Rw7G031180

Sterol 3-beta-glucosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0014580
Physical Location & Seq
Forward (+)
44486202 .. 44494482
8281 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G031180.1

Sequence Viewer

Length: 1233 bp
ATGGAGGTTGAGACGGAGAGGACGAAACCCGTTGCTGTATTCATGGCTTTCGGTACCAAAGGCGATGTCTATCCAATTGCTGCCATTGCGGCGGCCTTTGCTTCCGACCAGAGACAGTACCAAGTTGTTCTTATCACACATTCAGCTCACGAGAGCTTACGTTTTCACTTGGCTGAGAAGCATGTTTACTATCTTCCAATTTCATCACCACCTGTTCTCTCTATCCATCAGAAACATGATACTACAGGCTCTGTAGAGTTGCCTCTTTCACTGCAGAAAAAGTTGTTTTCTGGAGAACATAGAAAAGAATGTCTTTCGGTAGTTGAAACGATATTTGGATCAGGCCCAAGCATGGATGGTGATTTCATTGTGATAAATTTCTTTGCTCTGGAAGGCTGGAGCCTTGCGGAGCTTTTCCGTGTCCGCTGCATGGTTGCTGCTCCTTATGTTGTTCCATACAGTGCACCTTCATCATTTGAGCGCCAGTTTAAAAAGGAATATCAACACTTGTATAGATACCTGCAGGAACCTAACCTCAGGAAGGTTGGTTGGAAAGACGTGATCCACTGGATGTGGCCTCTTTTCACTGAACACTGGGGATCCTGGAGATGTGACCATTTGAATCTGAGTGCTTTCCCTTTTACAGATCCAGTAACAGGTCTCCCCACTTGGCATGACAGGCTACTGTCTCCCCGACTTTTGTATGGTTTTAGCAAAGAAGTTGTTGAGTGCCCAGAATACTGGCCATCGAGCATTCGGGTTTGTGGCTTTTGGTTTCTGCCTAATGAATGGCAATTTTCATGTAAGAAGTGCAGTGAAATTTCAAGGCTTGTTTCTTCAGGGGATCTGTACACAAATGGTGAACTGTGCCCAGCTCATGTTCACTTGCAATATTTTCTGAAGACTCCTACGCCTATGCCACCTGTTTTTATTGGCCTGAATTCTATTGGTAGCATGGGATTTTTGAAGAATCCTCAAGCATTTCTTCGTATCCTTGAATCTGTCCTCAAGATAACAACTTATCGTTTTATCCTTTTTACTGCTGGCTACAAGCCTTTAGATGCAGCAATCCAAGCTATTGCTGCTGATTCATCATCGCACATGACCCACAAACAGATTAATGACGATTGCGTTTCTCTCTTCCACGAACGATTGTTCTGCTTTTCTGGTTCTATACCATACACGTGGCTGTTTTCTGGATGTGCGGCTGCAATTCATCATGGGGGAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

410

Amino Acids

46.72

Weight (kDa)

7.29

Isoelectric Point (pI)

34.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014580)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G24750
fragaria_vesca FvH4_5g30191 FvH4_5g30191
malus_domestica MD08G1224800.v1.1
prunus_persica Prupe.1G562100_v2.0.a1
pyrus_communis pycom08g19590
rosa_chinensis RchiOBHm_Chr7g0224451
rosa_laevigata RLG00000001894
rosa_multiflora Rmu_sc0003894.1_g000001
rosa_roxburghii Rroxscaffold_3G00234750
rosa_rugosa Rorug07G0223300 Rorug07G0223400
rosa_samantha Rh7AG379900 Rh7BG359500 Rh7CG399400 Rh7DG369100
rosa_wichuraiana Rw7G031180

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 528
Acc65I GGTACC 1 cut(s) 53
AccB1I GGYRCC 1 cut(s) 53
AciI CCGC 5 cut(s) 89, 92, 407, 424, 1205
AclWI GGATC 6 cut(s) 346, 556, 594, 607, 641, 852
AcoI YGGCCR 1 cut(s) 743
AcsI RAATTY 3 cut(s) 376, 819, 940
AcuI CTGAAG 2 cut(s) 822, 920
AcvI CACGTG 1 cut(s) 1185
AfaI GTAC 3 cut(s) 55, 119, 851
AfiI CCNNNNNNNGG 4 cut(s) 352, 430, 541, 656
AflIII ACRYGT 1 cut(s) 1182
AgsI TTSAA 5 cut(s) 326, 622, 825, 967, 998
AjiI CACGTC 1 cut(s) 559
AjnI CCWGG 1 cut(s) 602
AjuI GAANNNNNNNTTGG 2 cut(s) 318, 350
AluBI AGCT 5 cut(s) 146, 156, 412, 875, 1076
AluI AGCT 5 cut(s) 146, 156, 412, 875, 1076
Alw21I GWGCWC 1 cut(s) 466
Alw26I GTCTC 4 cut(s) 5, 106, 665, 693
Alw44I GTGCAC 1 cut(s) 462
AlwI GGATC 6 cut(s) 346, 556, 594, 607, 641, 852
AlwNI CAGNNNCTG 1 cut(s) 251
AoxI GGCC 5 cut(s) 93, 343, 575, 743, 934
ApaLI GTGCAC 1 cut(s) 462
ApeKI GCWGC 6 cut(s) 80, 426, 437, 1064, 1082, 1208
ApoI RAATTY 3 cut(s) 376, 819, 940
ArsI GACNNNNNNTTYG 2 cut(s) 51, 83
AseI ATTAAT 1 cut(s) 1119
Asp718I GGTACC 1 cut(s) 53
AspLEI GCGC 1 cut(s) 483
AspS9I GGNCC 1 cut(s) 344
AsuHPI GGTGA 3 cut(s) 198, 371, 872
AxyI CCTNAGG 1 cut(s) 536
BaeGI GKGCMC 3 cut(s) 466, 734, 872
BalI TGGCCA 1 cut(s) 745
BamHI GGATCC 1 cut(s) 599
BanI GGYRCC 1 cut(s) 53
BarI GAAGNNNNNNTAC 2 cut(s) 170, 202
BauI CACGAG 1 cut(s) 149
BbrPI CACGTG 1 cut(s) 1185
BbsI GAAGAC 1 cut(s) 908
Bbv12I GWGCWC 1 cut(s) 466
BbvI GCAGC 6 cut(s) 67, 413, 424, 1069, 1076, 1195
BccI CCATC 3 cut(s) 234, 350, 754
BcgI CGANNNNNNTGC 2 cut(s) 1140, 1174
BciT130I CCWGG 1 cut(s) 604
BciVI GTATCC 1 cut(s) 1001
BcoDI GTCTC 4 cut(s) 5, 106, 665, 693
BfmI CTRYAG 4 cut(s) 243, 252, 272, 521
BfoI RGCGCY 1 cut(s) 484
BfuAI ACCTGC 1 cut(s) 528
BfuI GTATCC 1 cut(s) 1001
BglI GCCNNNNNGGC 1 cut(s) 89
BisI GCNGC 9 cut(s) 81, 90, 93, 427, 438, 1065, 1083, 1206, 1209
BlsI GCNGC 9 cut(s) 82, 91, 94, 428, 439, 1066, 1084, 1207, 1210
Bme1390I CCNGG 1 cut(s) 604
BmgBI CACGTC 1 cut(s) 559
BmgT120I GGNCC 1 cut(s) 344
BmiI GGNNCC 4 cut(s) 55, 401, 528, 601
BmrFI CCNGG 1 cut(s) 604
BmrI ACTGGG 1 cut(s) 604
BmsI GCATC 1 cut(s) 1051
BmuI ACTGGG 1 cut(s) 604
BpiI GAAGAC 1 cut(s) 908
BpmI CTGGAG 3 cut(s) 312, 418, 625
BpuEI CTTGAG 2 cut(s) 960, 992
BsaAI YACGTR 1 cut(s) 1185
BsaBI GATNNNNATC 1 cut(s) 69
BsaI GGTCTC 1 cut(s) 665
Bsc4I CCNNNNNNNGG 4 cut(s) 352, 430, 541, 656
Bse1I ACTGG 5 cut(s) 484, 572, 599, 650, 746
Bse21I CCTNAGG 1 cut(s) 536
Bse3DI GCAATG 1 cut(s) 84
Bse8I GATNNNNATC 1 cut(s) 69
BseBI CCWGG 1 cut(s) 604
BseGI GGATG 3 cut(s) 361, 576, 1205
BseJI GATNNNNATC 1 cut(s) 69
BseLI CCNNNNNNNGG 4 cut(s) 352, 430, 541, 656
BseMI GCAATG 1 cut(s) 84
BseMII CTCAG 3 cut(s) 165, 550, 617
BseNI ACTGG 5 cut(s) 484, 572, 599, 650, 746
BseSI GKGCMC 3 cut(s) 466, 734, 872
BseXI GCAGC 6 cut(s) 67, 413, 424, 1069, 1076, 1195
BseYI CCCAGC 1 cut(s) 871
BsgI GTGCAG 1 cut(s) 832
BshFI GGCC 5 cut(s) 95, 345, 577, 745, 936
BshNI GGYRCC 1 cut(s) 53
BsiHKAI GWGCWC 1 cut(s) 466
BslI CCNNNNNNNGG 4 cut(s) 352, 430, 541, 656
BsmAI GTCTC 4 cut(s) 5, 106, 665, 693
BsmBI CGTCTC 1 cut(s) 5
BsmI GAATGC 1 cut(s) 753
BsnI GGCC 5 cut(s) 95, 345, 577, 745, 936
Bso31I GGTCTC 1 cut(s) 665
Bsp1286I GDGCHC 3 cut(s) 466, 734, 872
Bsp1407I TGTACA 1 cut(s) 849
Bsp143I GATC 5 cut(s) 338, 561, 599, 646, 844
BspACI CCGC 5 cut(s) 89, 92, 407, 424, 1205
BspANI GGCC 5 cut(s) 95, 345, 577, 745, 936
BspCNI CTCAG 3 cut(s) 166, 549, 618
BspLI GGNNCC 4 cut(s) 55, 401, 528, 601
BspMAI CTGCAG 2 cut(s) 276, 525
BspMI ACCTGC 1 cut(s) 528
BspPI GGATC 6 cut(s) 346, 556, 594, 607, 641, 852
BspT107I GGYRCC 1 cut(s) 53
BspTNI GGTCTC 1 cut(s) 665
BsrDI GCAATG 1 cut(s) 84
BsrGI TGTACA 1 cut(s) 849
BsrI ACTGG 5 cut(s) 484, 572, 599, 650, 746
BssMI GATC 5 cut(s) 338, 561, 599, 646, 844
BssSI CACGAG 1 cut(s) 149
Bst2BI CACGAG 1 cut(s) 149
Bst2UI CCWGG 1 cut(s) 604
Bst4CI ACNGT 4 cut(s) 117, 461, 687, 867
Bst6I CTCTTC 1 cut(s) 1145
BstAUI TGTACA 1 cut(s) 849
BstBAI YACGTR 1 cut(s) 1185
BstC8I GCNNGC 1 cut(s) 1045
BstDEI CTNAG 3 cut(s) 174, 536, 626
BstENI CCTNNNNNAGG 1 cut(s) 539
BstF5I GGATG 3 cut(s) 361, 576, 1205
BstH2I RGCGCY 1 cut(s) 484
BstHHI GCGC 1 cut(s) 483
BstKTI GATC 5 cut(s) 341, 564, 602, 649, 847
BstMAI GTCTC 4 cut(s) 5, 106, 665, 693
BstMBI GATC 5 cut(s) 338, 561, 599, 646, 844
BstMWI GCNNNNNNNGC 6 cut(s) 86, 89, 98, 679, 1073, 1082
BstNI CCWGG 1 cut(s) 604
BstNSI RCATGY 1 cut(s) 185
BstSCI CCNGG 1 cut(s) 602
BstSFI CTRYAG 4 cut(s) 243, 252, 272, 521
BstSLI GKGCMC 3 cut(s) 466, 734, 872
BstV1I GCAGC 6 cut(s) 67, 413, 424, 1069, 1076, 1195
BstV2I GAAGAC 1 cut(s) 908
BstX2I RGATCY 3 cut(s) 599, 646, 844
BstXI CCANNNNNNTGG 2 cut(s) 741, 1185
BstYI RGATCY 3 cut(s) 599, 646, 844
Bsu36I CCTNAGG 1 cut(s) 536
BsuI GTATCC 1 cut(s) 1001
BsuRI GGCC 5 cut(s) 95, 345, 577, 745, 936
BtgZI GCGATG 2 cut(s) 78, 1080
BtrI CACGTC 1 cut(s) 559
BtsCI GGATG 3 cut(s) 361, 576, 1205
BtsI GCAGTG 2 cut(s) 269, 820
BtsIMutI CAGTG 6 cut(s) 269, 466, 565, 585, 592, 820
BveI ACCTGC 1 cut(s) 528
Cac8I GCNNGC 1 cut(s) 1045
CaiI CAGNNNCTG 1 cut(s) 251
CfoI GCGC 1 cut(s) 483
Cfr13I GGNCC 1 cut(s) 344
Csp6I GTAC 3 cut(s) 54, 118, 850
CviQI GTAC 3 cut(s) 54, 118, 850
DdeI CTNAG 3 cut(s) 174, 536, 626
DpnI GATC 5 cut(s) 340, 563, 601, 648, 846
DpnII GATC 5 cut(s) 338, 561, 599, 646, 844
DraI TTTAAA 1 cut(s) 490
EaeI YGGCCR 1 cut(s) 743
Eam1104I CTCTTC 1 cut(s) 1145
EarI CTCTTC 1 cut(s) 1145
Eco31I GGTCTC 1 cut(s) 665
Eco57I CTGAAG 2 cut(s) 822, 920
Eco72I CACGTG 1 cut(s) 1185
Eco81I CCTNAGG 1 cut(s) 536
EcoNI CCTNNNNNAGG 1 cut(s) 539
EcoRI GAATTC 1 cut(s) 940
EcoRII CCWGG 1 cut(s) 602
Esp3I CGTCTC 1 cut(s) 5
FalI AAGNNNNNCTT 6 cut(s) 114, 146, 297, 329, 969, 1001
Fnu4HI GCNGC 9 cut(s) 81, 90, 93, 427, 438, 1065, 1083, 1206, 1209
FokI GGATG 3 cut(s) 368, 583, 1212
Fsp4HI GCNGC 9 cut(s) 81, 90, 93, 427, 438, 1065, 1083, 1206, 1209
GlaI GCGC 1 cut(s) 482
GluI GCNGC 9 cut(s) 81, 90, 93, 427, 438, 1065, 1083, 1206, 1209
GsaI CCCAGC 1 cut(s) 875
GsuI CTGGAG 3 cut(s) 312, 418, 625
HaeII RGCGCY 1 cut(s) 484
HaeIII GGCC 5 cut(s) 95, 345, 577, 745, 936
HhaI GCGC 1 cut(s) 483
Hin6I GCGC 1 cut(s) 481
HinP1I GCGC 1 cut(s) 481
HinfI GANTC 5 cut(s) 622, 904, 970, 998, 1088
HphI GGTGA 3 cut(s) 198, 371, 872
Hpy166II GTNNAC 5 cut(s) 187, 464, 852, 863, 883
Hpy188I TCNGA 4 cut(s) 106, 231, 627, 900
Hpy188III TCNNGA 6 cut(s) 149, 291, 389, 538, 1009, 1197
Hpy8I GTNNAC 5 cut(s) 187, 464, 852, 863, 883
HpyAV CCTTC 4 cut(s) 386, 477, 535, 1221
HpyCH4III ACNGT 4 cut(s) 117, 461, 687, 867
HpyCH4IV ACGT 3 cut(s) 160, 558, 1184
HpyCH4V TGCA 8 cut(s) 274, 429, 464, 523, 813, 889, 1064, 1211
HpyF10VI GCNNNNNNNGC 6 cut(s) 86, 89, 98, 679, 1073, 1082
HpyF3I CTNAG 3 cut(s) 174, 536, 626
HpySE526I ACGT 3 cut(s) 160, 558, 1184
HspAI GCGC 1 cut(s) 481
KpnI GGTACC 1 cut(s) 57
Kzo9I GATC 5 cut(s) 338, 561, 599, 646, 844
LmnI GCTCC 3 cut(s) 399, 409, 445
Lsp1109I GCAGC 6 cut(s) 67, 413, 424, 1069, 1076, 1195
LweI GCATC 1 cut(s) 1051
MaeII ACGT 3 cut(s) 160, 558, 1184
MaeIII GTNAC 2 cut(s) 611, 652
MalI GATC 5 cut(s) 340, 563, 601, 648, 846
MboI GATC 5 cut(s) 338, 561, 599, 646, 844
MboII GAAGA 6 cut(s) 185, 828, 913, 977, 979, 1132
MfeI CAATTG 1 cut(s) 75
MflI RGATCY 3 cut(s) 599, 646, 844
MhlI GDGCHC 3 cut(s) 466, 734, 872
MlsI TGGCCA 1 cut(s) 745
MluCI AATT 7 cut(s) 75, 198, 376, 794, 819, 940, 1212
MluNI TGGCCA 1 cut(s) 745
MlyI GAGTC 1 cut(s) 898
MmeI TCCRAC 2 cut(s) 129, 530
MnlI CCTC 6 cut(s) 12, 273, 545, 588, 984, 1016
Mox20I TGGCCA 1 cut(s) 745
MscI TGGCCA 1 cut(s) 745
MseI TTAA 2 cut(s) 489, 1119
MslI CAYNNNNRTG 1 cut(s) 1183
Msp20I TGGCCA 1 cut(s) 745
MspA1I CMGCKG 1 cut(s) 426
MspR9I CCNGG 1 cut(s) 604
MunI CAATTG 1 cut(s) 75
Mva1269I GAATGC 1 cut(s) 753
MvaI CCWGG 1 cut(s) 604
MwoI GCNNNNNNNGC 6 cut(s) 86, 89, 98, 679, 1073, 1082
NdeII GATC 5 cut(s) 338, 561, 599, 646, 844
NlaIV GGNNCC 4 cut(s) 55, 401, 528, 601
NmuCI GTSAC 1 cut(s) 611
NspI RCATGY 1 cut(s) 185
PcsI WCGNNNNNNNCGW 1 cut(s) 20
PctI GAATGC 1 cut(s) 753
PfeI GAWTC 4 cut(s) 622, 970, 998, 1088
PfoI TCCNGGA 1 cut(s) 602
PkrI GCNGC 9 cut(s) 82, 91, 94, 428, 439, 1066, 1084, 1207, 1210
PleI GAGTC 1 cut(s) 898
PmaCI CACGTG 1 cut(s) 1185
PmlI CACGTG 1 cut(s) 1185
PpsI GAGTC 1 cut(s) 898
Ppu21I YACGTR 1 cut(s) 1185
PshBI ATTAAT 1 cut(s) 1119
Psp6I CCWGG 1 cut(s) 602
PspCI CACGTG 1 cut(s) 1185
PspFI CCCAGC 1 cut(s) 871
PspGI CCWGG 1 cut(s) 602
PspN4I GGNNCC 4 cut(s) 55, 401, 528, 601
PspPI GGNCC 1 cut(s) 344
PstI CTGCAG 2 cut(s) 276, 525
PstNI CAGNNNCTG 1 cut(s) 251
PsuI RGATCY 3 cut(s) 599, 646, 844
RsaI GTAC 3 cut(s) 55, 119, 851
RsaNI GTAC 3 cut(s) 54, 118, 850
RseI CAYNNNNRTG 1 cut(s) 1183
SaqAI TTAA 2 cut(s) 489, 1119
SatI GCNGC 9 cut(s) 81, 90, 93, 427, 438, 1065, 1083, 1206, 1209
Sau3AI GATC 5 cut(s) 338, 561, 599, 646, 844
Sau96I GGNCC 1 cut(s) 344
SbfI CCTGCAGG 1 cut(s) 525
SchI GAGTC 1 cut(s) 898
ScrFI CCNGG 1 cut(s) 604
SdaI CCTGCAGG 1 cut(s) 525
SduI GDGCHC 3 cut(s) 466, 734, 872
SfaNI GCATC 1 cut(s) 1051
SfcI CTRYAG 4 cut(s) 243, 252, 272, 521
SmiMI CAYNNNNRTG 1 cut(s) 1183
SmlI CTYRAG 2 cut(s) 975, 1007
SmoI CTYRAG 2 cut(s) 975, 1007
Sse8387I CCTGCAGG 1 cut(s) 525
Sse9I AATT 7 cut(s) 75, 198, 376, 794, 819, 940, 1212
SsiI CCGC 5 cut(s) 89, 92, 407, 424, 1205
SspI AATATT 1 cut(s) 893
StyD4I CCNGG 1 cut(s) 602
TaaI ACNGT 4 cut(s) 117, 461, 687, 867
TaiI ACGT 3 cut(s) 163, 561, 1187
TaqI TCGA 1 cut(s) 749
TasI AATT 7 cut(s) 75, 198, 376, 794, 819, 940, 1212
TatI WGTACW 1 cut(s) 849
TauI GCSGC 3 cut(s) 92, 95, 1208
TfiI GAWTC 4 cut(s) 622, 970, 998, 1088
Tru1I TTAA 2 cut(s) 489, 1119
Tru9I TTAA 2 cut(s) 489, 1119
TscAI CASTG 6 cut(s) 276, 466, 572, 592, 599, 820
TseFI GTSAC 1 cut(s) 611
TseI GCWGC 6 cut(s) 80, 426, 437, 1064, 1082, 1208
Tsp45I GTSAC 1 cut(s) 611
TspDTI ATGAA 8 cut(s) 31, 192, 355, 459, 789, 801, 1080, 1205
TspGWI ACGGA 2 cut(s) 29, 407
TspRI CASTG 6 cut(s) 276, 466, 572, 592, 599, 820
VneI GTGCAC 1 cut(s) 462
VspI ATTAAT 1 cut(s) 1119
XagI CCTNNNNNAGG 1 cut(s) 539
XapI RAATTY 3 cut(s) 376, 819, 940
XceI RCATGY 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.