Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0001420

Physical Location & Seq

Genomic Coordinates Reverse (-)

5746596 .. 5748705

Gene Structure 2110 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0074600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1452 bp

ATGTCGACCATTTCCATTATACACTCCCCATCAACGTTAACTCGATTCCCTTGTATCTTTCGCACGAAACCTCACCCCATAATTCATCATCAACGATTCACCACCCGCTCTGCCGCTGGTCGTCGGCAGCTCAACCTATCAGAGCAATCTTCCTCCACCGCCTCGCCAGTGTACGTCACGCTACCTTTAGCTGAGCTCAATGTCTACGCGGACCCGGTGGGCACCGTGGGCAGGCGCGAGTTCACGGTTGAGTCACTTGGGATGCTTGCAGAAGCAGGAGTTGAAGGCGTGGTCATGGATGTGTGGTGGGCCCTGGTCGAGAGGGATCAGCCTAGGGTTTATCATTGGGAACCCTTTTTGGAGATGGCCGAGCTGGTTCAGCGCAGCGGATTAAAGATTCGGGTCGTGCTTGCGTTTCACGAGGGTTATCCTCATACTCAAAGTTGCGCAGAAAACCTTCCTCTATGGATACTTGAAGAGTTCTATAAAAATCGTGATTTGGTATGTGCTGAAAGACATGGATGGCATAAAGAAGAATACATTTCGCTCGGGTGTGATACCCTTCCTGTTTTACGGGGGCGTTCACCACTCGAAGCATATGCAGATTTCATGAGGAGCTTCAGAGACAATTTCAGACCTTTTCTAGGTCTTGTTATAACAGGAATTCAAGTTGGTATGGGCCCTGAAGGTGAATTAAGATATCCTTCTTCTGATTCCCAGGATTTGTTATTGGGTCGTGCTGGAAAGTTTCATTGCTATGATAAGTATATGGTTGCGTCTCTCAAAGAACACGCCAGAGAGGTCGGAATGCCTGAATGGGGAAATGTGTATCGTGTTGCAGAACAATTGCAATTTGCCGAAAATGGTAATGATTCTTGGAATACGCCGTACGGTGCATTTTTGCTTGAATGGTACTCTGGAATGTTGCTTATGCACGGAGAAAGGATATGCGAGCAAGCTGAGGCCATTTTCTCGGGAACAAATGTTATTATGTCAGCAAAACTAGCAGGGCACTATTGCCATTACCTCACTCAGTCTCATGTTTCGGAGCTGACTGCTGGCTATTACAACACTTCAACAAGAGATGGATACTTGCCGTTTGCTCGCATGTTTGCTAGGCATGGGTTTGCGTTATGCTGCTCCTGTTTTGACTTGAAAGATGAGATGGAAAGGTATCCCACCAGTAGTCCAGAAGGTCTTCTCAAACAGATGCTCTCGGCTGCTAGGGTTTGTGGTATTCCCGTGGAAGGTGAAACTTCTGCATCCTTTTGCAATGGGAGACTAATATCGTTGAAACAAGTGGTAACAATGTCCAAGCATTACTTATCTGGACTGGAAAACCCCTCCTTCTCATTCAAGCTGAGGGCCAACAAGGAGGAGTTGTTTAATTCACCTAAATATTGGGCTATGTTTACTGATTTTGTCAGCCAAATGTCTAATGCATGTCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000226 GO:0003006 GO:0003674 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005622 GO:0005623 GO:0005628 GO:0005634 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0008150 GO:0008525 GO:0008526 GO:0009653 GO:0009987 GO:0010876 GO:0010927 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016192 GO:0019953 GO:0022402 GO:0022413 GO:0022414 GO:0022607 GO:0030154 GO:0030427 GO:0030435 GO:0030437 GO:0031321 GO:0031322 GO:0032153 GO:0032502 GO:0032505 GO:0032989 GO:0033036 GO:0034293 GO:0035838 GO:0042763 GO:0042764 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043934 GO:0043935 GO:0044085 GO:0044424 GO:0044464 GO:0044703 GO:0048193 GO:0048468 GO:0048646 GO:0048856 GO:0048869 GO:0051179 GO:0051234 GO:0051286 GO:0051321 GO:0051704 GO:0060187 GO:0061024 GO:0071702 GO:0071840 GO:0120009 GO:0120010 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRAL_TRIO

Protein Analysis

483

Amino Acids

54.77

Weight (kDa)

6.2

Isoelectric Point (pI)

49.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_14	PF01373	76 - 472	2.8e-88	Glycosyl hydrolase family 14

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001420)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00170 AT4G00170
fragaria_vesca	FvH4_5g18750 FvH4_7g11210 FvH4_7g11210
malus_domestica	MD00G1043700.v1.1 MD02G1209600.v1.1 MD06G1060200.v1.1 MD07G1116700.v1.1
prunus_persica	Prupe.2G139900_v2.0.a1 Prupe.2G139900_v2.0.a1 Prupe.5G071100_v2.0.a1
pyrus_communis	pycom02g17100 pycom06g04970 pycom07g10820 pycom976g00100
rosa_chinensis	RchiOBHm_Chr1g0349311 RchiOBHm_Chr2g0099851 RchiOBHm_Chr6g0272641 RchiOBHm_Chr7g0203091
rosa_laevigata	RLG00000001232 RLG00000003553 RLG00000011947 RLG00000028558
rosa_multiflora	Rmu_sc0004158.1_g000005 Rmu_sc0006094.1_g000010 Rmu_sc0008864.1_g000005
rosa_roxburghii	Rroxscaffold_1G00035470 Rroxscaffold_1G00035870 Rroxscaffold_2G00106200 Rroxscaffold_3G00254080
rosa_rugosa	Rorug01G0202500 Rorug01G0202600 Rorug01G0202700 Rorug04G0012500 Rorug06G0061900 Rorug07G0074600
rosa_samantha	Rh1AG220200 Rh1BG186200 Rh1CG205300 Rh1DG215700 Rh2BG172200 Rh2CG137700 Rh2DG138100 Rh4AG047500 Rh4CG050300 Rh7AG203300 Rh7BG202900 Rh7CG214000
rosa_wichuraiana	Rw1G018690 Rw2G010320 Rw7G017740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	656
Acc16I	TGCGCA	1 cut(s)	448
AccB1I	GGYRCC	1 cut(s)	221
AccBSI	CCGCTC	1 cut(s)	108
AccI	GTMKAC	2 cut(s)	5, 204
AccII	CGCG	2 cut(s)	209, 237
AciI	CCGC	5 cut(s)	106, 114, 159, 209, 387
AclI	AACGTT	1 cut(s)	35
AclWI	GGATC	1 cut(s)	333
AcoI	YGGCCR	1 cut(s)	366
AcsI	RAATTY	1 cut(s)	663
AcuI	CTGAAG	2 cut(s)	604, 705
AfaI	GTAC	3 cut(s)	173, 890, 914
AfiI	CCNNNNNNNGG	4 cut(s)	231, 644, 818, 1247
AgsI	TTSAA	8 cut(s)	284, 476, 668, 908, 1077, 1156, 1294, 1357
AjnI	CCWGG	2 cut(s)	312, 717
AluBI	AGCT	8 cut(s)	130, 191, 196, 373, 618, 959, 1051, 1360
AluI	AGCT	8 cut(s)	130, 191, 196, 373, 618, 959, 1051, 1360
Alw21I	GWGCWC	1 cut(s)	198
Alw26I	GTCTC	4 cut(s)	618, 783, 1041, 1273
AlwI	GGATC	1 cut(s)	333
Ama87I	CYCGRG	2 cut(s)	548, 973
AoxI	GGCC	5 cut(s)	309, 366, 679, 963, 1365
ApaI	GGGCCC	2 cut(s)	313, 683
ApeKI	GCWGC	4 cut(s)	127, 384, 1137, 1220
ApoI	RAATTY	1 cut(s)	663
Asp700I	GAANNNNTTC	2 cut(s)	456, 1197
AspA2I	CCTAGG	1 cut(s)	332
AspLEI	GCGC	3 cut(s)	237, 384, 449
AspS9I	GGNCC	6 cut(s)	211, 309, 310, 679, 680, 1365
AsuC2I	CCSGG	1 cut(s)	215
AsuHPI	GGTGA	6 cut(s)	65, 91, 576, 701, 1262, 1383
AvaI	CYCGRG	2 cut(s)	548, 973
AvaII	GGWCC	1 cut(s)	211
AvrII	CCTAGG	1 cut(s)	332
BaeGI	GKGCMC	4 cut(s)	224, 313, 683, 1014
BanI	GGYRCC	1 cut(s)	221
BanII	GRGCYC	3 cut(s)	198, 313, 683
BauI	CACGAG	1 cut(s)	419
BbsI	GAAGAC	1 cut(s)	1190
Bbv12I	GWGCWC	1 cut(s)	198
BbvCI	CCTCAGC	2 cut(s)	960, 1361
BbvI	GCAGC	4 cut(s)	139, 396, 1124, 1207
BccI	CCATC	5 cut(s)	37, 358, 516, 1079, 1159
BceAI	ACGGC	2 cut(s)	871, 1081
BcgI	CGANNNNNNTGC	2 cut(s)	581, 615
BciT130I	CCWGG	2 cut(s)	314, 719
BciVI	GTATCC	3 cut(s)	462, 1082, 1185
BcnI	CCSGG	1 cut(s)	215
BcoDI	GTCTC	4 cut(s)	618, 783, 1041, 1273
BfaI	CTAG	5 cut(s)	333, 644, 1004, 1116, 1224
BfuI	GTATCC	3 cut(s)	462, 1082, 1185
BisI	GCNGC	5 cut(s)	114, 128, 385, 1138, 1221
BlnI	CCTAGG	1 cut(s)	332
BlpI	GCTNAGC	1 cut(s)	192
BlsI	GCNGC	5 cut(s)	115, 129, 386, 1139, 1222
Bme1390I	CCNGG	3 cut(s)	215, 314, 719
Bme18I	GGWCC	1 cut(s)	211
BmeT110I	CYCGRG	2 cut(s)	548, 973
BmgT120I	GGNCC	6 cut(s)	211, 309, 310, 679, 680, 1365
BmiI	GGNNCC	5 cut(s)	213, 223, 311, 351, 681
BmrFI	CCNGG	3 cut(s)	215, 314, 719
BmsI	GCATC	3 cut(s)	252, 1200, 1271
BpiI	GAAGAC	1 cut(s)	1190
Bpu10I	CCTNAGC	2 cut(s)	960, 1361
Bpu1102I	GCTNAGC	1 cut(s)	192
BpuMI	CCSGG	1 cut(s)	215
BsaJI	CCNNGG	5 cut(s)	225, 312, 332, 717, 1242
BsaXI	ACNNNNNCTCC	2 cut(s)	1367, 1397
Bsc4I	CCNNNNNNNGG	4 cut(s)	231, 644, 818, 1247
Bse1I	ACTGG	3 cut(s)	167, 1182, 1338
Bse3DI	GCAATG	2 cut(s)	751, 1279
BseBI	CCWGG	2 cut(s)	314, 719
BseDI	CCNNGG	5 cut(s)	225, 312, 332, 717, 1242
BseGI	GGATG	4 cut(s)	267, 304, 527, 1262
BseLI	CCNNNNNNNGG	4 cut(s)	231, 644, 818, 1247
BseMI	GCAATG	2 cut(s)	751, 1279
BseMII	CTCAG	4 cut(s)	183, 951, 1046, 1352
BseNI	ACTGG	3 cut(s)	167, 1182, 1338
BseRI	GAGGAG	2 cut(s)	628, 1391
BseSI	GKGCMC	4 cut(s)	224, 313, 683, 1014
BseXI	GCAGC	4 cut(s)	139, 396, 1124, 1207
Bsh1236I	CGCG	2 cut(s)	209, 237
BshFI	GGCC	5 cut(s)	311, 368, 681, 965, 1367
BshNI	GGYRCC	1 cut(s)	221
BsiHKAI	GWGCWC	1 cut(s)	198
BsiHKCI	CYCGRG	2 cut(s)	548, 973
BsiSI	CCGG	1 cut(s)	215
BsiWI	CGTACG	1 cut(s)	888
BslI	CCNNNNNNNGG	4 cut(s)	231, 644, 818, 1247
BsmAI	GTCTC	4 cut(s)	618, 783, 1041, 1273
BsmBI	CGTCTC	1 cut(s)	783
BsmI	GAATGC	1 cut(s)	813
BsnI	GGCC	5 cut(s)	311, 368, 681, 965, 1367
BsoBI	CYCGRG	2 cut(s)	548, 973
Bsp120I	GGGCCC	2 cut(s)	309, 679
Bsp1286I	GDGCHC	5 cut(s)	198, 224, 313, 683, 1014
Bsp143I	GATC	1 cut(s)	325
Bsp1720I	GCTNAGC	1 cut(s)	192
BspACI	CCGC	5 cut(s)	106, 114, 159, 209, 387
BspANI	GGCC	5 cut(s)	311, 368, 681, 965, 1367
BspCNI	CTCAG	4 cut(s)	184, 952, 1045, 1353
BspFNI	CGCG	2 cut(s)	209, 237
BspHI	TCATGA	1 cut(s)	609
BspLI	GGNNCC	5 cut(s)	213, 223, 311, 351, 681
BspPI	GGATC	1 cut(s)	333
BspT107I	GGYRCC	1 cut(s)	221
BsrBI	CCGCTC	1 cut(s)	108
BsrDI	GCAATG	2 cut(s)	751, 1279
BsrI	ACTGG	3 cut(s)	167, 1182, 1338
BssECI	CCNNGG	5 cut(s)	225, 312, 332, 717, 1242
BssMI	GATC	1 cut(s)	325
BssSI	CACGAG	1 cut(s)	419
BssT1I	CCWWGG	1 cut(s)	332
Bst2BI	CACGAG	1 cut(s)	419
Bst2UI	CCWGG	2 cut(s)	314, 719
Bst4CI	ACNGT	3 cut(s)	226, 247, 893
Bst6I	CTCTTC	1 cut(s)	471
BstC8I	GCNNGC	7 cut(s)	233, 267, 411, 953, 957, 1060, 1105
BstDEI	CTNAG	4 cut(s)	192, 960, 1032, 1361
BstDSI	CCRYGG	2 cut(s)	225, 1242
BstENI	CCTNNNNNAGG	1 cut(s)	642
BstF5I	GGATG	4 cut(s)	267, 304, 527, 1262
BstFNI	CGCG	2 cut(s)	209, 237
BstHHI	GCGC	3 cut(s)	237, 384, 449
BstKTI	GATC	1 cut(s)	328
BstMAI	GTCTC	4 cut(s)	618, 783, 1041, 1273
BstMBI	GATC	1 cut(s)	325
BstMWI	GCNNNNNNNGC	3 cut(s)	228, 379, 1004
BstNI	CCWGG	2 cut(s)	314, 719
BstNSI	RCATGY	2 cut(s)	1111, 1446
BstSCI	CCNGG	3 cut(s)	213, 312, 717
BstSLI	GKGCMC	4 cut(s)	224, 313, 683, 1014
BstUI	CGCG	2 cut(s)	209, 237
BstV1I	GCAGC	4 cut(s)	139, 396, 1124, 1207
BstV2I	GAAGAC	1 cut(s)	1190
BsuI	GTATCC	3 cut(s)	462, 1082, 1185
BsuRI	GGCC	5 cut(s)	311, 368, 681, 965, 1367
BtgI	CCRYGG	2 cut(s)	225, 1242
BtsCI	GGATG	4 cut(s)	267, 304, 527, 1262
BtsIMutI	CAGTG	1 cut(s)	174
Cac8I	GCNNGC	7 cut(s)	233, 267, 411, 953, 957, 1060, 1105
CciI	TCATGA	1 cut(s)	609
CfoI	GCGC	3 cut(s)	237, 384, 449
Cfr13I	GGNCC	6 cut(s)	211, 309, 310, 679, 680, 1365
CseI	GACGC	1 cut(s)	765
Csp6I	GTAC	3 cut(s)	172, 889, 913
CviAII	CATG	7 cut(s)	295, 518, 610, 1040, 1108, 1121, 1443
CviQI	GTAC	3 cut(s)	172, 889, 913
DdeI	CTNAG	4 cut(s)	192, 960, 1032, 1361
DpnI	GATC	1 cut(s)	327
DpnII	GATC	1 cut(s)	325
EaeI	YGGCCR	1 cut(s)	366
Eam1104I	CTCTTC	1 cut(s)	471
EarI	CTCTTC	1 cut(s)	471
Ecl136II	GAGCTC	1 cut(s)	196
Eco130I	CCWWGG	1 cut(s)	332
Eco24I	GRGCYC	3 cut(s)	198, 313, 683
Eco32I	GATATC	1 cut(s)	701
Eco47I	GGWCC	1 cut(s)	211
Eco53kI	GAGCTC	1 cut(s)	196
Eco57I	CTGAAG	2 cut(s)	604, 705
Eco88I	CYCGRG	2 cut(s)	548, 973
EcoICRI	GAGCTC	1 cut(s)	196
EcoNI	CCTNNNNNAGG	1 cut(s)	642
EcoO109I	RGGNCCY	2 cut(s)	310, 680
EcoRI	GAATTC	1 cut(s)	663
EcoRII	CCWGG	2 cut(s)	312, 717
EcoRV	GATATC	1 cut(s)	701
EcoT14I	CCWWGG	1 cut(s)	332
EcoT22I	ATGCAT	1 cut(s)	1444
EcoT38I	GRGCYC	3 cut(s)	198, 313, 683
ErhI	CCWWGG	1 cut(s)	332
Esp3I	CGTCTC	1 cut(s)	783
FaeI	CATG	7 cut(s)	298, 521, 613, 1043, 1111, 1124, 1446
FalI	AAGNNNNNCTT	4 cut(s)	688, 720, 1307, 1339
FatI	CATG	7 cut(s)	294, 517, 609, 1039, 1107, 1120, 1442
FauI	CCCGC	1 cut(s)	113
FauNDI	CATATG	1 cut(s)	598
FblI	GTMKAC	2 cut(s)	5, 204
Fnu4HI	GCNGC	5 cut(s)	114, 128, 385, 1138, 1221
FokI	GGATG	4 cut(s)	274, 311, 534, 1249
FriOI	GRGCYC	3 cut(s)	198, 313, 683
Fsp4HI	GCNGC	5 cut(s)	114, 128, 385, 1138, 1221
FspBI	CTAG	5 cut(s)	333, 644, 1004, 1116, 1224
FspI	TGCGCA	1 cut(s)	448
GlaI	GCGC	3 cut(s)	236, 383, 448
GluI	GCNGC	5 cut(s)	114, 128, 385, 1138, 1221
HaeIII	GGCC	5 cut(s)	311, 368, 681, 965, 1367
HapII	CCGG	1 cut(s)	215
HgaI	GACGC	1 cut(s)	765
HhaI	GCGC	3 cut(s)	237, 384, 449
Hin1II	CATG	7 cut(s)	298, 521, 613, 1043, 1111, 1124, 1446
Hin6I	GCGC	3 cut(s)	235, 382, 447
HinP1I	GCGC	3 cut(s)	235, 382, 447
HincII	GTYRAC	2 cut(s)	6, 39
HindII	GTYRAC	2 cut(s)	6, 39
HinfI	GANTC	6 cut(s)	45, 96, 251, 397, 713, 872
HpaI	GTTAAC	1 cut(s)	39
HpaII	CCGG	1 cut(s)	215
HphI	GGTGA	6 cut(s)	65, 91, 576, 701, 1262, 1383
Hpy166II	GTNNAC	7 cut(s)	6, 39, 172, 205, 243, 584, 1413
Hpy188I	TCNGA	6 cut(s)	142, 623, 635, 712, 806, 1048
Hpy188III	TCNNGA	8 cut(s)	319, 419, 494, 610, 918, 975, 1190, 1329
Hpy8I	GTNNAC	7 cut(s)	6, 39, 172, 205, 243, 584, 1413
Hpy99I	CGWCG	1 cut(s)	126
HpyAV	CCTTC	8 cut(s)	278, 467, 572, 680, 714, 1187, 1241, 1357
HpyCH4III	ACNGT	3 cut(s)	226, 247, 893
HpyCH4IV	ACGT	2 cut(s)	35, 174
HpyCH4V	TGCA	9 cut(s)	269, 602, 839, 850, 896, 934, 1262, 1272, 1442
HpyF10VI	GCNNNNNNNGC	3 cut(s)	228, 379, 1004
HpyF3I	CTNAG	4 cut(s)	192, 960, 1032, 1361
HpySE526I	ACGT	2 cut(s)	35, 174
Hsp92II	CATG	7 cut(s)	298, 521, 613, 1043, 1111, 1124, 1446
HspAI	GCGC	3 cut(s)	235, 382, 447
KspAI	GTTAAC	1 cut(s)	39
Kzo9I	GATC	1 cut(s)	325
LmnI	GCTCC	3 cut(s)	615, 1048, 1145
Lsp1109I	GCAGC	4 cut(s)	139, 396, 1124, 1207
LweI	GCATC	3 cut(s)	252, 1200, 1271
MaeI	CTAG	5 cut(s)	333, 644, 1004, 1116, 1224
MaeII	ACGT	2 cut(s)	35, 174
MaeIII	GTNAC	3 cut(s)	175, 252, 1303
MalI	GATC	1 cut(s)	327
MbiI	CCGCTC	1 cut(s)	108
MboI	GATC	1 cut(s)	325
MboII	GAAGA	5 cut(s)	141, 488, 545, 699, 1190
MfeI	CAATTG	1 cut(s)	845
MhlI	GDGCHC	5 cut(s)	198, 224, 313, 683, 1014
MluCI	AATT	7 cut(s)	81, 628, 663, 692, 845, 851, 1387
MlyI	GAGTC	1 cut(s)	260
MmeI	TCCRAC	1 cut(s)	784
Mph1103I	ATGCAT	1 cut(s)	1444
MroXI	GAANNNNTTC	2 cut(s)	456, 1197
MseI	TTAA	4 cut(s)	38, 392, 695, 1386
MslI	CAYNNNNRTG	3 cut(s)	299, 756, 1447
MspA1I	CMGCKG	2 cut(s)	116, 387
MspI	CCGG	1 cut(s)	215
MspR9I	CCNGG	3 cut(s)	215, 314, 719
MunI	CAATTG	1 cut(s)	845
Mva1269I	GAATGC	1 cut(s)	813
MvaI	CCWGG	2 cut(s)	314, 719
MvnI	CGCG	2 cut(s)	209, 237
MwoI	GCNNNNNNNGC	3 cut(s)	228, 379, 1004
NciI	CCSGG	1 cut(s)	215
NdeI	CATATG	1 cut(s)	598
NdeII	GATC	1 cut(s)	325
NlaIII	CATG	7 cut(s)	298, 521, 613, 1043, 1111, 1124, 1446
NlaIV	GGNNCC	5 cut(s)	213, 223, 311, 351, 681
NmeAIII	GCCGAG	2 cut(s)	394, 1196
NmuCI	GTSAC	2 cut(s)	175, 252
NsbI	TGCGCA	1 cut(s)	448
NsiI	ATGCAT	1 cut(s)	1444
NspI	RCATGY	2 cut(s)	1111, 1446
PagI	TCATGA	1 cut(s)	609
PctI	GAATGC	1 cut(s)	813
PdmI	GAANNNNTTC	2 cut(s)	456, 1197
PfeI	GAWTC	5 cut(s)	45, 96, 397, 713, 872
Pfl23II	CGTACG	1 cut(s)	888
PkrI	GCNGC	5 cut(s)	115, 129, 386, 1139, 1222
PleI	GAGTC	1 cut(s)	259
PpsI	GAGTC	1 cut(s)	259
PsiI	TTATAA	1 cut(s)	656
Psp124BI	GAGCTC	1 cut(s)	198
Psp1406I	AACGTT	1 cut(s)	35
Psp6I	CCWGG	2 cut(s)	312, 717
PspGI	CCWGG	2 cut(s)	312, 717
PspLI	CGTACG	1 cut(s)	888
PspN4I	GGNNCC	5 cut(s)	213, 223, 311, 351, 681
PspOMI	GGGCCC	2 cut(s)	309, 679
PspPI	GGNCC	6 cut(s)	211, 309, 310, 679, 680, 1365
RsaI	GTAC	3 cut(s)	173, 890, 914
RsaNI	GTAC	3 cut(s)	172, 889, 913
RseI	CAYNNNNRTG	3 cut(s)	299, 756, 1447
SacI	GAGCTC	1 cut(s)	198
SalI	GTCGAC	1 cut(s)	4
SaqAI	TTAA	4 cut(s)	38, 392, 695, 1386
SatI	GCNGC	5 cut(s)	114, 128, 385, 1138, 1221
Sau3AI	GATC	1 cut(s)	325
Sau96I	GGNCC	6 cut(s)	211, 309, 310, 679, 680, 1365
SchI	GAGTC	1 cut(s)	260
ScrFI	CCNGG	3 cut(s)	215, 314, 719
SduI	GDGCHC	5 cut(s)	198, 224, 313, 683, 1014
SfaNI	GCATC	3 cut(s)	252, 1200, 1271
SinI	GGWCC	1 cut(s)	211
SmiMI	CAYNNNNRTG	3 cut(s)	299, 756, 1447
Sse9I	AATT	7 cut(s)	81, 628, 663, 692, 845, 851, 1387
SsiI	CCGC	5 cut(s)	106, 114, 159, 209, 387
SspI	AATATT	1 cut(s)	1400
SspMI	CTAG	5 cut(s)	333, 644, 1004, 1116, 1224
SstI	GAGCTC	1 cut(s)	198
StyD4I	CCNGG	3 cut(s)	213, 312, 717
StyI	CCWWGG	1 cut(s)	332
TaaI	ACNGT	3 cut(s)	226, 247, 893
TaiI	ACGT	2 cut(s)	38, 177
TaqI	TCGA	4 cut(s)	5, 43, 318, 591
TasI	AATT	7 cut(s)	81, 628, 663, 692, 845, 851, 1387
TauI	GCSGC	1 cut(s)	116
TfiI	GAWTC	5 cut(s)	45, 96, 397, 713, 872
Tru1I	TTAA	4 cut(s)	38, 392, 695, 1386
Tru9I	TTAA	4 cut(s)	38, 392, 695, 1386
TscAI	CASTG	1 cut(s)	174
TseFI	GTSAC	2 cut(s)	175, 252
TseI	GCWGC	4 cut(s)	127, 384, 1137, 1220
Tsp45I	GTSAC	2 cut(s)	175, 252
TspDTI	ATGAA	3 cut(s)	74, 598, 740
TspGWI	ACGGA	1 cut(s)	951
TspRI	CASTG	1 cut(s)	174
VpaK11BI	GGWCC	1 cut(s)	211
XagI	CCTNNNNNAGG	1 cut(s)	642
XapI	RAATTY	1 cut(s)	663
XceI	RCATGY	2 cut(s)	1111, 1446
XmaJI	CCTAGG	1 cut(s)	332
XmiI	GTMKAC	2 cut(s)	5, 204
XmnI	GAANNNNTTC	2 cut(s)	456, 1197
XspI	CTAG	5 cut(s)	333, 644, 1004, 1116, 1224
Zsp2I	ATGCAT	1 cut(s)	1444

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.