Rw6G012410

Belongs to the AAA ATPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0004350
Physical Location & Seq
Reverse (-)
22584576 .. 22587523
2948 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G012410.1

Sequence Viewer

Length: 1206 bp
ATGACGTCGACAGAGACAGAGGACGCCGTACGACGTCGCACCGCCATCACCGATTACCGGAAGAGGCTGCTCCAGCACAAGGAGCTCGACTCCCGAGTCCGCGCAGTGCGGGAAAACTTGCGAGGAGCTAAGAAGGAGTTTGGGAAAACTGAAGATGATTTGAAGTCGCTTCAAAGCGTTGGTCAGATTATAGGGGAAGTTCTGAGACCTCTCGATAATGAACGCTTGATAGTGAAGGCGAGTAGTGGCCCTAGGTATGTGGTTGGCTGTCGCAGTAAAGTGGACAAAGAAAAACTGACAGCGGGCACTCGGGTTGTTTTGGATATGACTACTCTGACTATCATGAGGGCTCTTCCAAGAGAGGTTGATCCAGTAGTGTATAATATGCTTCATGAAGATCCCGGTAATGTTAGCTACTCCGCTGTGGGAGGGCTAGGAGACCAGATCCGGGAGCTTAGGGAATCTATAGAGCTGCCTCTAATGAACCCTGAGCTCTTCCTTAGAGTGGCATCAAACCACCCAAGGTGTGGTGTTCTTCTCTATGGACCTCCGGGTACAGGGAAGACATTGCTAGCCAGAGCAATTGCGAGCAACATAGATGCTAACTTTCTAAAGGTTGTATCAAGCGCCATTATTGATAAGTACATTGGTGAAAGTGCAAGATTGATAAGGGAAATGTTTGGTTATGCTCGTGATCACCAGCCCTGTATCATTTTTATGGATGAGATCGATGCCATCGGTGGACGGCGTTTTAGCGAAGGGACCAGTGCAGACCGTGAAATCCAGCGAACACTCATGGAGTTGCTTAACCAGTTAGATGGATTTGATCAACTTGGGAAGGTGAAAATGATAATGGCAACAAATAGACCTGATGTTTTAGATCCTGCACTTCTCCGACCTGGGAGACTAGACCGGAAAATAGAGATTCCATTGCCTAATGAACAGTCAAGAATGGAAATTCTTAAAATTCATGCTGCTGGAATAGCTAAACATGGGGAAATTGATTATGAGGCAGTTGTGAAGCTTGCTGAGGGCTTTAACGGAGCAGATCTGCGGAATGTCTGCACTGAAGCTGGGATGTCTGCGATCCGTGCTGAACGCGATTATGTCATTCATGAAGACTTCATGAAGGCTGTAAGAAAATTGAACGAAGCCAAGAAGCTGGAATCAAGCGCACACTATAATGCTGATTTTGGAAAGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000502 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005838 GO:0005886 GO:0005911 GO:0006355 GO:0006357 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0008134 GO:0008150 GO:0008152 GO:0008540 GO:0009056 GO:0009057 GO:0009506 GO:0009889 GO:0009891 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010243 GO:0010468 GO:0010498 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017025 GO:0017111 GO:0019219 GO:0019222 GO:0019538 GO:0019941 GO:0022624 GO:0030054 GO:0030162 GO:0030163 GO:0030312 GO:0030433 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031329 GO:0031331 GO:0031334 GO:0031595 GO:0031597 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032991 GO:0033554 GO:0034976 GO:0036402 GO:0036503 GO:0042176 GO:0042221 GO:0042623 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043254 GO:0043632 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0045732 GO:0045862 GO:0045893 GO:0045898 GO:0045899 GO:0045935 GO:0045944 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051603 GO:0051716 GO:0055044 GO:0060255 GO:0060260 GO:0060261 GO:0061136 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901800 GO:1902494 GO:1902680 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1903506 GO:1903508 GO:1905368 GO:1905369 GO:2000112 GO:2000142 GO:2000144 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03050 ko05169 map03050 map05169
Pfam Domains
Protein Families
AAA

Protein Analysis

401

Amino Acids

44.9

Weight (kDa)

7.69

Isoelectric Point (pI)

36.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Prot_ATP_ID_OB_C PF16450 64 - 119 1e-14 Proteasomal ATPase OB C-terminal domain
RuvB_N PF05496 177 - 244 7.7e-06 Holliday junction DNA helicase RuvB P-loop domain
AAA PF00004 178 - 311 1.3e-43 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 334 - 376 1.5e-12 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 95
AatII GACGTC 2 cut(s) 8, 37
AccB7I CCANNNNNTGG 1 cut(s) 527
AccI GTMKAC 1 cut(s) 8
AccII CGCG 2 cut(s) 102, 1101
AciI CCGC 6 cut(s) 42, 100, 109, 302, 420, 1054
AclWI GGATC 5 cut(s) 362, 392, 439, 875, 1081
AcsI RAATTY 2 cut(s) 957, 966
AcuI CTGAAG 2 cut(s) 171, 1089
AcyI GRCGYC 3 cut(s) 5, 24, 34
AfaI GTAC 3 cut(s) 30, 556, 644
AfiI CCNNNNNNNGG 6 cut(s) 57, 79, 448, 505, 527, 557
AgsI TTSAA 3 cut(s) 163, 173, 1147
AjnI CCWGG 1 cut(s) 898
Alw21I GWGCWC 2 cut(s) 87, 495
Alw26I GTCTC 4 cut(s) 8, 199, 432, 898
AlwI GGATC 5 cut(s) 362, 392, 439, 875, 1081
Ama87I CYCGRG 2 cut(s) 93, 309
AoxI GGCC 1 cut(s) 247
ApeKI GCWGC 3 cut(s) 67, 472, 974
ApoI RAATTY 2 cut(s) 957, 966
ArsI GACNNNNNNTTYG 2 cut(s) 166, 198
AspA2I CCTAGG 1 cut(s) 251
AspLEI GCGC 3 cut(s) 104, 629, 1175
AspS9I GGNCC 3 cut(s) 248, 545, 762
AsuC2I CCSGG 3 cut(s) 402, 449, 552
AsuHPI GGTGA 4 cut(s) 40, 662, 689, 853
AsuNHI GCTAGC 1 cut(s) 571
AvaI CYCGRG 2 cut(s) 93, 309
AvaII GGWCC 2 cut(s) 545, 762
AvrII CCTAGG 1 cut(s) 251
BaeGI GKGCMC 1 cut(s) 308
BanII GRGCYC 3 cut(s) 87, 352, 495
BauI CACGAG 1 cut(s) 690
BbsI GAAGAC 2 cut(s) 569, 1125
Bbv12I GWGCWC 2 cut(s) 87, 495
BbvCI CCTCAGC 1 cut(s) 1029
BbvI GCAGC 3 cut(s) 54, 459, 961
BccI CCATC 3 cut(s) 53, 743, 812
BceAI ACGGC 2 cut(s) 11, 761
BciT130I CCWGG 1 cut(s) 900
BclI TGATCA 2 cut(s) 694, 826
BcnI CCSGG 3 cut(s) 402, 449, 552
BcoDI GTCTC 4 cut(s) 8, 199, 432, 898
BfaI CTAG 4 cut(s) 252, 434, 572, 908
BfmI CTRYAG 1 cut(s) 465
BfoI RGCGCY 1 cut(s) 630
BglII AGATCT 1 cut(s) 1048
BisI GCNGC 3 cut(s) 68, 473, 975
BlnI CCTAGG 1 cut(s) 251
BlsI GCNGC 3 cut(s) 69, 474, 976
Bme1390I CCNGG 4 cut(s) 402, 449, 552, 900
Bme18I GGWCC 2 cut(s) 545, 762
BmeT110I CYCGRG 2 cut(s) 93, 309
BmgT120I GGNCC 3 cut(s) 248, 545, 762
BmiI GGNNCC 1 cut(s) 763
BmrFI CCNGG 4 cut(s) 402, 449, 552, 900
BmsI GCATC 3 cut(s) 518, 589, 721
BmtI GCTAGC 1 cut(s) 575
BpiI GAAGAC 2 cut(s) 569, 1125
BplI GAGNNNNNCTC 2 cut(s) 74, 106
BpmI CTGGAG 1 cut(s) 56
Bpu10I CCTNAGC 3 cut(s) 455, 489, 1029
BpuMI CCSGG 3 cut(s) 402, 449, 552
Bsa29I ATCGAT 1 cut(s) 729
BsaHI GRCGYC 3 cut(s) 5, 24, 34
BsaI GGTCTC 2 cut(s) 199, 432
BsaJI CCNNGG 3 cut(s) 251, 521, 899
BsaWI WCCGGW 2 cut(s) 57, 912
Bsc4I CCNNNNNNNGG 6 cut(s) 57, 79, 448, 505, 527, 557
Bse1I ACTGG 3 cut(s) 371, 765, 811
Bse3DI GCAATG 2 cut(s) 566, 929
BseBI CCWGG 1 cut(s) 900
BseCI ATCGAT 1 cut(s) 729
BseDI CCNNGG 3 cut(s) 251, 521, 899
BseGI GGATG 2 cut(s) 727, 1083
BseLI CCNNNNNNNGG 6 cut(s) 57, 79, 448, 505, 527, 557
BseMI GCAATG 2 cut(s) 566, 929
BseMII CTCAG 3 cut(s) 194, 480, 1020
BseNI ACTGG 3 cut(s) 371, 765, 811
BseRI GAGGAG 1 cut(s) 138
BseSI GKGCMC 1 cut(s) 308
BseXI GCAGC 3 cut(s) 54, 459, 961
BseYI CCCAGC 1 cut(s) 1073
BsgI GTGCAG 3 cut(s) 789, 870, 1048
Bsh1236I CGCG 2 cut(s) 102, 1101
BshFI GGCC 1 cut(s) 249
BshVI ATCGAT 1 cut(s) 729
BsiHKAI GWGCWC 2 cut(s) 87, 495
BsiHKCI CYCGRG 2 cut(s) 93, 309
BsiSI CCGG 5 cut(s) 58, 402, 448, 551, 913
BsiWI CGTACG 1 cut(s) 28
BslFI GGGAC 1 cut(s) 775
BslI CCNNNNNNNGG 6 cut(s) 57, 79, 448, 505, 527, 557
BsmAI GTCTC 4 cut(s) 8, 199, 432, 898
BsmFI GGGAC 1 cut(s) 775
BsnI GGCC 1 cut(s) 249
Bso31I GGTCTC 2 cut(s) 199, 432
BsoBI CYCGRG 2 cut(s) 93, 309
Bsp1286I GDGCHC 4 cut(s) 87, 308, 352, 495
Bsp143I GATC 9 cut(s) 367, 397, 444, 694, 726, 826, 880, 1048, 1086
BspACI CCGC 6 cut(s) 42, 100, 109, 302, 420, 1054
BspANI GGCC 1 cut(s) 249
BspCNI CTCAG 3 cut(s) 195, 481, 1021
BspDI ATCGAT 1 cut(s) 729
BspFNI CGCG 2 cut(s) 102, 1101
BspHI TCATGA 4 cut(s) 342, 391, 1114, 1125
BspLI GGNNCC 1 cut(s) 763
BspOI GCTAGC 1 cut(s) 575
BspPI GGATC 5 cut(s) 362, 392, 439, 875, 1081
BspQI GCTCTTC 2 cut(s) 357, 500
BspTNI GGTCTC 2 cut(s) 199, 432
BsrDI GCAATG 2 cut(s) 566, 929
BsrI ACTGG 3 cut(s) 371, 765, 811
BssECI CCNNGG 3 cut(s) 251, 521, 899
BssMI GATC 9 cut(s) 367, 397, 444, 694, 726, 826, 880, 1048, 1086
BssNI GRCGYC 3 cut(s) 5, 24, 34
BssSI CACGAG 1 cut(s) 690
BssT1I CCWWGG 2 cut(s) 251, 521
Bst2BI CACGAG 1 cut(s) 690
Bst2UI CCWGG 1 cut(s) 900
Bst4CI ACNGT 2 cut(s) 776, 945
Bst6I CTCTTC 3 cut(s) 56, 357, 500
BstACI GRCGYC 3 cut(s) 5, 24, 34
BstC8I GCNNGC 4 cut(s) 304, 573, 589, 1026
BstDEI CTNAG 6 cut(s) 129, 203, 455, 489, 500, 1029
BstF5I GGATG 2 cut(s) 727, 1083
BstFNI CGCG 2 cut(s) 102, 1101
BstH2I RGCGCY 1 cut(s) 630
BstHHI GCGC 3 cut(s) 104, 629, 1175
BstKTI GATC 9 cut(s) 370, 400, 447, 697, 729, 829, 883, 1051, 1089
BstMAI GTCTC 4 cut(s) 8, 199, 432, 898
BstMBI GATC 9 cut(s) 367, 397, 444, 694, 726, 826, 880, 1048, 1086
BstMWI GCNNNNNNNGC 4 cut(s) 73, 82, 983, 1091
BstNI CCWGG 1 cut(s) 900
BstSCI CCNGG 4 cut(s) 400, 447, 550, 898
BstSFI CTRYAG 1 cut(s) 465
BstSLI GKGCMC 1 cut(s) 308
BstUI CGCG 2 cut(s) 102, 1101
BstV1I GCAGC 3 cut(s) 54, 459, 961
BstV2I GAAGAC 2 cut(s) 569, 1125
BstX2I RGATCY 4 cut(s) 397, 444, 880, 1048
BstXI CCANNNNNNTGG 2 cut(s) 818, 1162
BstYI RGATCY 4 cut(s) 397, 444, 880, 1048
Bsu15I ATCGAT 1 cut(s) 729
BsuRI GGCC 1 cut(s) 249
BsuTUI ATCGAT 1 cut(s) 729
BtsCI GGATG 2 cut(s) 727, 1083
BtsI GCAGTG 1 cut(s) 111
BtsIMutI CAGTG 3 cut(s) 111, 772, 1065
Cac8I GCNNGC 4 cut(s) 304, 573, 589, 1026
CciI TCATGA 4 cut(s) 342, 391, 1114, 1125
CfoI GCGC 3 cut(s) 104, 629, 1175
Cfr13I GGNCC 3 cut(s) 248, 545, 762
ClaI ATCGAT 1 cut(s) 729
CseI GACGC 1 cut(s) 32
Csp6I GTAC 3 cut(s) 29, 555, 643
CviAII CATG 7 cut(s) 343, 392, 796, 971, 992, 1115, 1126
CviQI GTAC 3 cut(s) 29, 555, 643
DdeI CTNAG 6 cut(s) 129, 203, 455, 489, 500, 1029
DpnI GATC 9 cut(s) 369, 399, 446, 696, 728, 828, 882, 1050, 1088
DpnII GATC 9 cut(s) 367, 397, 444, 694, 726, 826, 880, 1048, 1086
DrdI GACNNNNNNGTC 1 cut(s) 95
DseDI GACNNNNNNGTC 1 cut(s) 95
Eam1104I CTCTTC 3 cut(s) 56, 357, 500
EarI CTCTTC 3 cut(s) 56, 357, 500
Ecl136II GAGCTC 2 cut(s) 85, 493
Eco130I CCWWGG 2 cut(s) 251, 521
Eco24I GRGCYC 3 cut(s) 87, 352, 495
Eco31I GGTCTC 2 cut(s) 199, 432
Eco47I GGWCC 2 cut(s) 545, 762
Eco53kI GAGCTC 2 cut(s) 85, 493
Eco57I CTGAAG 2 cut(s) 171, 1089
Eco88I CYCGRG 2 cut(s) 93, 309
EcoICRI GAGCTC 2 cut(s) 85, 493
EcoRII CCWGG 1 cut(s) 898
EcoT14I CCWWGG 2 cut(s) 251, 521
EcoT38I GRGCYC 3 cut(s) 87, 352, 495
ErhI CCWWGG 2 cut(s) 251, 521
FaeI CATG 7 cut(s) 346, 395, 799, 974, 995, 1118, 1129
FaqI GGGAC 1 cut(s) 775
FatI CATG 7 cut(s) 342, 391, 795, 970, 991, 1114, 1125
FauI CCCGC 2 cut(s) 102, 295
FbaI TGATCA 2 cut(s) 694, 826
FblI GTMKAC 1 cut(s) 8
Fnu4HI GCNGC 3 cut(s) 68, 473, 975
FokI GGATG 2 cut(s) 734, 1090
FriOI GRGCYC 3 cut(s) 87, 352, 495
Fsp4HI GCNGC 3 cut(s) 68, 473, 975
FspBI CTAG 4 cut(s) 252, 434, 572, 908
GlaI GCGC 3 cut(s) 103, 628, 1174
GluI GCNGC 3 cut(s) 68, 473, 975
GsaI CCCAGC 1 cut(s) 1077
GsuI CTGGAG 1 cut(s) 56
HaeII RGCGCY 1 cut(s) 630
HaeIII GGCC 1 cut(s) 249
HapII CCGG 5 cut(s) 58, 402, 448, 551, 913
HgaI GACGC 1 cut(s) 32
HhaI GCGC 3 cut(s) 104, 629, 1175
Hin1I GRCGYC 3 cut(s) 5, 24, 34
Hin1II CATG 7 cut(s) 346, 395, 799, 974, 995, 1118, 1129
Hin6I GCGC 3 cut(s) 102, 627, 1173
HinP1I GCGC 3 cut(s) 102, 627, 1173
HincII GTYRAC 1 cut(s) 9
HindII GTYRAC 1 cut(s) 9
HindIII AAGCTT 1 cut(s) 1022
HinfI GANTC 5 cut(s) 89, 96, 461, 925, 1166
HpaII CCGG 5 cut(s) 58, 402, 448, 551, 913
HphI GGTGA 4 cut(s) 40, 662, 689, 853
Hpy166II GTNNAC 3 cut(s) 9, 283, 743
Hpy188I TCNGA 4 cut(s) 186, 204, 336, 896
Hpy188III TCNNGA 8 cut(s) 93, 212, 343, 392, 692, 948, 1115, 1126
Hpy8I GTNNAC 3 cut(s) 9, 283, 743
Hpy99I CGWCG 3 cut(s) 10, 36, 39
HpyAV CCTTC 5 cut(s) 127, 229, 752, 832, 1123
HpyCH4III ACNGT 2 cut(s) 776, 945
HpyCH4IV ACGT 2 cut(s) 5, 34
HpyCH4V TGCA 4 cut(s) 659, 770, 887, 1065
HpyF10VI GCNNNNNNNGC 4 cut(s) 73, 82, 983, 1091
HpyF3I CTNAG 6 cut(s) 129, 203, 455, 489, 500, 1029
HpySE526I ACGT 2 cut(s) 5, 34
Hsp92I GRCGYC 3 cut(s) 5, 24, 34
Hsp92II CATG 7 cut(s) 346, 395, 799, 974, 995, 1118, 1129
HspAI GCGC 3 cut(s) 102, 627, 1173
Ksp22I TGATCA 2 cut(s) 694, 826
Kzo9I GATC 9 cut(s) 367, 397, 444, 694, 726, 826, 880, 1048, 1086
LguI GCTCTTC 2 cut(s) 357, 500
LmnI GCTCC 5 cut(s) 75, 82, 125, 451, 1043
Lsp1109I GCAGC 3 cut(s) 54, 459, 961
LweI GCATC 3 cut(s) 518, 589, 721
MaeI CTAG 4 cut(s) 252, 434, 572, 908
MaeII ACGT 2 cut(s) 5, 34
MalI GATC 9 cut(s) 369, 399, 446, 696, 728, 828, 882, 1050, 1088
MboI GATC 9 cut(s) 367, 397, 444, 694, 726, 826, 880, 1048, 1086
MboII GAAGA 8 cut(s) 73, 164, 344, 407, 487, 527, 574, 1130
MfeI CAATTG 1 cut(s) 582
MflI RGATCY 4 cut(s) 397, 444, 880, 1048
MhlI GDGCHC 4 cut(s) 87, 308, 352, 495
MluCI AATT 5 cut(s) 582, 957, 966, 999, 1142
MlyI GAGTC 2 cut(s) 83, 105
MmeI TCCRAC 1 cut(s) 919
MseI TTAA 3 cut(s) 807, 963, 1038
MslI CAYNNNNRTG 2 cut(s) 716, 1182
MspA1I CMGCKG 2 cut(s) 302, 422
MspI CCGG 5 cut(s) 58, 402, 448, 551, 913
MspR9I CCNGG 4 cut(s) 402, 449, 552, 900
MunI CAATTG 1 cut(s) 582
MvaI CCWGG 1 cut(s) 900
MvnI CGCG 2 cut(s) 102, 1101
MwoI GCNNNNNNNGC 4 cut(s) 73, 82, 983, 1091
NciI CCSGG 3 cut(s) 402, 449, 552
NdeII GATC 9 cut(s) 367, 397, 444, 694, 726, 826, 880, 1048, 1086
NheI GCTAGC 1 cut(s) 571
NlaIII CATG 7 cut(s) 346, 395, 799, 974, 995, 1118, 1129
NlaIV GGNNCC 1 cut(s) 763
PagI TCATGA 4 cut(s) 342, 391, 1114, 1125
PciSI GCTCTTC 2 cut(s) 357, 500
PfeI GAWTC 3 cut(s) 461, 925, 1166
Pfl23II CGTACG 1 cut(s) 28
PflMI CCANNNNNTGG 1 cut(s) 527
PfoI TCCNGGA 1 cut(s) 447
PkrI GCNGC 3 cut(s) 69, 474, 976
PleI GAGTC 2 cut(s) 83, 104
PpsI GAGTC 2 cut(s) 83, 104
Psp124BI GAGCTC 2 cut(s) 87, 495
Psp6I CCWGG 1 cut(s) 898
PspFI CCCAGC 1 cut(s) 1073
PspGI CCWGG 1 cut(s) 898
PspLI CGTACG 1 cut(s) 28
PspN4I GGNNCC 1 cut(s) 763
PspPI GGNCC 3 cut(s) 248, 545, 762
PsuI RGATCY 4 cut(s) 397, 444, 880, 1048
RsaI GTAC 3 cut(s) 30, 556, 644
RsaNI GTAC 3 cut(s) 29, 555, 643
RseI CAYNNNNRTG 2 cut(s) 716, 1182
SacI GAGCTC 2 cut(s) 87, 495
SalI GTCGAC 1 cut(s) 7
SapI GCTCTTC 2 cut(s) 357, 500
SaqAI TTAA 3 cut(s) 807, 963, 1038
SatI GCNGC 3 cut(s) 68, 473, 975
Sau3AI GATC 9 cut(s) 367, 397, 444, 694, 726, 826, 880, 1048, 1086
Sau96I GGNCC 3 cut(s) 248, 545, 762
SchI GAGTC 2 cut(s) 83, 105
ScrFI CCNGG 4 cut(s) 402, 449, 552, 900
SduI GDGCHC 4 cut(s) 87, 308, 352, 495
SfaNI GCATC 3 cut(s) 518, 589, 721
SfcI CTRYAG 1 cut(s) 465
SinI GGWCC 2 cut(s) 545, 762
SmiMI CAYNNNNRTG 2 cut(s) 716, 1182
Sse9I AATT 5 cut(s) 582, 957, 966, 999, 1142
SsiI CCGC 6 cut(s) 42, 100, 109, 302, 420, 1054
SspMI CTAG 4 cut(s) 252, 434, 572, 908
SstI GAGCTC 2 cut(s) 87, 495
StyD4I CCNGG 4 cut(s) 400, 447, 550, 898
StyI CCWWGG 2 cut(s) 251, 521
TaaI ACNGT 2 cut(s) 776, 945
TaiI ACGT 2 cut(s) 8, 37
TaqI TCGA 4 cut(s) 8, 87, 213, 729
TasI AATT 5 cut(s) 582, 957, 966, 999, 1142
TatI WGTACW 1 cut(s) 642
TfiI GAWTC 3 cut(s) 461, 925, 1166
Tru1I TTAA 3 cut(s) 807, 963, 1038
Tru9I TTAA 3 cut(s) 807, 963, 1038
TscAI CASTG 3 cut(s) 111, 772, 1072
TseI GCWGC 3 cut(s) 67, 472, 974
TspGWI ACGGA 2 cut(s) 1056, 1079
TspRI CASTG 3 cut(s) 111, 772, 1072
Van91I CCANNNNNTGG 1 cut(s) 527
VpaK11BI GGWCC 2 cut(s) 545, 762
XapI RAATTY 2 cut(s) 957, 966
XcmI CCANNNNNNNNNTGG 1 cut(s) 524
XmaJI CCTAGG 1 cut(s) 251
XmiI GTMKAC 1 cut(s) 8
XspI CTAG 4 cut(s) 252, 434, 572, 908
ZraI GACGTC 2 cut(s) 6, 35
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.