Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007061

Physical Location & Seq

Genomic Coordinates Reverse (-)

865895 .. 867733

Gene Structure 1839 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G03470.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 810 bp

ATGGTGATGGACTCATCAAAATGGTGGTGGATTGGAAATCACAACACTACTAATTTCTCTCCTTGGCTTCATTCTACTCTCTCTGAATTGGATGAAAAGACAAAGGAAATGCTGAGAGTGATTGATGAGGATGCTGATTCTTTTGCGGCACGAGCTGAGATGTATTACAAGAAAAGGCCCGAGCTTATAGCTATGGTGGAAGAATTCTACCGTTCACATCGCTCCTTGGCCGAGAGGTACGACTTGTTGAGACCCTCTTCTGTGCATAAACATGGCTCAGACTCGGAGAGTCATGAGAAATCATCAACTTGTGATGAGTCTTCTTGGTCTGAGGCTTGTGAGACTCATGAGGAGTATGCGGAGTCTGAAATAGATAACGGTGAAAGCAAATGGGTCGATGAAAGTGAAATTGATGGCATTGTTGAGGAAATAGAACCATCGGAAGTCGTTTACAGTGAAGGTAATGGAAATTCTGAGATGATGAAGATAGAGATAGAGAGGCTGAGAGAGGAGAATAAGGTTTACAGTGAAATGGTGAGAGAGAAAGATGAAGAGAAGAGAGAAGCTATAAGGCAAATGAGTGTAGCAATACAAATGCTTAAAGAAGAGAACTCAGAGCTTAAGAAACGTGTTACCAATACTGTTGTTGCAAGGCGTAATAAGGAAGGTGGTGATTCTCAGAGGAAGCAACAGATGTGGAAGCCATTTGAGTTTAAGAAGATTAAGCTTGAAGGGTTATGGGGGAAAGGCTTTGGCAATTGGGCTCTCCCAAACACAGATTCTACTTCCAAAGAGCTCATGACTCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005773 GO:0005774 GO:0012505 GO:0016020 GO:0031090 GO:0031965 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KIP1

Protein Analysis

269

Amino Acids

31.48

Weight (kDa)

4.96

Isoelectric Point (pI)

63.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KIP1	PF07765	8 - 81	5.2e-36	KIP1-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007061)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03470 AT1G03470 AT1G03470 AT1G03470 AT4G03153
fragaria_vesca	FvH4_2g24780 FvH4_2g24780 FvH4_2g24780 FvH4_2g24780
malus_domestica	MD11G1298400.v1.1 MD11G1298500.v1.1
prunus_persica	Prupe.8G252800_v2.0.a1 Prupe.8G252800_v2.0.a1 Prupe.8G252800_v2.0.a1 Prupe.8G252800_v2.0.a1
pyrus_communis	pycom03g22020 pycom11g26200
rosa_chinensis	RchiOBHm_Chr6g0292611
rosa_laevigata	RLG00000012007
rosa_multiflora	Rmu_sc0000515.1_g000006
rosa_roxburghii	Rroxscaffold_7G00174870
rosa_rugosa	Rorug06G0228300
rosa_samantha	Rh6AG341500 Rh6CG355800
rosa_wichuraiana	Rw6G029760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	146, 359
AcoI	YGGCCR	1 cut(s)	228
AcsI	RAATTY	2 cut(s)	203, 469
AfaI	GTAC	1 cut(s)	239
AflII	CTTAAG	1 cut(s)	620
AflIII	ACRYGT	1 cut(s)	628
AgsI	TTSAA	1 cut(s)	731
AjuI	GAANNNNNNNTTGG	2 cut(s)	763, 795
AluBI	AGCT	7 cut(s)	155, 184, 191, 566, 619, 727, 796
AluI	AGCT	7 cut(s)	155, 184, 191, 566, 619, 727, 796
Alw21I	GWGCWC	1 cut(s)	798
Alw26I	GTCTC	2 cut(s)	244, 335
Ama87I	CYCGRG	1 cut(s)	179
AoxI	GGCC	2 cut(s)	176, 228
ApoI	RAATTY	2 cut(s)	203, 469
AspS9I	GGNCC	1 cut(s)	177
AsuHPI	GGTGA	4 cut(s)	16, 392, 547, 683
AvaI	CYCGRG	1 cut(s)	179
BanII	GRGCYC	2 cut(s)	766, 798
BauI	CACGAG	1 cut(s)	150
BbsI	GAAGAC	1 cut(s)	312
Bbv12I	GWGCWC	1 cut(s)	798
BccI	CCATC	2 cut(s)	407, 445
BcgI	CGANNNNNNTGC	2 cut(s)	376, 410
BcoDI	GTCTC	2 cut(s)	244, 335
BfrI	CTTAAG	1 cut(s)	620
BisI	GCNGC	1 cut(s)	147
BlsI	GCNGC	1 cut(s)	148
BmeT110I	CYCGRG	1 cut(s)	179
BmgT120I	GGNCC	1 cut(s)	177
BmsI	GCATC	1 cut(s)	121
BpiI	GAAGAC	1 cut(s)	312
BsaI	GGTCTC	1 cut(s)	244
BsaJI	CCNNGG	2 cut(s)	62, 225
BseDI	CCNNGG	2 cut(s)	62, 225
BseGI	GGATG	2 cut(s)	97, 136
BseMII	CTCAG	8 cut(s)	104, 147, 291, 321, 465, 494, 627, 692
BseRI	GAGGAG	2 cut(s)	365, 524
BshFI	GGCC	2 cut(s)	178, 230
BsiHKAI	GWGCWC	1 cut(s)	798
BsiHKCI	CYCGRG	1 cut(s)	179
BsmAI	GTCTC	2 cut(s)	244, 335
BsnI	GGCC	2 cut(s)	178, 230
Bso31I	GGTCTC	1 cut(s)	244
BsoBI	CYCGRG	1 cut(s)	179
Bsp1286I	GDGCHC	2 cut(s)	766, 798
BspACI	CCGC	2 cut(s)	146, 359
BspANI	GGCC	2 cut(s)	178, 230
BspCNI	CTCAG	8 cut(s)	105, 148, 290, 322, 466, 495, 626, 691
BspHI	TCATGA	3 cut(s)	292, 346, 798
BspTI	CTTAAG	1 cut(s)	620
BspTNI	GGTCTC	1 cut(s)	244
BssECI	CCNNGG	2 cut(s)	62, 225
BssSI	CACGAG	1 cut(s)	150
BssT1I	CCWWGG	2 cut(s)	62, 225
Bst2BI	CACGAG	1 cut(s)	150
Bst4CI	ACNGT	5 cut(s)	212, 380, 455, 527, 643
Bst6I	CTCTTC	4 cut(s)	262, 546, 551, 600
BstAFI	CTTAAG	1 cut(s)	620
BstDEI	CTNAG	8 cut(s)	113, 156, 277, 330, 474, 503, 613, 678
BstF5I	GGATG	2 cut(s)	97, 136
BstMAI	GTCTC	2 cut(s)	244, 335
BstMWI	GCNNNNNNNGC	1 cut(s)	152
BstV2I	GAAGAC	1 cut(s)	312
BsuRI	GGCC	2 cut(s)	178, 230
BtgZI	GCGATG	1 cut(s)	203
BtsCI	GGATG	2 cut(s)	97, 136
BtsIMutI	CAGTG	2 cut(s)	460, 532
CciI	TCATGA	3 cut(s)	292, 346, 798
Cfr13I	GGNCC	1 cut(s)	177
Csp6I	GTAC	1 cut(s)	238
CspCI	CAANNNNNGTGG	2 cut(s)	677, 712
CviAII	CATG	4 cut(s)	272, 293, 347, 799
CviQI	GTAC	1 cut(s)	238
DdeI	CTNAG	8 cut(s)	113, 156, 277, 330, 474, 503, 613, 678
EaeI	YGGCCR	1 cut(s)	228
Eam1104I	CTCTTC	4 cut(s)	262, 546, 551, 600
EarI	CTCTTC	4 cut(s)	262, 546, 551, 600
Ecl136II	GAGCTC	1 cut(s)	796
Eco130I	CCWWGG	2 cut(s)	62, 225
Eco24I	GRGCYC	2 cut(s)	766, 798
Eco31I	GGTCTC	1 cut(s)	244
Eco53kI	GAGCTC	1 cut(s)	796
Eco88I	CYCGRG	1 cut(s)	179
EcoICRI	GAGCTC	1 cut(s)	796
EcoRI	GAATTC	1 cut(s)	203
EcoT14I	CCWWGG	2 cut(s)	62, 225
EcoT38I	GRGCYC	2 cut(s)	766, 798
ErhI	CCWWGG	2 cut(s)	62, 225
FaeI	CATG	4 cut(s)	275, 296, 350, 802
FatI	CATG	4 cut(s)	271, 292, 346, 798
Fnu4HI	GCNGC	1 cut(s)	147
FokI	GGATG	2 cut(s)	104, 143
FriOI	GRGCYC	2 cut(s)	766, 798
Fsp4HI	GCNGC	1 cut(s)	147
GluI	GCNGC	1 cut(s)	147
HaeIII	GGCC	2 cut(s)	178, 230
Hin1II	CATG	4 cut(s)	275, 296, 350, 802
HindIII	AAGCTT	1 cut(s)	725
HphI	GGTGA	4 cut(s)	16, 392, 547, 683
Hpy166II	GTNNAC	3 cut(s)	215, 451, 523
Hpy188I	TCNGA	9 cut(s)	85, 280, 286, 331, 367, 442, 475, 616, 681
Hpy188III	TCNNGA	3 cut(s)	293, 347, 799
Hpy8I	GTNNAC	3 cut(s)	215, 451, 523
HpyAV	CCTTC	3 cut(s)	452, 659, 725
HpyCH4III	ACNGT	5 cut(s)	212, 380, 455, 527, 643
HpyCH4IV	ACGT	1 cut(s)	628
HpyCH4V	TGCA	2 cut(s)	265, 650
HpyF10VI	GCNNNNNNNGC	1 cut(s)	152
HpyF3I	CTNAG	8 cut(s)	113, 156, 277, 330, 474, 503, 613, 678
HpySE526I	ACGT	1 cut(s)	628
Hsp92II	CATG	4 cut(s)	275, 296, 350, 802
LmnI	GCTCC	1 cut(s)	227
LweI	GCATC	1 cut(s)	121
MaeII	ACGT	1 cut(s)	628
MaeIII	GTNAC	1 cut(s)	631
MboII	GAAGA	8 cut(s)	212, 249, 312, 496, 563, 568, 617, 730
MfeI	CAATTG	1 cut(s)	757
MhlI	GDGCHC	2 cut(s)	766, 798
MluCI	AATT	6 cut(s)	52, 86, 203, 408, 469, 757
MlyI	GAGTC	7 cut(s)	5, 275, 298, 326, 337, 371, 796
MnlI	CCTC	9 cut(s)	121, 228, 265, 325, 343, 418, 492, 502, 675
MseI	TTAA	4 cut(s)	600, 621, 714, 723
MslI	CAYNNNNRTG	2 cut(s)	19, 270
MspCI	CTTAAG	1 cut(s)	620
MunI	CAATTG	1 cut(s)	757
MwoI	GCNNNNNNNGC	1 cut(s)	152
NlaIII	CATG	4 cut(s)	275, 296, 350, 802
NmeAIII	GCCGAG	1 cut(s)	256
PagI	TCATGA	3 cut(s)	292, 346, 798
PfeI	GAWTC	3 cut(s)	137, 674, 779
PkrI	GCNGC	1 cut(s)	148
PleI	GAGTC	7 cut(s)	5, 275, 297, 325, 337, 370, 796
PpsI	GAGTC	7 cut(s)	5, 275, 297, 325, 337, 370, 796
Psp124BI	GAGCTC	1 cut(s)	798
PspPI	GGNCC	1 cut(s)	177
RsaI	GTAC	1 cut(s)	239
RsaNI	GTAC	1 cut(s)	238
RseI	CAYNNNNRTG	2 cut(s)	19, 270
SacI	GAGCTC	1 cut(s)	798
SaqAI	TTAA	4 cut(s)	600, 621, 714, 723
SatI	GCNGC	1 cut(s)	147
Sau96I	GGNCC	1 cut(s)	177
SchI	GAGTC	7 cut(s)	5, 275, 298, 326, 337, 371, 796
SduI	GDGCHC	2 cut(s)	766, 798
SfaNI	GCATC	1 cut(s)	121
SmiMI	CAYNNNNRTG	2 cut(s)	19, 270
SmlI	CTYRAG	1 cut(s)	620
SmoI	CTYRAG	1 cut(s)	620
Sse9I	AATT	6 cut(s)	52, 86, 203, 408, 469, 757
SsiI	CCGC	2 cut(s)	146, 359
SstI	GAGCTC	1 cut(s)	798
StyI	CCWWGG	2 cut(s)	62, 225
TaaI	ACNGT	5 cut(s)	212, 380, 455, 527, 643
TaiI	ACGT	1 cut(s)	631
TaqI	TCGA	1 cut(s)	396
TasI	AATT	6 cut(s)	52, 86, 203, 408, 469, 757
TauI	GCSGC	1 cut(s)	149
TfiI	GAWTC	3 cut(s)	137, 674, 779
Tru1I	TTAA	4 cut(s)	600, 621, 714, 723
Tru9I	TTAA	4 cut(s)	600, 621, 714, 723
TscAI	CASTG	2 cut(s)	460, 532
TspDTI	ATGAA	5 cut(s)	59, 108, 414, 497, 564
TspRI	CASTG	2 cut(s)	460, 532
Vha464I	CTTAAG	1 cut(s)	620
XapI	RAATTY	2 cut(s)	203, 469

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.