Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0007932

Physical Location & Seq

Genomic Coordinates Reverse (-)

19924148 .. 19931798

Gene Structure 7651 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000012569

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4725 bp

ATGATGGCTTGTCTCCACCGCTGGTTCACCATTAAAGCCCCTATTTTGAGGTTTTGTATTGCATCTCAAAACCCAGATGTCCATTTGCTCTGTTCAACAATGGGTCTCACTCTCTTGCTTCACAAAATCTCAGCTTCTTCTTCACCTTCAAACCAAGCTCAGCTATACCAGAAGACCCCTTTGGGAGCTGTGCAAGGTCTGCCCTTTCTGGAGCTGTCTTCAATTGTCATCAATTTGGCGCTAGTTCTTGCGTTTCTCTTCATCGTTTCGGCCCGGCGGATGGTTGTCTGTCTGGGCCGGATTAGGGTGCTGAAAGACGATTTGGGTTCGAATGGGAACTCAATTCAGCATGATAGTGCTGTTGATATAGGAATTCAGGAGGTTAGAGTGGGCACAGACTTTAAATTTTCAGTGTTTTGCTGCTTCTATGTGTTGTTTGTGCAAGTTGTGGTGTTGGGTTTTGATGGGGTTGGTTTGGTTAGAGGAGGAGGGGGTGGTAGTGGGAGGGTGGTGGTTTGGTCTGTGCTTTGCTTACCAGCTGCACAGGGCTTAGCTTGGTTTGTGATGAGCTTCTCGGCTTTGCATTGTAAGTTCAAGGCAGCCGAGAAGTTCCCATTGCTGTTGAGGGGTTGGTGGGCCGTGTCCTTTGTGCTTTGCTTGTGCACTTTGTATGTTGATGGAAGAGGTTTTGTACAAGAAGGCTCGATACACCTTCATTCTCATGTTGTGGCTAATTTCGCAGTCACACCGGCCCTAGCGTTTCTCTGTTTCGTTGCAATTAGGGGTGTGACTGGTGTGATTGTTTGTAGAAACTCTGAGCTTGAAGAGCCATTGCTCGAAGAAGAAGCAGGGTGTCTTAAGGTTACCCCTTATAGTGATGCTGGGATTTTCAGCTTGGCAACACTATCTTGGATAAACCCTCTTCTTTCAATAGGGGCAAAGAGACCACTTGAGATCAAGGATATTCCTCTTCTTGCACCAAAAGATCGAGCCAAGACCAATTATAAGGTCTTGAATTCAAATTGGGAGAAATTGAAGGCTGAAGATCCTTCAAAGCAGCCTTCTTTAGCCTGGGCAATTCTCAAGTCATTTTGGAAGGAGGCAGCTTGTAATGCCATTTTCGCTGGCTTGAACACTCTTGTTTCATATGTGGGTCCGTATATGATCAGCTATTTCGTTGATTACTTGGGGGGAATAGAGACTTTCCCCCATGAAGGGTATATCCTTGCTGGGACCTTCTTTGCAGCGAAGCTAGTTGAGACCTTAACAACCCGGCAGTGGTATCTTGGGGTGGACATTTTGGGTATGCATGTAAGATCAGCTCTAACAGCAATGGTATACCAAAAGGGACTCAGGCTTTCCAGCTCAGCCAAGCAAAGTCACACTAGTGGAGAGATTGTTAACTACATGGCTGTTGATGTGCAGAGGGTAGGGGACTATTCCTGGTATCTCCATGACATATGGATGCTTCCTCTGCAAATTGTTCTTGCCCTTGCAATTTTATACAAGAATGTTGGAATTGCTTCTGTTGCTACATTGATTGCCACCATTATCTCCATTGTTCTTACTGTTCCTTTGGCAAAGATACAAGAAGATTATCAAGACAAGTTGATGACAGCCAAGGATGAAAGAATGAGGAAGACTTCTGAGTGCCTGCGGAACATGAGAATTCTTAAGTTGCAAGCTTGGGAGGACAGATACCGACTGATGTTAGAGGAGATGCGTAGTGTGGAGTTTAAGTATCTACGCAAAGCCCTCTACTCGCAAGCTTTTATCACATTCATGTTCTGGAGCTCTCCTATATTTGTTTCAGCTGTCACTTTCGGTACTTCTGTATTTTTGGGTACTCGTCTCACTGCAGGTGGTGTTCTTTCTGCTCTCGCGACTTTCAGGATCCTCCAAGAACCACTCAGGAATTTCCCTGACCTGGTATCAATGATGGCTCAGACAAAAGTTTCCCTTGATCGTATTTCTGGATTCTTGCAGGAGGAAGAGTTACAGGCAGATGCAACAATTGTCCTGCCACGGGGCATCACAACCACGTCAATAGAAATTAAAGATGGCGTGTTTAGCTGGGACCCTTCCTCTGCAAGACCAACATTATCGGGAATACAAATGAAAGTGGAAAGAGGGATGCGTGTTGCTGTATGTGGAATGGTTGGTTCTGGAAAATCAAGTTTTCTCTCTTGCATCCTCGGGGAGATCCCGAAAATCTCCGGTGAAGTAAAGTTATGTGGTGCTGCTGCTTATGTTTCTCAGTCAGCATGGATACAGTCTGGTAATATAGAAGAAAATATTCTTTTTGGCACCCCAATGGAGAAACCAAAGTACAAGAAGGTTCTCCATGCTTGTTCACTGAAAAAGGATTTGGAACTTTTCTCACATGGAGATCAGACCATAATTGGTGATAGGGGTATAAATTTGAGTGGTGGCCAGAAGCAACGTGTGCAGCTTGCACGGGCACTCTATCAGGACGCTGACATTTATTTACTTGACGACCCCTTCAGTGCAGTTGATGCACACACTGGATCAGAGTTGTTTAAGGAATACATATTGACAGCGTTAGAAGACAAAACTGTTGTTTTCGTGACCCATCAAGTCGAATTTCTGCCTTCTGCTGATTTAATCCTGGTTCTTAAAGAAGGGCGCATCATACAAGCAGGCAAATATGATGATCTTTTACAGGCAGGAACTGATTTTAAGACACTAGTCTCAGCTCACCATGATGCAATTGAAGCTATGGATATTCCCAATTATTCGTCAGGCGACTCTGATCACAACTTGTGTCCAGATGGCTCTGTTGGACTTGGCAAAAATCCTGATTTACCAAGCAGCAGTGTTGATTGTTTGGCAAAGGAAGTGCAAGAAGGTCCATCAGCTTTAGAGCAGAAAGCAATTAAAGAGAAAAAGAAGGCAAAGCGGGCAAGAAAGAAGCAGCTTGTACAAGAAGAGGAAAGGGTAAGAGGAAGAGTCAGCATGAAGGTTTACTTGTCATATATGGCTGCAGCATATAAAGGATCGCTGATTCCACTCATAATTATTGCACAAGCAATATTTCAATTCCTTCAAATTGCTAGTAGTTGGTGGATGGCTTGGGCGAATCCCCAAACACAGGGAGATCAGCCTAAAGTGAGTGCTGTGGTCCTTCTTGGTGTTTACATGGCCCTTGCATTTGGGAGCTCTTGGTTTATATTTATTAGGGCTGTGTTGGTAGCTACCTTTGGTCTAGAAGCTGCACAGAAATTGTTTCTGAAGATGCTTAGGAGTGTTTTCCGCGCACCAATGTCTTTCTTTGATTCTACTCCTGCTGGACGGATCTTGAATCGTGTATCAATTGATCAAAGTGTGGTGGATCTTGATATTCCTTTTAGACTTGGTGGGTTCGCTTCAACGACAATACAGCTTATAGGCATTGTTGGGGTGATGACAAAAGTTACCTGGCAAGTTTTGCTTCTTGTTGTTCCTATGGCAATTGCTTGTTTGTGGATGCAGAAATACTACATGGCTTCATCAAGGGAATTAGTCCGAATTGTTAGCATTCAGAAATCTCCAATTATCCATCTTTTCGGTGAGTCAATTGCAGGGGCGGCCACAATAAGAGGATTTGGACAGGAAAAAAGGTTCATGAAAAGGAATCTTTATTTCCTTGATTGTTTTGCTCGCCCATTCTTCTGCAGCATTGCTGCTATTGAATGGCTCTGCCTACGGATGGAATTACTCTCGACTTTTGTTTTTGCTTTCTGCATGCTATTACTTGTGAGCTTTCCACATGGAACCATTGATCCAAGCATGGCGGGTCTTGCTGTAACATATGGCTTGAATTTAAATGCACGGTTATCACGGTGGATACTTAGCTTTTGCAAGCTTGAGAACAAAATTATTTCCATAGAAAGAATTTATCAGTACAGTCAAATCCCAAGTGAAGCTCCCCCAGTTATTGAGGACTCTCGTCCTCCAACTAGATGGCCAGAGAATGGAACAATCGAACTACATGATTTAAAGGTTCGTTACAAGGAGAATCTTCCTGTAGTGCTTCATGGGGTAACTTGCACTTTTCCTGGCGGAAAGAAGATTGGAATTGTTGGGCGTACTGGAAGTGGCAAATCCACTTTGATCCAGGCCTTATTTCGACTGATTGAACCAGCAGGTGGGAGGATCCTTATAGACAAAATAGATATTTCAACGCTCGGTCTTCATGATCTTCGTAGCCGTCTCAGTATCATACCCCAGGATCCTACCTTATTTGAAGGAACTATTAGGGGGAATCTTGATCCCCTTCAAGAGCATTCGGATCATGAAGTTTGGCAGGCACTTGACAAATCTCAGCTTGGAGATGTAATCCGTAAAACAGAGCACAAGCTTGATTCACCAGTGCTAGAAAATGGGGATAATTGGAGCGTGGGGCAGCGACAACTTGTTTCTCTGGGTCGGGCATTGCTTAAGCAGGCCAAAATACTGGTGCTTGATGAAGCAACAGCATCAGTTGATACGCAGACAGACAATCTGATCCAGAAAATTATTCGAACAGAGTTTAAGAACTGTACTGTGTGCACTATAGCGCATCGTATACCAACCGTCATTGACAGTGATCTAGTATTGGTTCTGAGTGATGGTCGAGTGGCAGAGTTTGATACTCCTCAACGGCTATTAGAAGATAAATCGTCCATGTTTCTAAAATTGGTAACTGAGTATTCATCAAGGTCAACTGGTGTACCGGATTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0001101 GO:0003674 GO:0003824 GO:0004888 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006873 GO:0006875 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008281 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009987 GO:0010033 GO:0010118 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019725 GO:0022804 GO:0022857 GO:0023052 GO:0030003 GO:0030004 GO:0030007 GO:0031090 GO:0032870 GO:0033993 GO:0038023 GO:0042221 GO:0042592 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0055085 GO:0060089 GO:0065007 GO:0065008 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0097305 GO:0097306 GO:0098588 GO:0098771 GO:0098805 GO:1901527 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

1575

Amino Acids

174.45

Weight (kDa)

8.59

Isoelectric Point (pI)

39.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	372 - 637	5e-29	ABC transporter transmembrane region
ABC_tran	PF00005	701 - 835	2e-18	ABC transporter
ABC_membrane	PF00664	1011 - 1253	1e-29	ABC transporter transmembrane region
ABC_tran	PF00005	1345 - 1493	1.4e-27	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0007932)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04120 AT1G04120 AT1G04120
fragaria_vesca	FvH4_2g20350 FvH4_2g20350 FvH4_2g20350
malus_domestica	MD05G1187600.v1.1 MD10G1175300.v1.1
prunus_persica	Prupe.8G214600_v2.0.a1 Prupe.8G214600_v2.0.a1 Prupe.8G214600_v2.0.a1
pyrus_communis	pycom05g17240 pycom10g15100
rosa_chinensis	RchiOBHm_Chr6g0286471
rosa_laevigata	RLG00000012569
rosa_multiflora	Rmu_sc0034370.1_g000001
rosa_roxburghii	Rroxscaffold_7G00182310
rosa_rugosa	Rorug06G0179900 Rorug06G0180000
rosa_samantha	Rh6AG292200 Rh6BG295800 Rh6CG296500 Rh6DG288300
rosa_wichuraiana	Rw6G025200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1005
AarI	CACCTGC	2 cut(s)	1850, 4136
Acc36I	ACCTGC	2 cut(s)	1850, 4136
AccB1I	GGYRCC	1 cut(s)	2306
AccB7I	CCANNNNNTGG	2 cut(s)	3974, 4148
AccI	GTMKAC	2 cut(s)	1338, 4567
AccII	CGCG	2 cut(s)	1883, 3276
AciI	CCGC	8 cut(s)	19, 277, 1657, 2920, 3274, 3587, 3794, 4062
AcoI	YGGCCR	3 cut(s)	2431, 3588, 3965
AcsI	RAATTY	9 cut(s)	372, 404, 1015, 1668, 1915, 2419, 2603, 3820, 3894
AcuI	CTGAAG	3 cut(s)	1062, 2488, 3272
AfaI	GTAC	9 cut(s)	693, 1828, 1846, 2330, 2943, 3905, 4090, 4543, 4713
AflII	CTTAAG	3 cut(s)	857, 1673, 4439
AflIII	ACRYGT	1 cut(s)	2443
AhlI	ACTAGT	2 cut(s)	1385, 2707
AjiI	CACGTC	1 cut(s)	2043
AjnI	CCWGG	8 cut(s)	1070, 1442, 1926, 2628, 3437, 4057, 4116, 4227
AjuI	GAANNNNNNNTTGG	6 cut(s)	164, 196, 305, 337, 2351, 2383
AleI	CACNNNNGTG	1 cut(s)	1386
AloI	GAACNNNNNNTCC	4 cut(s)	3605, 3637, 3766, 3798
Alw21I	GWGCWC	5 cut(s)	665, 1796, 3182, 4356, 4553
Alw26I	GTCTC	8 cut(s)	17, 110, 937, 1193, 1253, 1856, 2716, 4217
Alw44I	GTGCAC	2 cut(s)	661, 4549
AlwNI	CAGNNNCTG	1 cut(s)	2693
Ama87I	CYCGRG	1 cut(s)	2195
ApaLI	GTGCAC	2 cut(s)	661, 4549
ApoI	RAATTY	9 cut(s)	372, 404, 1015, 1668, 1915, 2419, 2603, 3820, 3894
Asp700I	GAANNNNTTC	2 cut(s)	1522, 2295
AspLEI	GCGC	4 cut(s)	241, 2649, 3278, 4561
AsuC2I	CCSGG	2 cut(s)	274, 1273
AsuHPI	GGTGA	8 cut(s)	19, 135, 2231, 2417, 2711, 3433, 3581, 4359
AsuII	TTCGAA	2 cut(s)	329, 4522
AvaI	CYCGRG	1 cut(s)	2195
AvaII	GGWCC	5 cut(s)	1154, 1233, 2077, 2870, 3142
BaeGI	GKGCMC	4 cut(s)	395, 665, 2464, 4553
BaeI	ACNNNNGTAYC	3 cut(s)	1818, 1851, 4695
BalI	TGGCCA	2 cut(s)	2433, 3967
BamHI	GGATCC	3 cut(s)	1893, 4155, 4231
BanI	GGYRCC	1 cut(s)	2306
BanII	GRGCYC	2 cut(s)	1796, 3182
BarI	GAAGNNNNNNTAC	2 cut(s)	690, 722
BbsI	GAAGAC	5 cut(s)	179, 210, 1646, 2574, 4184
Bbv12I	GWGCWC	5 cut(s)	665, 1796, 3182, 4356, 4553
BceAI	ACGGC	3 cut(s)	623, 4194, 4658
BciT130I	CCWGG	8 cut(s)	1072, 1444, 1928, 2630, 3439, 4059, 4118, 4229
BciVI	GTATCC	2 cut(s)	2262, 3840
BclI	TGATCA	3 cut(s)	1164, 2773, 3337
BcnI	CCSGG	2 cut(s)	274, 1273
BcoDI	GTCTC	8 cut(s)	17, 110, 937, 1193, 1253, 1856, 2716, 4217
BcuI	ACTAGT	2 cut(s)	1385, 2707
BfmI	CTRYAG	5 cut(s)	1857, 3003, 3673, 4026, 4554
BfoI	RGCGCY	1 cut(s)	242
BfrI	CTTAAG	3 cut(s)	857, 1673, 4439
BfuAI	ACCTGC	2 cut(s)	1850, 4136
BfuI	GTATCC	2 cut(s)	2262, 3840
BlpI	GCTNAGC	3 cut(s)	159, 550, 1366
Bme18I	GGWCC	5 cut(s)	1154, 1233, 2077, 2870, 3142
BmeT110I	CYCGRG	1 cut(s)	2195
BmgBI	CACGTC	1 cut(s)	2043
BmiI	GGNNCC	9 cut(s)	1155, 1234, 1895, 2078, 2079, 2308, 3775, 4157, 4233
BmrI	ACTGGG	1 cut(s)	3926
BmuI	ACTGGG	1 cut(s)	3926
BoxI	GACNNNNGTC	2 cut(s)	2708, 3948
BpiI	GAAGAC	5 cut(s)	179, 210, 1646, 2574, 4184
BpmI	CTGGAG	2 cut(s)	230, 1810
Bpu10I	CCTNAGC	1 cut(s)	3260
Bpu1102I	GCTNAGC	3 cut(s)	159, 550, 1366
Bpu14I	TTCGAA	2 cut(s)	329, 4522
BpuEI	CTTGAG	3 cut(s)	971, 1067, 3887
BpuMI	CCSGG	2 cut(s)	274, 1273
BsaI	GGTCTC	3 cut(s)	110, 937, 1253
BsaJI	CCNNGG	5 cut(s)	1071, 1620, 2024, 2194, 4227
BsaWI	WCCGGW	2 cut(s)	2216, 4714
BsaXI	ACNNNNNCTCC	6 cut(s)	1383, 1413, 1724, 1754, 1979, 2009
Bse118I	RCCGGY	1 cut(s)	748
Bse1I	ACTGG	7 cut(s)	796, 2530, 3932, 4096, 4370, 4461, 4711
Bse3DI	GCAATG	5 cut(s)	614, 830, 1338, 3678, 4433
BseBI	CCWGG	8 cut(s)	1072, 1444, 1928, 2630, 3439, 4059, 4118, 4229
BseDI	CCNNGG	5 cut(s)	1071, 1620, 2024, 2194, 4227
BseGI	GGATG	8 cut(s)	285, 1470, 1630, 2139, 2190, 3093, 3492, 3714
BseMI	GCAATG	5 cut(s)	614, 830, 1338, 3678, 4433
BseNI	ACTGG	7 cut(s)	796, 2530, 3932, 4096, 4370, 4461, 4711
BseRI	GAGGAG	4 cut(s)	498, 501, 1730, 4626
BseSI	GKGCMC	4 cut(s)	395, 665, 2464, 4553
BseYI	CCCAGC	3 cut(s)	881, 1229, 2073
BsgI	GTGCAG	5 cut(s)	525, 1442, 2468, 2529, 3219
Bsh1236I	CGCG	2 cut(s)	1883, 3276
BshNI	GGYRCC	1 cut(s)	2306
BsiHKAI	GWGCWC	5 cut(s)	665, 1796, 3182, 4356, 4553
BsiHKCI	CYCGRG	1 cut(s)	2195
BsiSI	CCGG	6 cut(s)	274, 298, 749, 1273, 2217, 4715
BslFI	GGGAC	4 cut(s)	1246, 1362, 1448, 2090
BsmAI	GTCTC	8 cut(s)	17, 110, 937, 1193, 1253, 1856, 2716, 4217
BsmBI	CGTCTC	2 cut(s)	1856, 4217
BsmFI	GGGAC	4 cut(s)	1246, 1362, 1448, 2090
BsmI	GAATGC	2 cut(s)	3537, 4285
Bso31I	GGTCTC	3 cut(s)	110, 937, 1253
BsoBI	CYCGRG	1 cut(s)	2195
Bsp119I	TTCGAA	2 cut(s)	329, 4522
Bsp1286I	GDGCHC	7 cut(s)	395, 665, 1796, 2464, 3182, 4356, 4553
Bsp1407I	TGTACA	2 cut(s)	691, 2941
Bsp1720I	GCTNAGC	3 cut(s)	159, 550, 1366
Bsp68I	TCGCGA	1 cut(s)	1883
BspACI	CCGC	8 cut(s)	19, 277, 1657, 2920, 3274, 3587, 3794, 4062
BspFNI	CGCG	2 cut(s)	1883, 3276
BspHI	TCATGA	3 cut(s)	3624, 4195, 4294
BspLI	GGNNCC	9 cut(s)	1155, 1234, 1895, 2078, 2079, 2308, 3775, 4157, 4233
BspMAI	CTGCAG	3 cut(s)	1861, 3007, 3677
BspMI	ACCTGC	2 cut(s)	1850, 4136
BspQI	GCTCTTC	1 cut(s)	819
BspT104I	TTCGAA	2 cut(s)	329, 4522
BspT107I	GGYRCC	1 cut(s)	2306
BspTI	CTTAAG	3 cut(s)	857, 1673, 4439
BspTNI	GGTCTC	3 cut(s)	110, 937, 1253
BsrDI	GCAATG	5 cut(s)	614, 830, 1338, 3678, 4433
BsrFI	RCCGGY	1 cut(s)	748
BsrGI	TGTACA	2 cut(s)	691, 2941
BsrI	ACTGG	7 cut(s)	796, 2530, 3932, 4096, 4370, 4461, 4711
BssAI	RCCGGY	1 cut(s)	748
BssECI	CCNNGG	5 cut(s)	1071, 1620, 2024, 2194, 4227
BssNAI	GTATAC	2 cut(s)	1339, 4568
BssT1I	CCWWGG	1 cut(s)	1620
Bst1107I	GTATAC	2 cut(s)	1339, 4568
Bst2UI	CCWGG	8 cut(s)	1072, 1444, 1928, 2630, 3439, 4059, 4118, 4229
Bst6I	CTCTTC	8 cut(s)	263, 676, 819, 927, 975, 1986, 2943, 2962
BstAFI	CTTAAG	3 cut(s)	857, 1673, 4439
BstAPI	GCANNNNNTGC	4 cut(s)	199, 2446, 2516, 3448
BstAUI	TGTACA	2 cut(s)	691, 2941
BstBI	TTCGAA	2 cut(s)	329, 4522
BstDSI	CCRYGG	1 cut(s)	2024
BstEII	GGTNACC	1 cut(s)	862
BstF5I	GGATG	8 cut(s)	285, 1470, 1630, 2139, 2190, 3093, 3492, 3714
BstFNI	CGCG	2 cut(s)	1883, 3276
BstH2I	RGCGCY	1 cut(s)	242
BstHHI	GCGC	4 cut(s)	241, 2649, 3278, 4561
BstMAI	GTCTC	8 cut(s)	17, 110, 937, 1193, 1253, 1856, 2716, 4217
BstNI	CCWGG	8 cut(s)	1072, 1444, 1928, 2630, 3439, 4059, 4118, 4229
BstNSI	RCATGY	2 cut(s)	1313, 3748
BstPAI	GACNNNNGTC	2 cut(s)	2708, 3948
BstPI	GGTNACC	1 cut(s)	862
BstSFI	CTRYAG	5 cut(s)	1857, 3003, 3673, 4026, 4554
BstSLI	GKGCMC	4 cut(s)	395, 665, 2464, 4553
BstUI	CGCG	2 cut(s)	1883, 3276
BstV2I	GAAGAC	5 cut(s)	179, 210, 1646, 2574, 4184
BstX2I	RGATCY	7 cut(s)	1045, 1893, 2202, 3315, 3352, 4155, 4231
BstXI	CCANNNNNNTGG	2 cut(s)	3963, 4456
BstYI	RGATCY	7 cut(s)	1045, 1893, 2202, 3315, 3352, 4155, 4231
BstZ17I	GTATAC	2 cut(s)	1339, 4568
BsuI	GTATCC	2 cut(s)	2262, 3840
BtgI	CCRYGG	1 cut(s)	2024
BtrI	CACGTC	1 cut(s)	2043
BtsCI	GGATG	8 cut(s)	285, 1470, 1630, 2139, 2190, 3093, 3492, 3714
BtsI	GCAGTG	3 cut(s)	1283, 1854, 2842
BtsIMutI	CAGTG	9 cut(s)	417, 1283, 1854, 2354, 2512, 2523, 2842, 4377, 4591
BtuMI	TCGCGA	1 cut(s)	1883
BveI	ACCTGC	2 cut(s)	1850, 4136
CaiI	CAGNNNCTG	1 cut(s)	2693
CciI	TCATGA	3 cut(s)	3624, 4195, 4294
CfoI	GCGC	4 cut(s)	241, 2649, 3278, 4561
Cfr10I	RCCGGY	1 cut(s)	748
CseI	GACGC	1 cut(s)	2483
CsiI	ACCWGGT	1 cut(s)	1926
Csp6I	GTAC	9 cut(s)	692, 1827, 1845, 2329, 2942, 3904, 4089, 4542, 4712
CviQI	GTAC	9 cut(s)	692, 1827, 1845, 2329, 2942, 3904, 4089, 4542, 4712
DraI	TTTAAA	3 cut(s)	403, 3825, 3999
EaeI	YGGCCR	3 cut(s)	2431, 3588, 3965
Eam1104I	CTCTTC	8 cut(s)	263, 676, 819, 927, 975, 1986, 2943, 2962
EarI	CTCTTC	8 cut(s)	263, 676, 819, 927, 975, 1986, 2943, 2962
EciI	GGCGGA	2 cut(s)	292, 4077
Ecl136II	GAGCTC	2 cut(s)	1794, 3180
Eco130I	CCWWGG	1 cut(s)	1620
Eco147I	AGGCCT	1 cut(s)	4121
Eco24I	GRGCYC	2 cut(s)	1796, 3182
Eco31I	GGTCTC	3 cut(s)	110, 937, 1253
Eco47I	GGWCC	5 cut(s)	1154, 1233, 2077, 2870, 3142
Eco53kI	GAGCTC	2 cut(s)	1794, 3180
Eco57I	CTGAAG	3 cut(s)	1062, 2488, 3272
Eco88I	CYCGRG	1 cut(s)	2195
Eco91I	GGTNACC	1 cut(s)	862
EcoICRI	GAGCTC	2 cut(s)	1794, 3180
EcoO109I	RGGNCCY	2 cut(s)	1233, 2077
EcoO65I	GGTNACC	1 cut(s)	862
EcoRI	GAATTC	3 cut(s)	372, 1015, 1668
EcoRII	CCWGG	8 cut(s)	1070, 1442, 1926, 2628, 3437, 4057, 4116, 4227
EcoT14I	CCWWGG	1 cut(s)	1620
EcoT22I	ATGCAT	1 cut(s)	1311
EcoT38I	GRGCYC	2 cut(s)	1796, 3182
ErhI	CCWWGG	1 cut(s)	1620
Esp3I	CGTCTC	2 cut(s)	1856, 4217
FalI	AAGNNNNNCTT	6 cut(s)	1944, 1976, 2972, 3004, 3435, 3467
FaqI	GGGAC	4 cut(s)	1246, 1362, 1448, 2090
FauI	CCCGC	2 cut(s)	2913, 3787
FauNDI	CATATG	3 cut(s)	1147, 1460, 3811
FbaI	TGATCA	3 cut(s)	1164, 2773, 3337
FblI	GTMKAC	2 cut(s)	1338, 4567
FokI	GGATG	8 cut(s)	292, 1477, 1637, 2146, 2177, 3100, 3499, 3721
FriOI	GRGCYC	2 cut(s)	1796, 3182
GlaI	GCGC	4 cut(s)	240, 2648, 3277, 4560
GsaI	CCCAGC	3 cut(s)	885, 1233, 2077
GsuI	CTGGAG	2 cut(s)	230, 1810
HaeII	RGCGCY	1 cut(s)	242
HapII	CCGG	6 cut(s)	274, 298, 749, 1273, 2217, 4715
HgaI	GACGC	1 cut(s)	2483
HhaI	GCGC	4 cut(s)	241, 2649, 3278, 4561
Hin6I	GCGC	4 cut(s)	239, 2647, 3276, 4559
HinP1I	GCGC	4 cut(s)	239, 2647, 3276, 4559
HincII	GTYRAC	2 cut(s)	1402, 4704
HindII	GTYRAC	2 cut(s)	1402, 4704
HindIII	AAGCTT	4 cut(s)	1683, 1767, 3863, 4358
HpaI	GTTAAC	1 cut(s)	1402
HpaII	CCGG	6 cut(s)	274, 298, 749, 1273, 2217, 4715
HphI	GGTGA	8 cut(s)	19, 135, 2231, 2417, 2711, 3433, 3581, 4359
HpyCH4IV	ACGT	2 cut(s)	2042, 2443
HpySE526I	ACGT	2 cut(s)	2042, 2443
HspAI	GCGC	4 cut(s)	239, 2647, 3276, 4559
KflI	GGGWCCC	1 cut(s)	2077
Ksp22I	TGATCA	3 cut(s)	1164, 2773, 3337
KspAI	GTTAAC	1 cut(s)	1402
LguI	GCTCTTC	1 cut(s)	819
LmnI	GCTCC	6 cut(s)	185, 211, 1791, 3177, 3931, 4395
MabI	ACCWGGT	1 cut(s)	1926
MaeII	ACGT	2 cut(s)	2042, 2443
MfeI	CAATTG	6 cut(s)	222, 2013, 2730, 3333, 3471, 3576
MflI	RGATCY	7 cut(s)	1045, 1893, 2202, 3315, 3352, 4155, 4231
MhlI	GDGCHC	7 cut(s)	395, 665, 1796, 2464, 3182, 4356, 4553
MlsI	TGGCCA	2 cut(s)	2433, 3967
MluNI	TGGCCA	2 cut(s)	2433, 3967
MlyI	GAGTC	5 cut(s)	1344, 2762, 2979, 3581, 3938
MmeI	TCCRAC	3 cut(s)	1495, 2782, 3980
Mox20I	TGGCCA	2 cut(s)	2433, 3967
Mph1103I	ATGCAT	1 cut(s)	1311
MroXI	GAANNNNTTC	2 cut(s)	1522, 2295
MscI	TGGCCA	2 cut(s)	2433, 3967
MslI	CAYNNNNRTG	7 cut(s)	354, 720, 1386, 1463, 1781, 2312, 2724
Msp20I	TGGCCA	2 cut(s)	2433, 3967
MspA1I	CMGCKG	3 cut(s)	21, 539, 1814
MspCI	CTTAAG	3 cut(s)	857, 1673, 4439
MspI	CCGG	6 cut(s)	274, 298, 749, 1273, 2217, 4715
MunI	CAATTG	6 cut(s)	222, 2013, 2730, 3333, 3471, 3576
Mva1269I	GAATGC	2 cut(s)	3537, 4285
MvaI	CCWGG	8 cut(s)	1072, 1444, 1928, 2630, 3439, 4059, 4118, 4229
MvnI	CGCG	2 cut(s)	1883, 3276
NciI	CCSGG	2 cut(s)	274, 1273
NdeI	CATATG	3 cut(s)	1147, 1460, 3811
NlaIV	GGNNCC	9 cut(s)	1155, 1234, 1895, 2078, 2079, 2308, 3775, 4157, 4233
NmeAIII	GCCGAG	2 cut(s)	554, 628
NmuCI	GTSAC	5 cut(s)	742, 787, 1379, 1816, 2587
NruI	TCGCGA	1 cut(s)	1883
NsiI	ATGCAT	1 cut(s)	1311
NspI	RCATGY	2 cut(s)	1313, 3748
NspV	TTCGAA	2 cut(s)	329, 4522
OliI	CACNNNNGTG	1 cut(s)	1386
PaeI	GCATGC	1 cut(s)	3748
PagI	TCATGA	3 cut(s)	3624, 4195, 4294
PaqCI	CACCTGC	2 cut(s)	1850, 4136
PceI	AGGCCT	1 cut(s)	4121
PciSI	GCTCTTC	1 cut(s)	819
PctI	GAATGC	2 cut(s)	3537, 4285
PdmI	GAANNNNTTC	2 cut(s)	1522, 2295
PfeI	GAWTC	9 cut(s)	1977, 3025, 3100, 3296, 3322, 3634, 4018, 4264, 4364
PflMI	CCANNNNNTGG	2 cut(s)	3974, 4148
PleI	GAGTC	5 cut(s)	1344, 2762, 2978, 3580, 3938
PpsI	GAGTC	5 cut(s)	1344, 2762, 2978, 3580, 3938
PpuMI	RGGWCCY	2 cut(s)	1233, 2077
PshAI	GACNNNNGTC	2 cut(s)	2708, 3948
PsiI	TTATAA	1 cut(s)	1005
Psp124BI	GAGCTC	2 cut(s)	1796, 3182
Psp5II	RGGWCCY	2 cut(s)	1233, 2077
Psp6I	CCWGG	8 cut(s)	1070, 1442, 1926, 2628, 3437, 4057, 4116, 4227
PspEI	GGTNACC	1 cut(s)	862
PspFI	CCCAGC	3 cut(s)	881, 1229, 2073
PspGI	CCWGG	8 cut(s)	1070, 1442, 1926, 2628, 3437, 4057, 4116, 4227
PspN4I	GGNNCC	9 cut(s)	1155, 1234, 1895, 2078, 2079, 2308, 3775, 4157, 4233
PspPPI	RGGWCCY	2 cut(s)	1233, 2077
PstI	CTGCAG	3 cut(s)	1861, 3007, 3677
PstNI	CAGNNNCTG	1 cut(s)	2693
PsuI	RGATCY	7 cut(s)	1045, 1893, 2202, 3315, 3352, 4155, 4231
PvuII	CAGCTG	2 cut(s)	539, 1814
RruI	TCGCGA	1 cut(s)	1883
RsaI	GTAC	9 cut(s)	693, 1828, 1846, 2330, 2943, 3905, 4090, 4543, 4713
RsaNI	GTAC	9 cut(s)	692, 1827, 1845, 2329, 2942, 3904, 4089, 4542, 4712
RseI	CAYNNNNRTG	7 cut(s)	354, 720, 1386, 1463, 1781, 2312, 2724
SacI	GAGCTC	2 cut(s)	1796, 3182
SapI	GCTCTTC	1 cut(s)	819
SchI	GAGTC	5 cut(s)	1344, 2762, 2979, 3581, 3938
SduI	GDGCHC	7 cut(s)	395, 665, 1796, 2464, 3182, 4356, 4553
SexAI	ACCWGGT	1 cut(s)	1926
SfcI	CTRYAG	5 cut(s)	1857, 3003, 3673, 4026, 4554
SfuI	TTCGAA	2 cut(s)	329, 4522
SinI	GGWCC	5 cut(s)	1154, 1233, 2077, 2870, 3142
SmiI	ATTTAAAT	1 cut(s)	3825
SmiMI	CAYNNNNRTG	7 cut(s)	354, 720, 1386, 1463, 1781, 2312, 2724
SmlI	CTYRAG	6 cut(s)	857, 950, 1082, 1673, 3866, 4439
SmoI	CTYRAG	6 cut(s)	857, 950, 1082, 1673, 3866, 4439
SpeI	ACTAGT	2 cut(s)	1385, 2707
SphI	GCATGC	1 cut(s)	3748
SseBI	AGGCCT	1 cut(s)	4121
SsiI	CCGC	8 cut(s)	19, 277, 1657, 2920, 3274, 3587, 3794, 4062
SspI	AATATT	2 cut(s)	2296, 3054
SstI	GAGCTC	2 cut(s)	1796, 3182
StuI	AGGCCT	1 cut(s)	4121
StyI	CCWWGG	1 cut(s)	1620
SwaI	ATTTAAAT	1 cut(s)	3825
TaiI	ACGT	2 cut(s)	2045, 2446
TaqII	GACCGA	1 cut(s)	4178
TatI	WGTACW	5 cut(s)	691, 2328, 2941, 3903, 4541
TauI	GCSGC	1 cut(s)	3590
TfiI	GAWTC	9 cut(s)	1977, 3025, 3100, 3296, 3322, 3634, 4018, 4264, 4364
TscAI	CASTG	9 cut(s)	417, 1283, 1861, 2361, 2512, 2530, 2842, 4377, 4591
TseFI	GTSAC	5 cut(s)	742, 787, 1379, 1816, 2587
Tsp45I	GTSAC	5 cut(s)	742, 787, 1379, 1816, 2587
TspGWI	ACGGA	4 cut(s)	1146, 3328, 3721, 4331
TspRI	CASTG	9 cut(s)	417, 1283, 1861, 2361, 2512, 2530, 2842, 4377, 4591
Van91I	CCANNNNNTGG	2 cut(s)	3974, 4148
Vha464I	CTTAAG	3 cut(s)	857, 1673, 4439
VneI	GTGCAC	2 cut(s)	661, 4549
VpaK11BI	GGWCC	5 cut(s)	1154, 1233, 2077, 2870, 3142
XapI	RAATTY	9 cut(s)	372, 404, 1015, 1668, 1915, 2419, 2603, 3820, 3894
XbaI	TCTAGA	1 cut(s)	3226
XceI	RCATGY	2 cut(s)	1313, 3748
XmiI	GTMKAC	2 cut(s)	1338, 4567
XmnI	GAANNNNTTC	2 cut(s)	1522, 2295
Zsp2I	ATGCAT	1 cut(s)	1311

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.