Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0007061

Physical Location & Seq

Genomic Coordinates Reverse (-)

21665389 .. 21668208

Gene Structure 2820 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G252800.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 768 bp

ATGACGAGGCAGCAGACTACACACTGGTGGTTGTATGACAGTCACAGCAACTCCAGACGCTCTCCATGGCTTCAAACCACCCTCGCTGACCTAGAGCATAAGACAGAGGACATACTAAAGCTGATTCAGGAAGATGCAGATTCCTTTGCTCAACGTGCAGAGATGTATTACAAGAAGCGGCCGCAGCTAATCAGCATGGTTGAAGAATTTTATCGAGCTCACCGGTCATTGGCTGAGCGATATGATCAACTTAAGTCAGATCCAGGAACTCGTCTCCTGACAACATTAGGGTCTCCATTCTCTTCCTCCAAATGCCAGTCTGAGAAGTCAATGAGCGTGGTGGATCTGAACTTTGATAGCCACTCCGAAACTTTTGAACCTGAGGAGTACTCCGAGTCTGAAGTTGATGATCCGGAACCGGATGATGAAACCCAAGTTGATGAAGAAATGAAAGAGAAGGCTTCGGGTGGGGTTAGTGATGATGAGGTGAGGAAGTTAAGGGAAGTAATAGAGAAGCTTGAGGAAGAGAACAGAATCCAAAAGGATCAAATAAAGCAGAAAGATGAAGAGAAGAGAGAGGTAATAAGACAGTTAAGTTTAGCTGTGGATATGCTCAAAGAGGAGAATGTGGAGCTAAGAAAGAAGTGCCTTGCCAGAGAATCACCTAAAAATTCGAGCCCCTCTGAGTGCAACAAATTCACAGGGACATTTTTAAGGAAGTTGTTTAACAGGTCTCCAAAGTTTCATCCTACAATTGTTGCACTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005773 GO:0005774 GO:0012505 GO:0016020 GO:0031090 GO:0031965 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KIP1

Protein Analysis

256

Amino Acids

29.87

Weight (kDa)

5.16

Isoelectric Point (pI)

70.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007061)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03470 AT1G03470 AT1G03470 AT1G03470 AT4G03153
fragaria_vesca	FvH4_2g24780 FvH4_2g24780 FvH4_2g24780 FvH4_2g24780
malus_domestica	MD11G1298400.v1.1 MD11G1298500.v1.1
prunus_persica	Prupe.8G252800_v2.0.a1 Prupe.8G252800_v2.0.a1 Prupe.8G252800_v2.0.a1 Prupe.8G252800_v2.0.a1
pyrus_communis	pycom03g22020 pycom11g26200
rosa_chinensis	RchiOBHm_Chr6g0292611
rosa_laevigata	RLG00000012007
rosa_multiflora	Rmu_sc0000515.1_g000006
rosa_roxburghii	Rroxscaffold_7G00174870
rosa_rugosa	Rorug06G0228300
rosa_samantha	Rh6AG341500 Rh6CG355800
rosa_wichuraiana	Rw6G029760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccIII	TCCGGA	1 cut(s)	412
AciI	CCGC	2 cut(s)	178, 182
AclWI	GGATC	4 cut(s)	254, 351, 404, 552
AcoI	YGGCCR	1 cut(s)	179
AcsI	RAATTY	3 cut(s)	206, 670, 695
AcuI	CTGAAG	1 cut(s)	420
AfaI	GTAC	1 cut(s)	389
AfiI	CCNNNNNNNGG	1 cut(s)	229
AflII	CTTAAG	1 cut(s)	251
AgeI	ACCGGT	1 cut(s)	222
AgsI	TTSAA	3 cut(s)	74, 203, 377
AjnI	CCWGG	1 cut(s)	262
AleI	CACNNNNGTG	1 cut(s)	25
AluBI	AGCT	6 cut(s)	121, 187, 218, 517, 602, 634
AluI	AGCT	6 cut(s)	121, 187, 218, 517, 602, 634
Alw21I	GWGCWC	1 cut(s)	220
Alw26I	GTCTC	3 cut(s)	278, 297, 738
AlwI	GGATC	4 cut(s)	254, 351, 404, 552
Aor13HI	TCCGGA	1 cut(s)	412
AoxI	GGCC	1 cut(s)	179
ApeKI	GCWGC	2 cut(s)	10, 184
ApoI	RAATTY	3 cut(s)	206, 670, 695
AsiGI	ACCGGT	1 cut(s)	222
AsuHPI	GGTGA	3 cut(s)	212, 499, 654
AxyI	CCTNAGG	1 cut(s)	381
BanII	GRGCYC	2 cut(s)	220, 680
Bbv12I	GWGCWC	1 cut(s)	220
BbvI	GCAGC	2 cut(s)	22, 196
BciT130I	CCWGG	1 cut(s)	264
BclI	TGATCA	1 cut(s)	244
BcoDI	GTCTC	3 cut(s)	278, 297, 738
BfaI	CTAG	2 cut(s)	92, 766
BfrI	CTTAAG	1 cut(s)	251
BisI	GCNGC	4 cut(s)	11, 179, 182, 185
BlpI	GCTNAGC	1 cut(s)	234
BlsI	GCNGC	4 cut(s)	12, 180, 183, 186
BmcAI	AGTACT	1 cut(s)	389
Bme1390I	CCNGG	1 cut(s)	264
BmiI	GGNNCC	1 cut(s)	417
BmrFI	CCNGG	1 cut(s)	264
BmsI	GCATC	1 cut(s)	124
BplI	GAGNNNNNCTC	2 cut(s)	374, 406
BpmI	CTGGAG	1 cut(s)	37
Bpu1102I	GCTNAGC	1 cut(s)	234
BpuEI	CTTGAG	1 cut(s)	539
BsaI	GGTCTC	2 cut(s)	297, 738
BsaJI	CCNNGG	1 cut(s)	65
BsaWI	WCCGGW	3 cut(s)	222, 412, 418
BsaXI	ACNNNNNCTCC	2 cut(s)	35, 65
Bsc4I	CCNNNNNNNGG	1 cut(s)	229
Bse118I	RCCGGY	1 cut(s)	222
Bse1I	ACTGG	2 cut(s)	29, 316
Bse21I	CCTNAGG	1 cut(s)	381
BseAI	TCCGGA	1 cut(s)	412
BseBI	CCWGG	1 cut(s)	264
BseDI	CCNNGG	1 cut(s)	65
BseGI	GGATG	2 cut(s)	427, 745
BseLI	CCNNNNNNNGG	1 cut(s)	229
BseMII	CTCAG	4 cut(s)	225, 312, 372, 675
BseNI	ACTGG	2 cut(s)	29, 316
BseRI	GAGGAG	2 cut(s)	398, 635
BseX3I	CGGCCG	1 cut(s)	179
BseXI	GCAGC	2 cut(s)	22, 196
BsgI	GTGCAG	1 cut(s)	177
Bsh1285I	CGRYCG	1 cut(s)	182
BshFI	GGCC	1 cut(s)	181
BshTI	ACCGGT	1 cut(s)	222
BsiEI	CGRYCG	1 cut(s)	182
BsiHKAI	GWGCWC	1 cut(s)	220
BsiSI	CCGG	3 cut(s)	223, 413, 419
BslFI	GGGAC	1 cut(s)	718
BslI	CCNNNNNNNGG	1 cut(s)	229
BsmAI	GTCTC	3 cut(s)	278, 297, 738
BsmBI	CGTCTC	1 cut(s)	278
BsmFI	GGGAC	1 cut(s)	718
BsnI	GGCC	1 cut(s)	181
Bso31I	GGTCTC	2 cut(s)	297, 738
Bsp1286I	GDGCHC	2 cut(s)	220, 680
Bsp13I	TCCGGA	1 cut(s)	412
Bsp143I	GATC	5 cut(s)	244, 259, 343, 409, 544
Bsp1720I	GCTNAGC	1 cut(s)	234
Bsp19I	CCATGG	1 cut(s)	65
BspACI	CCGC	2 cut(s)	178, 182
BspANI	GGCC	1 cut(s)	181
BspCNI	CTCAG	4 cut(s)	226, 313, 373, 676
BspEI	TCCGGA	1 cut(s)	412
BspLI	GGNNCC	1 cut(s)	417
BspPI	GGATC	4 cut(s)	254, 351, 404, 552
BspTI	CTTAAG	1 cut(s)	251
BspTNI	GGTCTC	2 cut(s)	297, 738
BsrFI	RCCGGY	1 cut(s)	222
BsrI	ACTGG	2 cut(s)	29, 316
BssAI	RCCGGY	1 cut(s)	222
BssECI	CCNNGG	1 cut(s)	65
BssMI	GATC	5 cut(s)	244, 259, 343, 409, 544
BssT1I	CCWWGG	1 cut(s)	65
Bst2UI	CCWGG	1 cut(s)	264
Bst4CI	ACNGT	2 cut(s)	41, 591
Bst6I	CTCTTC	4 cut(s)	307, 519, 561, 566
BstAFI	CTTAAG	1 cut(s)	251
BstDEI	CTNAG	5 cut(s)	234, 321, 381, 635, 684
BstDSI	CCRYGG	1 cut(s)	65
BstF5I	GGATG	2 cut(s)	427, 745
BstKTI	GATC	5 cut(s)	247, 262, 346, 412, 547
BstMAI	GTCTC	3 cut(s)	278, 297, 738
BstMBI	GATC	5 cut(s)	244, 259, 343, 409, 544
BstMCI	CGRYCG	1 cut(s)	182
BstMWI	GCNNNNNNNGC	2 cut(s)	155, 184
BstNI	CCWGG	1 cut(s)	264
BstSCI	CCNGG	1 cut(s)	262
BstV1I	GCAGC	2 cut(s)	22, 196
BstX2I	RGATCY	2 cut(s)	259, 343
BstYI	RGATCY	2 cut(s)	259, 343
BstZI	CGGCCG	1 cut(s)	179
Bsu36I	CCTNAGG	1 cut(s)	381
BsuRI	GGCC	1 cut(s)	181
BtgI	CCRYGG	1 cut(s)	65
BtsCI	GGATG	2 cut(s)	427, 745
BtsIMutI	CAGTG	1 cut(s)	22
CciNI	GCGGCCGC	1 cut(s)	179
Cfr10I	RCCGGY	1 cut(s)	222
CseI	GACGC	1 cut(s)	66
Csp6I	GTAC	1 cut(s)	388
CspAI	ACCGGT	1 cut(s)	222
CspCI	CAANNNNNGTGG	2 cut(s)	318, 353
CviAII	CATG	2 cut(s)	66, 196
CviQI	GTAC	1 cut(s)	388
DdeI	CTNAG	5 cut(s)	234, 321, 381, 635, 684
DpnI	GATC	5 cut(s)	246, 261, 345, 411, 546
DpnII	GATC	5 cut(s)	244, 259, 343, 409, 544
EaeI	YGGCCR	1 cut(s)	179
EagI	CGGCCG	1 cut(s)	179
Eam1104I	CTCTTC	4 cut(s)	307, 519, 561, 566
EarI	CTCTTC	4 cut(s)	307, 519, 561, 566
Ecl136II	GAGCTC	1 cut(s)	218
EclXI	CGGCCG	1 cut(s)	179
Eco130I	CCWWGG	1 cut(s)	65
Eco24I	GRGCYC	2 cut(s)	220, 680
Eco31I	GGTCTC	2 cut(s)	297, 738
Eco52I	CGGCCG	1 cut(s)	179
Eco53kI	GAGCTC	1 cut(s)	218
Eco57I	CTGAAG	1 cut(s)	420
Eco81I	CCTNAGG	1 cut(s)	381
EcoICRI	GAGCTC	1 cut(s)	218
EcoRII	CCWGG	1 cut(s)	262
EcoT14I	CCWWGG	1 cut(s)	65
EcoT38I	GRGCYC	2 cut(s)	220, 680
ErhI	CCWWGG	1 cut(s)	65
Esp3I	CGTCTC	1 cut(s)	278
FaeI	CATG	2 cut(s)	69, 199
FaiI	YATR	7 cut(s)	36, 67, 99, 113, 197, 243, 611
FaqI	GGGAC	1 cut(s)	718
FatI	CATG	2 cut(s)	65, 195
FbaI	TGATCA	1 cut(s)	244
Fnu4HI	GCNGC	4 cut(s)	11, 179, 182, 185
FokI	GGATG	2 cut(s)	434, 732
FriOI	GRGCYC	2 cut(s)	220, 680
Fsp4HI	GCNGC	4 cut(s)	11, 179, 182, 185
FspBI	CTAG	2 cut(s)	92, 766
GluI	GCNGC	4 cut(s)	11, 179, 182, 185
GsuI	CTGGAG	1 cut(s)	37
HaeIII	GGCC	1 cut(s)	181
HapII	CCGG	3 cut(s)	223, 413, 419
HgaI	GACGC	1 cut(s)	66
Hin1II	CATG	2 cut(s)	69, 199
HindIII	AAGCTT	1 cut(s)	515
HinfI	GANTC	5 cut(s)	124, 140, 395, 534, 659
HpaII	CCGG	3 cut(s)	223, 413, 419
HphI	GGTGA	3 cut(s)	212, 499, 654
Hpy188I	TCNGA	7 cut(s)	259, 322, 348, 367, 394, 400, 685
Hpy188III	TCNNGA	4 cut(s)	54, 128, 277, 413
HpyAV	CCTTC	1 cut(s)	451
HpyCH4III	ACNGT	2 cut(s)	41, 591
HpyCH4IV	ACGT	1 cut(s)	154
HpyCH4V	TGCA	4 cut(s)	137, 158, 690, 761
HpyF10VI	GCNNNNNNNGC	2 cut(s)	155, 184
HpyF3I	CTNAG	5 cut(s)	234, 321, 381, 635, 684
HpySE526I	ACGT	1 cut(s)	154
Hsp92II	CATG	2 cut(s)	69, 199
Kpn2I	TCCGGA	1 cut(s)	412
Ksp22I	TGATCA	1 cut(s)	244
Kzo9I	GATC	5 cut(s)	244, 259, 343, 409, 544
LmnI	GCTCC	1 cut(s)	631
Lsp1109I	GCAGC	2 cut(s)	22, 196
LweI	GCATC	1 cut(s)	124
MaeI	CTAG	2 cut(s)	92, 766
MaeII	ACGT	1 cut(s)	154
MaeIII	GTNAC	1 cut(s)	41
MalI	GATC	5 cut(s)	246, 261, 345, 411, 546
MboI	GATC	5 cut(s)	244, 259, 343, 409, 544
MboII	GAAGA	7 cut(s)	143, 215, 294, 455, 536, 578, 583
MfeI	CAATTG	1 cut(s)	753
MflI	RGATCY	2 cut(s)	259, 343
MhlI	GDGCHC	2 cut(s)	220, 680
MluCI	AATT	4 cut(s)	206, 670, 695, 753
MlyI	GAGTC	1 cut(s)	404
MroI	TCCGGA	1 cut(s)	412
MseI	TTAA	5 cut(s)	252, 497, 593, 713, 726
MslI	CAYNNNNRTG	1 cut(s)	25
MspCI	CTTAAG	1 cut(s)	251
MspI	CCGG	3 cut(s)	223, 413, 419
MspR9I	CCNGG	1 cut(s)	264
MunI	CAATTG	1 cut(s)	753
MvaI	CCWGG	1 cut(s)	264
MwoI	GCNNNNNNNGC	2 cut(s)	155, 184
NcoI	CCATGG	1 cut(s)	65
NdeII	GATC	5 cut(s)	244, 259, 343, 409, 544
NlaIII	CATG	2 cut(s)	69, 199
NlaIV	GGNNCC	1 cut(s)	417
NmuCI	GTSAC	1 cut(s)	41
NotI	GCGGCCGC	1 cut(s)	179
OliI	CACNNNNGTG	1 cut(s)	25
PfeI	GAWTC	4 cut(s)	124, 140, 534, 659
PfoI	TCCNGGA	1 cut(s)	262
PinAI	ACCGGT	1 cut(s)	222
PkrI	GCNGC	4 cut(s)	12, 180, 183, 186
PleI	GAGTC	1 cut(s)	403
PpsI	GAGTC	1 cut(s)	403
Psp124BI	GAGCTC	1 cut(s)	220
Psp6I	CCWGG	1 cut(s)	262
PspGI	CCWGG	1 cut(s)	262
PspN4I	GGNNCC	1 cut(s)	417
PsuI	RGATCY	2 cut(s)	259, 343
RsaI	GTAC	1 cut(s)	389
RsaNI	GTAC	1 cut(s)	388
RseI	CAYNNNNRTG	1 cut(s)	25
SacI	GAGCTC	1 cut(s)	220
SaqAI	TTAA	5 cut(s)	252, 497, 593, 713, 726
SatI	GCNGC	4 cut(s)	11, 179, 182, 185
Sau3AI	GATC	5 cut(s)	244, 259, 343, 409, 544
ScaI	AGTACT	1 cut(s)	389
SchI	GAGTC	1 cut(s)	404
ScrFI	CCNGG	1 cut(s)	264
SduI	GDGCHC	2 cut(s)	220, 680
SfaNI	GCATC	1 cut(s)	124
SmiMI	CAYNNNNRTG	1 cut(s)	25
SmlI	CTYRAG	2 cut(s)	251, 518
SmoI	CTYRAG	2 cut(s)	251, 518
Sse9I	AATT	4 cut(s)	206, 670, 695, 753
SsiI	CCGC	2 cut(s)	178, 182
SspMI	CTAG	2 cut(s)	92, 766
SstI	GAGCTC	1 cut(s)	220
StyD4I	CCNGG	1 cut(s)	262
StyI	CCWWGG	1 cut(s)	65
TaaI	ACNGT	2 cut(s)	41, 591
TaiI	ACGT	1 cut(s)	157
TaqI	TCGA	2 cut(s)	214, 674
TasI	AATT	4 cut(s)	206, 670, 695, 753
TatI	WGTACW	1 cut(s)	387
TauI	GCSGC	2 cut(s)	181, 184
TfiI	GAWTC	4 cut(s)	124, 140, 534, 659
Tru1I	TTAA	5 cut(s)	252, 497, 593, 713, 726
Tru9I	TTAA	5 cut(s)	252, 497, 593, 713, 726
TscAI	CASTG	1 cut(s)	29
TseFI	GTSAC	1 cut(s)	41
TseI	GCWGC	2 cut(s)	10, 184
Tsp45I	GTSAC	1 cut(s)	41
TspDTI	ATGAA	5 cut(s)	441, 456, 464, 579, 734
TspRI	CASTG	1 cut(s)	29
Vha464I	CTTAAG	1 cut(s)	251
XapI	RAATTY	3 cut(s)	206, 670, 695
XspI	CTAG	2 cut(s)	92, 766
ZrmI	AGTACT	1 cut(s)	389

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.