| NlaIII | CATG | 5 cut(s) | 82, 109, 185, 327, 338 |
| NmeAIII | GCCGAG | 1 cut(s) | 166 |
| NmuCI | GTSAC | 1 cut(s) | 190 |
| NspI | RCATGY | 3 cut(s) | 109, 185, 338 |
| PaeR7I | CTCGAG | 1 cut(s) | 45 |
| PkrI | GCNGC | 4 cut(s) | 136, 139, 151, 333 |
| PspFI | CCCAGC | 1 cut(s) | 251 |
| PspXI | VCTCGAGB | 1 cut(s) | 45 |
| PstI | CTGCAG | 1 cut(s) | 139 |
| SaqAI | TTAA | 1 cut(s) | 282 |
| SatI | GCNGC | 4 cut(s) | 135, 138, 150, 332 |
| SetI | ASST | 4 cut(s) | 23, 147, 253, 279 |
| SfaNI | GCATC | 3 cut(s) | 48, 256, 304 |
| SfcI | CTRYAG | 1 cut(s) | 135 |
| Sfr274I | CTCGAG | 1 cut(s) | 45 |
| SlaI | CTCGAG | 1 cut(s) | 45 |
| SmlI | CTYRAG | 1 cut(s) | 45 |
| SmoI | CTYRAG | 1 cut(s) | 45 |
| Sse9I | AATT | 3 cut(s) | 208, 289, 304 |
| SsiI | CCGC | 1 cut(s) | 317 |
| SspMI | CTAG | 2 cut(s) | 102, 270 |
| TaqI | TCGA | 1 cut(s) | 46 |
| TasI | AATT | 3 cut(s) | 208, 289, 304 |
| Tru1I | TTAA | 1 cut(s) | 282 |
| Tru9I | TTAA | 1 cut(s) | 282 |
| TscAI | CASTG | 1 cut(s) | 167 |
| TseFI | GTSAC | 1 cut(s) | 190 |
| TseI | GCWGC | 4 cut(s) | 134, 137, 149, 331 |
| Tsp45I | GTSAC | 1 cut(s) | 190 |
| TspDTI | ATGAA | 1 cut(s) | 95 |
| TspRI | CASTG | 1 cut(s) | 167 |
| XapI | RAATTY | 3 cut(s) | 208, 289, 304 |
| XceI | RCATGY | 3 cut(s) | 109, 185, 338 |
| XhoI | CTCGAG | 1 cut(s) | 45 |
| XspI | CTAG | 2 cut(s) | 102, 270 |