Rh7DG210100

Phosphatidylinositol phosphatidylcholine transfer protein SFH11

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
20111526 .. 20121351
9826 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG210100.1

Sequence Viewer

Length: 1647 bp
ATGCTTACATCAAAACGAGAATCACTAGATAGGGATATAGTGATTTCGAGAGGCAGTGGAGATGGAGAGGATGGTAAACCCTCATCAAGTTTAGGTAAACCTAAAACTATTCATCCTTCCATTGAAACCCATTGGCATTTCCCTGCGCCTCAAGATAGCAAAAAGCCTTCATCTTCAATGTCGAACTTGGGATTCAAAAAGTTCCGTGAGTCGTTCAAGAAACTTGGAGGGAGTAGTAGGAAGAGCATGAAAATGGTTCTTGCAGGAGTTCGTGATCCGAAAGATCAAAAGCTTGTTGACTCTTTTCGAGAACTGCTGTTCCTCCAGGGTCAGCTTCCTTCACAGCACCAGGATTATCATACGCTCTTGCGGTTTCTTCGAATGAGGGACTTTGATCTTGCTAAAGCAAAAGAGGCCTTCTTTACTTATCTCAAGTGGCGTGAGGATTATAGGGTTGACGCAATTCCAAAAGAGTTCAAGTTTGAGGAATATGAGGCAGTTAAGAAGTGCTATCCTCATGGATTCCACGGGGTAGACCGATATGGTAGACCAGTATACATCGAAAGGATTGGGATGGTAGACCTTAACAAGCTACTGCAAGTAACTACACTTGAAAGATTTACAAAGTATCATGTGTCAGAACAAGAGAAAACATTGAATGTGAGATACCCTACTTGCTCCATTGCAGCTAAGAAGCATGTAGCATCTACAACAAGTATCTTAGATGTGCATGGAGTGGGATTGGCAAATTTCTCGAAGCCTGCTCGATATCTCTTTATGGAAATTCAGAAGATTGATAGCAATTACTACCCAGAGACTCTAAATCGCCTGTTTATTGTGAATGCTGGAAATGGGTTTAAGATGCTGTGGAAAGCAGTGAAAGCTTTCCTTGATGCACGAACATTAGCAAAGATTCGAGTGCTGGGATACAATTATCAGAGTGACTTGCTTGAAGTAATTGATCAAAGTAATTTGCCGACATTTCTGGGTGGAAGCTGCACTTGTTCTGAATATGGGGGCTGCCTTTTAAGTGACAGAGGACCCTGGAACAATCCGGAGATTACAGATGTGCTTCAGGCAATCTCTGCAGGCAATGAGGTAACTGATAATGAAGAATATAGTAATGAGGCTTCAGAAGAGCCGCCGATGCAAAATAGGAGAATCCAAGTTCTAGAAGCAGCACTTCAAGACGCCAAGAAAAAAATTGAAGCATTAGAAGCTGCACTTGAGGACACCAAGAATTTCAATAAAGACGCAGGACATGTGGTTGAGGAGTGCAAATTGAGAGTGGTATATGTTTCTCCACCTCAGCCCCCTTCTCCGGTCCCAGAAGGGTCAGAGGAAGGGTCTTCACCAAGAGCTTCTGTTACAGAGAATGGAAATCTTAATGGTTCCGAGTTTTCCAATGCTGCAAAAGGACTTTCAGAGCAGATTGAAGTTCCGAAGAGATCTGCAGAGGAAAATGCACTTATTAAGAAATTGTCAGAGGAAAAGTCAAATGCGCTTCAAACAAATAAGAGGCTTCGTCAGGAGCTGGAACTCTTAAGGAATCAAGGGGGCAAAAGCCATGGTGGTGTTTCAATCATTGTCGTCATTATTATTGGCCTCATTGGCTTACTTTTGGGTTATCTCATGAAGAAGTCGTAA

Protein Analysis

548

Amino Acids

61.54

Weight (kDa)

8.69

Isoelectric Point (pI)

47.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CRAL_TRIO PF00650 171 - 331 4e-27 CRAL/TRIO domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011895)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 4 cut(s) 534, 547, 555, 579
AccIII TCCGGA 1 cut(s) 1054
AciI CCGC 2 cut(s) 370, 1142
AclWI GGATC 1 cut(s) 269
AcsI RAATTY 3 cut(s) 748, 783, 1240
AcuI CTGAAG 2 cut(s) 1058, 1116
AcyI GRCGYC 1 cut(s) 1191
AfiI CCNNNNNNNGG 1 cut(s) 1321
AflII CTTAAG 1 cut(s) 1543
AflIII ACRYGT 1 cut(s) 1261
AjnI CCWGG 3 cut(s) 324, 348, 1043
AloI GAACNNNNNNTCC 2 cut(s) 303, 335
AluBI AGCT 9 cut(s) 292, 334, 592, 689, 884, 996, 1220, 1361, 1534
AluI AGCT 9 cut(s) 292, 334, 592, 689, 884, 996, 1220, 1361, 1534
Alw26I GTCTC 1 cut(s) 809
AlwI GGATC 1 cut(s) 269
AlwNI CAGNNNCTG 1 cut(s) 1534
Aor13HI TCCGGA 1 cut(s) 1054
AoxI GGCC 2 cut(s) 414, 1603
ApeKI GCWGC 6 cut(s) 686, 996, 1020, 1178, 1220, 1409
ApoI RAATTY 3 cut(s) 748, 783, 1240
Asp700I GAANNNNTTC 1 cut(s) 884
AspLEI GCGC 2 cut(s) 148, 1504
AspS9I GGNCC 2 cut(s) 1040, 1324
AsuHPI GGTGA 1 cut(s) 1344
AsuII TTCGAA 1 cut(s) 379
AvaII GGWCC 2 cut(s) 1040, 1324
BarI GAAGNNNNNNTAC 2 cut(s) 1114, 1146
BbsI GAAGAC 1 cut(s) 1341
BbvCI CCTCAGC 1 cut(s) 1308
BbvI GCAGC 6 cut(s) 698, 983, 1007, 1190, 1207, 1396
BccI CCATC 3 cut(s) 56, 65, 568
BcgI CGANNNNNNTGC 2 cut(s) 735, 769
BciT130I CCWGG 3 cut(s) 326, 350, 1045
BciVI GTATCC 1 cut(s) 920
BclI TGATCA 1 cut(s) 961
BcoDI GTCTC 1 cut(s) 809
BfaI CTAG 2 cut(s) 26, 1172
BfmI CTRYAG 2 cut(s) 1086, 1452
BfrI CTTAAG 1 cut(s) 1543
BfuI GTATCC 1 cut(s) 920
BglI GCCNNNNNGGC 1 cut(s) 1611
BglII AGATCT 1 cut(s) 1448
BisI GCNGC 7 cut(s) 687, 997, 1021, 1142, 1179, 1221, 1410
BlsI GCNGC 7 cut(s) 688, 998, 1022, 1143, 1180, 1222, 1411
Bme1390I CCNGG 3 cut(s) 326, 350, 1045
Bme18I GGWCC 2 cut(s) 1040, 1324
BmgT120I GGNCC 2 cut(s) 1040, 1324
BmiI GGNNCC 3 cut(s) 1042, 1326, 1393
BmrFI CCNGG 3 cut(s) 326, 350, 1045
BmsI GCATC 4 cut(s) 713, 852, 883, 1137
BpiI GAAGAC 1 cut(s) 1341
BpmI CTGGAG 1 cut(s) 308
Bpu10I CCTNAGC 1 cut(s) 1308
Bpu14I TTCGAA 1 cut(s) 379
BpuEI CTTGAG 3 cut(s) 135, 416, 1247
BsaHI GRCGYC 1 cut(s) 1191
BsaJI CCNNGG 4 cut(s) 325, 526, 1043, 1567
BsaWI WCCGGW 2 cut(s) 1054, 1321
Bsc4I CCNNNNNNNGG 1 cut(s) 1321
Bse1I ACTGG 1 cut(s) 551
Bse3DI GCAATG 2 cut(s) 681, 1099
BseAI TCCGGA 1 cut(s) 1054
BseBI CCWGG 3 cut(s) 326, 350, 1045
BseDI CCNNGG 4 cut(s) 325, 526, 1043, 1567
BseGI GGATG 3 cut(s) 76, 112, 579
BseLI CCNNNNNNNGG 1 cut(s) 1321
BseMI GCAATG 2 cut(s) 681, 1099
BseMII CTCAG 1 cut(s) 1322
BseNI ACTGG 1 cut(s) 551
BseRI GAGGAG 1 cut(s) 1286
BseXI GCAGC 6 cut(s) 698, 983, 1007, 1190, 1207, 1396
BseYI CCCAGC 1 cut(s) 922
BsgI GTGCAG 2 cut(s) 982, 1206
BshFI GGCC 2 cut(s) 416, 1605
BsiSI CCGG 2 cut(s) 1055, 1322
BslFI GGGAC 2 cut(s) 401, 1310
BslI CCNNNNNNNGG 1 cut(s) 1321
BsmAI GTCTC 1 cut(s) 809
BsmFI GGGAC 2 cut(s) 401, 1310
BsmI GAATGC 1 cut(s) 847
BsnI GGCC 2 cut(s) 416, 1605
Bsp119I TTCGAA 1 cut(s) 379
Bsp13I TCCGGA 1 cut(s) 1054
Bsp143I GATC 5 cut(s) 274, 283, 394, 961, 1448
Bsp19I CCATGG 1 cut(s) 1567
BspACI CCGC 2 cut(s) 370, 1142
BspANI GGCC 2 cut(s) 416, 1605
BspCNI CTCAG 1 cut(s) 1321
BspEI TCCGGA 1 cut(s) 1054
BspHI TCATGA 1 cut(s) 1632
BspLI GGNNCC 3 cut(s) 1042, 1326, 1393
BspMAI CTGCAG 2 cut(s) 1090, 1456
BspPI GGATC 1 cut(s) 269
BspQI GCTCTTC 2 cut(s) 236, 1131
BspT104I TTCGAA 1 cut(s) 379
BspTI CTTAAG 1 cut(s) 1543
BsrDI GCAATG 2 cut(s) 681, 1099
BsrI ACTGG 1 cut(s) 551
BssECI CCNNGG 4 cut(s) 325, 526, 1043, 1567
BssMI GATC 5 cut(s) 274, 283, 394, 961, 1448
BssNAI GTATAC 1 cut(s) 556
BssNI GRCGYC 1 cut(s) 1191
BssT1I CCWWGG 1 cut(s) 1567
Bst1107I GTATAC 1 cut(s) 556
Bst2UI CCWGG 3 cut(s) 326, 350, 1045
Bst6I CTCTTC 3 cut(s) 236, 1131, 1439
BstACI GRCGYC 1 cut(s) 1191
BstAFI CTTAAG 1 cut(s) 1543
BstAPI GCANNNNNTGC 1 cut(s) 1085
BstBI TTCGAA 1 cut(s) 379
BstC8I GCNNGC 2 cut(s) 762, 1090
BstDEI CTNAG 3 cut(s) 690, 721, 1308
BstDSI CCRYGG 2 cut(s) 526, 1567
BstF5I GGATG 3 cut(s) 76, 112, 579
BstHHI GCGC 2 cut(s) 148, 1504
BstKTI GATC 5 cut(s) 277, 286, 397, 964, 1451
BstMAI GTCTC 1 cut(s) 809
BstMBI GATC 5 cut(s) 274, 283, 394, 961, 1448
BstMWI GCNNNNNNNGC 6 cut(s) 413, 881, 1085, 1147, 1217, 1611
BstNI CCWGG 3 cut(s) 326, 350, 1045
BstNSI RCATGY 2 cut(s) 701, 1265
BstSCI CCNGG 3 cut(s) 324, 348, 1043
BstSFI CTRYAG 2 cut(s) 1086, 1452
BstV1I GCAGC 6 cut(s) 698, 983, 1007, 1190, 1207, 1396
BstV2I GAAGAC 1 cut(s) 1341
BstX2I RGATCY 1 cut(s) 1448
BstYI RGATCY 1 cut(s) 1448
BstZ17I GTATAC 1 cut(s) 556
BsuI GTATCC 1 cut(s) 920
BsuRI GGCC 2 cut(s) 416, 1605
BtgI CCRYGG 2 cut(s) 526, 1567
BtsCI GGATG 3 cut(s) 76, 112, 579
BtsI GCAGTG 2 cut(s) 61, 882
BtsIMutI CAGTG 2 cut(s) 61, 882
Cac8I GCNNGC 2 cut(s) 762, 1090
CaiI CAGNNNCTG 1 cut(s) 1534
CciI TCATGA 1 cut(s) 1632
CfoI GCGC 2 cut(s) 148, 1504
Cfr13I GGNCC 2 cut(s) 1040, 1324
CseI GACGC 3 cut(s) 467, 1199, 1262
CviAII CATG 8 cut(s) 247, 518, 632, 698, 731, 1262, 1568, 1633
DdeI CTNAG 3 cut(s) 690, 721, 1308
DpnI GATC 5 cut(s) 276, 285, 396, 963, 1450
DpnII GATC 5 cut(s) 274, 283, 394, 961, 1448
Eam1104I CTCTTC 3 cut(s) 236, 1131, 1439
EarI CTCTTC 3 cut(s) 236, 1131, 1439
Eco130I CCWWGG 1 cut(s) 1567
Eco147I AGGCCT 1 cut(s) 416
Eco32I GATATC 1 cut(s) 770
Eco47I GGWCC 2 cut(s) 1040, 1324
Eco57I CTGAAG 2 cut(s) 1058, 1116
EcoO109I RGGNCCY 1 cut(s) 1040
EcoRII CCWGG 3 cut(s) 324, 348, 1043
EcoRV GATATC 1 cut(s) 770
EcoT14I CCWWGG 1 cut(s) 1567
ErhI CCWWGG 1 cut(s) 1567
FaeI CATG 8 cut(s) 250, 521, 635, 701, 734, 1265, 1571, 1636
FalI AAGNNNNNCTT 8 cut(s) 873, 905, 985, 1017, 1167, 1199, 1209, 1241
FaqI GGGAC 2 cut(s) 401, 1310
FatI CATG 8 cut(s) 246, 517, 631, 697, 730, 1261, 1567, 1632
FbaI TGATCA 1 cut(s) 961
FblI GTMKAC 4 cut(s) 534, 547, 555, 579
Fnu4HI GCNGC 7 cut(s) 687, 997, 1021, 1142, 1179, 1221, 1410
FokI GGATG 3 cut(s) 83, 99, 586
Fsp4HI GCNGC 7 cut(s) 687, 997, 1021, 1142, 1179, 1221, 1410
FspBI CTAG 2 cut(s) 26, 1172
GlaI GCGC 2 cut(s) 147, 1503
GluI GCNGC 7 cut(s) 687, 997, 1021, 1142, 1179, 1221, 1410
GsaI CCCAGC 1 cut(s) 926
GsuI CTGGAG 1 cut(s) 308
HaeIII GGCC 2 cut(s) 416, 1605
HapII CCGG 2 cut(s) 1055, 1322
HgaI GACGC 3 cut(s) 467, 1199, 1262
HhaI GCGC 2 cut(s) 148, 1504
Hin1I GRCGYC 1 cut(s) 1191
Hin1II CATG 8 cut(s) 250, 521, 635, 701, 734, 1265, 1571, 1636
Hin6I GCGC 2 cut(s) 146, 1502
HinP1I GCGC 2 cut(s) 146, 1502
HincII GTYRAC 2 cut(s) 298, 457
HindII GTYRAC 2 cut(s) 298, 457
HindIII AAGCTT 2 cut(s) 290, 882
HinfI GANTC 9 cut(s) 20, 192, 209, 299, 522, 817, 913, 1161, 1549
HpaII CCGG 2 cut(s) 1055, 1322
HphI GGTGA 1 cut(s) 1344
Hpy166II GTNNAC 8 cut(s) 77, 98, 298, 457, 535, 548, 556, 580
Hpy8I GTNNAC 8 cut(s) 77, 98, 298, 457, 535, 548, 556, 580
HpyAV CCTTC 7 cut(s) 126, 177, 348, 427, 1325, 1326, 1337
HpyF10VI GCNNNNNNNGC 6 cut(s) 413, 881, 1085, 1147, 1217, 1611
HpyF3I CTNAG 3 cut(s) 690, 721, 1308
Hsp92I GRCGYC 1 cut(s) 1191
Hsp92II CATG 8 cut(s) 250, 521, 635, 701, 734, 1265, 1571, 1636
HspAI GCGC 2 cut(s) 146, 1502
Kpn2I TCCGGA 1 cut(s) 1054
Ksp22I TGATCA 1 cut(s) 961
Kzo9I GATC 5 cut(s) 274, 283, 394, 961, 1448
LguI GCTCTTC 2 cut(s) 236, 1131
LmnI GCTCC 2 cut(s) 683, 1531
Lsp1109I GCAGC 6 cut(s) 698, 983, 1007, 1190, 1207, 1396
LweI GCATC 4 cut(s) 713, 852, 883, 1137
MaeI CTAG 2 cut(s) 26, 1172
MaeIII GTNAC 5 cut(s) 601, 941, 1031, 1099, 1366
MalI GATC 5 cut(s) 276, 285, 396, 963, 1450
MboI GATC 5 cut(s) 274, 283, 394, 961, 1448
MboII GAAGA 8 cut(s) 165, 253, 368, 802, 1124, 1148, 1341, 1456
MflI RGATCY 1 cut(s) 1448
MlyI GAGTC 3 cut(s) 218, 293, 811
MroI TCCGGA 1 cut(s) 1054
MroXI GAANNNNTTC 1 cut(s) 884
MseI TTAA 7 cut(s) 501, 585, 858, 1028, 1386, 1473, 1544
MslI CAYNNNNRTG 2 cut(s) 251, 1572
MspCI CTTAAG 1 cut(s) 1543
MspI CCGG 2 cut(s) 1055, 1322
MspR9I CCNGG 3 cut(s) 326, 350, 1045
Mva1269I GAATGC 1 cut(s) 847
MvaI CCWGG 3 cut(s) 326, 350, 1045
MwoI GCNNNNNNNGC 6 cut(s) 413, 881, 1085, 1147, 1217, 1611
NcoI CCATGG 1 cut(s) 1567
NdeII GATC 5 cut(s) 274, 283, 394, 961, 1448
NlaIII CATG 8 cut(s) 250, 521, 635, 701, 734, 1265, 1571, 1636
NlaIV GGNNCC 3 cut(s) 1042, 1326, 1393
NmuCI GTSAC 2 cut(s) 941, 1031
NspI RCATGY 2 cut(s) 701, 1265
NspV TTCGAA 1 cut(s) 379
PagI TCATGA 1 cut(s) 1632
PceI AGGCCT 1 cut(s) 416
PciI ACATGT 1 cut(s) 1261
PciSI GCTCTTC 2 cut(s) 236, 1131
PctI GAATGC 1 cut(s) 847
PdmI GAANNNNTTC 1 cut(s) 884
PfeI GAWTC 6 cut(s) 20, 192, 522, 913, 1161, 1549
PkrI GCNGC 7 cut(s) 688, 998, 1022, 1143, 1180, 1222, 1411
PleI GAGTC 3 cut(s) 217, 293, 811
PpsI GAGTC 3 cut(s) 217, 293, 811
PpuMI RGGWCCY 1 cut(s) 1040
PscI ACATGT 1 cut(s) 1261
Psp5II RGGWCCY 1 cut(s) 1040
Psp6I CCWGG 3 cut(s) 324, 348, 1043
PspFI CCCAGC 1 cut(s) 922
PspGI CCWGG 3 cut(s) 324, 348, 1043
PspN4I GGNNCC 3 cut(s) 1042, 1326, 1393
PspPI GGNCC 2 cut(s) 1040, 1324
PspPPI RGGWCCY 1 cut(s) 1040
PstI CTGCAG 2 cut(s) 1090, 1456
PstNI CAGNNNCTG 1 cut(s) 1534
PsuI RGATCY 1 cut(s) 1448
RseI CAYNNNNRTG 2 cut(s) 251, 1572
SapI GCTCTTC 2 cut(s) 236, 1131
SaqAI TTAA 7 cut(s) 501, 585, 858, 1028, 1386, 1473, 1544
SatI GCNGC 7 cut(s) 687, 997, 1021, 1142, 1179, 1221, 1410
Sau3AI GATC 5 cut(s) 274, 283, 394, 961, 1448
Sau96I GGNCC 2 cut(s) 1040, 1324
SchI GAGTC 3 cut(s) 218, 293, 811
ScrFI CCNGG 3 cut(s) 326, 350, 1045
SfaNI GCATC 4 cut(s) 713, 852, 883, 1137
SfcI CTRYAG 2 cut(s) 1086, 1452
SfuI TTCGAA 1 cut(s) 379
SinI GGWCC 2 cut(s) 1040, 1324
SmiMI CAYNNNNRTG 2 cut(s) 251, 1572
SmlI CTYRAG 4 cut(s) 150, 431, 1226, 1543
SmoI CTYRAG 4 cut(s) 150, 431, 1226, 1543
SseBI AGGCCT 1 cut(s) 416
SsiI CCGC 2 cut(s) 370, 1142
SspMI CTAG 2 cut(s) 26, 1172
StuI AGGCCT 1 cut(s) 416
StyD4I CCNGG 3 cut(s) 324, 348, 1043
StyI CCWWGG 1 cut(s) 1567
TaqI TCGA 8 cut(s) 47, 182, 307, 379, 561, 755, 766, 916
TaqII GACCGA 1 cut(s) 552
TauI GCSGC 1 cut(s) 1144
TfiI GAWTC 6 cut(s) 20, 192, 522, 913, 1161, 1549
Tru1I TTAA 7 cut(s) 501, 585, 858, 1028, 1386, 1473, 1544
Tru9I TTAA 7 cut(s) 501, 585, 858, 1028, 1386, 1473, 1544
TscAI CASTG 2 cut(s) 61, 882
TseFI GTSAC 2 cut(s) 941, 1031
TseI GCWGC 6 cut(s) 686, 996, 1020, 1178, 1220, 1409
Tsp45I GTSAC 2 cut(s) 941, 1031
TspDTI ATGAA 4 cut(s) 101, 159, 263, 1125
TspGWI ACGGA 1 cut(s) 194
TspRI CASTG 2 cut(s) 61, 882
Vha464I CTTAAG 1 cut(s) 1543
VpaK11BI GGWCC 2 cut(s) 1040, 1324
XapI RAATTY 3 cut(s) 748, 783, 1240
XbaI TCTAGA 1 cut(s) 1171
XceI RCATGY 2 cut(s) 701, 1265
XmiI GTMKAC 4 cut(s) 534, 547, 555, 579
XmnI GAANNNNTTC 1 cut(s) 884
XspI CTAG 2 cut(s) 26, 1172
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.