Rh7CG422700

GDP-fucose protein O-fucosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0004811
Physical Location & Seq
Reverse (-)
54646123 .. 54654429
8307 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG422700.1

Sequence Viewer

Length: 1386 bp
ATGCACGGCTACAGCCGCCTCGGCATGCCCCGCGGCGGCGGCGGCTCCGTTACCGCCTCGCCGCCGTCCTCGCCGCGGTGCCGCCACGGCCGGAGCAAGAACTCCTCCGGCGGCGGCGGCCGCGGCCCCAAGCAGCAGAGCATTGCGGAGAGGGCGGTGTTTTTTATCATCTCGGTGGTGTTTAGAAGACGAGGCATGCTTTTATTCGCGCCTCTGTTGTATATTTCCGGAATGTTGTTGTATATGGGCTCTGTGAGCTTCGATGTAGTTAGCTTGAAGAACGTTGTGATTATCAGTAAGCCGTCGCCGCCGGGATCACTGTACAGGAGCCCTCAGGTTTTTCAGAAGCTCTGGCCTTATATGCAGGCCGAGAGTAATCACACTCCCAATTTGTTGATGACAGTGTGGAACTCAAATGTGCATAAAGTTTGGAAGCCTTGTATTCCCCAAGATACTCCGAAAGCAGAATTACCAAAGTCAAATGGTCTATTCATAATTGAAGCGAACGGTGGGTTGAACCAGCAACGGCTGTCGATATGTGATGCAGTTGCTGTGGCTGGACTCCTAAATGCAACTCTTCTGATTCCAATCTTTCATCTAAATAGTGTTTGGAGAGACTCAAGTCACTTTGGGAACATATTTGATGAAGATTTCTTCATCCATGCTCTCAGAAATCACGTTAATGTGGTCAGGGAACTTCCAGAAGATATACTTCAGCGGTTTGACAATAATATAAGCAACATTGTGAATTTGAGAGTGAAAGGTTGGTCAAGTTCAGCTCACTATCTCCGTAAGGTCCTCCCGAAGTTAGAGGAGATGGGGGCTGTGCGCATTGCACCTTTCTCAAACAGATTGGCTCATGCAGTTCCTTCAAACATCCAGAGCCTTAGATGCTTTGCCAATTTTGAAGCACTGAGGTTCTCAAATTCAATAAGACTGCTTGCAGATAAAATGGTTGATCGAATGGTCAAAAGTAGCTCCCACAGTGAAGGCAAATATGTTTCAGTACATCTTCGCTTTGAAGAGGACATGGTTGCGTTTTCATGCTGTGAATATGATGGTGGGGAGGAAGAGAAACATGAAATGGATATTGCTCGAGAAAGAAGCTGGAGAGGAAAATTCAGGAGAAGGGGTAGAGTAATTAGGCCAGGTGCAAATCGTGTTGATGGGAAATGCCCTTTAACGCCATTAGAGGTAGGAATGATGCTCAGGGGCATGGGATTTGATAATACCACCTCAGTATACATTGCAGCAGGTAAAATTTATAAAGCAGAAAAGTACATGGCTCCACTTAAACAGATGTTTCCACACTTGCAAATGAAAGACACACTGGCTACTTCAGAAGAACTTGCTCCTTTTAAGGTACCATTTGAGTCACGGGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
O-FucT

Protein Analysis

461

Amino Acids

51.78

Weight (kDa)

9.71

Isoelectric Point (pI)

58.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
O-FucT PF10250 166 - 454 3.4e-83 GDP-fucose protein O-fucosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1266
Acc16I TGCGCA 1 cut(s) 830
Acc36I ACCTGC 1 cut(s) 1244
Acc65I GGTACC 1 cut(s) 1363
AccB1I GGYRCC 2 cut(s) 78, 1363
AccI GTMKAC 1 cut(s) 1242
AccII CGCG 4 cut(s) 33, 76, 123, 209
AccIII TCCGGA 1 cut(s) 227
AclI AACGTT 1 cut(s) 282
AclWI GGATC 1 cut(s) 322
AcoI YGGCCR 2 cut(s) 88, 118
AcsI RAATTY 4 cut(s) 748, 925, 1118, 1260
AcuI CTGAAG 2 cut(s) 698, 1323
AfaI GTAC 4 cut(s) 323, 1008, 1280, 1365
AfiI CCNNNNNNNGG 2 cut(s) 35, 75
AgsI TTSAA 7 cut(s) 277, 500, 517, 873, 908, 930, 1022
AjnI CCWGG 1 cut(s) 1147
AluBI AGCT 6 cut(s) 258, 273, 349, 779, 978, 1107
AluI AGCT 6 cut(s) 258, 273, 349, 779, 978, 1107
Alw26I GTCTC 1 cut(s) 609
AlwI GGATC 1 cut(s) 322
AlwNI CAGNNNCTG 1 cut(s) 551
Ama87I CYCGRG 1 cut(s) 1095
Aor13HI TCCGGA 1 cut(s) 227
AoxI GGCC 6 cut(s) 88, 118, 124, 353, 366, 1145
ApeKI GCWGC 2 cut(s) 133, 1250
ApoI RAATTY 4 cut(s) 748, 925, 1118, 1260
Asp718I GGTACC 1 cut(s) 1363
AspLEI GCGC 2 cut(s) 211, 831
AspS9I GGNCC 2 cut(s) 125, 796
AsuC2I CCSGG 1 cut(s) 312
AvaI CYCGRG 1 cut(s) 1095
AvaII GGWCC 1 cut(s) 796
AxyI CCTNAGG 1 cut(s) 333
BanI GGYRCC 2 cut(s) 78, 1363
BanII GRGCYC 2 cut(s) 251, 332
BbsI GAAGAC 1 cut(s) 193
BbvI GCAGC 2 cut(s) 145, 1262
BccI CCATC 3 cut(s) 811, 1052, 1160
BceAI ACGGC 5 cut(s) 22, 49, 103, 286, 542
BciT130I CCWGG 1 cut(s) 1149
BcnI CCSGG 1 cut(s) 312
BcoDI GTCTC 1 cut(s) 609
BfmI CTRYAG 1 cut(s) 10
BfuAI ACCTGC 1 cut(s) 1244
BglI GCCNNNNNGGC 2 cut(s) 21, 87
Bme1390I CCNGG 2 cut(s) 312, 1149
Bme18I GGWCC 1 cut(s) 796
BmeT110I CYCGRG 1 cut(s) 1095
BmgT120I GGNCC 2 cut(s) 125, 796
BmiI GGNNCC 6 cut(s) 46, 80, 127, 329, 1287, 1365
BmrFI CCNGG 2 cut(s) 312, 1149
BmsI GCATC 3 cut(s) 532, 881, 1194
BoxI GACNNNNGTC 1 cut(s) 621
BpiI GAAGAC 1 cut(s) 193
BpmI CTGGAG 1 cut(s) 1129
Bpu10I CCTNAGC 1 cut(s) 1208
BpuEI CTTGAG 1 cut(s) 604
BpuMI CCSGG 1 cut(s) 312
BsaBI GATNNNNATC 1 cut(s) 587
BsaJI CCNNGG 5 cut(s) 19, 31, 74, 85, 121
BsaWI WCCGGW 1 cut(s) 227
BsaXI ACNNNNNCTCC 2 cut(s) 1117, 1147
Bsc4I CCNNNNNNNGG 2 cut(s) 35, 75
Bse1I ACTGG 1 cut(s) 1335
Bse21I CCTNAGG 1 cut(s) 333
Bse3DI GCAATG 3 cut(s) 141, 831, 1245
Bse8I GATNNNNATC 1 cut(s) 587
BseAI TCCGGA 1 cut(s) 227
BseBI CCWGG 1 cut(s) 1149
BseDI CCNNGG 5 cut(s) 19, 31, 74, 85, 121
BseGI GGATG 2 cut(s) 657, 876
BseJI GATNNNNATC 1 cut(s) 587
BseLI CCNNNNNNNGG 2 cut(s) 35, 75
BseMI GCAATG 3 cut(s) 141, 831, 1245
BseMII CTCAG 5 cut(s) 347, 682, 905, 1222, 1251
BseNI ACTGG 1 cut(s) 1335
BseRI GAGGAG 2 cut(s) 94, 827
BseX3I CGGCCG 2 cut(s) 88, 118
BseXI GCAGC 2 cut(s) 145, 1262
Bsh1236I CGCG 4 cut(s) 33, 76, 123, 209
Bsh1285I CGRYCG 2 cut(s) 91, 121
BshFI GGCC 6 cut(s) 90, 120, 126, 355, 368, 1147
BshNI GGYRCC 2 cut(s) 78, 1363
BsiEI CGRYCG 2 cut(s) 91, 121
BsiHKCI CYCGRG 1 cut(s) 1095
BsiSI CCGG 4 cut(s) 91, 108, 228, 311
BslI CCNNNNNNNGG 2 cut(s) 35, 75
BsmAI GTCTC 1 cut(s) 609
BsnI GGCC 6 cut(s) 90, 120, 126, 355, 368, 1147
BsoBI CYCGRG 1 cut(s) 1095
Bsp1286I GDGCHC 2 cut(s) 251, 332
Bsp13I TCCGGA 1 cut(s) 227
Bsp1407I TGTACA 1 cut(s) 321
Bsp143I GATC 2 cut(s) 314, 958
BspANI GGCC 6 cut(s) 90, 120, 126, 355, 368, 1147
BspCNI CTCAG 5 cut(s) 346, 681, 906, 1221, 1250
BspEI TCCGGA 1 cut(s) 227
BspFNI CGCG 4 cut(s) 33, 76, 123, 209
BspLI GGNNCC 6 cut(s) 46, 80, 127, 329, 1287, 1365
BspMI ACCTGC 1 cut(s) 1244
BspPI GGATC 1 cut(s) 322
BspT107I GGYRCC 2 cut(s) 78, 1363
BsrDI GCAATG 3 cut(s) 141, 831, 1245
BsrGI TGTACA 1 cut(s) 321
BsrI ACTGG 1 cut(s) 1335
BssECI CCNNGG 5 cut(s) 19, 31, 74, 85, 121
BssMI GATC 2 cut(s) 314, 958
BssNAI GTATAC 1 cut(s) 1243
Bst1107I GTATAC 1 cut(s) 1243
Bst2UI CCWGG 1 cut(s) 1149
Bst4CI ACNGT 4 cut(s) 321, 403, 509, 986
Bst6I CTCTTC 3 cut(s) 582, 1017, 1065
BstAUI TGTACA 1 cut(s) 321
BstC8I GCNNGC 4 cut(s) 26, 197, 366, 942
BstDEI CTNAG 6 cut(s) 333, 668, 887, 914, 1208, 1237
BstDSI CCRYGG 4 cut(s) 31, 74, 85, 121
BstF5I GGATG 2 cut(s) 657, 876
BstFNI CGCG 4 cut(s) 33, 76, 123, 209
BstHHI GCGC 2 cut(s) 211, 831
BstKTI GATC 2 cut(s) 317, 961
BstMAI GTCTC 1 cut(s) 609
BstMBI GATC 2 cut(s) 314, 958
BstMCI CGRYCG 2 cut(s) 91, 121
BstNI CCWGG 1 cut(s) 1149
BstNSI RCATGY 2 cut(s) 28, 199
BstPAI GACNNNNGTC 1 cut(s) 621
BstSCI CCNGG 2 cut(s) 310, 1147
BstSFI CTRYAG 1 cut(s) 10
BstUI CGCG 4 cut(s) 33, 76, 123, 209
BstV1I GCAGC 2 cut(s) 145, 1262
BstV2I GAAGAC 1 cut(s) 193
BstZ17I GTATAC 1 cut(s) 1243
BstZI CGGCCG 2 cut(s) 88, 118
Bsu36I CCTNAGG 1 cut(s) 333
BsuRI GGCC 6 cut(s) 90, 120, 126, 355, 368, 1147
BtgI CCRYGG 4 cut(s) 31, 74, 85, 121
BtsCI GGATG 2 cut(s) 657, 876
BtsIMutI CAGTG 5 cut(s) 317, 408, 911, 991, 1328
BveI ACCTGC 1 cut(s) 1244
Cac8I GCNNGC 4 cut(s) 26, 197, 366, 942
CaiI CAGNNNCTG 1 cut(s) 551
CciNI GCGGCCGC 1 cut(s) 118
CfoI GCGC 2 cut(s) 211, 831
Cfr13I GGNCC 2 cut(s) 125, 796
Cfr42I CCGCGG 3 cut(s) 34, 77, 124
Csp6I GTAC 4 cut(s) 322, 1007, 1279, 1364
CviAII CATG 9 cut(s) 25, 196, 662, 860, 1030, 1044, 1079, 1216, 1282
CviQI GTAC 4 cut(s) 322, 1007, 1279, 1364
DdeI CTNAG 6 cut(s) 333, 668, 887, 914, 1208, 1237
DpnI GATC 2 cut(s) 316, 960
DpnII GATC 2 cut(s) 314, 958
EaeI YGGCCR 2 cut(s) 88, 118
EagI CGGCCG 2 cut(s) 88, 118
Eam1104I CTCTTC 3 cut(s) 582, 1017, 1065
EarI CTCTTC 3 cut(s) 582, 1017, 1065
EclXI CGGCCG 2 cut(s) 88, 118
Eco24I GRGCYC 2 cut(s) 251, 332
Eco47I GGWCC 1 cut(s) 796
Eco52I CGGCCG 2 cut(s) 88, 118
Eco57I CTGAAG 2 cut(s) 698, 1323
Eco81I CCTNAGG 1 cut(s) 333
Eco88I CYCGRG 1 cut(s) 1095
EcoO109I RGGNCCY 1 cut(s) 796
EcoRII CCWGG 1 cut(s) 1147
EcoT38I GRGCYC 2 cut(s) 251, 332
FaeI CATG 9 cut(s) 28, 199, 665, 863, 1033, 1047, 1082, 1219, 1285
FalI AAGNNNNNCTT 2 cut(s) 696, 728
FatI CATG 9 cut(s) 24, 195, 661, 859, 1029, 1043, 1078, 1215, 1281
FauI CCCGC 1 cut(s) 38
FblI GTMKAC 1 cut(s) 1242
FokI GGATG 2 cut(s) 644, 863
FriOI GRGCYC 2 cut(s) 251, 332
FspAI RTGCGCAY 1 cut(s) 830
FspI TGCGCA 1 cut(s) 830
GlaI GCGC 2 cut(s) 210, 830
GsuI CTGGAG 1 cut(s) 1129
HaeIII GGCC 6 cut(s) 90, 120, 126, 355, 368, 1147
HapII CCGG 4 cut(s) 91, 108, 228, 311
HhaI GCGC 2 cut(s) 211, 831
Hin1II CATG 9 cut(s) 28, 199, 665, 863, 1033, 1047, 1082, 1219, 1285
Hin6I GCGC 2 cut(s) 209, 829
HinP1I GCGC 2 cut(s) 209, 829
HinfI GANTC 4 cut(s) 561, 583, 617, 1373
HpaII CCGG 4 cut(s) 91, 108, 228, 311
Hpy166II GTNNAC 1 cut(s) 1243
Hpy188I TCNGA 5 cut(s) 345, 459, 582, 671, 1342
Hpy188III TCNNGA 6 cut(s) 228, 701, 802, 880, 1097, 1123
Hpy8I GTNNAC 1 cut(s) 1243
Hpy99I CGWCG 1 cut(s) 307
HpyAV CCTTC 3 cut(s) 879, 983, 1122
HpyCH4III ACNGT 4 cut(s) 321, 403, 509, 986
HpyCH4IV ACGT 2 cut(s) 282, 678
HpyF3I CTNAG 6 cut(s) 333, 668, 887, 914, 1208, 1237
HpySE526I ACGT 2 cut(s) 282, 678
Hsp92II CATG 9 cut(s) 28, 199, 665, 863, 1033, 1047, 1082, 1219, 1285
HspAI GCGC 2 cut(s) 209, 829
Kpn2I TCCGGA 1 cut(s) 227
KpnI GGTACC 1 cut(s) 1367
KspI CCGCGG 3 cut(s) 34, 77, 124
Kzo9I GATC 2 cut(s) 314, 958
LmnI GCTCC 6 cut(s) 50, 93, 327, 983, 1291, 1357
Lsp1109I GCAGC 2 cut(s) 145, 1262
LweI GCATC 3 cut(s) 532, 881, 1194
MaeII ACGT 2 cut(s) 282, 678
MaeIII GTNAC 3 cut(s) 49, 623, 1374
MalI GATC 2 cut(s) 316, 960
MboI GATC 2 cut(s) 314, 958
MhlI GDGCHC 2 cut(s) 251, 332
MluCI AATT 9 cut(s) 388, 467, 495, 748, 901, 925, 1118, 1140, 1260
MlyI GAGTC 3 cut(s) 555, 611, 1382
MroI TCCGGA 1 cut(s) 227
MseI TTAA 4 cut(s) 681, 1181, 1293, 1359
MslI CAYNNNNRTG 2 cut(s) 173, 681
MspA1I CMGCKG 4 cut(s) 33, 76, 123, 718
MspI CCGG 4 cut(s) 91, 108, 228, 311
MspR9I CCNGG 2 cut(s) 312, 1149
MvaI CCWGG 1 cut(s) 1149
MvnI CGCG 4 cut(s) 33, 76, 123, 209
NciI CCSGG 1 cut(s) 312
NdeII GATC 2 cut(s) 314, 958
NlaIII CATG 9 cut(s) 28, 199, 665, 863, 1033, 1047, 1082, 1219, 1285
NlaIV GGNNCC 6 cut(s) 46, 80, 127, 329, 1287, 1365
NmeAIII GCCGAG 1 cut(s) 394
NmuCI GTSAC 2 cut(s) 623, 1374
NotI GCGGCCGC 1 cut(s) 118
NsbI TGCGCA 1 cut(s) 830
NspI RCATGY 2 cut(s) 28, 199
PaeI GCATGC 2 cut(s) 28, 199
PaeR7I CTCGAG 1 cut(s) 1095
PfeI GAWTC 1 cut(s) 583
PleI GAGTC 3 cut(s) 555, 611, 1381
PpsI GAGTC 3 cut(s) 555, 611, 1381
PpuMI RGGWCCY 1 cut(s) 796
PshAI GACNNNNGTC 1 cut(s) 621
PsiI TTATAA 1 cut(s) 1266
Psp1406I AACGTT 1 cut(s) 282
Psp5II RGGWCCY 1 cut(s) 796
Psp6I CCWGG 1 cut(s) 1147
PspGI CCWGG 1 cut(s) 1147
PspN4I GGNNCC 6 cut(s) 46, 80, 127, 329, 1287, 1365
PspPI GGNCC 2 cut(s) 125, 796
PspPPI RGGWCCY 1 cut(s) 796
PstNI CAGNNNCTG 1 cut(s) 551
RsaI GTAC 4 cut(s) 323, 1008, 1280, 1365
RsaNI GTAC 4 cut(s) 322, 1007, 1279, 1364
RseI CAYNNNNRTG 2 cut(s) 173, 681
SacII CCGCGG 3 cut(s) 34, 77, 124
SaqAI TTAA 4 cut(s) 681, 1181, 1293, 1359
Sau3AI GATC 2 cut(s) 314, 958
Sau96I GGNCC 2 cut(s) 125, 796
SchI GAGTC 3 cut(s) 555, 611, 1382
ScrFI CCNGG 2 cut(s) 312, 1149
SduI GDGCHC 2 cut(s) 251, 332
SfaNI GCATC 3 cut(s) 532, 881, 1194
SfcI CTRYAG 1 cut(s) 10
Sfr274I CTCGAG 1 cut(s) 1095
Sfr303I CCGCGG 3 cut(s) 34, 77, 124
SgrBI CCGCGG 3 cut(s) 34, 77, 124
SinI GGWCC 1 cut(s) 796
SlaI CTCGAG 1 cut(s) 1095
SmiMI CAYNNNNRTG 2 cut(s) 173, 681
SmlI CTYRAG 2 cut(s) 619, 1095
SmoI CTYRAG 2 cut(s) 619, 1095
SphI GCATGC 2 cut(s) 28, 199
Sse9I AATT 9 cut(s) 388, 467, 495, 748, 901, 925, 1118, 1140, 1260
StyD4I CCNGG 2 cut(s) 310, 1147
TaaI ACNGT 4 cut(s) 321, 403, 509, 986
TaiI ACGT 2 cut(s) 285, 681
TaqI TCGA 4 cut(s) 261, 533, 961, 1096
TasI AATT 9 cut(s) 388, 467, 495, 748, 901, 925, 1118, 1140, 1260
TatI WGTACW 3 cut(s) 321, 1006, 1278
TfiI GAWTC 1 cut(s) 583
Tru1I TTAA 4 cut(s) 681, 1181, 1293, 1359
Tru9I TTAA 4 cut(s) 681, 1181, 1293, 1359
TscAI CASTG 5 cut(s) 324, 408, 918, 991, 1335
TseFI GTSAC 2 cut(s) 623, 1374
TseI GCWGC 2 cut(s) 133, 1250
Tsp45I GTSAC 2 cut(s) 623, 1374
TspDTI ATGAA 7 cut(s) 481, 584, 646, 660, 1032, 1095, 1334
TspGWI ACGGA 2 cut(s) 37, 779
TspRI CASTG 5 cut(s) 324, 408, 918, 991, 1335
VpaK11BI GGWCC 1 cut(s) 796
XapI RAATTY 4 cut(s) 748, 925, 1118, 1260
XceI RCATGY 2 cut(s) 28, 199
XhoI CTCGAG 1 cut(s) 1095
XmiI GTMKAC 1 cut(s) 1242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.