Rh2CG137700

Vesicle-associated protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
12146796 .. 12148519
1724 bp
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UTR
Exon/CDS
Intron
Rh2CG137700.1

Sequence Viewer

Length: 240 bp
ATGTCATACACGGGACGGGATTGTGAGGCAGGACATGTGGTTGAGGAGTGCAAATTCAGAGTGGTGTATGTTTCTCCACCTCAGCCCCCTTCTCCGGTCTCAGAAAGGTCGGAGGAAGGGTCTTCACCAAGAGCTTCAATAGTGGAGAATGAAAATCTTAATGCTGCTGAGATTTCCAATGCTGCAAAAGGACTTTCAGAGCAGCTTGAATCTCTGGAGAGATCCGCAGAGATGAAGTGA

Protein Analysis

79

Amino Acids

8.6

Weight (kDa)

4.68

Isoelectric Point (pI)

82.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 225
AclWI GGATC 1 cut(s) 216
AcsI RAATTY 1 cut(s) 53
AfiI CCNNNNNNNGG 1 cut(s) 94
AflIII ACRYGT 1 cut(s) 34
AgsI TTSAA 2 cut(s) 138, 209
AluBI AGCT 2 cut(s) 134, 205
AluI AGCT 2 cut(s) 134, 205
Alw26I GTCTC 1 cut(s) 103
AlwI GGATC 1 cut(s) 216
ApeKI GCWGC 3 cut(s) 164, 182, 202
ApoI RAATTY 1 cut(s) 53
AsuHPI GGTGA 1 cut(s) 117
BbsI GAAGAC 1 cut(s) 114
BbvCI CCTCAGC 1 cut(s) 81
BbvI GCAGC 3 cut(s) 151, 169, 214
BcoDI GTCTC 1 cut(s) 103
BisI GCNGC 3 cut(s) 165, 183, 203
BlsI GCNGC 3 cut(s) 166, 184, 204
BpiI GAAGAC 1 cut(s) 114
BpmI CTGGAG 1 cut(s) 236
Bpu10I CCTNAGC 1 cut(s) 81
BsaI GGTCTC 1 cut(s) 103
BsaWI WCCGGW 1 cut(s) 94
BsaXI ACNNNNNCTCC 2 cut(s) 104, 134
Bsc4I CCNNNNNNNGG 1 cut(s) 94
BseLI CCNNNNNNNGG 1 cut(s) 94
BseMII CTCAG 3 cut(s) 95, 114, 159
BseRI GAGGAG 1 cut(s) 59
BseXI GCAGC 3 cut(s) 151, 169, 214
BsiSI CCGG 1 cut(s) 95
BslFI GGGAC 1 cut(s) 27
BslI CCNNNNNNNGG 1 cut(s) 94
BsmAI GTCTC 1 cut(s) 103
BsmFI GGGAC 1 cut(s) 27
Bso31I GGTCTC 1 cut(s) 103
Bsp143I GATC 1 cut(s) 221
BspACI CCGC 1 cut(s) 225
BspCNI CTCAG 3 cut(s) 94, 113, 160
BspPI GGATC 1 cut(s) 216
BspTNI GGTCTC 1 cut(s) 103
BssMI GATC 1 cut(s) 221
BstDEI CTNAG 3 cut(s) 81, 100, 168
BstKTI GATC 1 cut(s) 224
BstMAI GTCTC 1 cut(s) 103
BstMBI GATC 1 cut(s) 221
BstNSI RCATGY 1 cut(s) 38
BstV1I GCAGC 3 cut(s) 151, 169, 214
BstV2I GAAGAC 1 cut(s) 114
BstX2I RGATCY 1 cut(s) 221
BstYI RGATCY 1 cut(s) 221
CviAII CATG 1 cut(s) 35
CviJI RGCY 3 cut(s) 85, 134, 205
CviKI_1 RGCY 3 cut(s) 85, 134, 205
DdeI CTNAG 3 cut(s) 81, 100, 168
DpnI GATC 1 cut(s) 223
DpnII GATC 1 cut(s) 221
Eco31I GGTCTC 1 cut(s) 103
FaeI CATG 1 cut(s) 38
FaiI YATR 3 cut(s) 7, 36, 69
FaqI GGGAC 1 cut(s) 27
FatI CATG 1 cut(s) 34
Fnu4HI GCNGC 3 cut(s) 165, 183, 203
Fsp4HI GCNGC 3 cut(s) 165, 183, 203
GluI GCNGC 3 cut(s) 165, 183, 203
GsuI CTGGAG 1 cut(s) 236
HapII CCGG 1 cut(s) 95
Hin1II CATG 1 cut(s) 38
HinfI GANTC 1 cut(s) 209
HpaII CCGG 1 cut(s) 95
HphI GGTGA 1 cut(s) 117
Hpy188I TCNGA 4 cut(s) 59, 103, 112, 199
Hpy188III TCNNGA 1 cut(s) 215
HpyAV CCTTC 2 cut(s) 99, 110
HpyCH4V TGCA 2 cut(s) 51, 185
HpyF3I CTNAG 3 cut(s) 81, 100, 168
Hsp92II CATG 1 cut(s) 38
Kzo9I GATC 1 cut(s) 221
LpnPI CCDG 3 cut(s) 15, 108, 200
Lsp1109I GCAGC 3 cut(s) 151, 169, 214
MalI GATC 1 cut(s) 223
MboI GATC 1 cut(s) 221
MboII GAAGA 1 cut(s) 114
MflI RGATCY 1 cut(s) 221
MluCI AATT 1 cut(s) 53
MmeI TCCRAC 1 cut(s) 90
MnlI CCTC 4 cut(s) 19, 37, 90, 106
MseI TTAA 1 cut(s) 159
MspI CCGG 1 cut(s) 95
NdeII GATC 1 cut(s) 221
NlaIII CATG 1 cut(s) 38
NspI RCATGY 1 cut(s) 38
PciI ACATGT 1 cut(s) 34
PfeI GAWTC 1 cut(s) 209
PkrI GCNGC 3 cut(s) 166, 184, 204
PscI ACATGT 1 cut(s) 34
PsuI RGATCY 1 cut(s) 221
SaqAI TTAA 1 cut(s) 159
SatI GCNGC 3 cut(s) 165, 183, 203
Sau3AI GATC 1 cut(s) 221
SetI ASST 4 cut(s) 82, 110, 136, 207
SgeI CNNG 9 cut(s) 22, 24, 29, 42, 47, 107, 141, 218, 227
Sse9I AATT 1 cut(s) 53
SsiI CCGC 1 cut(s) 225
TasI AATT 1 cut(s) 53
TfiI GAWTC 1 cut(s) 209
Tru1I TTAA 1 cut(s) 159
Tru9I TTAA 1 cut(s) 159
TseI GCWGC 3 cut(s) 164, 182, 202
TspDTI ATGAA 1 cut(s) 165
XapI RAATTY 1 cut(s) 53
XceI RCATGY 1 cut(s) 38
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.