Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0007932

Physical Location & Seq

Genomic Coordinates Forward (+)

20452351 .. 20458335

Gene Structure 5985 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g17240.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3807 bp

ATGAACCCGCTTCTTTCAATTGGGGCAAAGAGACCGCTTGAGATCAAGGACATTCCCCTTCTTGCACCACAAGATCGAGCCAAAACTAATTATAAGATCTTGAATTCAAATTGGGAGAAAGTGAAGGCTGAAAACCGTTCAGGACAGCCTTCTTTAGCCTGGGCAATTCTCCGGTCCTTTTGGAAGGAGGCAGCTTGTAATGCTGTATTTGCTGGATTAAATACTCTTGTTTCATATGTGGGTCCGTTTATGATTAGCTATTTTGTTGATTATTTGGGGGGGATAGAGACTTTCCCTCATGAAGGGTATATCCTTGCCGGTACTTTCTTTGCAGCAAAGCTTGTTGAGACCTTAACAACCCGGCAGTGGTATCTTGGGGTAGACATTTTGGGTATGCATGTAAGATCAGCTCTAACGGCAATGGTATACCGAAAGGGACTCAGACTTTCCAGCTCGGCCAAGCAAAGTCACACTAGTGGAGAGATTGTTAACTACATGGCTGTTGATGTGCAAAGGATAGGGGACTACTCTTGGTATCTCCAGGACATGTGGATGCTTCCTATGCAAATTATTCTCGCCCTTGCAATTTTGTACAAGAATGTTGGAATCGCTTCTGTTGCGACATTGATTGCCACCATTATCTCCATTGTTCTTACTGTTCCGGTGGCAAAGATACAAGAAGAATATCAAGACAAGTTGATGACTGCCAAGGATGAAAGAATGAGGAAGACTTCAGAGTGCCTGCGAAACATGAGGATTCTCAAGTTGCAAGCTTGGGAGGACCGGTACCGATTGCAGTTAGAGGAGATGCGTGGTGTGGAGTTCAAGTGGCTACGCAAAGCTCTCTACTCTCAAGCTTTTATTACATTCATGTTCTGGAGCTCTCCTATATTTGTTTCAGCCGTAACTTTTGGCACCTCTATATTCTTGGGTCACCAGCTGACTGCGGGTGGTGTTCTTTCTGCTCTAGCGACTTTCAGGATACTCCAAGAACCACTCAGGAATTTCCCTGACCTTGTATCAATGATGGCACAGACAAAAGTTTCCCTCGATCGAATTTCTGGATTCCTGCAGGAGGAAGAGTTGCAGGAGGACGCAACAATTGTCCTGCCACGAGGCATCTCAACCACGTCAATAGAAATTGAAGATGGTGTCTTTTGCTGGGACCCTTCCTCTCCCAGGCCAACATTATCAGGAATAAAGATGAAAGTGGAAAGAGGGATGCGTGTGGCTGTTTGTGGAATGGTTGGTGCTGGCAAGTCAAGCTTTCTCTCTTGCATCCTCGGTGAGATCCCGAAAATCTCCGGTGAAGTAAGGCTATGTGGTACTGCTGCTTATGTTCCTCAGTCAGCATGGATACAGTCTGGAAATATTGAAGAAAATATTCTTTTTGGTAGCCCAATGGATAAACCAAAGTACAAGAAGGTTATCCATGCTTGTTCACTGAAAAAGGATTTGGAACTTTTCTCACATGGAGACCAGACCATAATCGGTGATAGGGGTATAAATCTGAGTGGTGGCCAGAAGCAACGTGTGCAGCTCGCAAGGGCACTGTATCAAGATGCTGACATTTATTTACTTGATGACCCCTTTAGTGCAGTTGATGCACACACTGGTTCAGAGTTGTTTAAGGAATACATATTGACAGCATTAGAAGATAAAACTGTGGTCTTTGTGACCCATCAAGTTGAATTTCTGCCCGCTGCTGATTTGATACTGGTTCTTAAAGGAGGGCGCATCATACAGGCAGGAAAATATGATGATCTTTTACAGGCAGGAACTGATTTCAAATCACTAGTCTCAGCTCACCATGAAGCAATTGAAGCTATGGATATTCCCAGTAACTCATCGGGAGATTCAAATCAAAGCTTGTGTCTGGATACTGGGCTCCGAAAAAATTGTGATAAACCTAGCAGTAGTGTTGACTGTTTGGCAAAGGAAGTGCAAGAAGGTGTGTCAGCTTCAGAGCAGAAAGCAATTAAAGAGAAAAAGAAAGCAAAGCGCTCAAGAAAAAAGCAGCTTGTCCAAGAAGAGGAAAGGGTAAGAGGAAGGGTCAGCATGAAAGTCTACTTTTCGTATATGGCTGCAGCGTATAAAGGATTGCTGATTCCACCCATAATCATTGCACAAACAGTATTTCAGTTTCTTCAAATTGCTAGTAGTTGGTGGATGGCTTGGGCAAATCCCCAAACAGAAGTAGACCAACCGAAAGTGAGTTCGATGGTCCTTCTTTGTGTTTACATGGCCCTTGCATTCGGAAGCTCTTGGTTTATATTTGTTAGGGCTGTTTTGGTAGCTACGTTTGGTCTAGCGGCTGCTCAGAAATTGTTTGTGAAGATGCTTAGAAGTGTGTTCCGGGCACCAATGTCTTTCTTTGACTCTACTCCTGCTGGATCGATCTTGAATCGTGTATCAATTGATCAAAGTGTGGTGGATCTTGATATTCCTTTTAGACTTGGTGGGTTCGCTTCAACGACAATACAACTTATTGGTATTGTTGGTGTGATGACAACAGTTACCTGGCAAGTTTTGCTGCTTGTTATTCCTATGGCCATTGCTTGTTTGTGGATGCAGAAATACTACATGGCTTCATCAAGGGAACTGGTCCGAATTGTTAGCATCCAGAAGTCTCCAATTATCCATCTTTTTGGCGAGTCAATTGCTGGAGCTGCCACTATAAGAGGATTTGGACAAGAAAAAAGGTTCATGAAGAGGAACCTTTATCTTCTTGATTGTTTTGCTCGCCCTTTCTTCTGCAGTATTGCAGCTATTGAATGGCTCTGTCTGCGCATGGAATTACTCTCAACTTTTGTATTCGCTTTCTGCATGATTCTACTTGTGAGCTTTCCACATGTGAGGATCGATCCAAGCATGGCTGGCCTCGCTGTCACATATGGTCTGAATTTAAATGCACGCCTATCACGATGGATACTTAGCTTTTGCAAGCTTGAAAACAAAATTATTTCTATTGAAAGGATATATCAGTACAGTCAAATCCCAAGTGAAGCTCCATCCGTTATTGAGGATTCTCAACCTCCATCTACATGGCCAGAGAATGGAGCAATTGACATAATTGATTTAAAGGTTCGCTACAAGGAAAATCTTCCTGTTGTCCTTCATGGGGTTACTTGTAGTTTTCCCGGTGGAAAGAATATTGGAATTGTTGGGCGTACTGGAAGTGGTAAATCTACTTTGATCCAGGCATTATTTCGACTAATTGAACCATCAGCTGGGAGGATCCTTATAGACAATGTTGATATTTCGACAATTGGTCTTCATGATCTCCGAAGTCGTCTCAGTATCATTCCCCAGGATCCTACCTTATTTGAAGGGACCATTAGGCTCAATCTTGATCCCCTTGAAGAGCATTTCGATCATGAAATTTGGCAGGCACTTGACAAGTCTCAGCTTGGAGACATAATCCGTGAAAAGGAGCAAAAGCTTGATGCACCAGTACTGGAAAATGGAGATAATTGGAGTGTGGGTCAGCGGCAACTGGTTTCTCTCGGAAGAGCATTGCTTAAGCAGGCAAAAATATTGGTGCTTGATGAAGCGACAGCATCGGTTGATACAGCTACAGACAATCTTATCCAGAAAATTATTCGAACAGAGTTTAAGAACTGTACTGTGTGCACGATTGCACATCGTATCCCAACCGTCATTGATAGTGATCTAGTGCTGGTACTCAGTGATGGTCGAGTGGCAGAGTTTGATACTCCGATACGACTATTAGAAGATAAGTCATCCATGTTTCTAAAATTGGTAACAGAGTATTCATCTAGGTCGAGTGGCATACCAGAATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0001101 GO:0003674 GO:0003824 GO:0004888 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006873 GO:0006875 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008281 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009987 GO:0010033 GO:0010118 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019725 GO:0022804 GO:0022857 GO:0023052 GO:0030003 GO:0030004 GO:0030007 GO:0031090 GO:0032870 GO:0033993 GO:0038023 GO:0042221 GO:0042592 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0055085 GO:0060089 GO:0065007 GO:0065008 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0097305 GO:0097306 GO:0098588 GO:0098771 GO:0098805 GO:1901527 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

1269

Amino Acids

141.44

Weight (kDa)

8.28

Isoelectric Point (pI)

44.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007932)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04120 AT1G04120 AT1G04120
fragaria_vesca	FvH4_2g20350 FvH4_2g20350 FvH4_2g20350
malus_domestica	MD05G1187600.v1.1 MD10G1175300.v1.1
prunus_persica	Prupe.8G214600_v2.0.a1 Prupe.8G214600_v2.0.a1 Prupe.8G214600_v2.0.a1
pyrus_communis	pycom05g17240 pycom10g15100
rosa_chinensis	RchiOBHm_Chr6g0286471
rosa_laevigata	RLG00000012569
rosa_multiflora	Rmu_sc0034370.1_g000001
rosa_roxburghii	Rroxscaffold_7G00182310
rosa_rugosa	Rorug06G0179900 Rorug06G0180000
rosa_samantha	Rh6AG292200 Rh6BG295800 Rh6CG296500 Rh6DG288300
rosa_wichuraiana	Rw6G025200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	93
Acc16I	TGCGCA	1 cut(s)	2789
Acc65I	GGTACC	1 cut(s)	786
AccB1I	GGYRCC	3 cut(s)	786, 914, 2359
AccB7I	CCANNNNNTGG	2 cut(s)	3056, 3230
AccI	GTMKAC	4 cut(s)	381, 426, 2067, 2199
AciI	CCGC	6 cut(s)	8, 35, 947, 1701, 2312, 3490
AcoI	YGGCCR	4 cut(s)	456, 1519, 2550, 3047
AcsI	RAATTY	7 cut(s)	103, 1003, 1056, 1691, 2902, 3381, 3800
AcuI	CTGAAG	2 cut(s)	717, 1947
AfeI	AGCGCT	1 cut(s)	2003
AfiI	CCNNNNNNNGG	9 cut(s)	302, 366, 1075, 1179, 2032, 3056, 3121, 3230, 3430
AflII	CTTAAG	1 cut(s)	3521
AflIII	ACRYGT	3 cut(s)	546, 1531, 2851
AgeI	ACCGGT	1 cut(s)	783
AhdI	GACNNNNNGTC	1 cut(s)	3270
AhlI	ACTAGT	2 cut(s)	473, 1795
AjiI	CACGTC	1 cut(s)	1131
AjnI	CCWGG	6 cut(s)	158, 540, 1178, 2519, 3198, 3309
AjuI	GAANNNNNNNTTGG	2 cut(s)	1439, 1471
AleI	CACNNNNGTG	1 cut(s)	474
Alw21I	GWGCWC	2 cut(s)	884, 3635
Alw26I	GTCTC	9 cut(s)	25, 281, 341, 1470, 1804, 2634, 3299, 3408, 3408
Alw44I	GTGCAC	1 cut(s)	3631
AlwNI	CAGNNNCTG	1 cut(s)	1781
Aor51HI	AGCGCT	1 cut(s)	2003
AoxI	GGCC	7 cut(s)	456, 1181, 1519, 2244, 2550, 2878, 3047
ApaLI	GTGCAC	1 cut(s)	3631
ApoI	RAATTY	7 cut(s)	103, 1003, 1056, 1691, 2902, 3381, 3800
ArsI	GACNNNNNNTTYG	4 cut(s)	1782, 1814, 1858, 1890
AsiGI	ACCGGT	1 cut(s)	783
Asp700I	GAANNNNTTC	3 cut(s)	610, 1383, 3102
Asp718I	GGTACC	1 cut(s)	786
AspLEI	GCGC	3 cut(s)	1737, 2004, 2790
AspS9I	GGNCC	8 cut(s)	174, 242, 781, 1165, 2224, 2245, 2605, 3333
AsuC2I	CCSGG	3 cut(s)	361, 2357, 3141
AsuHPI	GGTGA	5 cut(s)	926, 1298, 1319, 1505, 1799
AsuII	TTCGAA	1 cut(s)	3604
AvaII	GGWCC	7 cut(s)	174, 242, 781, 1165, 2224, 2605, 3333
BaeGI	GKGCMC	3 cut(s)	1552, 2362, 3635
BalI	TGGCCA	3 cut(s)	1521, 2552, 3049
BamHI	GGATCC	2 cut(s)	3237, 3313
BanI	GGYRCC	3 cut(s)	786, 914, 2359
BanII	GRGCYC	2 cut(s)	884, 1890
BauI	CACGAG	1 cut(s)	1113
BbsI	GAAGAC	2 cut(s)	734, 3266
Bbv12I	GWGCWC	2 cut(s)	884, 3635
BceAI	ACGGC	2 cut(s)	432, 887
BcgI	CGANNNNNNTGC	2 cut(s)	2642, 2676
BciT130I	CCWGG	6 cut(s)	160, 542, 1180, 2521, 3200, 3311
BciVI	GTATCC	5 cut(s)	975, 1350, 1873, 2922, 3659
BclI	TGATCA	1 cut(s)	2419
BcnI	CCSGG	3 cut(s)	361, 2357, 3141
BcoDI	GTCTC	9 cut(s)	25, 281, 341, 1470, 1804, 2634, 3299, 3408, 3408
BcuI	ACTAGT	2 cut(s)	473, 1795
BfaI	CTAG	8 cut(s)	474, 968, 1796, 1911, 2157, 2309, 3674, 3780
BfmI	CTRYAG	4 cut(s)	1070, 2085, 2755, 3576
BfoI	RGCGCY	1 cut(s)	2005
BfrI	CTTAAG	1 cut(s)	3521
BfuI	GTATCC	5 cut(s)	975, 1350, 1873, 2922, 3659
BglII	AGATCT	1 cut(s)	96
BmcAI	AGTACT	1 cut(s)	3456
Bme1390I	CCNGG	9 cut(s)	160, 361, 542, 1180, 2357, 2521, 3141, 3200, 3311
Bme18I	GGWCC	7 cut(s)	174, 242, 781, 1165, 2224, 2605, 3333
BmeRI	GACNNNNNGTC	1 cut(s)	3270
BmgBI	CACGTC	1 cut(s)	1131
BmgT120I	GGNCC	8 cut(s)	174, 242, 781, 1165, 2224, 2245, 2605, 3333
BmrFI	CCNGG	9 cut(s)	160, 361, 542, 1180, 2357, 2521, 3141, 3200, 3311
BmrI	ACTGGG	2 cut(s)	1833, 1893
BmuI	ACTGGG	2 cut(s)	1833, 1893
BpiI	GAAGAC	2 cut(s)	734, 3266
BpmI	CTGGAG	3 cut(s)	524, 898, 2685
Bpu14I	TTCGAA	1 cut(s)	3604
BpuEI	CTTGAG	4 cut(s)	59, 746, 837, 1990
BpuMI	CCSGG	3 cut(s)	361, 2357, 3141
Bsa29I	ATCGAT	2 cut(s)	2396, 2862
BsaBI	GATNNNNATC	2 cut(s)	1860, 3669
BsaI	GGTCTC	3 cut(s)	25, 341, 1470
BsaJI	CCNNGG	5 cut(s)	159, 708, 1178, 1282, 3309
BsaWI	WCCGGW	4 cut(s)	171, 661, 783, 1304
Bsc4I	CCNNNNNNNGG	9 cut(s)	302, 366, 1075, 1179, 2032, 3056, 3121, 3230, 3430
Bse118I	RCCGGY	2 cut(s)	317, 783
Bse1I	ACTGG	9 cut(s)	1618, 1722, 1839, 1888, 2607, 3178, 3452, 3462, 3501
Bse3DI	GCAATG	4 cut(s)	426, 2121, 2553, 3515
Bse8I	GATNNNNATC	2 cut(s)	1860, 3669
BseBI	CCWGG	6 cut(s)	160, 542, 1180, 2521, 3200, 3311
BseCI	ATCGAT	2 cut(s)	2396, 2862
BseDI	CCNNGG	5 cut(s)	159, 708, 1178, 1282, 3309
BseGI	GGATG	9 cut(s)	558, 718, 1227, 1278, 2175, 2574, 2619, 3011, 3743
BseJI	GATNNNNATC	2 cut(s)	1860, 3669
BseLI	CCNNNNNNNGG	9 cut(s)	302, 366, 1075, 1179, 2032, 3056, 3121, 3230, 3430
BseMI	GCAATG	4 cut(s)	426, 2121, 2553, 3515
BseMII	CTCAG	9 cut(s)	454, 1012, 1358, 1502, 1815, 2333, 3310, 3419, 3700
BseNI	ACTGG	9 cut(s)	1618, 1722, 1839, 1888, 2607, 3178, 3452, 3462, 3501
BseRI	GAGGAG	1 cut(s)	818
BseSI	GKGCMC	3 cut(s)	1552, 2362, 3635
BseYI	CCCAGC	2 cut(s)	1161, 3230
BsgI	GTGCAG	2 cut(s)	1556, 1617
Bsh1285I	CGRYCG	1 cut(s)	1054
BshFI	GGCC	7 cut(s)	458, 1183, 1521, 2246, 2552, 2880, 3049
BshNI	GGYRCC	3 cut(s)	786, 914, 2359
BshTI	ACCGGT	1 cut(s)	783
BshVI	ATCGAT	2 cut(s)	2396, 2862
BsiEI	CGRYCG	1 cut(s)	1054
BsiHKAI	GWGCWC	2 cut(s)	884, 3635
BsiSI	CCGG	8 cut(s)	172, 318, 361, 662, 784, 1305, 2356, 3141
BslFI	GGGAC	4 cut(s)	450, 536, 1178, 3346
BslI	CCNNNNNNNGG	9 cut(s)	302, 366, 1075, 1179, 2032, 3056, 3121, 3230, 3430
BsmAI	GTCTC	9 cut(s)	25, 281, 341, 1470, 1804, 2634, 3299, 3408, 3408
BsmBI	CGTCTC	1 cut(s)	3299
BsmFI	GGGAC	4 cut(s)	450, 536, 1178, 3346
BsmI	GAATGC	1 cut(s)	2252
BsnI	GGCC	7 cut(s)	458, 1183, 1521, 2246, 2552, 2880, 3049
Bso31I	GGTCTC	3 cut(s)	25, 341, 1470
Bsp119I	TTCGAA	1 cut(s)	3604
Bsp1286I	GDGCHC	5 cut(s)	884, 1552, 1890, 2362, 3635
Bsp1407I	TGTACA	1 cut(s)	591
BspACI	CCGC	6 cut(s)	8, 35, 947, 1701, 2312, 3490
BspANI	GGCC	7 cut(s)	458, 1183, 1521, 2246, 2552, 2880, 3049
BspCNI	CTCAG	9 cut(s)	453, 1011, 1357, 1503, 1814, 2332, 3309, 3418, 3699
BspDI	ATCGAT	2 cut(s)	2396, 2862
BspHI	TCATGA	4 cut(s)	298, 2706, 3277, 3376
BspMAI	CTGCAG	3 cut(s)	1074, 2089, 2759
BspQI	GCTCTTC	2 cut(s)	3357, 3505
BspT104I	TTCGAA	1 cut(s)	3604
BspT107I	GGYRCC	3 cut(s)	786, 914, 2359
BspTI	CTTAAG	1 cut(s)	3521
BspTNI	GGTCTC	3 cut(s)	25, 341, 1470
BsrDI	GCAATG	4 cut(s)	426, 2121, 2553, 3515
BsrFI	RCCGGY	2 cut(s)	317, 783
BsrGI	TGTACA	1 cut(s)	591
BsrI	ACTGG	9 cut(s)	1618, 1722, 1839, 1888, 2607, 3178, 3452, 3462, 3501
BssAI	RCCGGY	2 cut(s)	317, 783
BssECI	CCNNGG	5 cut(s)	159, 708, 1178, 1282, 3309
BssNAI	GTATAC	1 cut(s)	427
BssSI	CACGAG	1 cut(s)	1113
BssT1I	CCWWGG	1 cut(s)	708
Bst1107I	GTATAC	1 cut(s)	427
Bst2BI	CACGAG	1 cut(s)	1113
Bst2UI	CCWGG	6 cut(s)	160, 542, 1180, 2521, 3200, 3311
Bst6I	CTCTTC	5 cut(s)	1074, 2025, 2705, 3357, 3505
BstAFI	CTTAAG	1 cut(s)	3521
BstAPI	GCANNNNNTGC	3 cut(s)	1534, 1604, 2530
BstAUI	TGTACA	1 cut(s)	591
BstBI	TTCGAA	1 cut(s)	3604
BstEII	GGTNACC	1 cut(s)	932
BstENI	CCTNNNNNAGG	3 cut(s)	300, 1073, 1177
BstF5I	GGATG	9 cut(s)	558, 718, 1227, 1278, 2175, 2574, 2619, 3011, 3743
BstH2I	RGCGCY	1 cut(s)	2005
BstHHI	GCGC	3 cut(s)	1737, 2004, 2790
BstMAI	GTCTC	9 cut(s)	25, 281, 341, 1470, 1804, 2634, 3299, 3408, 3408
BstMCI	CGRYCG	1 cut(s)	1054
BstNI	CCWGG	6 cut(s)	160, 542, 1180, 2521, 3200, 3311
BstNSI	RCATGY	3 cut(s)	401, 550, 2855
BstPI	GGTNACC	1 cut(s)	932
BstSCI	CCNGG	9 cut(s)	158, 359, 540, 1178, 2355, 2519, 3139, 3198, 3309
BstSFI	CTRYAG	4 cut(s)	1070, 2085, 2755, 3576
BstSLI	GKGCMC	3 cut(s)	1552, 2362, 3635
BstV2I	GAAGAC	2 cut(s)	734, 3266
BstX2I	RGATCY	5 cut(s)	96, 1290, 2434, 3237, 3313
BstXI	CCANNNNNNTGG	2 cut(s)	2648, 3045
BstYI	RGATCY	5 cut(s)	96, 1290, 2434, 3237, 3313
BstZ17I	GTATAC	1 cut(s)	427
Bsu15I	ATCGAT	2 cut(s)	2396, 2862
BsuI	GTATCC	5 cut(s)	975, 1350, 1873, 2922, 3659
BsuRI	GGCC	7 cut(s)	458, 1183, 1521, 2246, 2552, 2880, 3049
BsuTUI	ATCGAT	2 cut(s)	2396, 2862
BtrI	CACGTC	1 cut(s)	1131
BtsCI	GGATG	9 cut(s)	558, 718, 1227, 1278, 2175, 2574, 2619, 3011, 3743
BtsI	GCAGTG	1 cut(s)	371
BtsIMutI	CAGTG	5 cut(s)	371, 1442, 1550, 1611, 3694
CaiI	CAGNNNCTG	1 cut(s)	1781
CciI	TCATGA	4 cut(s)	298, 2706, 3277, 3376
CfoI	GCGC	3 cut(s)	1737, 2004, 2790
Cfr10I	RCCGGY	2 cut(s)	317, 783
Cfr13I	GGNCC	8 cut(s)	174, 242, 781, 1165, 2224, 2245, 2605, 3333
ClaI	ATCGAT	2 cut(s)	2396, 2862
CseI	GACGC	1 cut(s)	1103
CspAI	ACCGGT	1 cut(s)	783
DraI	TTTAAA	2 cut(s)	2907, 3081
DriI	GACNNNNNGTC	1 cut(s)	3270
EaeI	YGGCCR	4 cut(s)	456, 1519, 2550, 3047
Eam1104I	CTCTTC	5 cut(s)	1074, 2025, 2705, 3357, 3505
Eam1105I	GACNNNNNGTC	1 cut(s)	3270
EarI	CTCTTC	5 cut(s)	1074, 2025, 2705, 3357, 3505
Ecl136II	GAGCTC	1 cut(s)	882
Eco130I	CCWWGG	1 cut(s)	708
Eco24I	GRGCYC	2 cut(s)	884, 1890
Eco31I	GGTCTC	3 cut(s)	25, 341, 1470
Eco47I	GGWCC	7 cut(s)	174, 242, 781, 1165, 2224, 2605, 3333
Eco47III	AGCGCT	1 cut(s)	2003
Eco53kI	GAGCTC	1 cut(s)	882
Eco57I	CTGAAG	2 cut(s)	717, 1947
Eco91I	GGTNACC	1 cut(s)	932
EcoICRI	GAGCTC	1 cut(s)	882
EcoNI	CCTNNNNNAGG	3 cut(s)	300, 1073, 1177
EcoO109I	RGGNCCY	1 cut(s)	1165
EcoO65I	GGTNACC	1 cut(s)	932
EcoRI	GAATTC	1 cut(s)	103
EcoRII	CCWGG	6 cut(s)	158, 540, 1178, 2519, 3198, 3309
EcoT14I	CCWWGG	1 cut(s)	708
EcoT22I	ATGCAT	1 cut(s)	399
EcoT38I	GRGCYC	2 cut(s)	884, 1890
ErhI	CCWWGG	1 cut(s)	708
Esp3I	CGTCTC	1 cut(s)	3299
FalI	AAGNNNNNCTT	2 cut(s)	1250, 1282
FaqI	GGGAC	4 cut(s)	450, 536, 1178, 3346
FauI	CCCGC	3 cut(s)	15, 940, 1708
FauNDI	CATATG	2 cut(s)	235, 2893
FbaI	TGATCA	1 cut(s)	2419
FblI	GTMKAC	4 cut(s)	381, 426, 2067, 2199
FokI	GGATG	9 cut(s)	565, 725, 1234, 1265, 2182, 2581, 2606, 2998, 3730
FriOI	GRGCYC	2 cut(s)	884, 1890
FspBI	CTAG	8 cut(s)	474, 968, 1796, 1911, 2157, 2309, 3674, 3780
FspI	TGCGCA	1 cut(s)	2789
GlaI	GCGC	3 cut(s)	1736, 2003, 2789
GsaI	CCCAGC	2 cut(s)	1165, 3234
GsuI	CTGGAG	3 cut(s)	524, 898, 2685
HaeII	RGCGCY	1 cut(s)	2005
HaeIII	GGCC	7 cut(s)	458, 1183, 1521, 2246, 2552, 2880, 3049
HapII	CCGG	8 cut(s)	172, 318, 361, 662, 784, 1305, 2356, 3141
HgaI	GACGC	1 cut(s)	1103
HhaI	GCGC	3 cut(s)	1737, 2004, 2790
Hin6I	GCGC	3 cut(s)	1735, 2002, 2788
HinP1I	GCGC	3 cut(s)	1735, 2002, 2788
HincII	GTYRAC	2 cut(s)	490, 1924
HindII	GTYRAC	2 cut(s)	490, 1924
HindIII	AAGCTT	7 cut(s)	338, 771, 855, 1264, 1867, 2945, 3440
HpaI	GTTAAC	1 cut(s)	490
HpaII	CCGG	8 cut(s)	172, 318, 361, 662, 784, 1305, 2356, 3141
HphI	GGTGA	5 cut(s)	926, 1298, 1319, 1505, 1799
Hpy166II	GTNNAC	9 cut(s)	382, 427, 490, 1442, 1924, 2068, 2200, 2239, 3633
Hpy8I	GTNNAC	9 cut(s)	382, 427, 490, 1442, 1924, 2068, 2200, 2239, 3633
HpyCH4IV	ACGT	3 cut(s)	1130, 1531, 2300
HpySE526I	ACGT	3 cut(s)	1130, 1531, 2300
HspAI	GCGC	3 cut(s)	1735, 2002, 2788
KflI	GGGWCCC	1 cut(s)	1165
KpnI	GGTACC	1 cut(s)	790
Ksp22I	TGATCA	1 cut(s)	2419
KspAI	GTTAAC	1 cut(s)	490
LguI	GCTCTTC	2 cut(s)	3357, 3505
LmnI	GCTCC	6 cut(s)	879, 1893, 2666, 3013, 3059, 3433
MaeI	CTAG	8 cut(s)	474, 968, 1796, 1911, 2157, 2309, 3674, 3780
MaeII	ACGT	3 cut(s)	1130, 1531, 2300
MaeIII	GTNAC	9 cut(s)	467, 904, 932, 1675, 1841, 2515, 2887, 3124, 3763
MfeI	CAATTG	7 cut(s)	18, 1101, 1818, 2415, 2658, 3063, 3267
MflI	RGATCY	5 cut(s)	96, 1290, 2434, 3237, 3313
MhlI	GDGCHC	5 cut(s)	884, 1552, 1890, 2362, 3635
MlsI	TGGCCA	3 cut(s)	1521, 2552, 3049
MluNI	TGGCCA	3 cut(s)	1521, 2552, 3049
MlyI	GAGTC	3 cut(s)	432, 2372, 2663
MmeI	TCCRAC	1 cut(s)	583
Mox20I	TGGCCA	3 cut(s)	1521, 2552, 3049
Mph1103I	ATGCAT	1 cut(s)	399
MroXI	GAANNNNTTC	3 cut(s)	610, 1383, 3102
MscI	TGGCCA	3 cut(s)	1521, 2552, 3049
MslI	CAYNNNNRTG	3 cut(s)	474, 551, 3043
Msp20I	TGGCCA	3 cut(s)	1521, 2552, 3049
MspA1I	CMGCKG	4 cut(s)	940, 1703, 3230, 3490
MspCI	CTTAAG	1 cut(s)	3521
MspI	CCGG	8 cut(s)	172, 318, 361, 662, 784, 1305, 2356, 3141
MspR9I	CCNGG	9 cut(s)	160, 361, 542, 1180, 2357, 2521, 3141, 3200, 3311
MunI	CAATTG	7 cut(s)	18, 1101, 1818, 2415, 2658, 3063, 3267
Mva1269I	GAATGC	1 cut(s)	2252
MvaI	CCWGG	6 cut(s)	160, 542, 1180, 2521, 3200, 3311
NciI	CCSGG	3 cut(s)	361, 2357, 3141
NdeI	CATATG	2 cut(s)	235, 2893
NmeAIII	GCCGAG	1 cut(s)	434
NmuCI	GTSAC	4 cut(s)	467, 932, 1675, 2887
NsbI	TGCGCA	1 cut(s)	2789
NsiI	ATGCAT	1 cut(s)	399
NspI	RCATGY	3 cut(s)	401, 550, 2855
NspV	TTCGAA	1 cut(s)	3604
OliI	CACNNNNGTG	1 cut(s)	474
PagI	TCATGA	4 cut(s)	298, 2706, 3277, 3376
PciI	ACATGT	2 cut(s)	546, 2851
PciSI	GCTCTTC	2 cut(s)	3357, 3505
PcsI	WCGNNNNNNNCGW	1 cut(s)	2920
PctI	GAATGC	1 cut(s)	2252
PdmI	GAANNNNTTC	3 cut(s)	610, 1383, 3102
PfeI	GAWTC	8 cut(s)	606, 757, 1065, 1856, 2107, 2404, 2830, 3026
PflMI	CCANNNNNTGG	2 cut(s)	3056, 3230
PfoI	TCCNGGA	1 cut(s)	540
PinAI	ACCGGT	1 cut(s)	783
Ple19I	CGATCG	1 cut(s)	1054
PleI	GAGTC	3 cut(s)	432, 2372, 2662
PpsI	GAGTC	3 cut(s)	432, 2372, 2662
PpuMI	RGGWCCY	1 cut(s)	1165
PscI	ACATGT	2 cut(s)	546, 2851
PsiI	TTATAA	1 cut(s)	93
Psp124BI	GAGCTC	1 cut(s)	884
Psp5II	RGGWCCY	1 cut(s)	1165
Psp6I	CCWGG	6 cut(s)	158, 540, 1178, 2519, 3198, 3309
PspEI	GGTNACC	1 cut(s)	932
PspFI	CCCAGC	2 cut(s)	1161, 3230
PspGI	CCWGG	6 cut(s)	158, 540, 1178, 2519, 3198, 3309
PspPI	GGNCC	8 cut(s)	174, 242, 781, 1165, 2224, 2245, 2605, 3333
PspPPI	RGGWCCY	1 cut(s)	1165
PstI	CTGCAG	3 cut(s)	1074, 2089, 2759
PstNI	CAGNNNCTG	1 cut(s)	1781
PsuI	RGATCY	5 cut(s)	96, 1290, 2434, 3237, 3313
PvuI	CGATCG	1 cut(s)	1054
PvuII	CAGCTG	2 cut(s)	940, 3230
RseI	CAYNNNNRTG	3 cut(s)	474, 551, 3043
SacI	GAGCTC	1 cut(s)	884
SapI	GCTCTTC	2 cut(s)	3357, 3505
Sau96I	GGNCC	8 cut(s)	174, 242, 781, 1165, 2224, 2245, 2605, 3333
SbfI	CCTGCAGG	1 cut(s)	1074
ScaI	AGTACT	1 cut(s)	3456
SchI	GAGTC	3 cut(s)	432, 2372, 2663
ScrFI	CCNGG	9 cut(s)	160, 361, 542, 1180, 2357, 2521, 3141, 3200, 3311
SdaI	CCTGCAGG	1 cut(s)	1074
SduI	GDGCHC	5 cut(s)	884, 1552, 1890, 2362, 3635
SfcI	CTRYAG	4 cut(s)	1070, 2085, 2755, 3576
SfuI	TTCGAA	1 cut(s)	3604
SinI	GGWCC	7 cut(s)	174, 242, 781, 1165, 2224, 2605, 3333
SmiI	ATTTAAAT	1 cut(s)	2907
SmiMI	CAYNNNNRTG	3 cut(s)	474, 551, 3043
SmlI	CTYRAG	5 cut(s)	38, 761, 852, 2005, 3521
SmoI	CTYRAG	5 cut(s)	38, 761, 852, 2005, 3521
SpeI	ACTAGT	2 cut(s)	473, 1795
Sse8387I	CCTGCAGG	1 cut(s)	1074
SsiI	CCGC	6 cut(s)	8, 35, 947, 1701, 2312, 3490
SspI	AATATT	4 cut(s)	1372, 1384, 3154, 3537
SspMI	CTAG	8 cut(s)	474, 968, 1796, 1911, 2157, 2309, 3674, 3780
SstI	GAGCTC	1 cut(s)	884
StyD4I	CCNGG	9 cut(s)	158, 359, 540, 1178, 2355, 2519, 3139, 3198, 3309
StyI	CCWWGG	1 cut(s)	708
SwaI	ATTTAAAT	1 cut(s)	2907
TaiI	ACGT	3 cut(s)	1133, 1534, 2303
TatI	WGTACW	5 cut(s)	591, 1416, 2985, 3454, 3623
TauI	GCSGC	2 cut(s)	2315, 3493
TfiI	GAWTC	8 cut(s)	606, 757, 1065, 1856, 2107, 2404, 2830, 3026
TscAI	CASTG	5 cut(s)	371, 1449, 1557, 1618, 3694
TseFI	GTSAC	4 cut(s)	467, 932, 1675, 2887
Tsp45I	GTSAC	4 cut(s)	467, 932, 1675, 2887
TspGWI	ACGGA	3 cut(s)	234, 3004, 3413
TspRI	CASTG	5 cut(s)	371, 1449, 1557, 1618, 3694
Van91I	CCANNNNNTGG	2 cut(s)	3056, 3230
Vha464I	CTTAAG	1 cut(s)	3521
VneI	GTGCAC	1 cut(s)	3631
VpaK11BI	GGWCC	7 cut(s)	174, 242, 781, 1165, 2224, 2605, 3333
XagI	CCTNNNNNAGG	3 cut(s)	300, 1073, 1177
XapI	RAATTY	7 cut(s)	103, 1003, 1056, 1691, 2902, 3381, 3800
XceI	RCATGY	3 cut(s)	401, 550, 2855
XmiI	GTMKAC	4 cut(s)	381, 426, 2067, 2199
XmnI	GAANNNNTTC	3 cut(s)	610, 1383, 3102
XspI	CTAG	8 cut(s)	474, 968, 1796, 1911, 2157, 2309, 3674, 3780
ZrmI	AGTACT	1 cut(s)	3456
Zsp2I	ATGCAT	1 cut(s)	399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.