Structural maintenance of chromosomes protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0113531 RchiOBHm_Chr2g0171981 RchiOBHm_Chr2g0172081 RchiOBHm_Chr6g0290101 |
| rosa_laevigata | RLG00000001897 |
| rosa_roxburghii | Rroxscaffold_1G00002340 |
| rosa_samantha | Rh2AG413300 Rh4CG190800 Rh6AG366900 Rh6BG077100 Rh6CG333400 Rh7AG247600 Rh7CG388400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 44 |
| AclWI | GGATC | 1 cut(s) | 216 |
| AcoI | YGGCCR | 2 cut(s) | 33, 61 |
| AcsI | RAATTY | 1 cut(s) | 317 |
| AgsI | TTSAA | 3 cut(s) | 133, 189, 205 |
| AjnI | CCWGG | 1 cut(s) | 58 |
| AluBI | AGCT | 1 cut(s) | 185 |
| AluI | AGCT | 1 cut(s) | 185 |
| Alw26I | GTCTC | 1 cut(s) | 82 |
| AlwI | GGATC | 1 cut(s) | 216 |
| AoxI | GGCC | 3 cut(s) | 33, 56, 61 |
| ApoI | RAATTY | 1 cut(s) | 317 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 99 |
| AspLEI | GCGC | 1 cut(s) | 171 |
| BalI | TGGCCA | 1 cut(s) | 63 |
| BccI | CCATC | 2 cut(s) | 266, 281 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 284, 318 |
| BciT130I | CCWGG | 1 cut(s) | 60 |
| BcoDI | GTCTC | 1 cut(s) | 82 |
| Bme1390I | CCNGG | 1 cut(s) | 60 |
| BmrFI | CCNGG | 1 cut(s) | 60 |
| BmrI | ACTGGG | 1 cut(s) | 301 |
| BmsI | GCATC | 1 cut(s) | 115 |
| BmuI | ACTGGG | 1 cut(s) | 301 |
| BpmI | CTGGAG | 1 cut(s) | 201 |
| Bse1I | ACTGG | 1 cut(s) | 307 |
| BseBI | CCWGG | 1 cut(s) | 60 |
| BseGI | GGATG | 3 cut(s) | 84, 130, 157 |
| BseNI | ACTGG | 1 cut(s) | 307 |
| BseX3I | CGGCCG | 1 cut(s) | 33 |
| BseYI | CCCAGC | 1 cut(s) | 219 |
| Bsh1285I | CGRYCG | 1 cut(s) | 36 |
| BshFI | GGCC | 3 cut(s) | 35, 58, 63 |
| BsiEI | CGRYCG | 1 cut(s) | 36 |
| BsmAI | GTCTC | 1 cut(s) | 82 |
| BsnI | GGCC | 3 cut(s) | 35, 58, 63 |
| Bsp143I | GATC | 2 cut(s) | 66, 208 |
| BspANI | GGCC | 3 cut(s) | 35, 58, 63 |
| BspPI | GGATC | 1 cut(s) | 216 |
| BsrI | ACTGG | 1 cut(s) | 307 |
| BssMI | GATC | 2 cut(s) | 66, 208 |
| Bst2UI | CCWGG | 1 cut(s) | 60 |
| Bst4CI | ACNGT | 2 cut(s) | 18, 199 |
| Bst6I | CTCTTC | 2 cut(s) | 67, 271 |
| BstF5I | GGATG | 3 cut(s) | 84, 130, 157 |
| BstHHI | GCGC | 1 cut(s) | 171 |
| BstKTI | GATC | 2 cut(s) | 69, 211 |
| BstMAI | GTCTC | 1 cut(s) | 82 |
| BstMBI | GATC | 2 cut(s) | 66, 208 |
| BstMCI | CGRYCG | 1 cut(s) | 36 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 191, 245, 254, 311 |
| BstNI | CCWGG | 1 cut(s) | 60 |
| BstSCI | CCNGG | 1 cut(s) | 58 |
| BstZI | CGGCCG | 1 cut(s) | 33 |
| BsuRI | GGCC | 3 cut(s) | 35, 58, 63 |
| BtsCI | GGATG | 3 cut(s) | 84, 130, 157 |
| BtsIMutI | CAGTG | 1 cut(s) | 195 |
| CfoI | GCGC | 1 cut(s) | 171 |
| CseI | GACGC | 1 cut(s) | 47 |
| CviJI | RGCY | 7 cut(s) | 35, 58, 63, 136, 185, 219, 268 |
| CviKI_1 | RGCY | 7 cut(s) | 35, 58, 63, 136, 185, 219, 268 |
| DpnI | GATC | 2 cut(s) | 68, 210 |
| DpnII | GATC | 2 cut(s) | 66, 208 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 44 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 44 |
| EaeI | YGGCCR | 2 cut(s) | 33, 61 |
| EagI | CGGCCG | 1 cut(s) | 33 |
| Eam1104I | CTCTTC | 2 cut(s) | 67, 271 |
| EarI | CTCTTC | 2 cut(s) | 67, 271 |
| EclXI | CGGCCG | 1 cut(s) | 33 |
| Eco147I | AGGCCT | 1 cut(s) | 58 |
| Eco52I | CGGCCG | 1 cut(s) | 33 |
| EcoRII | CCWGG | 1 cut(s) | 58 |
| FaiI | YATR | 5 cut(s) | 54, 147, 164, 229, 237 |
| FokI | GGATG | 3 cut(s) | 71, 137, 164 |
| GlaI | GCGC | 1 cut(s) | 170 |
| GsaI | CCCAGC | 1 cut(s) | 223 |
| GsuI | CTGGAG | 1 cut(s) | 201 |
| HaeIII | GGCC | 3 cut(s) | 35, 58, 63 |
| HgaI | GACGC | 1 cut(s) | 47 |
| HhaI | GCGC | 1 cut(s) | 171 |
| Hin6I | GCGC | 1 cut(s) | 169 |
| HinP1I | GCGC | 1 cut(s) | 169 |
| HincII | GTYRAC | 2 cut(s) | 12, 21 |
| HindII | GTYRAC | 2 cut(s) | 12, 21 |
| HinfI | GANTC | 2 cut(s) | 75, 112 |
| Hpy166II | GTNNAC | 2 cut(s) | 12, 21 |
| Hpy188I | TCNGA | 1 cut(s) | 71 |
| Hpy188III | TCNNGA | 1 cut(s) | 180 |
| Hpy8I | GTNNAC | 2 cut(s) | 12, 21 |
| Hpy99I | CGWCG | 1 cut(s) | 41 |
| HpyAV | CCTTC | 1 cut(s) | 199 |
| HpyCH4III | ACNGT | 2 cut(s) | 18, 199 |
| HpyCH4V | TGCA | 2 cut(s) | 239, 314 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 191, 245, 254, 311 |
| HspAI | GCGC | 1 cut(s) | 169 |
| Kzo9I | GATC | 2 cut(s) | 66, 208 |
| LmnI | GCTCC | 1 cut(s) | 182 |
| LpnPI | CCDG | 7 cut(s) | 45, 72, 77, 150, 165, 205, 320 |
| LweI | GCATC | 1 cut(s) | 115 |
| MalI | GATC | 2 cut(s) | 68, 210 |
| MboI | GATC | 2 cut(s) | 66, 208 |
| MboII | GAAGA | 3 cut(s) | 84, 92, 288 |
| MlsI | TGGCCA | 1 cut(s) | 63 |
| MluCI | AATT | 1 cut(s) | 317 |
| MluNI | TGGCCA | 1 cut(s) | 63 |
| MlyI | GAGTC | 1 cut(s) | 84 |
| MnlI | CCTC | 2 cut(s) | 115, 238 |
| Mox20I | TGGCCA | 1 cut(s) | 63 |
| MroXI | GAANNNNTTC | 1 cut(s) | 99 |
| MscI | TGGCCA | 1 cut(s) | 63 |
| Msp20I | TGGCCA | 1 cut(s) | 63 |
| MspR9I | CCNGG | 1 cut(s) | 60 |
| MvaI | CCWGG | 1 cut(s) | 60 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 191, 245, 254, 311 |
| NdeII | GATC | 2 cut(s) | 66, 208 |
| NmeAIII | GCCGAG | 1 cut(s) | 11 |
| PceI | AGGCCT | 1 cut(s) | 58 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 14, 45 |
| PdmI | GAANNNNTTC | 1 cut(s) | 99 |
| PfeI | GAWTC | 1 cut(s) | 112 |
| PleI | GAGTC | 1 cut(s) | 83 |
| PpsI | GAGTC | 1 cut(s) | 83 |
| Psp6I | CCWGG | 1 cut(s) | 58 |
| PspFI | CCCAGC | 1 cut(s) | 219 |
| PspGI | CCWGG | 1 cut(s) | 58 |
| Sau3AI | GATC | 2 cut(s) | 66, 208 |
| SchI | GAGTC | 1 cut(s) | 84 |
| ScrFI | CCNGG | 1 cut(s) | 60 |
| SetI | ASST | 1 cut(s) | 187 |
| SfaNI | GCATC | 1 cut(s) | 115 |
| Sse9I | AATT | 1 cut(s) | 317 |
| SseBI | AGGCCT | 1 cut(s) | 58 |
| StuI | AGGCCT | 1 cut(s) | 58 |
| StyD4I | CCNGG | 1 cut(s) | 58 |
| TaaI | ACNGT | 2 cut(s) | 18, 199 |
| TaqI | TCGA | 1 cut(s) | 48 |
| TasI | AATT | 1 cut(s) | 317 |
| TfiI | GAWTC | 1 cut(s) | 112 |
| TscAI | CASTG | 1 cut(s) | 202 |
| TspDTI | ATGAA | 1 cut(s) | 108 |
| TspRI | CASTG | 1 cut(s) | 202 |
| XapI | RAATTY | 1 cut(s) | 317 |
| XmnI | GAANNNNTTC | 1 cut(s) | 99 |