Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0007932

Physical Location & Seq

Genomic Coordinates Reverse (-)

1064264 .. 1071080

Gene Structure 6817 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G04120.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4545 bp

ATGGATTTTATTGAGATCTCGTTGATCTTTCGAGAGCATTTGCCACTACTGGAACTATGTTCGGTCATCATCAACCTCCTACTCTTTCTTGTCTTTCTATTTGCTGTCTCCGCGAGGCAGATTCTCGTCTGCGTGAGAAGAGGCAGAGATAGGCTCTCTAAGGACGATACGGTTTCAGCTTCTAATCTTAGCTTGGAAAGAGAGGTTAACCATGTTAGTGTTGGGTTTGGGTTTAATCTGTCTTTGCTCTGTTGCTTATATGTGTTAGGCGTCCAAGTTTTGGTGTTAGTATATGATGGGGTTAAGGTTAGAAGAGAAGTCAGTGACTGGTTTGTTCTTTGCTTTCCAGCTTCTCAGAGTTTAGCTTGGTTTGTCCTTAGCTTCTTAGTTCTTCATTTGAAATACAAGTCTTCAGAGAAGCTACCCTTCTTGGTGAGGATATGGTGGTTCCTGGCGTTTTCGATTTGCCTCTGTACTATGTATGTCGATGGAAGAAGGCTAGCCATTGAAGGTTGGAGCAGATGTTCTTCTCATGTTGTCGCCAATTTAGCTGTTACACCTGCTCTTGGGTTTCTCTGCTTTCTGGCCTGGAGAGGCGTTTCTGGTATTCAAGTTACCAGAAGCTCCTCTGATCTTCAAGAGCCTTTGCTTGTTGAAGAAGAGGCAGCTTGTCTTAAAGTTACTCCATATAGTACTGCTGGGCTAGTTAGCCTTATTACGCTTTCATGGTTGGATCCACTTCTCTCGGCTGGTTCAAAAAGACCGCTTGAGCTTAAGGATATACCGCTTCTTGCACCAAGAGATAGAGCCAAATCAAGTTACAAGGTCTTGAAGTCGAATTGGAAGAGATGCAAGTCCGAGAATCCTTCAAAGCCTCCTTCTTTAGCTCGTGCAATTATGAAATCATTTTGGAAAGAAGCTGCTTGCAATGCCGTATTTGCTGGGTTGAATACTCTTGTGTCCTATGTCGGTCCTTACTTGATCAGCTACTTTGTTGATTATCTTGGAGGGAAGGAGATTTTCCCTCATGAAGGATACGTACTCGCTGGGATATTCTTTACGTCCAAGCTTATAGAGACAGTCACCACCCGCCAGTGGTATATGGGTGTTGATATCCTAGGGATGCATGTTAGATCAGCTCTTACAGCAATGGTATACCGAAAAGGTCTCAAACTTTCAAGTATAGCCAAGCAGAACCACACGAGCGGTGAAATTGTAAACTACATGGCAGTCGATGTCCAGCGCATAGGAGATTACTCATGGTATCTTCATGATATTTGGATGCTTCCGATGCAAATAGTTCTTGCTCTTGCAATCCTATATAAAAGCGTGGGCATAGCTGCTGTAGCTACATTGGTTGCTACAATAATCTCGATTCTTGTCACGATTCCACTCGCTAAGGTCCAGGAAGACTATCAAGATAAGTTGATGACTGCGAAAGATGAAAGAATGAGGAAAACCTCAGAGTGTCTTAGGAACATGAGAGTTCTGAAATTGCAGGCATGGGAAGATCGTTATAGAGTGAGATTGGAAGAAATGAGGGAAGAGGAGTATGGTTGGCTTCGCAAAGCCTTATATTCTCAGGCTTTTGTTACTTTTATCTTTTGGAGTTCCCCCATTTTTGTCGCCGCAGTTACATTCGCTACTTCGATATTTCTAGGCACTCAACTTACCGCTGGAGGTGTTCTTTCTGCTCTGGCGACATTCAGAATTCTTCAGGAGCCACTTCGGAACTTTCCTGATCTGGTTTCAATGATGGCTCAGACAAAGGTTTCTCTTGATAGGATTTCTGGGTTCTTGCAGGAGGAAGAACTTCAAGAAGATGCAACTGTTGTTATTCCACGGGGACTTTCGAATATAGCCATAGAGATTAAAGATGGTGTGTTTTGTTGGGACCCTTTTTCTTCAAGGCCGACATTATCTGGGATTCAGATGAAAGTGGAGAAGGGTATGCGTGTGGCTGTCTGTGGCACAGTTGGCTCTGGAAAATCAAGTTTTATCTCTTGCATCCTAGGGGAAATCCCAAAAATCTCTGGCGAAGTTAGAATATGTGGTACTACTGGTTATGTGTCTCAATCGGCTTGGATTCAGTCTGGTAACATTGAAGAAAACATTCTATTTGGCAGTCCAATGGAGAAAACAAAGTACAAGAATGTGATACAAGCATGTTCCCTAAAGAAAGATATAGAGCTTTTCTCACATGGGGACCAAACTATTATCGGGGAGAGAGGTATAAATCTCAGCGGAGGTCAGAAACAGCGTGTACAACTTGCAAGGGCATTATATCAAGATGCTGACATTTATTTACTAGACGACCCTTTTAGTGCTCTTGATGCACACACTGGCTCTGATTTGTTTAGGGATTATATTCTATCTGCATTGGCTGAGAAAACTGTGGTTTTTGTAACGCATCAAGTTGAGTTTCTCCCTGCAGCTGATCTAATATTGGTTCTGAAGGAAGGCAGGATTATTCAATCGGGTAAATATGATGATCTGCTGCAAGCAGGTACTGATTTTAAGGCCTTAGTGTCTGCCCACCATGAAGCAATCGAGGCAATGGACATCCCAAGTCCCTCCTCAGAAGACTCTGATGAAAATCCTATTCGCGATAGTTTGGTCTTGCATAATCCAAAGTCTGATGTTTTTGAAAATGACATCGAGACTTTGGCAAAGGAAGTACAAGAGGGAGGATCTGCTTCAGATCTAAAGGCAATCAAAGAGAAGAAGAAGAAAGCTAAGCGTTCCCGCAAAAAGCAGCTTGTTCAAGAAGAGGAACGAGTAAAGGGAAAAGTCAGCATGAAGGTGTACTTGTCATACATGGGTGCTGCATATAAAGGGGCTCTGATTCCTCTTATTATACTCGCACAAGCTGCTTTCCAATTTCTTCAGATTGCTAGTAATTGGTGGATGGCTTGGGCAAATCCTCAAACTGAAGGTGACGAATCTAAAGTGGATCCTACTCTGCTTCTCATCGTTTATACGGCTTTAGCTTTCGGGAGCTCTGTGTTCATATTTGTTCGAGCTGCTCTGGTTGCAACTTTTGGTCTTGCAGCTGCACAGAAACTGTTCTTAAATATGCTCAGAAGTGTGTTCCGAGCGCCAATGTCATTCTTTGATTCCACTCCTGCAGGAAGAATTTTGAATCGGGTTTCTATTGATCAAAGTGTTGTAGATCTTGACATTCCTTTTAGACTCGGTGGGTTTGCTTCAACAACAATACAACTCTGTGGCATTGTCGCTGTAATGACCAATGTTACCTGGCAAGTTTTCCTTCTTGTTGTTCCGGTAGCTGTTGCTTGCTTTTGGATGCAGAAATATTACATGGCTTCTTCAAGAGAATTGGTTCGGATAGTTAGTATCCAGAAGTCTCCAATAATTCATCTTTTTGGAGAATCAATTGCTGGTGCTGCCACAATAAGAGGATTTGGCCAGGAAAAAAGATTTATCAAAAGGAATCTTTATCTTCTAGATTGTTTTGTTCGACCTTTCTTCTGCAGTATCGCTGCTATCGAATGGCTTTGTTTACGCATGGAATTACTTTCCACACTTGTATTTGCTTTCTGTATGGTTTTACTCGTCAGTTTTCCACATGGAACCATTGATCCAAGCATGGCAGGTCTTGCTGTGACATATGGACTTAACTTGAATGGACGTCTATCACGATGGATACTTAGCTTTTGTAAGCTTGAAAACAAAATAATCTCAATCGAAAGGATTTATCAGTACAGTCAGATTGTAGGAGAGGCCCCAGCAATTATAGAAGATTTCCGCCCGCCTTCCTCGTGGCCTGCAACGGGAACAATTGAGCTAGTTGATGTTAAGGTTCGTTATGCTGAGAATCTTCCAACAGTACTCCATGGGGTGAGCTGTGTGTTTCCGGGTGGAAAAAAGATTGGGATTGTTGGGCGAACGGGAAGCGGAAAGTCGACTTTGATTCAAGCTTTGTTTCGATTGATTGAGCCAACTGCTGGAAAAATTACTATTGACAACATTGACATTTCTCAAATTGGTCTTCATGATCTTCGTAGTCGCCTTGGGATTATACCTCAAGATCCTACATTATTTGAAGGAACAATCCGAGCAAATCTTGACCCACTTGAAGAACATTCAGATGATAAAATCTGGGAGGCGCTTGATAAATCCCAGCTTGGAGACGTTGTTAGAGGAAAAGACCTAAAACTTGACTCTCCAGTACTGGAAAATGGAGATAACTGGAGTGTAGGGCAGAGACAGCTTGTGTCACTTGGACGAGCATTACTGAAACAAGCCAAAATACTTGTTCTTGATGAAGCAACAGCATCGGTTGACACAGCAACAGACAATCTGATCCAGAAGATAATCAGAACAGAGTTTGAAGACTGCACGGTCTGCACCATTGCTCACCGGATACCAACTGTTATAGACAGTGACCTAGTTTTGGTTCTCAGCGACGGTAGAGTAGCAGAGTTTGATACTCCTGCACGGCTATTAGAAGACAAATCATCGATGTTCTTGAAATTGGTAACAGAATACTCCTCAAGATCTACTGGAATCCCTGAATTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0001101 GO:0003674 GO:0003824 GO:0004888 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006873 GO:0006875 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008281 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009987 GO:0010033 GO:0010118 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019725 GO:0022804 GO:0022857 GO:0023052 GO:0030003 GO:0030004 GO:0030007 GO:0031090 GO:0032870 GO:0033993 GO:0038023 GO:0042221 GO:0042592 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0055085 GO:0060089 GO:0065007 GO:0065008 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0097305 GO:0097306 GO:0098588 GO:0098771 GO:0098805 GO:1901527 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

1514

Amino Acids

168.57

Weight (kDa)

7.64

Isoelectric Point (pI)

40.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	311 - 576	8.9e-30	ABC transporter transmembrane region
ABC_tran	PF00005	640 - 774	6.7e-19	ABC transporter
ABC_membrane	PF00664	951 - 1193	1e-30	ABC transporter transmembrane region
ABC_tran	PF00005	1285 - 1428	1.8e-28	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007932)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04120 AT1G04120 AT1G04120
fragaria_vesca	FvH4_2g20350 FvH4_2g20350 FvH4_2g20350
malus_domestica	MD05G1187600.v1.1 MD10G1175300.v1.1
prunus_persica	Prupe.8G214600_v2.0.a1 Prupe.8G214600_v2.0.a1 Prupe.8G214600_v2.0.a1
pyrus_communis	pycom05g17240 pycom10g15100
rosa_chinensis	RchiOBHm_Chr6g0286471
rosa_laevigata	RLG00000012569
rosa_multiflora	Rmu_sc0034370.1_g000001
rosa_roxburghii	Rroxscaffold_7G00182310
rosa_rugosa	Rorug06G0179900 Rorug06G0180000
rosa_samantha	Rh6AG292200 Rh6BG295800 Rh6CG296500 Rh6DG288300
rosa_wichuraiana	Rw6G025200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	568
AasI	GACNNNNNNGTC	1 cut(s)	4364
AatII	GACGTC	1 cut(s)	3655
Acc36I	ACCTGC	3 cut(s)	568, 2495, 3605
AccB7I	CCANNNNNTGG	2 cut(s)	280, 3968
AccBSI	CCGCTC	1 cut(s)	1206
AccI	GTMKAC	2 cut(s)	1155, 3926
AccII	CGCG	2 cut(s)	113, 2607
AclWI	GGATC	8 cut(s)	728, 741, 2698, 2948, 2961, 3596, 4046, 4321
AcoI	YGGCCR	1 cut(s)	3427
AcsI	RAATTY	2 cut(s)	1710, 3135
AcuI	CTGAAG	6 cut(s)	396, 1700, 2474, 2682, 2870, 2952
AcyI	GRCGYC	2 cut(s)	270, 3652
AfiI	CCNNNNNNNGG	7 cut(s)	280, 566, 1031, 1095, 3794, 3968, 4417
AflII	CTTAAG	1 cut(s)	773
AjnI	CCWGG	5 cut(s)	450, 587, 1404, 3257, 3429
AloI	GAACNNNNNNTCC	4 cut(s)	508, 540, 3586, 3618
Alw21I	GWGCWC	2 cut(s)	2329, 3002
Alw26I	GTCTC	8 cut(s)	112, 1070, 1172, 2076, 2654, 3372, 4146, 4222
AlwI	GGATC	8 cut(s)	728, 741, 2698, 2948, 2961, 3596, 4046, 4321
AlwNI	CAGNNNCTG	3 cut(s)	327, 2510, 3064
AoxI	GGCC	6 cut(s)	585, 1910, 2520, 3427, 3744, 3785
ApoI	RAATTY	2 cut(s)	1710, 3135
Asp700I	GAANNNNTTC	4 cut(s)	1812, 2112, 3065, 3342
AspA2I	CCTAGG	2 cut(s)	1117, 2011
AspLEI	GCGC	3 cut(s)	1245, 3100, 4132
AspS9I	GGNCC	5 cut(s)	971, 1402, 1894, 2206, 3745
AsuC2I	CCSGG	1 cut(s)	3879
AsuHPI	GGTGA	6 cut(s)	445, 1075, 1220, 2948, 3874, 4373
AsuII	TTCGAA	1 cut(s)	1853
AsuNHI	GCTAGC	1 cut(s)	499
AvaII	GGWCC	4 cut(s)	971, 1402, 1894, 2206
AvrII	CCTAGG	2 cut(s)	1117, 2011
BalI	TGGCCA	1 cut(s)	3429
BamHI	GGATCC	2 cut(s)	733, 2953
BanII	GRGCYC	2 cut(s)	2842, 3002
BarI	GAAGNNNNNNTAC	2 cut(s)	1023, 1055
BauI	CACGAG	3 cut(s)	888, 1201, 3781
BbsI	GAAGAC	6 cut(s)	402, 1416, 2589, 4004, 4362, 4479
Bbv12I	GWGCWC	2 cut(s)	2329, 3002
BccI	CCATC	6 cut(s)	290, 482, 1750, 1871, 2902, 3657
BceAI	ACGGC	3 cut(s)	917, 2997, 4478
BcgI	CGANNNNNNTGC	2 cut(s)	4281, 4315
BciT130I	CCWGG	5 cut(s)	452, 589, 1406, 3259, 3431
BciVI	GTATCC	4 cut(s)	1028, 3368, 3660, 4380
BclI	TGATCA	2 cut(s)	981, 3157
BcnI	CCSGG	1 cut(s)	3879
BcoDI	GTCTC	8 cut(s)	112, 1070, 1172, 2076, 2654, 3372, 4146, 4222
BfmI	CTRYAG	4 cut(s)	1344, 2430, 3126, 3493
BfoI	RGCGCY	2 cut(s)	3101, 4133
BfrI	CTTAAG	1 cut(s)	773
BfuAI	ACCTGC	3 cut(s)	568, 2495, 3605
BfuI	GTATCC	4 cut(s)	1028, 3368, 3660, 4380
BglII	AGATCT	4 cut(s)	15, 2701, 3172, 4520
BlnI	CCTAGG	2 cut(s)	1117, 2011
BlpI	GCTNAGC	1 cut(s)	2736
BmcAI	AGTACT	3 cut(s)	694, 3852, 4194
Bme1390I	CCNGG	6 cut(s)	452, 589, 1406, 3259, 3431, 3879
Bme18I	GGWCC	4 cut(s)	971, 1402, 1894, 2206
BmgT120I	GGNCC	5 cut(s)	971, 1402, 1894, 2206, 3745
BmiI	GGNNCC	9 cut(s)	449, 735, 1722, 1895, 1896, 2207, 2955, 3595, 3747
BmrFI	CCNGG	6 cut(s)	452, 589, 1406, 3259, 3431, 3879
BmtI	GCTAGC	1 cut(s)	503
BpiI	GAAGAC	6 cut(s)	402, 1416, 2589, 4004, 4362, 4479
BplI	GAGNNNNNCTC	4 cut(s)	138, 170, 2180, 2212
BpmI	CTGGAG	4 cut(s)	610, 1698, 4173, 4234
Bpu10I	CCTNAGC	2 cut(s)	377, 1398
Bpu1102I	GCTNAGC	1 cut(s)	2736
Bpu14I	TTCGAA	1 cut(s)	1853
BpuEI	CTTGAG	3 cut(s)	788, 4032, 4501
BpuMI	CCSGG	1 cut(s)	3879
Bsa29I	ATCGAT	1 cut(s)	4484
BsaAI	YACGTR	1 cut(s)	1039
BsaBI	GATNNNNATC	1 cut(s)	2595
BsaHI	GRCGYC	2 cut(s)	270, 3652
BsaI	GGTCTC	1 cut(s)	1172
BsaJI	CCNNGG	5 cut(s)	1117, 1841, 2011, 3856, 4033
BsaWI	WCCGGW	2 cut(s)	3283, 4383
BsaXI	ACNNNNNCTCC	4 cut(s)	508, 538, 4143, 4173
Bsc4I	CCNNNNNNNGG	7 cut(s)	280, 566, 1031, 1095, 3794, 3968, 4417
Bse1I	ACTGG	9 cut(s)	54, 332, 1093, 2065, 2347, 4190, 4200, 4217, 4531
Bse3DI	GCAATG	4 cut(s)	934, 1155, 2562, 4374
Bse8I	GATNNNNATC	1 cut(s)	2595
BseBI	CCWGG	5 cut(s)	452, 589, 1406, 3259, 3431
BseCI	ATCGAT	1 cut(s)	4484
BseDI	CCNNGG	5 cut(s)	1117, 1841, 2011, 3856, 4033
BseGI	GGATG	6 cut(s)	1128, 1287, 2007, 2562, 2913, 3312
BseJI	GATNNNNATC	1 cut(s)	2595
BseLI	CCNNNNNNNGG	7 cut(s)	280, 566, 1031, 1095, 3794, 3968, 4417
BseMI	GCAATG	4 cut(s)	934, 1155, 2562, 4374
BseNI	ACTGG	9 cut(s)	54, 332, 1093, 2065, 2347, 4190, 4200, 4217, 4531
BseRI	GAGGAG	4 cut(s)	616, 1562, 2566, 4504
BseYI	CCCAGC	5 cut(s)	698, 941, 1046, 3748, 4143
BsgI	GTGCAG	4 cut(s)	3039, 4345, 4354, 4443
Bsh1236I	CGCG	2 cut(s)	113, 2607
BshFI	GGCC	6 cut(s)	587, 1912, 2522, 3429, 3746, 3787
BshVI	ATCGAT	1 cut(s)	4484
BsiHKAI	GWGCWC	2 cut(s)	2329, 3002
BsiSI	CCGG	3 cut(s)	3284, 3878, 4384
BslFI	GGGAC	4 cut(s)	1860, 1907, 2219, 2556
BslI	CCNNNNNNNGG	7 cut(s)	280, 566, 1031, 1095, 3794, 3968, 4417
BsmAI	GTCTC	8 cut(s)	112, 1070, 1172, 2076, 2654, 3372, 4146, 4222
BsmBI	CGTCTC	1 cut(s)	4146
BsmFI	GGGAC	4 cut(s)	1860, 1907, 2219, 2556
BsnI	GGCC	6 cut(s)	587, 1912, 2522, 3429, 3746, 3787
Bso31I	GGTCTC	1 cut(s)	1172
Bsp119I	TTCGAA	1 cut(s)	1853
Bsp1286I	GDGCHC	3 cut(s)	2329, 2842, 3002
Bsp1407I	TGTACA	1 cut(s)	2263
Bsp1720I	GCTNAGC	1 cut(s)	2736
Bsp19I	CCATGG	1 cut(s)	3856
Bsp68I	TCGCGA	1 cut(s)	2607
BspANI	GGCC	6 cut(s)	587, 1912, 2522, 3429, 3746, 3787
BspDI	ATCGAT	1 cut(s)	4484
BspFNI	CGCG	2 cut(s)	113, 2607
BspHI	TCATGA	3 cut(s)	1027, 1270, 4015
BspLI	GGNNCC	9 cut(s)	449, 735, 1722, 1895, 1896, 2207, 2955, 3595, 3747
BspMAI	CTGCAG	3 cut(s)	2434, 3130, 3497
BspMI	ACCTGC	3 cut(s)	568, 2495, 3605
BspOI	GCTAGC	1 cut(s)	503
BspPI	GGATC	8 cut(s)	728, 741, 2698, 2948, 2961, 3596, 4046, 4321
BspT104I	TTCGAA	1 cut(s)	1853
BspTI	CTTAAG	1 cut(s)	773
BspTNI	GGTCTC	1 cut(s)	1172
BsrBI	CCGCTC	1 cut(s)	1206
BsrDI	GCAATG	4 cut(s)	934, 1155, 2562, 4374
BsrGI	TGTACA	1 cut(s)	2263
BsrI	ACTGG	9 cut(s)	54, 332, 1093, 2065, 2347, 4190, 4200, 4217, 4531
BssECI	CCNNGG	5 cut(s)	1117, 1841, 2011, 3856, 4033
BssNAI	GTATAC	1 cut(s)	1156
BssNI	GRCGYC	2 cut(s)	270, 3652
BssSI	CACGAG	3 cut(s)	888, 1201, 3781
BssT1I	CCWWGG	4 cut(s)	1117, 2011, 3856, 4033
Bst1107I	GTATAC	1 cut(s)	1156
Bst2BI	CACGAG	3 cut(s)	888, 1201, 3781
Bst2UI	CCWGG	5 cut(s)	452, 589, 1406, 3259, 3431
Bst6I	CTCTTC	6 cut(s)	133, 307, 654, 839, 1539, 2763
BstACI	GRCGYC	2 cut(s)	270, 3652
BstAFI	CTTAAG	1 cut(s)	773
BstAPI	GCANNNNNTGC	3 cut(s)	2870, 3620, 4368
BstAUI	TGTACA	1 cut(s)	2263
BstBAI	YACGTR	1 cut(s)	1039
BstBI	TTCGAA	1 cut(s)	1853
BstC8I	GCNNGC	7 cut(s)	501, 925, 1500, 2502, 3298, 3773, 3789
BstDSI	CCRYGG	2 cut(s)	1841, 3856
BstENI	CCTNNNNNAGG	1 cut(s)	1029
BstF5I	GGATG	6 cut(s)	1128, 1287, 2007, 2562, 2913, 3312
BstFNI	CGCG	2 cut(s)	113, 2607
BstH2I	RGCGCY	2 cut(s)	3101, 4133
BstHHI	GCGC	3 cut(s)	1245, 3100, 4132
BstMAI	GTCTC	8 cut(s)	112, 1070, 1172, 2076, 2654, 3372, 4146, 4222
BstNI	CCWGG	5 cut(s)	452, 589, 1406, 3259, 3431
BstNSI	RCATGY	2 cut(s)	1130, 2169
BstSCI	CCNGG	6 cut(s)	450, 587, 1404, 3257, 3429, 3877
BstSFI	CTRYAG	4 cut(s)	1344, 2430, 3126, 3493
BstSNI	TACGTA	1 cut(s)	1039
BstUI	CGCG	2 cut(s)	113, 2607
BstV2I	GAAGAC	6 cut(s)	402, 1416, 2589, 4004, 4362, 4479
BstX2I	RGATCY	8 cut(s)	15, 733, 2690, 2701, 2953, 3172, 4051, 4520
BstYI	RGATCY	8 cut(s)	15, 733, 2690, 2701, 2953, 3172, 4051, 4520
BstZ17I	GTATAC	1 cut(s)	1156
Bsu15I	ATCGAT	1 cut(s)	4484
BsuI	GTATCC	4 cut(s)	1028, 3368, 3660, 4380
BsuRI	GGCC	6 cut(s)	587, 1912, 2522, 3429, 3746, 3787
BsuTUI	ATCGAT	1 cut(s)	4484
BtgI	CCRYGG	2 cut(s)	1841, 3856
BtsCI	GGATG	6 cut(s)	1128, 1287, 2007, 2562, 2913, 3312
BtsIMutI	CAGTG	4 cut(s)	328, 1100, 2340, 4411
BtuMI	TCGCGA	1 cut(s)	2607
BveI	ACCTGC	3 cut(s)	568, 2495, 3605
Cac8I	GCNNGC	7 cut(s)	501, 925, 1500, 2502, 3298, 3773, 3789
CaiI	CAGNNNCTG	3 cut(s)	327, 2510, 3064
CciI	TCATGA	3 cut(s)	1027, 1270, 4015
CfoI	GCGC	3 cut(s)	1245, 3100, 4132
Cfr13I	GGNCC	5 cut(s)	971, 1402, 1894, 2206, 3745
ClaI	ATCGAT	1 cut(s)	4484
CseI	GACGC	1 cut(s)	259
DrdI	GACNNNNNNGTC	1 cut(s)	4364
DseDI	GACNNNNNNGTC	1 cut(s)	4364
EaeI	YGGCCR	1 cut(s)	3427
Eam1104I	CTCTTC	6 cut(s)	133, 307, 654, 839, 1539, 2763
EarI	CTCTTC	6 cut(s)	133, 307, 654, 839, 1539, 2763
EciI	GGCGGA	1 cut(s)	3758
Ecl136II	GAGCTC	1 cut(s)	3000
Eco105I	TACGTA	1 cut(s)	1039
Eco130I	CCWWGG	4 cut(s)	1117, 2011, 3856, 4033
Eco147I	AGGCCT	1 cut(s)	2522
Eco24I	GRGCYC	2 cut(s)	2842, 3002
Eco31I	GGTCTC	1 cut(s)	1172
Eco32I	GATATC	1 cut(s)	1114
Eco47I	GGWCC	4 cut(s)	971, 1402, 1894, 2206
Eco53kI	GAGCTC	1 cut(s)	3000
Eco57I	CTGAAG	6 cut(s)	396, 1700, 2474, 2682, 2870, 2952
EcoICRI	GAGCTC	1 cut(s)	3000
EcoNI	CCTNNNNNAGG	1 cut(s)	1029
EcoO109I	RGGNCCY	2 cut(s)	1894, 3745
EcoRI	GAATTC	1 cut(s)	1710
EcoRII	CCWGG	5 cut(s)	450, 587, 1404, 3257, 3429
EcoRV	GATATC	1 cut(s)	1114
EcoT14I	CCWWGG	4 cut(s)	1117, 2011, 3856, 4033
EcoT22I	ATGCAT	1 cut(s)	1128
EcoT38I	GRGCYC	2 cut(s)	2842, 3002
ErhI	CCWWGG	4 cut(s)	1117, 2011, 3856, 4033
Esp3I	CGTCTC	1 cut(s)	4146
FalI	AAGNNNNNCTT	6 cut(s)	410, 442, 2792, 2824, 3255, 3287
FaqI	GGGAC	4 cut(s)	1860, 1907, 2219, 2556
FauI	CCCGC	3 cut(s)	1097, 2753, 3780
FauNDI	CATATG	1 cut(s)	3631
FbaI	TGATCA	2 cut(s)	981, 3157
FblI	GTMKAC	2 cut(s)	1155, 3926
FokI	GGATG	6 cut(s)	1135, 1294, 1994, 2549, 2920, 3319
FriOI	GRGCYC	2 cut(s)	2842, 3002
GlaI	GCGC	3 cut(s)	1244, 3099, 4131
GsaI	CCCAGC	5 cut(s)	702, 945, 1050, 3752, 4147
GsuI	CTGGAG	4 cut(s)	610, 1698, 4173, 4234
HaeII	RGCGCY	2 cut(s)	3101, 4133
HaeIII	GGCC	6 cut(s)	587, 1912, 2522, 3429, 3746, 3787
HapII	CCGG	3 cut(s)	3284, 3878, 4384
HgaI	GACGC	1 cut(s)	259
HhaI	GCGC	3 cut(s)	1245, 3100, 4132
Hin1I	GRCGYC	2 cut(s)	270, 3652
Hin6I	GCGC	3 cut(s)	1243, 3098, 4130
HinP1I	GCGC	3 cut(s)	1243, 3098, 4130
HincII	GTYRAC	3 cut(s)	208, 3927, 4306
HindII	GTYRAC	3 cut(s)	208, 3927, 4306
HindIII	AAGCTT	3 cut(s)	1067, 3683, 3939
HpaI	GTTAAC	1 cut(s)	208
HpaII	CCGG	3 cut(s)	3284, 3878, 4384
HphI	GGTGA	6 cut(s)	445, 1075, 1220, 2948, 3874, 4373
Hpy166II	GTNNAC	8 cut(s)	208, 1156, 1219, 2264, 2806, 3524, 3927, 4306
Hpy8I	GTNNAC	8 cut(s)	208, 1156, 1219, 2264, 2806, 3524, 3927, 4306
Hpy99I	CGWCG	1 cut(s)	4433
HpyCH4IV	ACGT	4 cut(s)	1038, 1061, 3652, 4155
HpySE526I	ACGT	4 cut(s)	1038, 1061, 3652, 4155
Hsp92I	GRCGYC	2 cut(s)	270, 3652
HspAI	GCGC	3 cut(s)	1243, 3098, 4130
KflI	GGGWCCC	1 cut(s)	1894
Ksp22I	TGATCA	2 cut(s)	981, 3157
KspAI	GTTAAC	1 cut(s)	208
LmnI	GCTCC	4 cut(s)	516, 629, 1720, 2997
MaeII	ACGT	4 cut(s)	1038, 1061, 3652, 4155
MbiI	CCGCTC	1 cut(s)	1206
MfeI	CAATTG	2 cut(s)	3396, 3801
MflI	RGATCY	8 cut(s)	15, 733, 2690, 2701, 2953, 3172, 4051, 4520
MhlI	GDGCHC	3 cut(s)	2329, 2842, 3002
MlsI	TGGCCA	1 cut(s)	3429
MluNI	TGGCCA	1 cut(s)	3429
MlyI	GAGTC	3 cut(s)	2579, 3186, 4178
MmeI	TCCRAC	3 cut(s)	494, 711, 3869
Mox20I	TGGCCA	1 cut(s)	3429
Mph1103I	ATGCAT	1 cut(s)	1128
MroXI	GAANNNNTTC	4 cut(s)	1812, 2112, 3065, 3342
MscI	TGGCCA	1 cut(s)	3429
MslI	CAYNNNNRTG	3 cut(s)	216, 2801, 4110
Msp20I	TGGCCA	1 cut(s)	3429
MspA1I	CMGCKG	4 cut(s)	1676, 2244, 2435, 3053
MspCI	CTTAAG	1 cut(s)	773
MspI	CCGG	3 cut(s)	3284, 3878, 4384
MspR9I	CCNGG	6 cut(s)	452, 589, 1406, 3259, 3431, 3879
MunI	CAATTG	2 cut(s)	3396, 3801
MvaI	CCWGG	5 cut(s)	452, 589, 1406, 3259, 3431
MvnI	CGCG	2 cut(s)	113, 2607
NciI	CCSGG	1 cut(s)	3879
NcoI	CCATGG	1 cut(s)	3856
NdeI	CATATG	1 cut(s)	3631
NheI	GCTAGC	1 cut(s)	499
NlaIV	GGNNCC	9 cut(s)	449, 735, 1722, 1895, 1896, 2207, 2955, 3595, 3747
NmeAIII	GCCGAG	1 cut(s)	725
NmuCI	GTSAC	7 cut(s)	323, 1081, 1381, 2936, 3625, 4239, 4406
NruI	TCGCGA	1 cut(s)	2607
NsiI	ATGCAT	1 cut(s)	1128
NspI	RCATGY	2 cut(s)	1130, 2169
NspV	TTCGAA	1 cut(s)	1853
PagI	TCATGA	3 cut(s)	1027, 1270, 4015
PaqCI	CACCTGC	1 cut(s)	568
PceI	AGGCCT	1 cut(s)	2522
PcsI	WCGNNNNNNNCGW	2 cut(s)	3507, 3658
PdmI	GAANNNNTTC	4 cut(s)	1812, 2112, 3065, 3342
PflMI	CCANNNNNTGG	2 cut(s)	280, 3968
PfoI	TCCNGGA	1 cut(s)	1404
PleI	GAGTC	3 cut(s)	2579, 3186, 4178
PpsI	GAGTC	3 cut(s)	2579, 3186, 4178
Ppu21I	YACGTR	1 cut(s)	1039
PpuMI	RGGWCCY	1 cut(s)	1894
Psp124BI	GAGCTC	1 cut(s)	3002
Psp5II	RGGWCCY	1 cut(s)	1894
Psp6I	CCWGG	5 cut(s)	450, 587, 1404, 3257, 3429
PspFI	CCCAGC	5 cut(s)	698, 941, 1046, 3748, 4143
PspGI	CCWGG	5 cut(s)	450, 587, 1404, 3257, 3429
PspN4I	GGNNCC	9 cut(s)	449, 735, 1722, 1895, 1896, 2207, 2955, 3595, 3747
PspPI	GGNCC	5 cut(s)	971, 1402, 1894, 2206, 3745
PspPPI	RGGWCCY	1 cut(s)	1894
PstI	CTGCAG	3 cut(s)	2434, 3130, 3497
PstNI	CAGNNNCTG	3 cut(s)	327, 2510, 3064
PsuI	RGATCY	8 cut(s)	15, 733, 2690, 2701, 2953, 3172, 4051, 4520
PvuII	CAGCTG	2 cut(s)	2435, 3053
RruI	TCGCGA	1 cut(s)	2607
RseI	CAYNNNNRTG	3 cut(s)	216, 2801, 4110
SacI	GAGCTC	1 cut(s)	3002
SalI	GTCGAC	1 cut(s)	3925
Sau96I	GGNCC	5 cut(s)	971, 1402, 1894, 2206, 3745
SbfI	CCTGCAGG	1 cut(s)	3130
ScaI	AGTACT	3 cut(s)	694, 3852, 4194
SchI	GAGTC	3 cut(s)	2579, 3186, 4178
ScrFI	CCNGG	6 cut(s)	452, 589, 1406, 3259, 3431, 3879
SdaI	CCTGCAGG	1 cut(s)	3130
SduI	GDGCHC	3 cut(s)	2329, 2842, 3002
SfcI	CTRYAG	4 cut(s)	1344, 2430, 3126, 3493
SfuI	TTCGAA	1 cut(s)	1853
SinI	GGWCC	4 cut(s)	971, 1402, 1894, 2206
SmiMI	CAYNNNNRTG	3 cut(s)	216, 2801, 4110
SmlI	CTYRAG	4 cut(s)	767, 773, 4047, 4516
SmoI	CTYRAG	4 cut(s)	767, 773, 4047, 4516
SnaBI	TACGTA	1 cut(s)	1039
Sse8387I	CCTGCAGG	1 cut(s)	3130
SseBI	AGGCCT	1 cut(s)	2522
SspI	AATATT	2 cut(s)	2445, 3317
SstI	GAGCTC	1 cut(s)	3002
StuI	AGGCCT	1 cut(s)	2522
StyD4I	CCNGG	6 cut(s)	450, 587, 1404, 3257, 3429, 3877
StyI	CCWWGG	4 cut(s)	1117, 2011, 3856, 4033
TaiI	ACGT	4 cut(s)	1041, 1064, 3655, 4158
TaqII	GACCGA	2 cut(s)	52, 959
TatI	WGTACW	9 cut(s)	473, 692, 2145, 2263, 2677, 2805, 3723, 3850, 4192
TauI	GCSGC	1 cut(s)	1631
TscAI	CASTG	4 cut(s)	328, 1100, 2347, 4411
TseFI	GTSAC	7 cut(s)	323, 1081, 1381, 2936, 3625, 4239, 4406
Tsp45I	GTSAC	7 cut(s)	323, 1081, 1381, 2936, 3625, 4239, 4406
TspRI	CASTG	4 cut(s)	328, 1100, 2347, 4411
Van91I	CCANNNNNTGG	2 cut(s)	280, 3968
Vha464I	CTTAAG	1 cut(s)	773
VpaK11BI	GGWCC	4 cut(s)	971, 1402, 1894, 2206
XagI	CCTNNNNNAGG	1 cut(s)	1029
XapI	RAATTY	2 cut(s)	1710, 3135
XbaI	TCTAGA	1 cut(s)	3466
XceI	RCATGY	2 cut(s)	1130, 2169
XcmI	CCANNNNNNNNNTGG	1 cut(s)	218
XmaJI	CCTAGG	2 cut(s)	1117, 2011
XmiI	GTMKAC	2 cut(s)	1155, 3926
XmnI	GAANNNNTTC	4 cut(s)	1812, 2112, 3065, 3342
ZraI	GACGTC	1 cut(s)	3653
ZrmI	AGTACT	3 cut(s)	694, 3852, 4194
Zsp2I	ATGCAT	1 cut(s)	1128

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.