Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0007932

Physical Location & Seq

Genomic Coordinates Forward (+)

17101052 .. 17109203

Gene Structure 8152 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g20350.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4623 bp

ATGGGTTTCACTCTCTTGCTTCAAAAAATCCCAGCTTTTTCATCCTTCTTATCATTTCCAAACCCAGTTCAGCAATCCCGGATGACCCTTTTGGGAGCTGTGCAAGGTCTGCCCTTTCTGGAGCTCTCTTCAATTGTCATCAATTTGGCTCTGGTTCTTGCATTTCTGTTAGTTGTTTCGGTACGGCGGATGTTTGTCTGTCTGGGAAGGATTAGGGTGGTGAAGGATGAGTTGGGTTCGAATGGGAACCCAATTCGGCATGAAAGTAGTGTTGATGGGAGAATTCAAGAGGTTAGAGTCGGTACAGACTTTAAATTTTCAGTTTTTTGTTGCTTCTATGTGTTGTTTGTGCAAGTTGTGGTGTTGGGTTTTGATGGGGTTGGTTTGGTTAGAGGAGGAGGGGAGGTAGTGGATTGGTCTGTGCTTTGCTTACCAGCTGCCCAGGGATTAGCTTGGTCTGTGCTGAGCTTCTCGGTTTTGCATTGTAAGTTCAAGGGGGCCGAGAAATTGCCATTCCTGATGAGGGCTTGGTGGGTTGTGTCTTTTGTCATGTGCTTGTGCACTTTGTATGTTGATGGGAGAGGTTTTGTAGAAGAAGGCTCGATACACCTTCATTCTCATGTTGCGGCTAATTTTGCAGTCACACCGGCTCTAGCGTTTCTCTGTTTCCTTGCAATTAGGGGTGTGACGGGTGTGATTATTTGTAGAAATTCTGAGTTTCAAGAGCCATTGCTTGAAGAAGAAGCAGGGTGTCTTAAGGTTACTCCTTATAGTGATGCTGGGATATTCAGCTTGGCCACACTATCTTGGATAAACCCTCTTCTTTCAATTGGGGCAAAGAGACCGCTTGAGATTAAGGATATTCCTCTACTGGCACCAAAAGATCGAGCCAAGACCAACTACAAGGTCTTGAATTCAAATTGGGAGAAATTGAAGGCTGACAATCCTTCAAAGCATCCTTCTTTAGCCTGGGCAATTCTCAAGTCCTTTTGGAAGGAGGCAGCTTGTAATGCCATTTTTGCTGGCTTGAACACTCTTGTTTCATATGTGGGTCCGTATATGATCAGCTATTTCGTTGATTACTTGGGGGGAATAGAGACTTTCCCTCATGAAGGGTATATCCTTGCTGGGACTTTCTTTGCAGCAAAGCTAATTGAGACCTTAACAACCAGGCAATGGTATCTTGGGGTGGACATTTTGGGTATGCATGTAAGATCAGCTCTCACAGCAATGGTATACCGAAAGGGCCTCCGGCTTTCCAGCTCAGCCAAGCAAAGTCACACTAGTGGAGAGATTGTTAACTACATGGCTGTTGATGTGCAGAGGATAGGGGACTATTCCTGGTATCTCCATGACATATGGATGCTTCCAATGCAAATTGTCCTTGCCCTTGCAATTTTATACAAGAATGTTGGAATTGCTTCTGTTGCTACATTGATTGCCACCATTATCTCCATTGTTCTTACTGTTCCTTTGGCAAAGATACAAGAAGATTATCAAGACAAGTTGATGACTGCCAAGGATGAGAGGATGAGGAAGACTTCTGAGTGCCTGCGGAACATGAGAATTCTCAAGTTGCAAGCTTGGGAGGACAGATACCGACTGATGTTAGAGGAGATGCGTAGTGTGGAGTTTAAGTATCTACGCAAAGCCCTCTACTCACAAGCTTTTATCACATTCATGTTCTGGAGCTCACCTATATTTGTTTCAGCTGTCACCTTTGGTACTTCTATATTTTTGGGTACTCGTCTCACTGCAGGAAGTGTTCTTTCTGCTCTCGCCACTTTCAGGATCCTCCAAGAACCACTCAGGAATTTCCCTGACCTGGTATCAATGATGGCTCAGACAAAAGTTTCCCTTGATCGTATTTCTGGGTTCTTGCAGGAGGAAGAGTTACAGCAAGATGCAACAGTTGTCTTGCCACGGGGTATCACAAGCACATCAATAGAAATTAAAGATGGTGTGTTTAGTTGGGACCCTTCCTCTGCAAGACCAACATTATCAGGAGTACAAATGAAAGTGGAAAGAGGGATGCGTGTGGCTGTATGTGGAATGGTTGGTTCTGGAAAATCAAGTTTTCTTTCTTGCATCCTTGGGGAGATCCCGAAAATCTCTGGTGACGTAAAGTTATGCGGTTCTGCTGCTTATGTTTCTCAGTCTGCATGGATACAGTCCGGTAATATAGAAGAAAATATTCTTTTTGGTAGCCCTATGGAGAAACCAAAGTACAAGAAGGTTATCCATGCTTGTTCACTGAAAAGGGATTTGGAACTTTTCTCACATGGAGATCAGACCATAATTGGTGATAGGGGCATAAATTTGAGTGGTGGCCAGAAGCAACGTGTGCAGCTTGCAAGGGCACTCTATCAAGATGCTGACATTTATTTACTTGACGACCCCTTCAGTGCAGTTGATGCACACACTGGATCAGAGTTGTTTAAGGAATACATATTGACTGCATTAGAAGACAAAACTGTTGTTTTTGTGACTCATCAAGTCGAATTTCTGCCTTCTGCTGATCTAATCCTGGTTCTTAAAGAAGGGCGCATTATACAAGCAGGAAAATATGATGATCTTTTACAGGCGGGAACTGATTTTAAGACACTAGTCTCAGCTCACAATGAAGCAATTGAAGCTATGGATATTCCCAATTATTCATCAGGCGACTCAGATCACAGCTTGTGTCCAGATGGCTCTGTTGGACTTGTCAAAAAGCATGGTGCACCAAGCAGCAGTGTTGATTCTTTGGCAAAGGAAGTGCAAGAGGGTCCATCAGCCTCAGAGCAGAAAGCAATTAAAGAGAAAAAGAAGGCAAAGCGTGCAAGAAAGAAGCAGCTTGTACAAGATGAGGAAAGGGTAAGAGGAAGAGTCAGCATGAAGGTTTACTTGTCATATATGGCTGCAGCATATAAAGGATCACTGATTCCACTCATAATCATTGCACAAGCAATATTTCAATTCCTTCAAATTGCTAGTAGTTGGTGGATGGCTTGGGCCAATCCCCAAACACAGGGAGATCAGCCTAAAGTGTCTGCTATGGTCCTTCTTGGTGTTTACATGGCCCTTGCATTTGGGAGCTCTTGGTTTATATTCATTAGGGCTGTGTTGGTTGCTACCTTTGGTCTAGAAGCTGCACAGAAATTGTTTCTGAGGATGCTTAGGAGTGTTTTCCGTGCACCAATGTCTTTCTTTGATTCTACTCCTGCTGGACGGATCTTGAATCGTGTATCAATTGATCAAAGTGTGGTGGATCTTGATATTCCTTTTAGACTTGGTGGGTTCGCTTCAACAACAATACAGCTTATAGGCATTGTTGGTGTCATGACAAAAGTTACATGGCAAGTTTTGCTTCTTGTTATTCCTATGGCCATTGCTTGTTTGTGGATGCAGAAATACTACATGGCGTCATCAAGGGAATTAGTCCGAATTGTTAGCATTCAGAAATCTCCAATTATCCATCTTTTCGGTGAGTCAATTGCAGGGGCGGCCACAATAAGAGGATTTGGACAGGAAAAAAGGTTTATGAAGAGGAATCTTTATTTCCTTGATTGTTTTGCTCGCCCATTCTTCTGCAGTATTGCTGCTATTGAGTGGCTCTGCCTACGGATGGAATTACTCTCGACTTTTGTATTTGCTTTCTGCATGCTTTTACTCGTGAGCTTTCCACATGGAACCATTGATCCAAGCATGGCGGGTCTTGCTGTAACATATGGCTTGAATCTAAATGCACGGTTATCACGGTGGATACTTAGCTTCTGCAAGCTTGAAAACAAAATTATTTCCATAGAAAGGATTTATCAGTACAGTCAAATCCCAGGTGAAGCTCCACCAGTTATTGAGGACTCTCGGCCTCCAACTAGATGGCCAGAGAATGGAACGATTGAACTACATGATTTAAAGGTTCGTTACAAGGAAAGCCTTCCTGTAGTGCTTCATGGGGTAACTTGCACTTTTCCTGGTGGAAAGAAGATTGGAATTGTTGGCCGTACTGGAAGTGGCAAATCCACTTTGATCCAGGCCTTATTTCGACTGATTGAACCAGCAGGTGGGAGGATCCTTATAGACAAAATAGATATTTCAACACTTGGTCTTCATGATCTTCGTAGCCGTCTCAGTATCATTCCCCAAGATCCTACCTTATTCGAAGGAACTATTAGGCAGAATCTTGATCCTCTTCAAGAGCATTCCGATCATGATGTTTGGCAGGCACTTGACAAATCTCAGCTTGGAGAGGTAATCCGTAAAACAGAGCACAAGCTTGACTCACCAGTGCTAGAAAATGGAGATAATTGGAGTGTGGGGCAGCGGCAACTTGTTTCTCTGGGCCGTGCATTGCTTAAGCAAGCCAAAATACTGGTGCTTGATGAAGCAACAGCATCGGTTGATACGCAGACAGACAATCTCATCCAGAAAATTATTCGAACAGAGTTTAAGAACTGTACTGTGTGCACTATAGCGCATCGTATACCAACCGTCATTGACAGTGATCTAGTATTGGTCCTGAGTGATGGTCGAGTGGCAGAGTTTGATACTCCTCAACGGCTATTAGAAGATAAATCGTCCATGTTTCTAAAATTGGTAACCGAGTATTCATCAAGGTCAAGTGGCATATCAGATTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0001101 GO:0003674 GO:0003824 GO:0004888 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006873 GO:0006875 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008281 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009987 GO:0010033 GO:0010118 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019725 GO:0022804 GO:0022857 GO:0023052 GO:0030003 GO:0030004 GO:0030007 GO:0031090 GO:0032870 GO:0033993 GO:0038023 GO:0042221 GO:0042592 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0055085 GO:0060089 GO:0065007 GO:0065008 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0097305 GO:0097306 GO:0098588 GO:0098771 GO:0098805 GO:1901527 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

1541

Amino Acids

171.17

Weight (kDa)

8.69

Isoelectric Point (pI)

39.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	338 - 603	7.2e-30	ABC transporter transmembrane region
ABC_tran	PF00005	667 - 801	3.2e-18	ABC transporter
ABC_membrane	PF00664	977 - 1219	3.5e-29	ABC transporter transmembrane region
ABC_tran	PF00005	1311 - 1402	4.2e-15	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007932)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04120 AT1G04120 AT1G04120
fragaria_vesca	FvH4_2g20350 FvH4_2g20350 FvH4_2g20350
malus_domestica	MD05G1187600.v1.1 MD10G1175300.v1.1
prunus_persica	Prupe.8G214600_v2.0.a1 Prupe.8G214600_v2.0.a1 Prupe.8G214600_v2.0.a1
pyrus_communis	pycom05g17240 pycom10g15100
rosa_chinensis	RchiOBHm_Chr6g0286471
rosa_laevigata	RLG00000012569
rosa_multiflora	Rmu_sc0034370.1_g000001
rosa_roxburghii	Rroxscaffold_7G00182310
rosa_rugosa	Rorug06G0179900 Rorug06G0180000
rosa_samantha	Rh6AG292200 Rh6BG295800 Rh6CG296500 Rh6DG288300
rosa_wichuraiana	Rw6G025200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	4034
Acc36I	ACCTGC	1 cut(s)	4034
AccB1I	GGYRCC	1 cut(s)	874
AccB7I	CCANNNNNTGG	3 cut(s)	1176, 3872, 4046
AccI	GTMKAC	2 cut(s)	1236, 4465
AciI	CCGC	9 cut(s)	187, 626, 845, 1555, 2133, 2585, 3485, 3692, 4306
AcoI	YGGCCR	6 cut(s)	795, 2329, 3366, 3486, 3863, 3982
AcsI	RAATTY	8 cut(s)	282, 314, 709, 913, 1566, 1813, 2317, 2501
AcuI	CTGAAG	1 cut(s)	2386
AcyI	GRCGYC	1 cut(s)	3404
AflII	CTTAAG	2 cut(s)	755, 4337
AflIII	ACRYGT	1 cut(s)	2341
AhlI	ACTAGT	2 cut(s)	1283, 2605
AjnI	CCWGG	9 cut(s)	441, 968, 1169, 1340, 1824, 2526, 3814, 3955, 4014
AjuI	GAANNNNNNNTTGG	4 cut(s)	215, 247, 2249, 2281
AleI	CACNNNNGTG	1 cut(s)	1284
AloI	GAACNNNNNNTCC	2 cut(s)	3664, 3696
Alw21I	GWGCWC	8 cut(s)	126, 563, 1694, 2725, 3080, 3178, 4254, 4451
Alw26I	GTCTC	6 cut(s)	835, 1091, 1151, 1754, 2614, 4115
Alw44I	GTGCAC	4 cut(s)	559, 2721, 3174, 4447
ApaLI	GTGCAC	4 cut(s)	559, 2721, 3174, 4447
ApoI	RAATTY	8 cut(s)	282, 314, 709, 913, 1566, 1813, 2317, 2501
Asp700I	GAANNNNTTC	3 cut(s)	1420, 2193, 3918
AspLEI	GCGC	2 cut(s)	2547, 4459
AsuC2I	CCSGG	1 cut(s)	79
AsuHPI	GGTGA	8 cut(s)	232, 1686, 1708, 2129, 2315, 3479, 3830, 4257
AsuII	TTCGAA	3 cut(s)	239, 4143, 4420
AvaII	GGWCC	5 cut(s)	1052, 1975, 2768, 3040, 4498
BaeGI	GKGCMC	5 cut(s)	563, 2362, 2725, 3178, 4451
BalI	TGGCCA	4 cut(s)	797, 2331, 3368, 3865
BamHI	GGATCC	2 cut(s)	1791, 4053
BanI	GGYRCC	1 cut(s)	874
BanII	GRGCYC	3 cut(s)	126, 1694, 3080
BarI	GAAGNNNNNNTAC	2 cut(s)	588, 620
BauI	CACGAG	1 cut(s)	3653
BbsI	GAAGAC	3 cut(s)	1544, 2472, 4082
Bbv12I	GWGCWC	8 cut(s)	126, 563, 1694, 2725, 3080, 3178, 4254, 4451
BceAI	ACGGC	5 cut(s)	200, 3969, 4092, 4311, 4556
BcgI	CGANNNNNNTGC	2 cut(s)	4359, 4393
BciT130I	CCWGG	9 cut(s)	443, 970, 1171, 1342, 1826, 2528, 3816, 3957, 4016
BciVI	GTATCC	2 cut(s)	2160, 3738
BclI	TGATCA	2 cut(s)	1062, 3235
BcnI	CCSGG	1 cut(s)	79
BcoDI	GTCTC	6 cut(s)	835, 1091, 1151, 1754, 2614, 4115
BcuI	ACTAGT	2 cut(s)	1283, 2605
BfaI	CTAG	8 cut(s)	653, 1284, 2606, 2973, 3125, 3858, 4274, 4490
BfmI	CTRYAG	5 cut(s)	1755, 2901, 3571, 3924, 4452
BfrI	CTTAAG	2 cut(s)	755, 4337
BfuAI	ACCTGC	1 cut(s)	4034
BfuI	GTATCC	2 cut(s)	2160, 3738
BlpI	GCTNAGC	2 cut(s)	464, 1264
Bme18I	GGWCC	5 cut(s)	1052, 1975, 2768, 3040, 4498
BmrI	ACTGGG	1 cut(s)	59
BmuI	ACTGGG	1 cut(s)	59
BoxI	GACNNNNGTC	1 cut(s)	2606
BpiI	GAAGAC	3 cut(s)	1544, 2472, 4082
BpmI	CTGGAG	2 cut(s)	140, 1708
Bpu10I	CCTNAGC	1 cut(s)	3158
Bpu1102I	GCTNAGC	2 cut(s)	464, 1264
Bpu14I	TTCGAA	3 cut(s)	239, 4143, 4420
BpuEI	CTTGAG	3 cut(s)	869, 965, 1556
BpuMI	CCSGG	1 cut(s)	79
BsaHI	GRCGYC	1 cut(s)	3404
BsaI	GGTCTC	2 cut(s)	835, 1151
BsaJI	CCNNGG	7 cut(s)	441, 442, 969, 1518, 1922, 2092, 3814
BsaWI	WCCGGW	1 cut(s)	2174
BsaXI	ACNNNNNCTCC	8 cut(s)	390, 420, 1281, 1311, 1622, 1652, 1877, 1907
Bse118I	RCCGGY	1 cut(s)	646
Bse1I	ACTGG	7 cut(s)	65, 876, 2428, 3830, 3994, 4268, 4359
Bse3DI	GCAATG	6 cut(s)	728, 1181, 1236, 2937, 3369, 4331
BseBI	CCWGG	9 cut(s)	443, 970, 1171, 1342, 1826, 2528, 3816, 3957, 4016
BseDI	CCNNGG	7 cut(s)	441, 442, 969, 1518, 1922, 2092, 3814
BseMI	GCAATG	6 cut(s)	728, 1181, 1236, 2937, 3369, 4331
BseNI	ACTGG	7 cut(s)	65, 876, 2428, 3830, 3994, 4268, 4359
BseRI	GAGGAG	4 cut(s)	408, 411, 1628, 4524
BseSI	GKGCMC	5 cut(s)	563, 2362, 2725, 3178, 4451
BseYI	CCCAGC	3 cut(s)	31, 779, 1127
BsgI	GTGCAG	4 cut(s)	1340, 2366, 2427, 3117
BshNI	GGYRCC	1 cut(s)	874
BsiHKAI	GWGCWC	8 cut(s)	126, 563, 1694, 2725, 3080, 3178, 4254, 4451
BsiSI	CCGG	4 cut(s)	79, 647, 1252, 2175
BslFI	GGGAC	3 cut(s)	1144, 1346, 1988
BsmAI	GTCTC	6 cut(s)	835, 1091, 1151, 1754, 2614, 4115
BsmBI	CGTCTC	2 cut(s)	1754, 4115
BsmFI	GGGAC	3 cut(s)	1144, 1346, 1988
BsmI	GAATGC	2 cut(s)	3435, 4183
Bso31I	GGTCTC	2 cut(s)	835, 1151
Bsp119I	TTCGAA	3 cut(s)	239, 4143, 4420
Bsp1286I	GDGCHC	9 cut(s)	126, 563, 1694, 2362, 2725, 3080, 3178, 4254, 4451
Bsp1407I	TGTACA	1 cut(s)	2839
Bsp1720I	GCTNAGC	2 cut(s)	464, 1264
BspACI	CCGC	9 cut(s)	187, 626, 845, 1555, 2133, 2585, 3485, 3692, 4306
BspHI	TCATGA	4 cut(s)	1108, 3321, 4093, 4192
BspMAI	CTGCAG	3 cut(s)	1759, 2905, 3575
BspMI	ACCTGC	1 cut(s)	4034
BspT104I	TTCGAA	3 cut(s)	239, 4143, 4420
BspT107I	GGYRCC	1 cut(s)	874
BspTI	CTTAAG	2 cut(s)	755, 4337
BspTNI	GGTCTC	2 cut(s)	835, 1151
BsrDI	GCAATG	6 cut(s)	728, 1181, 1236, 2937, 3369, 4331
BsrFI	RCCGGY	1 cut(s)	646
BsrGI	TGTACA	1 cut(s)	2839
BsrI	ACTGG	7 cut(s)	65, 876, 2428, 3830, 3994, 4268, 4359
BssAI	RCCGGY	1 cut(s)	646
BssECI	CCNNGG	7 cut(s)	441, 442, 969, 1518, 1922, 2092, 3814
BssNAI	GTATAC	2 cut(s)	1237, 4466
BssNI	GRCGYC	1 cut(s)	3404
BssSI	CACGAG	1 cut(s)	3653
BssT1I	CCWWGG	2 cut(s)	1518, 2092
Bst1107I	GTATAC	2 cut(s)	1237, 4466
Bst2BI	CACGAG	1 cut(s)	3653
Bst2UI	CCWGG	9 cut(s)	443, 970, 1171, 1342, 1826, 2528, 3816, 3957, 4016
Bst6I	CTCTTC	6 cut(s)	133, 825, 1884, 2860, 3521, 4179
BstACI	GRCGYC	1 cut(s)	3404
BstAFI	CTTAAG	2 cut(s)	755, 4337
BstAPI	GCANNNNNTGC	5 cut(s)	109, 2344, 2414, 2819, 3346
BstAUI	TGTACA	1 cut(s)	2839
BstBI	TTCGAA	3 cut(s)	239, 4143, 4420
BstDSI	CCRYGG	1 cut(s)	1922
BstEII	GGTNACC	1 cut(s)	4579
BstENI	CCTNNNNNAGG	1 cut(s)	1110
BstHHI	GCGC	2 cut(s)	2547, 4459
BstMAI	GTCTC	6 cut(s)	835, 1091, 1151, 1754, 2614, 4115
BstNI	CCWGG	9 cut(s)	443, 970, 1171, 1342, 1826, 2528, 3816, 3957, 4016
BstNSI	RCATGY	2 cut(s)	1211, 3646
BstPAI	GACNNNNGTC	1 cut(s)	2606
BstPI	GGTNACC	1 cut(s)	4579
BstSFI	CTRYAG	5 cut(s)	1755, 2901, 3571, 3924, 4452
BstSLI	GKGCMC	5 cut(s)	563, 2362, 2725, 3178, 4451
BstV2I	GAAGAC	3 cut(s)	1544, 2472, 4082
BstX2I	RGATCY	6 cut(s)	1791, 2100, 3213, 3250, 4053, 4129
BstXI	CCANNNNNNTGG	2 cut(s)	3861, 4354
BstYI	RGATCY	6 cut(s)	1791, 2100, 3213, 3250, 4053, 4129
BstZ17I	GTATAC	2 cut(s)	1237, 4466
BsuI	GTATCC	2 cut(s)	2160, 3738
BtgI	CCRYGG	1 cut(s)	1922
BtsI	GCAGTG	2 cut(s)	1752, 2740
BtsIMutI	CAGTG	8 cut(s)	1752, 2252, 2410, 2421, 2740, 2918, 4275, 4489
BveI	ACCTGC	1 cut(s)	4034
CciI	TCATGA	4 cut(s)	1108, 3321, 4093, 4192
CfoI	GCGC	2 cut(s)	2547, 4459
Cfr10I	RCCGGY	1 cut(s)	646
CseI	GACGC	1 cut(s)	3393
CsiI	ACCWGGT	1 cut(s)	1824
DraI	TTTAAA	2 cut(s)	313, 3897
EaeI	YGGCCR	6 cut(s)	795, 2329, 3366, 3486, 3863, 3982
Eam1104I	CTCTTC	6 cut(s)	133, 825, 1884, 2860, 3521, 4179
EarI	CTCTTC	6 cut(s)	133, 825, 1884, 2860, 3521, 4179
EciI	GGCGGA	1 cut(s)	202
Ecl136II	GAGCTC	3 cut(s)	124, 1692, 3078
Eco130I	CCWWGG	2 cut(s)	1518, 2092
Eco147I	AGGCCT	1 cut(s)	4019
Eco24I	GRGCYC	3 cut(s)	126, 1694, 3080
Eco31I	GGTCTC	2 cut(s)	835, 1151
Eco47I	GGWCC	5 cut(s)	1052, 1975, 2768, 3040, 4498
Eco53kI	GAGCTC	3 cut(s)	124, 1692, 3078
Eco57I	CTGAAG	1 cut(s)	2386
Eco91I	GGTNACC	1 cut(s)	4579
EcoICRI	GAGCTC	3 cut(s)	124, 1692, 3078
EcoNI	CCTNNNNNAGG	1 cut(s)	1110
EcoO109I	RGGNCCY	2 cut(s)	1246, 1975
EcoO65I	GGTNACC	1 cut(s)	4579
EcoRI	GAATTC	3 cut(s)	282, 913, 1566
EcoRII	CCWGG	9 cut(s)	441, 968, 1169, 1340, 1824, 2526, 3814, 3955, 4014
EcoT14I	CCWWGG	2 cut(s)	1518, 2092
EcoT22I	ATGCAT	1 cut(s)	1209
EcoT38I	GRGCYC	3 cut(s)	126, 1694, 3080
ErhI	CCWWGG	2 cut(s)	1518, 2092
Esp3I	CGTCTC	2 cut(s)	1754, 4115
FalI	AAGNNNNNCTT	6 cut(s)	1842, 1874, 2870, 2902, 3333, 3365
FaqI	GGGAC	3 cut(s)	1144, 1346, 1988
FauI	CCCGC	2 cut(s)	2578, 3685
FauNDI	CATATG	3 cut(s)	1045, 1358, 3709
FbaI	TGATCA	2 cut(s)	1062, 3235
FblI	GTMKAC	2 cut(s)	1236, 4465
FriOI	GRGCYC	3 cut(s)	126, 1694, 3080
FspBI	CTAG	8 cut(s)	653, 1284, 2606, 2973, 3125, 3858, 4274, 4490
GlaI	GCGC	2 cut(s)	2546, 4458
GsaI	CCCAGC	3 cut(s)	35, 783, 1131
GsuI	CTGGAG	2 cut(s)	140, 1708
HapII	CCGG	4 cut(s)	79, 647, 1252, 2175
HgaI	GACGC	1 cut(s)	3393
HhaI	GCGC	2 cut(s)	2547, 4459
Hin1I	GRCGYC	1 cut(s)	3404
Hin6I	GCGC	2 cut(s)	2545, 4457
HinP1I	GCGC	2 cut(s)	2545, 4457
HincII	GTYRAC	1 cut(s)	1300
HindII	GTYRAC	1 cut(s)	1300
HindIII	AAGCTT	4 cut(s)	1581, 1665, 3761, 4256
HpaI	GTTAAC	1 cut(s)	1300
HpaII	CCGG	4 cut(s)	79, 647, 1252, 2175
HphI	GGTGA	8 cut(s)	232, 1686, 1708, 2129, 2315, 3479, 3830, 4257
HpyCH4IV	ACGT	2 cut(s)	2121, 2341
HpySE526I	ACGT	2 cut(s)	2121, 2341
Hsp92I	GRCGYC	1 cut(s)	3404
HspAI	GCGC	2 cut(s)	2545, 4457
KflI	GGGWCCC	1 cut(s)	1975
Ksp22I	TGATCA	2 cut(s)	1062, 3235
KspAI	GTTAAC	1 cut(s)	1300
LmnI	GCTCC	5 cut(s)	95, 121, 1689, 3075, 3829
MabI	ACCWGGT	1 cut(s)	1824
MaeI	CTAG	8 cut(s)	653, 1284, 2606, 2973, 3125, 3858, 4274, 4490
MaeII	ACGT	2 cut(s)	2121, 2341
MfeI	CAATTG	5 cut(s)	132, 828, 2628, 3231, 3474
MflI	RGATCY	6 cut(s)	1791, 2100, 3213, 3250, 4053, 4129
MhlI	GDGCHC	9 cut(s)	126, 563, 1694, 2362, 2725, 3080, 3178, 4254, 4451
MlsI	TGGCCA	4 cut(s)	797, 2331, 3368, 3865
MluNI	TGGCCA	4 cut(s)	797, 2331, 3368, 3865
MlyI	GAGTC	7 cut(s)	306, 2482, 2660, 2877, 3479, 3836, 4256
MmeI	TCCRAC	3 cut(s)	1393, 2680, 3878
Mox20I	TGGCCA	4 cut(s)	797, 2331, 3368, 3865
Mph1103I	ATGCAT	1 cut(s)	1209
MroXI	GAANNNNTTC	3 cut(s)	1420, 2193, 3918
MscI	TGGCCA	4 cut(s)	797, 2331, 3368, 3865
MslI	CAYNNNNRTG	5 cut(s)	618, 1229, 1284, 1361, 1679
Msp20I	TGGCCA	4 cut(s)	797, 2331, 3368, 3865
MspA1I	CMGCKG	3 cut(s)	437, 1712, 4306
MspCI	CTTAAG	2 cut(s)	755, 4337
MspI	CCGG	4 cut(s)	79, 647, 1252, 2175
MunI	CAATTG	5 cut(s)	132, 828, 2628, 3231, 3474
Mva1269I	GAATGC	2 cut(s)	3435, 4183
MvaI	CCWGG	9 cut(s)	443, 970, 1171, 1342, 1826, 2528, 3816, 3957, 4016
NciI	CCSGG	1 cut(s)	79
NdeI	CATATG	3 cut(s)	1045, 1358, 3709
NmeAIII	GCCGAG	2 cut(s)	526, 3826
NmuCI	GTSAC	6 cut(s)	640, 685, 1277, 1714, 2117, 2485
NsiI	ATGCAT	1 cut(s)	1209
NspI	RCATGY	2 cut(s)	1211, 3646
NspV	TTCGAA	3 cut(s)	239, 4143, 4420
OliI	CACNNNNGTG	1 cut(s)	1284
PaeI	GCATGC	1 cut(s)	3646
PagI	TCATGA	4 cut(s)	1108, 3321, 4093, 4192
PaqCI	CACCTGC	1 cut(s)	4034
PasI	CCCWGGG	1 cut(s)	442
PceI	AGGCCT	1 cut(s)	4019
PctI	GAATGC	2 cut(s)	3435, 4183
PdmI	GAANNNNTTC	3 cut(s)	1420, 2193, 3918
PfeI	GAWTC	7 cut(s)	2741, 2923, 3194, 3220, 3532, 3718, 4162
PflMI	CCANNNNNTGG	3 cut(s)	1176, 3872, 4046
PfoI	TCCNGGA	1 cut(s)	77
PleI	GAGTC	7 cut(s)	305, 2482, 2660, 2876, 3478, 3836, 4256
PpsI	GAGTC	7 cut(s)	305, 2482, 2660, 2876, 3478, 3836, 4256
PpuMI	RGGWCCY	1 cut(s)	1975
PshAI	GACNNNNGTC	1 cut(s)	2606
Psp124BI	GAGCTC	3 cut(s)	126, 1694, 3080
Psp5II	RGGWCCY	1 cut(s)	1975
Psp6I	CCWGG	9 cut(s)	441, 968, 1169, 1340, 1824, 2526, 3814, 3955, 4014
PspEI	GGTNACC	1 cut(s)	4579
PspFI	CCCAGC	3 cut(s)	31, 779, 1127
PspGI	CCWGG	9 cut(s)	441, 968, 1169, 1340, 1824, 2526, 3814, 3955, 4014
PspPPI	RGGWCCY	1 cut(s)	1975
PstI	CTGCAG	3 cut(s)	1759, 2905, 3575
PsuI	RGATCY	6 cut(s)	1791, 2100, 3213, 3250, 4053, 4129
PvuII	CAGCTG	2 cut(s)	437, 1712
RseI	CAYNNNNRTG	5 cut(s)	618, 1229, 1284, 1361, 1679
SacI	GAGCTC	3 cut(s)	126, 1694, 3080
SchI	GAGTC	7 cut(s)	306, 2482, 2660, 2877, 3479, 3836, 4256
SduI	GDGCHC	9 cut(s)	126, 563, 1694, 2362, 2725, 3080, 3178, 4254, 4451
SexAI	ACCWGGT	1 cut(s)	1824
SfcI	CTRYAG	5 cut(s)	1755, 2901, 3571, 3924, 4452
SfuI	TTCGAA	3 cut(s)	239, 4143, 4420
SinI	GGWCC	5 cut(s)	1052, 1975, 2768, 3040, 4498
SmiMI	CAYNNNNRTG	5 cut(s)	618, 1229, 1284, 1361, 1679
SmlI	CTYRAG	5 cut(s)	755, 848, 980, 1571, 4337
SmoI	CTYRAG	5 cut(s)	755, 848, 980, 1571, 4337
SpeI	ACTAGT	2 cut(s)	1283, 2605
SphI	GCATGC	1 cut(s)	3646
SseBI	AGGCCT	1 cut(s)	4019
SsiI	CCGC	9 cut(s)	187, 626, 845, 1555, 2133, 2585, 3485, 3692, 4306
SspI	AATATT	2 cut(s)	2194, 2952
SspMI	CTAG	8 cut(s)	653, 1284, 2606, 2973, 3125, 3858, 4274, 4490
SstI	GAGCTC	3 cut(s)	126, 1694, 3080
StuI	AGGCCT	1 cut(s)	4019
StyI	CCWWGG	2 cut(s)	1518, 2092
TaiI	ACGT	2 cut(s)	2124, 2344
TaqI	TCGA	9 cut(s)	239, 602, 886, 2499, 3620, 4027, 4143, 4420, 4513
TatI	WGTACW	5 cut(s)	2008, 2226, 2839, 3801, 4439
TauI	GCSGC	3 cut(s)	629, 3488, 4309
TfiI	GAWTC	7 cut(s)	2741, 2923, 3194, 3220, 3532, 3718, 4162
TscAI	CASTG	8 cut(s)	1759, 2259, 2410, 2428, 2740, 2925, 4275, 4489
TseFI	GTSAC	6 cut(s)	640, 685, 1277, 1714, 2117, 2485
Tsp45I	GTSAC	6 cut(s)	640, 685, 1277, 1714, 2117, 2485
TspGWI	ACGGA	5 cut(s)	1044, 3161, 3226, 3619, 4229
TspRI	CASTG	8 cut(s)	1759, 2259, 2410, 2428, 2740, 2925, 4275, 4489
Van91I	CCANNNNNTGG	3 cut(s)	1176, 3872, 4046
Vha464I	CTTAAG	2 cut(s)	755, 4337
VneI	GTGCAC	4 cut(s)	559, 2721, 3174, 4447
VpaK11BI	GGWCC	5 cut(s)	1052, 1975, 2768, 3040, 4498
XagI	CCTNNNNNAGG	1 cut(s)	1110
XapI	RAATTY	8 cut(s)	282, 314, 709, 913, 1566, 1813, 2317, 2501
XbaI	TCTAGA	1 cut(s)	3124
XceI	RCATGY	2 cut(s)	1211, 3646
XmiI	GTMKAC	2 cut(s)	1236, 4465
XmnI	GAANNNNTTC	3 cut(s)	1420, 2193, 3918
XspI	CTAG	8 cut(s)	653, 1284, 2606, 2973, 3125, 3858, 4274, 4490
Zsp2I	ATGCAT	1 cut(s)	1209

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.